Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
CARD11	84433	hgsc.bcm.edu	36	7	2943336	2943336	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
WIPI2	26100	hgsc.bcm.edu	36	7	5205799	5205799	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KDELR2	11014	hgsc.bcm.edu	36	7	6469327	6469327	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RAPGEF5	9771	hgsc.bcm.edu	36	7	22131793	22131793	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GPNMB	10457	hgsc.bcm.edu	36	7	23260418	23260418	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FKBP9	11328	hgsc.bcm.edu	36	7	32994764	32994764	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SPDYE1	285955	hgsc.bcm.edu	36	7	44013459	44013459	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ADCY1	107	hgsc.bcm.edu	36	7	45714514	45714514	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ARPC1A	10552	hgsc.bcm.edu	36	7	98795210	98795210	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RELN	5649	hgsc.bcm.edu	36	7	102911423	102911423	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MET	8731	hgsc.bcm.edu	36	7	116204701	116204701	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
IQUB	154865	hgsc.bcm.edu	36	7	122939368	122939368	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
LRRC4	64101	hgsc.bcm.edu	36	7	127456131	127456131	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FAM180A	389558	hgsc.bcm.edu	36	7	135069554	135069554	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
HIPK2	28996	hgsc.bcm.edu	36	7	138919245	138919245	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
BRAF	673	hgsc.bcm.edu	36	7	140099603	140099603	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZNF777	27153	hgsc.bcm.edu	36	7	148783280	148783280	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ABP1	28988	hgsc.bcm.edu	36	7	150185488	150185488	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MLL3	58508	hgsc.bcm.edu	36	7	151510057	151510057	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
WDR60	55112	hgsc.bcm.edu	36	7	158356837	158356837	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SMOX	54498	hgsc.bcm.edu	36	20	4103802	4103802	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CDS2	8760	hgsc.bcm.edu	36	20	5105344	5105344	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RPN2	6185	hgsc.bcm.edu	36	20	35294120	35294120	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CTNNBL1	56259	hgsc.bcm.edu	36	20	35799217	35799217	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CTNNBL1	56259	hgsc.bcm.edu	36	20	35829849	35829849	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DHX35	60625	hgsc.bcm.edu	36	20	37045800	37045800	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DHX35	60625	hgsc.bcm.edu	36	20	37063819	37063819	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CHD6	84181	hgsc.bcm.edu	36	20	39487435	39487435	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
L3MBTL1	26013	hgsc.bcm.edu	36	20	41577135	41577135	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TOX2	84969	hgsc.bcm.edu	36	20	42127984	42127984	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SLC35C2	51006	hgsc.bcm.edu	36	20	44417896	44417896	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
VAPB	9217	hgsc.bcm.edu	36	20	56449529	56449529	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SYCP2	10388	hgsc.bcm.edu	36	20	57924988	57924988	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NTSR1	4923	hgsc.bcm.edu	36	20	60862048	60862048	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KLHL22	84861	hgsc.bcm.edu	36	22	19173447	19173447	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MTMR3	8897	hgsc.bcm.edu	36	22	28728973	28728973	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MYH9	4627	hgsc.bcm.edu	36	22	35027626	35027626	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
EP300	2033	hgsc.bcm.edu	36	22	39878199	39878199	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PPARA	5465	hgsc.bcm.edu	36	22	45006785	45006785	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PKDREJ	10343	hgsc.bcm.edu	36	22	45032261	45032261	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RNASE9	390443	hgsc.bcm.edu	36	14	20094608	20094608	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RNASE11	122651	hgsc.bcm.edu	36	14	20121955	20121955	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
LRRC16B	90668	hgsc.bcm.edu	36	14	23599981	23599981	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
AKAP6	9472	hgsc.bcm.edu	36	14	32361330	32361330	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
