Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
SDK1	221935	hgsc.bcm.edu	36	7	3968987	3968987	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RSPH10B	222967	hgsc.bcm.edu	36	7	6764015	6764015	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
HDAC9	9734	hgsc.bcm.edu	36	7	18841687	18841687	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZMIZ2	83637	hgsc.bcm.edu	36	7	44766686	44766686	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MRPS17	51373	hgsc.bcm.edu	36	7	55988415	55988415	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MAGI2	9863	hgsc.bcm.edu	36	7	77600150	77600150	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FZD1	8321	hgsc.bcm.edu	36	7	90734070	90734070	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
C7orf64	84060	hgsc.bcm.edu	36	7	92002187	92002187	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PTCD1	26024	hgsc.bcm.edu	36	7	98860476	98860476	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
AZGP1	563	hgsc.bcm.edu	36	7	99403865	99403865	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PILRB	29990	hgsc.bcm.edu	36	7	99795067	99795067	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RELN	5649	hgsc.bcm.edu	36	7	102911423	102911423	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RELN	5649	hgsc.bcm.edu	36	7	103021514	103021514	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
LRRN3	54674	hgsc.bcm.edu	36	7	110550475	110550475	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MET	8731	hgsc.bcm.edu	36	7	116204700	116204700	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
IQUB	154865	hgsc.bcm.edu	36	7	122930379	122930379	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CALU	813	hgsc.bcm.edu	36	7	128176068	128176068	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KIAA1549	57670	hgsc.bcm.edu	36	7	138253224	138253224	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
BRAF	673	hgsc.bcm.edu	36	7	140099656	140099656	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
EZH2	2146	hgsc.bcm.edu	36	7	148139725	148139725	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
EZH2	2146	hgsc.bcm.edu	36	7	148157803	148157803	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
UBE3C	9690	hgsc.bcm.edu	36	7	156649272	156649272	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DEFB128	245939	hgsc.bcm.edu	36	20	116611	116611	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TGM3	7053	hgsc.bcm.edu	36	20	2268522	2268522	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KIF16B	55614	hgsc.bcm.edu	36	20	16307607	16307607	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KIF16B	55614	hgsc.bcm.edu	36	20	16308333	16308333	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CRNKL1	51340	hgsc.bcm.edu	36	20	19976491	19976491	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MYH7B	57644	hgsc.bcm.edu	36	20	33045656	33045656	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TGM2	7052	hgsc.bcm.edu	36	20	36208688	36208688	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ARHGAP40	0	hgsc.bcm.edu	36	20	36691021	36691021	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PPP1R16B	26051	hgsc.bcm.edu	36	20	36898190	36898190	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TOMM34	10953	hgsc.bcm.edu	36	20	43005186	43005186	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SLC13A3	64849	hgsc.bcm.edu	36	20	44637644	44637644	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
EYA2	2139	hgsc.bcm.edu	36	20	45250173	45250173	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CCT8L2	150160	hgsc.bcm.edu	36	22	15452675	15452675	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DGCR2	9993	hgsc.bcm.edu	36	22	17406467	17406467	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PITPNB	23760	hgsc.bcm.edu	36	22	26622563	26622563	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
NF2	4771	hgsc.bcm.edu	36	22	28381597	28381597	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
NF2	4771	hgsc.bcm.edu	36	22	28394392	28394392	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PARVB	29780	hgsc.bcm.edu	36	22	42863691	42863691	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
WNT7B	7477	hgsc.bcm.edu	36	22	44724515	44724515	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KLHL33	123103	hgsc.bcm.edu	36	14	19966939	19966939	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ACIN1	22985	hgsc.bcm.edu	36	14	22619544	22619544	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DHRS4L1	728635	hgsc.bcm.edu	36	14	23575583	23575583	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PRKD1	5587	hgsc.bcm.edu	36	14	29177798	29177798	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MIA2	117153	hgsc.bcm.edu	36	14	38792191	38792191	+	Missense_Mutation	SNP	C	C	A	rs61735732	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PRKCH	5583	hgsc.bcm.edu	36	14	60987341	60987341	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
EIF2S1	1965	hgsc.bcm.edu	36	14	66901239	66901239	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
EXD2	55218	hgsc.bcm.edu	36	14	68771269	68771269	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
NRXN3	9369	hgsc.bcm.edu	36	14	79003379	79003379	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FOXN3	1112	hgsc.bcm.edu	36	14	88948278	88948278	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
BEGAIN	57596	hgsc.bcm.edu	36	14	100075004	100075004	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
AKT1	207	hgsc.bcm.edu	36	14	104317514	104317514	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TMEM146	257062	hgsc.bcm.edu	36	19	5719201	5719201	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MUC16	94025	hgsc.bcm.edu	36	19	8946172	8946172	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
OR7D2	162998	hgsc.bcm.edu	36	19	9157787	9157787	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZNF564	163050	hgsc.bcm.edu	36	19	12499452	12499452	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TPM4	7171	hgsc.bcm.edu	36	19	16065511	16065511	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CALR3	125972	hgsc.bcm.edu	36	19	16462365	16462365	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZFP82	284406	hgsc.bcm.edu	36	19	41576199	41576199	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CAPN12	147968	hgsc.bcm.edu	36	19	43922623	43922623	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PRX	57716	hgsc.bcm.edu	36	19	45594453	45594453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ADCK4	79934	hgsc.bcm.edu	36	19	45907862	45907862	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZNF227	7770	hgsc.bcm.edu	36	19	49424482	49424482	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PNMAL2	57469	hgsc.bcm.edu	36	19	51689312	51689312	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MEIS3	56917	hgsc.bcm.edu	36	19	52611880	52611880	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZNF473	25888	hgsc.bcm.edu	36	19	55241103	55241103	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZNF577	84765	hgsc.bcm.edu	36	19	57068424	57068424	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZNF671	79891	hgsc.bcm.edu	36	19	62924789	62924789	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MYOM2	9172	hgsc.bcm.edu	36	8	2007977	2007977	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CSMD1	64478	hgsc.bcm.edu	36	8	3254436	3254436	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CDCA2	157313	hgsc.bcm.edu	36	8	25420286	25420286	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CHRNA2	1135	hgsc.bcm.edu	36	8	27383287	27383287	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RB1CC1	9821	hgsc.bcm.edu	36	8	53717638	53717638	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RP1	10982	hgsc.bcm.edu	36	8	55696338	55696338	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZFAND1	79752	hgsc.bcm.edu	36	8	82789657	82789657	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PSKH2	85481	hgsc.bcm.edu	36	8	87145401	87145401	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PSKH2	85481	hgsc.bcm.edu	36	8	87145408	87145408	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
WWP1	11059	hgsc.bcm.edu	36	8	87462903	87462903	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
WWP1	11059	hgsc.bcm.edu	36	8	87462904	87462904	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MATN2	4147	hgsc.bcm.edu	36	8	99042908	99042908	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
COL14A1	7373	hgsc.bcm.edu	36	8	121336698	121336698	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MTSS1	9788	hgsc.bcm.edu	36	8	125637194	125637194	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
HHLA1	10086	hgsc.bcm.edu	36	8	133169163	133169163	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KCNQ3	3786	hgsc.bcm.edu	36	8	133211411	133211411	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SCRIB	23513	hgsc.bcm.edu	36	8	144963837	144963837	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GPAA1	8733	hgsc.bcm.edu	36	8	145211347	145211347	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CAMTA1	23261	hgsc.bcm.edu	36	1	7660281	7660281	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
EPHA8	2046	hgsc.bcm.edu	36	1	22775806	22775806	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ARID1A	8289	hgsc.bcm.edu	36	1	26978942	26978942	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
OPRD1	4985	hgsc.bcm.edu	36	1	29062157	29062157	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZMYM6	9204	hgsc.bcm.edu	36	1	35257620	35257620	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
NCDN	23154	hgsc.bcm.edu	36	1	35798589	35798589	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
C1orf113	79729	hgsc.bcm.edu	36	1	36558493	36558493	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SLFNL1	200172	hgsc.bcm.edu	36	1	41256259	41256259	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CCDC30	0	hgsc.bcm.edu	36	1	42804627	42804627	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
YBX1	4904	hgsc.bcm.edu	36	1	42939246	42939246	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TESK2	10420	hgsc.bcm.edu	36	1	45583631	45583631	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CYP4A22	284541	hgsc.bcm.edu	36	1	47386964	47386964	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
BEND5	79656	hgsc.bcm.edu	36	1	48966257	48966257	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ACOT11	26027	hgsc.bcm.edu	36	1	54837568	54837568	+	Missense_Mutation	SNP	G	G	A	rs2304303	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DEPDC1	55635	hgsc.bcm.edu	36	1	68721127	68721127	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