WDHD1	11169	hgsc.bcm.edu	36	14	54493669	54493669	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SPTB	6710	hgsc.bcm.edu	36	14	64329950	64329950	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ANGEL1	23357	hgsc.bcm.edu	36	14	76325377	76325377	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TSHR	7253	hgsc.bcm.edu	36	14	80679161	80679161	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TSHR	7253	hgsc.bcm.edu	36	14	80680011	80680011	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DYNC1H1	1778	hgsc.bcm.edu	36	14	101511877	101511877	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ACSBG2	81616	hgsc.bcm.edu	36	19	6128319	6128319	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MUC16	94025	hgsc.bcm.edu	36	19	8935563	8935563	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
S1PR5	53637	hgsc.bcm.edu	36	19	10485866	10485866	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
OR10H5	284433	hgsc.bcm.edu	36	19	15765980	15765980	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ANO8	57719	hgsc.bcm.edu	36	19	17296903	17296903	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
JAK3	3718	hgsc.bcm.edu	36	19	17814856	17814856	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
HAMP	57817	hgsc.bcm.edu	36	19	40467768	40467768	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NPHS1	4868	hgsc.bcm.edu	36	19	41024938	41024938	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZNF570	148268	hgsc.bcm.edu	36	19	42658675	42658675	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FBXO17	115290	hgsc.bcm.edu	36	19	44127453	44127453	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GPR4	2828	hgsc.bcm.edu	36	19	50785888	50785888	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CNOT3	4849	hgsc.bcm.edu	36	19	59349276	59349276	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZNF583	147949	hgsc.bcm.edu	36	19	61627395	61627395	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZNF211	10520	hgsc.bcm.edu	36	19	62836527	62836527	+	Missense_Mutation	SNP	A	A	G	rs9749449	by2Hit2Allele;byFrequency;byHapMap	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DLC1	10395	hgsc.bcm.edu	36	8	13401242	13401242	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CYP7A1	1581	hgsc.bcm.edu	36	8	59571927	59571927	+	Missense_Mutation	SNP	T	T	C	rs8192874	byCluster;byFrequency;byHapMap	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KCNB2	9312	hgsc.bcm.edu	36	8	74011715	74011715	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CNBD1	168975	hgsc.bcm.edu	36	8	87947926	87947926	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RIMS2	9699	hgsc.bcm.edu	36	8	104997936	104997936	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ABRA	137735	hgsc.bcm.edu	36	8	107842761	107842761	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NUDCD1	84955	hgsc.bcm.edu	36	8	110362554	110362554	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PKHD1L1	93035	hgsc.bcm.edu	36	8	110543250	110543250	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TMEM71	137835	hgsc.bcm.edu	36	8	133833241	133833241	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TG	7038	hgsc.bcm.edu	36	8	133969908	133969908	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FLJ43860	389690	hgsc.bcm.edu	36	8	142519555	142519555	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SLC39A4	55630	hgsc.bcm.edu	36	8	145612888	145612888	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZNF16	7564	hgsc.bcm.edu	36	8	146128672	146128672	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TAS1R3	83756	hgsc.bcm.edu	36	1	1258321	1258321	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CHD5	450091	hgsc.bcm.edu	36	1	6150870	6150870	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CELA2B	51032	hgsc.bcm.edu	36	1	15682383	15682383	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SPEN	64783	hgsc.bcm.edu	36	1	16130808	16130808	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KIAA0090	23065	hgsc.bcm.edu	36	1	19421794	19421794	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MYOM3	127294	hgsc.bcm.edu	36	1	24256551	24256551	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
C1orf201	90529	hgsc.bcm.edu	36	1	24583008	24583008	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ARID1A	8289	hgsc.bcm.edu	36	1	26928833	26928833	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SLC2A1	6513	hgsc.bcm.edu	36	1	43165951	43165951	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NASP	4678	hgsc.bcm.edu	36	1	45840579	45840579	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
LPPR4	9890	hgsc.bcm.edu	36	1	99544383	99544383	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
COL11A1	1301	hgsc.bcm.edu	36	1	103177216	103177216	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
VAV3	10451	hgsc.bcm.edu	36	1	107986825	107986825	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FLG	2312	hgsc.bcm.edu	36	1	150543539	150543539	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PBXIP1	57326	hgsc.bcm.edu	36	1	153184164	153184164	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RHBG	57127	hgsc.bcm.edu	36	1	154618326	154618326	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