LRRC8C	84230	hgsc.bcm.edu	36	1	89951415	89951415	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ABCD3	5825	hgsc.bcm.edu	36	1	94702973	94702973	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DPYD	1806	hgsc.bcm.edu	36	1	97611750	97611750	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SLC16A4	9122	hgsc.bcm.edu	36	1	110721150	110721150	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
NRAS	4893	hgsc.bcm.edu	36	1	115058053	115058053	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
NOTCH2	4853	hgsc.bcm.edu	36	1	120260644	120260644	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
INTS3	65123	hgsc.bcm.edu	36	1	151991503	151991503	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KRTCAP2	200185	hgsc.bcm.edu	36	1	153408910	153408910	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MUC1	4582	hgsc.bcm.edu	36	1	153428692	153428692	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
AIM2	9447	hgsc.bcm.edu	36	1	157302499	157302499	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FAM78B	149297	hgsc.bcm.edu	36	1	164402016	164402016	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SLC19A2	10560	hgsc.bcm.edu	36	1	167701827	167701827	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SLC9A11	284525	hgsc.bcm.edu	36	1	171812446	171812446	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ANKRD45	339416	hgsc.bcm.edu	36	1	171845950	171845950	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
LAMC1	3915	hgsc.bcm.edu	36	1	181378499	181378499	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CFHR2	3080	hgsc.bcm.edu	36	1	195194679	195194679	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TRAF3IP3	80342	hgsc.bcm.edu	36	1	208000101	208000101	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RPS6KC1	26750	hgsc.bcm.edu	36	1	211502758	211502758	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
USH2A	7399	hgsc.bcm.edu	36	1	214030129	214030129	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
USH2A	7399	hgsc.bcm.edu	36	1	214439781	214439781	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
EPRS	2058	hgsc.bcm.edu	36	1	218241120	218241120	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
IARS2	55699	hgsc.bcm.edu	36	1	218377960	218377960	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
HLX	3142	hgsc.bcm.edu	36	1	219121182	219121182	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
C1orf198	84886	hgsc.bcm.edu	36	1	229045907	229045907	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KCNK1	3775	hgsc.bcm.edu	36	1	231869087	231869087	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MTR	4548	hgsc.bcm.edu	36	1	235119246	235119246	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RYR2	6262	hgsc.bcm.edu	36	1	236013746	236013746	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DEAF1	10522	hgsc.bcm.edu	36	11	676860	676860	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MUC6	4588	hgsc.bcm.edu	36	11	1021910	1021910	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
OR51T1	401665	hgsc.bcm.edu	36	11	4860129	4860129	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
HBD	100187828	hgsc.bcm.edu	36	11	5211942	5211942	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
COPB1	1315	hgsc.bcm.edu	36	11	14436673	14436673	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PLEKHA7	144100	hgsc.bcm.edu	36	11	16795386	16795386	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
WT1	7490	hgsc.bcm.edu	36	11	32374426	32374426	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CAT	10249	hgsc.bcm.edu	36	11	34439378	34439378	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
APIP	51074	hgsc.bcm.edu	36	11	34861492	34861492	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CTNND1	1500	hgsc.bcm.edu	36	11	57325906	57325906	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MUS81	80198	hgsc.bcm.edu	36	11	65387516	65387516	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CATSPER1	117144	hgsc.bcm.edu	36	11	65550225	65550225	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ARAP1	116985	hgsc.bcm.edu	36	11	72095950	72095950	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MAP6	4135	hgsc.bcm.edu	36	11	74994561	74994561	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KCTD14	65987	hgsc.bcm.edu	36	11	77405439	77405439	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FAT3	120114	hgsc.bcm.edu	36	11	92256196	92256196	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ATM	472	hgsc.bcm.edu	36	11	107658732	107658732	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ATM	472	hgsc.bcm.edu	36	11	107660344	107660344	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RANBP9	10048	hgsc.bcm.edu	36	6	13740689	13740689	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
C6orf132	647024	hgsc.bcm.edu	36	6	42218052	42218052	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PKHD1	5314	hgsc.bcm.edu	36	6	51840794	51840794	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
C6orf142	90523	hgsc.bcm.edu	36	6	54203609	54203609	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KHDRBS2	202559	hgsc.bcm.edu	36	6	62745963	62745963	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MDN1	23195	hgsc.bcm.edu	36	6	90468373	90468373	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MMS22L	0	hgsc.bcm.edu	36	6	97706418	97706418	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SOBP	55084	hgsc.bcm.edu	36	6	107931597	107931597	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MCM9	254394	hgsc.bcm.edu	36	6	119254666	119254666	+	Silent	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
C6orf170	221322	hgsc.bcm.edu	36	6	121673668	121673668	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
HIVEP2	3097	hgsc.bcm.edu	36	6	143132491	143132491	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZC3H12D	340152	hgsc.bcm.edu	36	6	149819638	149819638	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SYNE1	23345	hgsc.bcm.edu	36	6	152696963	152696963	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SYNE1	23345	hgsc.bcm.edu	36	6	152716487	152716487	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SYNE1	23345	hgsc.bcm.edu	36	6	152762513	152762513	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PLG	5340	hgsc.bcm.edu	36	6	161054129	161054129	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PLG	5340	hgsc.bcm.edu	36	6	161072247	161072247	+	Silent	SNP	C	C	T	rs4699	byHapMap	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RPS6KA2	6196	hgsc.bcm.edu	36	6	166763935	166763935	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RPS6KA2	6196	hgsc.bcm.edu	36	6	166832085	166832085	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PHF10	55274	hgsc.bcm.edu	36	6	169857848	169857848	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MPDU1	9526	hgsc.bcm.edu	36	17	7430002	7430002	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TP53	7157	hgsc.bcm.edu	36	17	7517863	7517863	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TP53	7157	hgsc.bcm.edu	36	17	7519180	7519180	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CENPV	201161	hgsc.bcm.edu	36	17	16188741	16188741	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DUSP14	11072	hgsc.bcm.edu	36	17	32946856	32946856	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
STAT3	6774	hgsc.bcm.edu	36	17	37735125	37735125	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
BRCA1	672	hgsc.bcm.edu	36	17	38498633	38498633	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SPAG9	9043	hgsc.bcm.edu	36	17	46427527	46427527	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SCPEP1	59342	hgsc.bcm.edu	36	17	52434518	52434518	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZACN	353174	hgsc.bcm.edu	36	17	71587014	71587014	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MGAT5B	146664	hgsc.bcm.edu	36	17	72389850	72389850	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SEC14L1	6397	hgsc.bcm.edu	36	17	72714050	72714050	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
USP25	29761	hgsc.bcm.edu	36	21	16072137	16072137	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
BACH1	83990	hgsc.bcm.edu	36	21	29636934	29636934	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GRIK1	2897	hgsc.bcm.edu	36	21	29967220	29967220	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KRTAP19-1	337882	hgsc.bcm.edu	36	21	30774354	30774354	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
URB1	9875	hgsc.bcm.edu	36	21	32647068	32647068	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
UMODL1	89766	hgsc.bcm.edu	36	21	42406941	42406941	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TRAF7	84231	hgsc.bcm.edu	36	16	2160722	2160722	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MGRN1	23295	hgsc.bcm.edu	36	16	4658287	4658287	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DCUN1D3	123879	hgsc.bcm.edu	36	16	20779060	20779060	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
IL4R	3566	hgsc.bcm.edu	36	16	27261042	27261042	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SRCAP	10847	hgsc.bcm.edu	36	16	30656368	30656368	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ABCC11	85320	hgsc.bcm.edu	36	16	46785296	46785296	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SALL1	6299	hgsc.bcm.edu	36	16	49731477	49731477	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RBL2	5934	hgsc.bcm.edu	36	16	52034202	52034202	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GINS3	64785	hgsc.bcm.edu	36	16	56996034	56996034	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CTCF	10664	hgsc.bcm.edu	36	16	66212116	66212116	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DDX28	55794	hgsc.bcm.edu	36	16	66613206	66613206	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PLA2G15	23659	hgsc.bcm.edu	36	16	66850632	66850632	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
COG8	84342	hgsc.bcm.edu	36	16	67925948	67925948	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CNTNAP4	85445	hgsc.bcm.edu	36	16	75081215	75081215	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SMAD4	4089	hgsc.bcm.edu	36	18	46845903	46845903	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CNTN6	27255	hgsc.bcm.edu	36	3	1400050	1400050	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
VHL	7428	hgsc.bcm.edu	36	3	10163256	10163256	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
VHL	7428	hgsc.bcm.edu	36	3	10163291	10163291	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TRANK1	0	hgsc.bcm.edu	36	3	36850013	36850013	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ULK4	54986	hgsc.bcm.edu	36	3	41948395	41948395	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
XCR1	2829	hgsc.bcm.edu	36	3	46038347	46038347	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PTPRG	5793	hgsc.bcm.edu	36	3	62117808	62117808	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
THOC7	80145	hgsc.bcm.edu	36	3	63795872	63795872	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