INSRR	3645	hgsc.bcm.edu	36	1	155082176	155082176	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FCRL3	115352	hgsc.bcm.edu	36	1	155915183	155915183	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
OR10J3	441911	hgsc.bcm.edu	36	1	157550272	157550272	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PVRL4	81607	hgsc.bcm.edu	36	1	159309175	159309175	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PVRL4	81607	hgsc.bcm.edu	36	1	159311138	159311138	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
UFC1	51506	hgsc.bcm.edu	36	1	159394878	159394878	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
BPNT1	10380	hgsc.bcm.edu	36	1	218307313	218307313	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DNAH14	127602	hgsc.bcm.edu	36	1	223591592	223591592	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NID1	4811	hgsc.bcm.edu	36	1	234211655	234211655	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
VN1R5	317705	hgsc.bcm.edu	36	1	245486964	245486964	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
OR2G6	391211	hgsc.bcm.edu	36	1	246752149	246752149	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MUC2	4583	hgsc.bcm.edu	36	11	1082996	1082996	+	Silent	SNP	C	C	A	rs61724525	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TRIM34	445372	hgsc.bcm.edu	36	11	5610317	5610317	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RIC3	79608	hgsc.bcm.edu	36	11	8088972	8088972	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TNKS1BP1	85456	hgsc.bcm.edu	36	11	56836924	56836924	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
OR9I1	219954	hgsc.bcm.edu	36	11	57643251	57643251	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
OR4D10	390197	hgsc.bcm.edu	36	11	59001505	59001505	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SLC22A6	9356	hgsc.bcm.edu	36	11	62501231	62501231	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
LGALS12	85329	hgsc.bcm.edu	36	11	63033930	63033930	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SF1	7536	hgsc.bcm.edu	36	11	64300623	64300623	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CATSPER1	117144	hgsc.bcm.edu	36	11	65541151	65541151	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SPTBN2	6712	hgsc.bcm.edu	36	11	66232981	66232981	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KRTAP5-7	440050	hgsc.bcm.edu	36	11	70916228	70916228	+	Silent	SNP	C	C	T	rs12271719	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
INTS4	92105	hgsc.bcm.edu	36	11	77349754	77349754	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GAB2	9846	hgsc.bcm.edu	36	11	77615511	77615511	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TRIM49	57093	hgsc.bcm.edu	36	11	89177147	89177147	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
BIRC3	330	hgsc.bcm.edu	36	11	101700817	101700817	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MMP27	64066	hgsc.bcm.edu	36	11	102078698	102078698	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MMP27	64066	hgsc.bcm.edu	36	11	102078700	102078700	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CASP1	834	hgsc.bcm.edu	36	11	104406279	104406279	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GRIA4	2893	hgsc.bcm.edu	36	11	105274335	105274335	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CWF19L2	143884	hgsc.bcm.edu	36	11	106792210	106792210	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ATM	472	hgsc.bcm.edu	36	11	107741425	107741425	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
POU2AF1	5450	hgsc.bcm.edu	36	11	110730332	110730332	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CADM1	23705	hgsc.bcm.edu	36	11	114552497	114552497	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SIK3	23387	hgsc.bcm.edu	36	11	116239699	116239699	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
HIST1H1A	3024	hgsc.bcm.edu	36	6	26125577	26125577	+	Silent	SNP	G	G	A	rs34877685	byCluster;byFrequency	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
HIST1H2BC	8347	hgsc.bcm.edu	36	6	26232085	26232085	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DPCR1	135656	hgsc.bcm.edu	36	6	31026787	31026787	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DAXX	1616	hgsc.bcm.edu	36	6	33395888	33395888	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
UBR2	23304	hgsc.bcm.edu	36	6	42681509	42681509	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GPR111	222611	hgsc.bcm.edu	36	6	47757124	47757124	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TFAP2D	83741	hgsc.bcm.edu	36	6	50826952	50826952	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TFAP2D	83741	hgsc.bcm.edu	36	6	50848419	50848419	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
BAI3	577	hgsc.bcm.edu	36	6	70127961	70127961	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CD109	135228	hgsc.bcm.edu	36	6	74532428	74532428	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CD109	135228	hgsc.bcm.edu	36	6	74574677	74574677	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZNF292	23036	hgsc.bcm.edu	36	6	88028183	88028183	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
BACH2	60468	hgsc.bcm.edu	36	6	90698884	90698884	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SIM1	6492	hgsc.bcm.edu	36	6	100945523	100945523	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PDSS2	57107	hgsc.bcm.edu	36	6	107702082	107702082	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
LAMA2	3908	hgsc.bcm.edu	36	6	129870371	129870371	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
AHI1	54806	hgsc.bcm.edu	36	6	135686033	135686033	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TNFAIP3	7128	hgsc.bcm.edu	36	6	138241271	138241271	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KIAA1244	57221	hgsc.bcm.edu	36	6	138649620	138649620	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MAP3K4	4216	hgsc.bcm.edu	36	6	161439371	161439371	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FRMD1	79981	hgsc.bcm.edu	36	6	168204476	168204476	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FAM120B	84498	hgsc.bcm.edu	36	6	170468650	170468650	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TP53	7157	hgsc.bcm.edu	36	17	7517819	7517819	+	Missense_Mutation	SNP	G	G	A	rs28934574	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FBXW10	10517	hgsc.bcm.edu	36	17	18593804	18593804	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KRTAP9-3	83900	hgsc.bcm.edu	36	17	36642507	36642507	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KLHL10	317719	hgsc.bcm.edu	36	17	37251791	37251791	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KAT2A	2648	hgsc.bcm.edu	36	17	37519292	37519292	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MAP2K6	5608	hgsc.bcm.edu	36	17	65031264	65031264	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
C17orf28	283987	hgsc.bcm.edu	36	17	70459292	70459292	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DNAH17	8632	hgsc.bcm.edu	36	17	73999187	73999187	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
C21orf33	8209	hgsc.bcm.edu	36	21	44380437	44380437	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KRTAP10-12	386685	hgsc.bcm.edu	36	21	44941670	44941670	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NUBP1	10101	hgsc.bcm.edu	36	16	10769354	10769354	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CIITA	4261	hgsc.bcm.edu	36	16	10908261	10908261	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DNAH3	55567	hgsc.bcm.edu	36	16	20988396	20988396	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
VWA3A	146177	hgsc.bcm.edu	36	16	22037782	22037782	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ATXN2L	11273	hgsc.bcm.edu	36	16	28749439	28749439	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ALDOA	226	hgsc.bcm.edu	36	16	29986140	29986140	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SRCAP	10847	hgsc.bcm.edu	36	16	30639696	30639696	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RSPRY1	89970	hgsc.bcm.edu	36	16	55826551	55826551	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CSNK2A2	1459	hgsc.bcm.edu	36	16	56758650	56758650	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NAE1	8883	hgsc.bcm.edu	36	16	65400416	65400416	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NFATC3	4775	hgsc.bcm.edu	36	16	66749292	66749292	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TAT	6898	hgsc.bcm.edu	36	16	70167811	70167811	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZFHX3	463	hgsc.bcm.edu	36	16	71388112	71388112	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ANKRD11	29123	hgsc.bcm.edu	36	16	87882449	87882449	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NDC80	10403	hgsc.bcm.edu	36	18	2568079	2568079	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SMAD4	4089	hgsc.bcm.edu	36	18	46847555	46847555	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
VHL	7428	hgsc.bcm.edu	36	3	10166643	10166643	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MLH1	4292	hgsc.bcm.edu	36	3	37013204	37013204	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CCR9	10803	hgsc.bcm.edu	36	3	45918253	45918253	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FYCO1	79443	hgsc.bcm.edu	36	3	45984727	45984727	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CCR5	1234	hgsc.bcm.edu	36	3	46389951	46389951	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DHX30	22907	hgsc.bcm.edu	36	3	47863809	47863809	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RNF123	63891	hgsc.bcm.edu	36	3	49714840	49714840	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SEMA3F	6405	hgsc.bcm.edu	36	3	50200338	50200338	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