POU1F1	5449	hgsc.bcm.edu	36	3	87394004	87394004	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
EPHA6	285220	hgsc.bcm.edu	36	3	98188909	98188909	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
EPHA6	285220	hgsc.bcm.edu	36	3	98794236	98794236	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ST3GAL6	10402	hgsc.bcm.edu	36	3	99993426	99993426	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CBLB	868	hgsc.bcm.edu	36	3	106860538	106860538	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
COL6A5	256076	hgsc.bcm.edu	36	3	131590194	131590194	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
AADACL2	344752	hgsc.bcm.edu	36	3	152957599	152957599	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ARHGEF26	0	hgsc.bcm.edu	36	3	155323542	155323542	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GMPS	8833	hgsc.bcm.edu	36	3	157111679	157111679	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PIK3CA	5290	hgsc.bcm.edu	36	3	180434761	180434761	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FXR1	8087	hgsc.bcm.edu	36	3	182151846	182151846	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SST	6750	hgsc.bcm.edu	36	3	188869617	188869617	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MUC4	4585	hgsc.bcm.edu	36	3	196995302	196995302	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TFRC	7037	hgsc.bcm.edu	36	3	197283390	197283390	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
WNK1	65125	hgsc.bcm.edu	36	12	847394	847394	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DCP1B	196513	hgsc.bcm.edu	36	12	1972716	1972716	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KCNA1	3736	hgsc.bcm.edu	36	12	4891289	4891289	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZNF384	171017	hgsc.bcm.edu	36	12	6652749	6652749	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
LRRC23	10233	hgsc.bcm.edu	36	12	6885138	6885138	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CLEC7A	64581	hgsc.bcm.edu	36	12	10170528	10170528	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PRB1	5933	hgsc.bcm.edu	36	12	11398186	11398186	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PLEKHA5	54477	hgsc.bcm.edu	36	12	19176612	19176612	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SOX5	6660	hgsc.bcm.edu	36	12	23785168	23785168	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
OVCH1	341350	hgsc.bcm.edu	36	12	29519308	29519308	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
OVCH1	341350	hgsc.bcm.edu	36	12	29539532	29539532	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CNTN1	1272	hgsc.bcm.edu	36	12	39639210	39639210	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CNTN1	1272	hgsc.bcm.edu	36	12	39705229	39705229	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ADCY6	112	hgsc.bcm.edu	36	12	47451933	47451933	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MLL2	9757	hgsc.bcm.edu	36	12	47704911	47704911	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SMARCC2	6601	hgsc.bcm.edu	36	12	54849629	54849629	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
AGAP2	116986	hgsc.bcm.edu	36	12	56411689	56411689	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TPH2	121278	hgsc.bcm.edu	36	12	70674492	70674492	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
OSBPL8	114882	hgsc.bcm.edu	36	12	75317794	75317794	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
BTBD11	121551	hgsc.bcm.edu	36	12	106535253	106535253	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SELPLG	6404	hgsc.bcm.edu	36	12	107541149	107541149	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ATP2A2	488	hgsc.bcm.edu	36	12	109267569	109267569	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RPL6	6128	hgsc.bcm.edu	36	12	111330464	111330464	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KNTC1	9735	hgsc.bcm.edu	36	12	121621398	121621398	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KNTC1	9735	hgsc.bcm.edu	36	12	121621399	121621399	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GOLGA3	2802	hgsc.bcm.edu	36	12	131882696	131882696	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MKRN3	7681	hgsc.bcm.edu	36	15	21362235	21362235	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
OTUD7A	161725	hgsc.bcm.edu	36	15	29583190	29583190	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CASC5	57082	hgsc.bcm.edu	36	15	38703413	38703413	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TGM7	116179	hgsc.bcm.edu	36	15	41359158	41359158	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MAP1A	4130	hgsc.bcm.edu	36	15	41604607	41604607	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MYO5A	4644	hgsc.bcm.edu	36	15	50398584	50398584	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DENND4A	10260	hgsc.bcm.edu	36	15	63741266	63741266	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
BNC1	646	hgsc.bcm.edu	36	15	81726806	81726806	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SLC28A1	9154	hgsc.bcm.edu	36	15	83232071	83232071	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ABHD2	11057	hgsc.bcm.edu	36	15	87539503	87539503	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ARHGAP6	395	hgsc.bcm.edu	36	X	11182675	11182675	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