VPRBP	9730	hgsc.bcm.edu	36	3	51480045	51480045	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ARHGEF3	50650	hgsc.bcm.edu	36	3	56746317	56746317	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ADAMTS9	56999	hgsc.bcm.edu	36	3	64522389	64522389	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZNF717	100131827	hgsc.bcm.edu	36	3	75873522	75873522	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ROBO1	6091	hgsc.bcm.edu	36	3	78820586	78820586	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GPR128	84873	hgsc.bcm.edu	36	3	101811444	101811444	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CBLB	868	hgsc.bcm.edu	36	3	106883278	106883278	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CD47	961	hgsc.bcm.edu	36	3	109281705	109281705	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
IFT57	55081	hgsc.bcm.edu	36	3	109420954	109420954	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MORC1	27136	hgsc.bcm.edu	36	3	110206789	110206789	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
BOC	91653	hgsc.bcm.edu	36	3	114452142	114452142	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GSK3B	2932	hgsc.bcm.edu	36	3	121117651	121117651	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RPN1	6184	hgsc.bcm.edu	36	3	129852150	129852150	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ISY1	339122	hgsc.bcm.edu	36	3	130335677	130335677	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
COPG	22820	hgsc.bcm.edu	36	3	130470128	130470128	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PLXND1	23129	hgsc.bcm.edu	36	3	130772364	130772364	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PLSCR5	389158	hgsc.bcm.edu	36	3	147790177	147790177	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GYG1	2992	hgsc.bcm.edu	36	3	150209816	150209816	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KCNMB2	27094	hgsc.bcm.edu	36	3	180043260	180043260	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
YEATS2	55689	hgsc.bcm.edu	36	3	184922453	184922453	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FGF12	2257	hgsc.bcm.edu	36	3	193608539	193608539	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MUC4	4585	hgsc.bcm.edu	36	3	196993289	196993289	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CACNA1C	775	hgsc.bcm.edu	36	12	2428511	2428511	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CLEC7A	64581	hgsc.bcm.edu	36	12	10170528	10170528	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TAS2R10	50839	hgsc.bcm.edu	36	12	10869364	10869364	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KIAA1467	57613	hgsc.bcm.edu	36	12	13099948	13099948	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SLCO1A2	6579	hgsc.bcm.edu	36	12	21363118	21363118	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ETNK1	55500	hgsc.bcm.edu	36	12	22729149	22729149	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
LRRK2	120892	hgsc.bcm.edu	36	12	38994152	38994152	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CCDC65	85478	hgsc.bcm.edu	36	12	47601484	47601484	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GALNT6	11226	hgsc.bcm.edu	36	12	50034493	50034493	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KRT2	3849	hgsc.bcm.edu	36	12	51327830	51327830	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
HOXC5	3222	hgsc.bcm.edu	36	12	52713180	52713180	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NCKAP1L	3071	hgsc.bcm.edu	36	12	53216269	53216269	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
OR6C6	283365	hgsc.bcm.edu	36	12	53974463	53974463	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GRIP1	85329	hgsc.bcm.edu	36	12	65057326	65057326	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PPFIA2	8499	hgsc.bcm.edu	36	12	80257111	80257111	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ACAD10	80724	hgsc.bcm.edu	36	12	110631811	110631811	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SBNO1	55206	hgsc.bcm.edu	36	12	122376074	122376074	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SETD8	387893	hgsc.bcm.edu	36	12	122441264	122441264	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RYR3	6263	hgsc.bcm.edu	36	15	31786490	31786490	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CHRM5	1133	hgsc.bcm.edu	36	15	32142636	32142636	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
BUB1B	701	hgsc.bcm.edu	36	15	38285704	38285704	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PPIP5K1	9677	hgsc.bcm.edu	36	15	41614625	41614625	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PIGB	9488	hgsc.bcm.edu	36	15	53407037	53407037	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PYGO1	26108	hgsc.bcm.edu	36	15	53628457	53628457	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PTPLAD1	51495	hgsc.bcm.edu	36	15	63636199	63636199	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