BMX	660	hgsc.bcm.edu	36	X	15450515	15450515	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PDHA1	5160	hgsc.bcm.edu	36	X	19277365	19277365	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SMPX	23676	hgsc.bcm.edu	36	X	21665690	21665690	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DMD	1756	hgsc.bcm.edu	36	X	31748078	31748078	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
USP9X	8239	hgsc.bcm.edu	36	X	40940922	40940922	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
USP9X	8239	hgsc.bcm.edu	36	X	40942783	40942783	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZNF41	7592	hgsc.bcm.edu	36	X	47192031	47192031	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SMC1A	8243	hgsc.bcm.edu	36	X	53453085	53453085	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PHF8	23133	hgsc.bcm.edu	36	X	54085947	54085947	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FOXO4	4303	hgsc.bcm.edu	36	X	70237411	70237411	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
HDAC8	55869	hgsc.bcm.edu	36	X	71704597	71704597	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZCCHC5	203430	hgsc.bcm.edu	36	X	77799794	77799794	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TBX22	50945	hgsc.bcm.edu	36	X	79164485	79164485	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TBX22	50945	hgsc.bcm.edu	36	X	79170217	79170217	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
BRWD3	254065	hgsc.bcm.edu	36	X	79819057	79819057	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
HDX	139324	hgsc.bcm.edu	36	X	83610966	83610966	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GPRASP1	9737	hgsc.bcm.edu	36	X	101797503	101797503	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
IGSF1	3547	hgsc.bcm.edu	36	X	130244861	130244861	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GPR112	139378	hgsc.bcm.edu	36	X	135232692	135232692	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FGF13	2258	hgsc.bcm.edu	36	X	137620808	137620808	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MAMLD1	10046	hgsc.bcm.edu	36	X	149422313	149422313	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
WHSC2	7469	hgsc.bcm.edu	36	4	1955403	1955403	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CC2D2A	57545	hgsc.bcm.edu	36	4	15211983	15211983	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KLHL5	51088	hgsc.bcm.edu	36	4	38785734	38785734	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
WDR19	57728	hgsc.bcm.edu	36	4	38863796	38863796	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FRYL	285527	hgsc.bcm.edu	36	4	48196383	48196383	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KIT	3815	hgsc.bcm.edu	36	4	55256460	55256460	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
EXOC1	55763	hgsc.bcm.edu	36	4	56460792	56460792	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
NUP54	53371	hgsc.bcm.edu	36	4	77270861	77270861	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
WDFY3	23001	hgsc.bcm.edu	36	4	85861719	85861719	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FAT4	79633	hgsc.bcm.edu	36	4	126461251	126461251	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
NAA15	0	hgsc.bcm.edu	36	4	140491848	140491848	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SMAD1	4086	hgsc.bcm.edu	36	4	146683300	146683300	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MAB21L2	10586	hgsc.bcm.edu	36	4	151724214	151724214	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FBXW7	55294	hgsc.bcm.edu	36	4	153466739	153466739	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GUCY1B3	2983	hgsc.bcm.edu	36	4	156940548	156940548	+	Silent	SNP	G	G	A	rs17854507	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SPOCK3	50859	hgsc.bcm.edu	36	4	167949956	167949956	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DDX60L	91351	hgsc.bcm.edu	36	4	169581491	169581491	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SOX11	6664	hgsc.bcm.edu	36	2	5751483	5751483	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TRIB2	28951	hgsc.bcm.edu	36	2	12781121	12781121	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KCNS3	3790	hgsc.bcm.edu	36	2	17976258	17976258	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
NRBP1	29959	hgsc.bcm.edu	36	2	27509665	27509665	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
BIRC6	57448	hgsc.bcm.edu	36	2	32493924	32493924	+	Silent	SNP	C	C	T	rs3769599	byCluster;byFrequency;byHapMap	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
LTBP1	4052	hgsc.bcm.edu	36	2	33267296	33267296	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SULT6B1	391365	hgsc.bcm.edu	36	2	37252190	37252190	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MTA3	57504	hgsc.bcm.edu	36	2	42784895	42784895	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TSPYL6	388951	hgsc.bcm.edu	36	2	54336313	54336313	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CD207	50489	hgsc.bcm.edu	36	2	70916387	70916387	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ALMS1	7840	hgsc.bcm.edu	36	2	73639773	73639773	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MAP4K4	9448	hgsc.bcm.edu	36	2	101870758	101870758	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SEPT10	151011	hgsc.bcm.edu	36	2	109660975	109660975	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GLI2	2736	hgsc.bcm.edu	36	2	121464402	121464402	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CYTIP	9595	hgsc.bcm.edu	36	2	157980773	157980773	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SLC4A10	57282	hgsc.bcm.edu	36	2	162427761	162427761	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TTC21B	79809	hgsc.bcm.edu	36	2	166477374	166477374	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TTC21B	79809	hgsc.bcm.edu	36	2	166494934	166494934	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SCN9A	6335	hgsc.bcm.edu	36	2	166816553	166816553	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SCN9A	6335	hgsc.bcm.edu	36	2	166870561	166870561	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
LRP2	4036	hgsc.bcm.edu	36	2	169752905	169752905	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MYO3B	140469	hgsc.bcm.edu	36	2	170972551	170972551	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TTN	7273	hgsc.bcm.edu	36	2	179180068	179180068	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TTN	7273	hgsc.bcm.edu	36	2	179197673	179197673	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ITGA4	3676	hgsc.bcm.edu	36	2	182068839	182068839	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TFPI	7035	hgsc.bcm.edu	36	2	188057889	188057889	+	Nonsense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TMEFF2	23671	hgsc.bcm.edu	36	2	192767395	192767395	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FASTKD2	22868	hgsc.bcm.edu	36	2	207359725	207359725	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MAP2	10988	hgsc.bcm.edu	36	2	210268820	210268820	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ABCB6	10058	hgsc.bcm.edu	36	2	219782952	219782952	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
WDR69	164781	hgsc.bcm.edu	36	2	228462830	228462830	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ANKMY1	51281	hgsc.bcm.edu	36	2	241112221	241112221	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ANO7	50636	hgsc.bcm.edu	36	2	241800247	241800247	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DOCK8	81704	hgsc.bcm.edu	36	9	453547	453547	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CD274	29126	hgsc.bcm.edu	36	9	5456799	5456799	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
UNC13B	10497	hgsc.bcm.edu	36	9	35393795	35393795	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RORB	6096	hgsc.bcm.edu	36	9	76447454	76447454	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TLE4	7091	hgsc.bcm.edu	36	9	81509548	81509548	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
WNK2	65268	hgsc.bcm.edu	36	9	95070809	95070809	+	Silent	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TDRD7	23424	hgsc.bcm.edu	36	9	99297811	99297811	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ABCA1	19	hgsc.bcm.edu	36	9	106631166	106631166	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PPP2R4	5524	hgsc.bcm.edu	36	9	130931115	130931115	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PRRC2B	0	hgsc.bcm.edu	36	9	133340122	133340122	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RAPGEF1	2889	hgsc.bcm.edu	36	9	133516106	133516106	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RALGDS	5900	hgsc.bcm.edu	36	9	134974005	134974005	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
NOTCH1	4851	hgsc.bcm.edu	36	9	138520869	138520869	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FLT3	2322	hgsc.bcm.edu	36	13	27506125	27506125	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
DGKH	160851	hgsc.bcm.edu	36	13	41667138	41667138	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
C13orf30	144809	hgsc.bcm.edu	36	13	42258902	42258902	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KIAA1704	55425	hgsc.bcm.edu	36	13	44492544	44492544	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CPB2	1361	hgsc.bcm.edu	36	13	45530426	45530426	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SERPINE3	647174	hgsc.bcm.edu	36	13	50816522	50816522	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PCDH20	64881	hgsc.bcm.edu	36	13	60885065	60885065	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MYCBP2	23077	hgsc.bcm.edu	36	13	76598456	76598456	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
OXGR1	27199	hgsc.bcm.edu	36	13	96437260	96437260	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
C13orf40	0	hgsc.bcm.edu	36	13	102198695	102198695	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
UCMA	221044	hgsc.bcm.edu	36	10	13316223	13316223	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
C10orf68	79741	hgsc.bcm.edu	36	10	33040622	33040622	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RET	5979	hgsc.bcm.edu	36	10	42933845	42933845	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ALOX5	240	hgsc.bcm.edu	36	10	45240438	45240438	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
AGAP7	653268	hgsc.bcm.edu	36	10	51135495	51135495	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PTEN	5728	hgsc.bcm.edu	36	10	89643841	89643841	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PTEN	5728	hgsc.bcm.edu	36	10	89680816	89680816	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CC2D2B	387707	hgsc.bcm.edu	36	10	97781668	97781668	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PDCD4	27250	hgsc.bcm.edu	36	10	112631274	112631274	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
VTI1A	143187	hgsc.bcm.edu	36	10	114565098	114565098	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