THSD4	79875	hgsc.bcm.edu	36	15	69808117	69808117	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MXRA5	25878	hgsc.bcm.edu	36	X	3248128	3248128	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NLGN4X	57502	hgsc.bcm.edu	36	X	6079120	6079120	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KAL1	3730	hgsc.bcm.edu	36	X	8464873	8464873	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KAL1	3730	hgsc.bcm.edu	36	X	8513365	8513365	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FRMPD4	9758	hgsc.bcm.edu	36	X	12630008	12630008	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RAI2	10742	hgsc.bcm.edu	36	X	17729147	17729147	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RBM10	8241	hgsc.bcm.edu	36	X	46925591	46925591	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CCNB3	85417	hgsc.bcm.edu	36	X	50068270	50068270	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CCNB3	85417	hgsc.bcm.edu	36	X	50068991	50068991	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KDM5C	8242	hgsc.bcm.edu	36	X	53242797	53242797	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ATRX	546	hgsc.bcm.edu	36	X	76824505	76824505	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
BRWD3	254065	hgsc.bcm.edu	36	X	79872083	79872083	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RBMXL3	139804	hgsc.bcm.edu	36	X	114332776	114332776	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DCAF12L2	0	hgsc.bcm.edu	36	X	125126417	125126417	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DCAF12L1	0	hgsc.bcm.edu	36	X	125513432	125513432	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZDHHC9	51114	hgsc.bcm.edu	36	X	128774435	128774435	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZIC3	7547	hgsc.bcm.edu	36	X	136479743	136479743	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MAMLD1	10046	hgsc.bcm.edu	36	X	149390230	149390230	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PLXNB3	5365	hgsc.bcm.edu	36	X	152685562	152685562	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
L1CAM	3897	hgsc.bcm.edu	36	X	152783976	152783976	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TKTL1	8277	hgsc.bcm.edu	36	X	153209132	153209132	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
F8	2157	hgsc.bcm.edu	36	X	153810114	153810114	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KIAA0232	9778	hgsc.bcm.edu	36	4	6913767	6913767	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
YIPF7	285525	hgsc.bcm.edu	36	4	44321504	44321504	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PDGFRA	5156	hgsc.bcm.edu	36	4	54835494	54835494	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KIT	3815	hgsc.bcm.edu	36	4	55286949	55286949	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KIT	3815	hgsc.bcm.edu	36	4	55290356	55290356	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CSN1S1	1446	hgsc.bcm.edu	36	4	70837429	70837429	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DMP1	9988	hgsc.bcm.edu	36	4	88802994	88802994	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MEPE	56955	hgsc.bcm.edu	36	4	88986111	88986111	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CCDC109B	55013	hgsc.bcm.edu	36	4	110828145	110828145	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ANK2	287	hgsc.bcm.edu	36	4	114390412	114390412	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ABCE1	6059	hgsc.bcm.edu	36	4	146250980	146250980	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
OTUD4	54726	hgsc.bcm.edu	36	4	146278260	146278260	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DCLK2	166614	hgsc.bcm.edu	36	4	151388206	151388206	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FGB	2244	hgsc.bcm.edu	36	4	155711033	155711033	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NRBP1	29959	hgsc.bcm.edu	36	2	27510051	27510051	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PLB1	151056	hgsc.bcm.edu	36	2	28719342	28719342	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PPP1CB	5500	hgsc.bcm.edu	36	2	28870238	28870238	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ALK	238	hgsc.bcm.edu	36	2	29351854	29351854	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DHX57	90957	hgsc.bcm.edu	36	2	38942463	38942463	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
VWA3B	200403	hgsc.bcm.edu	36	2	98283029	98283029	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SCN7A	6332	hgsc.bcm.edu	36	2	167012458	167012458	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
OSBPL6	114880	hgsc.bcm.edu	36	2	178906011	178906011	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TTN	7273	hgsc.bcm.edu	36	2	179148835	179148835	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TTN	7273	hgsc.bcm.edu	36	2	179348922	179348922	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TTN	7273	hgsc.bcm.edu	36	2	179358663	179358663	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ITGA4	3676	hgsc.bcm.edu	36	2	182058900	182058900	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GULP1	51454	hgsc.bcm.edu	36	2	189157286	189157286	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ATIC	471	hgsc.bcm.edu	36	2	215911800	215911800	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SLC19A3	80704	hgsc.bcm.edu	36	2	228271949	228271949	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SPATA3	130560	hgsc.bcm.edu	36	2	231569315	231569315	+	Silent	SNP	T	T	C	rs61738380	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CHRND	1144	hgsc.bcm.edu	36	2	233107027	233107027	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KIF1A	547	hgsc.bcm.edu	36	2	241338543	241338543	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
JAK2	3717	hgsc.bcm.edu	36	9	5060024	5060024	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TAF1L	138474	hgsc.bcm.edu	36	9	32622683	32622683	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PRUNE2	158471	hgsc.bcm.edu	36	9	78513255	78513255	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
VPS13A	23230	hgsc.bcm.edu	36	9	79014256	79014256	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZNF462	58499	hgsc.bcm.edu	36	9	108731071	108731071	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MUSK	4593	hgsc.bcm.edu	36	9	112602934	112602934	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TRAF1	7185	hgsc.bcm.edu	36	9	122725807	122725807	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
GSN	2934	hgsc.bcm.edu	36	9	123134621	123134621	+	Silent	SNP	T	T	C	rs9102	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MRRF	92399	hgsc.bcm.edu	36	9	124073039	124073039	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
C9orf96	169436	hgsc.bcm.edu	36	9	135256777	135256777	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KIAA0649	9858	hgsc.bcm.edu	36	9	137517674	137517674	+	Silent	SNP	A	A	G	rs2004074	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SEC16A	9919	hgsc.bcm.edu	36	9	138489848	138489848	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CACNA1B	774	hgsc.bcm.edu	36	9	140110870	140110870	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MPHOSPH8	54737	hgsc.bcm.edu	36	13	19119201	19119201	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ATP12A	479	hgsc.bcm.edu	36	13	24163130	24163130	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
BRCA2	675	hgsc.bcm.edu	36	13	31827234	31827234	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
STARD13	90627	hgsc.bcm.edu	36	13	32614466	32614466	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
EPSTI1	94240	hgsc.bcm.edu	36	13	42360620	42360620	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PCDH9	5101	hgsc.bcm.edu	36	13	65777067	65777067	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PCDH9	5101	hgsc.bcm.edu	36	13	66699689	66699689	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
UGGT2	0	hgsc.bcm.edu	36	13	95473928	95473928	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PCCA	5095	hgsc.bcm.edu	36	13	99686121	99686121	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PITRM1	10531	hgsc.bcm.edu	36	10	3198566	3198566	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PITRM1	10531	hgsc.bcm.edu	36	10	3198567	3198567	+	Missense_Mutation	SNP	T	T	G	rs28416720	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
HSPA14	51182	hgsc.bcm.edu	36	10	14937857	14937857	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
WAC	51322	hgsc.bcm.edu	36	10	28919699	28919699	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ARHGAP12	94134	hgsc.bcm.edu	36	10	32183105	32183105	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SYT15	83849	hgsc.bcm.edu	36	10	46388671	46388671	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
WDFY4	57705	hgsc.bcm.edu	36	10	49848262	49848262	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TET1	80312	hgsc.bcm.edu	36	10	70120893	70120893	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DLG5	9231	hgsc.bcm.edu	36	10	79265602	79265602	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PTEN	5728	hgsc.bcm.edu	36	10	89682819	89682819	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PTEN	5728	hgsc.bcm.edu	36	10	89682883	89682883	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SLIT1	6586	hgsc.bcm.edu	36	10	98813337	98813337	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
COX15	1355	hgsc.bcm.edu	36	10	101477239	101477239	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