AHRR	57491	hgsc.bcm.edu	36	5	487665	487665	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SLC12A7	10723	hgsc.bcm.edu	36	5	1128559	1128559	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PRLR	5618	hgsc.bcm.edu	36	5	35101808	35101808	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TRIM23	373	hgsc.bcm.edu	36	5	64940958	64940958	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PIK3R1	5295	hgsc.bcm.edu	36	5	67625376	67625376	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GPR98	84059	hgsc.bcm.edu	36	5	90017396	90017396	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
APC	324	hgsc.bcm.edu	36	5	112203172	112203172	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
APC	324	hgsc.bcm.edu	36	5	112203379	112203379	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FEM1C	56929	hgsc.bcm.edu	36	5	114888457	114888457	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PKD2L2	27039	hgsc.bcm.edu	36	5	137271346	137271346	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PCDHA3	56145	hgsc.bcm.edu	36	5	140161494	140161494	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PCDHA6	56142	hgsc.bcm.edu	36	5	140190062	140190062	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PCDHA8	56140	hgsc.bcm.edu	36	5	140202386	140202386	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
PCDHB8	56128	hgsc.bcm.edu	36	5	140539356	140539356	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
KCTD16	57528	hgsc.bcm.edu	36	5	143833706	143833706	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MAPK9	5601	hgsc.bcm.edu	36	5	179628970	179628970	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SLC23A2	9963	hgsc.bcm.edu	36	20	4788031	4788031	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GPR83	10888	hgsc.bcm.edu	36	11	93766298	93766298	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RNF4	6047	hgsc.bcm.edu	36	4	2472264	2472264	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
SCLY	51540	hgsc.bcm.edu	36	2	238667798	238667798	+	Splice_Site	SNP	A	A	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
NBEA	26960	hgsc.bcm.edu	36	13	34704757	34704757	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ADAMTSL4	54507	hgsc.bcm.edu	36	1	148792857	148792869	+	Frame_Shift_Del	DEL	CAGGCCTCTGGCA	CAGGCCTCTGGCA	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	CAGGCCTCTGGCA	CAGGCCTCTGGCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RRM2	6241	hgsc.bcm.edu	36	2	10182390	10182392	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	TCT	TCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944292	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
ZNF717	100131827	hgsc.bcm.edu	36	3	75869005	75869013	+	In_Frame_Del	DEL	CTACATTCT	CTACATTCT	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	CTACATTCT	CTACATTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MFSD10	10227	hgsc.bcm.edu	36	4	2902466	2902467	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
FSTL5	56884	hgsc.bcm.edu	36	4	162640645	162640645	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TMEM184A	202915	hgsc.bcm.edu	36	7	1553179	1553180	+	In_Frame_Ins	INS	-	-	GCC	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RP1L1	94137	hgsc.bcm.edu	36	8	10504927	10504928	+	Frame_Shift_Del	DEL	CC	CC	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	CC	CC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RP1L1	94137	hgsc.bcm.edu	36	8	10504930	10504930	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RP1L1	94137	hgsc.bcm.edu	36	8	10504937	10504937	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RP1L1	94137	hgsc.bcm.edu	36	8	10504939	10504940	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	TC	TC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RP1L1	94137	hgsc.bcm.edu	36	8	10505081	10505083	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	CTC	CTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RP1L1	94137	hgsc.bcm.edu	36	8	10505091	10505096	+	In_Frame_Del	DEL	TCCTTC	TCCTTC	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	TCCTTC	TCCTTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
RP1L1	94137	hgsc.bcm.edu	36	8	10505116	10505117	+	In_Frame_Ins	INS	-	-	CCC	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
C9orf144B	259308	hgsc.bcm.edu	36	9	34716310	34716310	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
AKAP2	445815	hgsc.bcm.edu	36	9	111940162	111940163	+	In_Frame_Ins	INS	-	-	GAAGCT	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
GPRIN2	9721	hgsc.bcm.edu	36	10	46419597	46419598	+	In_Frame_Ins	INS	-	-	ATGAGGGAG	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
TFAM	7019	hgsc.bcm.edu	36	10	59818576	59818576	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
OR6C76	390326	hgsc.bcm.edu	36	12	54107226	54107226	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
C14orf177	283598	hgsc.bcm.edu	36	14	98252280	98252288	+	Frame_Shift_Del	DEL	GGATGCATC	GGATGCATC	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	GGATGCATC	GGATGCATC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
CLASRP	0	hgsc.bcm.edu	36	19	50263110	50263119	+	In_Frame_Del	DEL	CAGGACCGAA	CAGGACCGAA	-	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	CAGGACCGAA	CAGGACCGAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
MYBL2	4605	hgsc.bcm.edu	36	20	41743895	41743896	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5864-01A-01D-1650-10	TCGA-CM-5864-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9091e0eb-afab-4f28-a0de-898ba3680267	7cc17cb8-d6e4-4728-957e-722945601b52