COL17A1	1308	hgsc.bcm.edu	36	10	105809880	105809880	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FAM45A	404636	hgsc.bcm.edu	36	10	120882027	120882027	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SEC23IP	11196	hgsc.bcm.edu	36	10	121675634	121675634	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SDHA	6389	hgsc.bcm.edu	36	5	304146	304146	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DNAH5	1767	hgsc.bcm.edu	36	5	13767611	13767611	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NIPBL	25836	hgsc.bcm.edu	36	5	36991337	36991337	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KIF2A	3796	hgsc.bcm.edu	36	5	61704085	61704085	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
APC	324	hgsc.bcm.edu	36	5	112190795	112190795	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
APC	324	hgsc.bcm.edu	36	5	112198677	112198677	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
APC	324	hgsc.bcm.edu	36	5	112202311	112202311	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
APC	324	hgsc.bcm.edu	36	5	112203119	112203119	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
APC	324	hgsc.bcm.edu	36	5	112203348	112203348	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PCDHA2	56146	hgsc.bcm.edu	36	5	140156086	140156086	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
LARS	51520	hgsc.bcm.edu	36	5	145488833	145488833	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
HTR4	3360	hgsc.bcm.edu	36	5	147825669	147825669	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
FAT2	2196	hgsc.bcm.edu	36	5	150903862	150903862	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
C5orf54	63920	hgsc.bcm.edu	36	5	159754018	159754018	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ODZ2	57451	hgsc.bcm.edu	36	5	167585802	167585802	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DOCK2	1794	hgsc.bcm.edu	36	5	169416308	169416308	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
OR2V2	285659	hgsc.bcm.edu	36	5	180514950	180514950	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TRIM52	84851	hgsc.bcm.edu	36	5	180620037	180620037	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CDH1	51343	hgsc.bcm.edu	36	16	67407164	67407164	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MLH1	4292	hgsc.bcm.edu	36	3	37028595	37028595	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MAN2A2	4122	hgsc.bcm.edu	36	15	89262426	89262426	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
HSD17B11	51170	hgsc.bcm.edu	36	4	88497454	88497454	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CRIM1	51232	hgsc.bcm.edu	36	2	36523260	36523260	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
RIF1	55791	hgsc.bcm.edu	36	2	152022519	152022519	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
SLC35E2	9906	hgsc.bcm.edu	36	1	1660602	1660604	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	GAA	GAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
LCE1F	353137	hgsc.bcm.edu	36	1	151015661	151015666	+	In_Frame_Del	DEL	GGTGGT	GGTGGT	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	GGTGGT	GGTGGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
OR14I1	401994	hgsc.bcm.edu	36	1	246911504	246911505	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PCYOX1	51449	hgsc.bcm.edu	36	2	70338850	70338851	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
REV1	51455	hgsc.bcm.edu	36	2	99385933	99385933	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TMEM37	140738	hgsc.bcm.edu	36	2	119911121	119911122	+	In_Frame_Ins	INS	-	-	GTGTGC	rs3217464	byCluster	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944292	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MYL1	4632	hgsc.bcm.edu	36	2	210888011	210888011	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZNF717	100131827	hgsc.bcm.edu	36	3	75869005	75869013	+	In_Frame_Del	DEL	CTACATTCT	CTACATTCT	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	CTACATTCT	CTACATTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PAK2	5586	hgsc.bcm.edu	36	3	197993958	197993959	+	Frame_Shift_Ins	INS	-	-	TGTGCGAA	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
HLA-B	3106	hgsc.bcm.edu	36	6	31432580	31432581	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
HLA-B	3106	hgsc.bcm.edu	36	6	31432583	31432583	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MUC6	4588	hgsc.bcm.edu	36	11	1008089	1008089	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
OR6C76	390326	hgsc.bcm.edu	36	12	54107226	54107226	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
PTPRQ	374462	hgsc.bcm.edu	36	12	79467637	79467654	+	In_Frame_Del	DEL	TGAAACAGGTAACTAACG	TGAAACAGGTAACTAACG	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	TGAAACAGGTAACTAACG	TGAAACAGGTAACTAACG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
KDM2B	84678	hgsc.bcm.edu	36	12	120503112	120503115	+	Frame_Shift_Del	DEL	TAAC	TAAC	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	TAAC	TAAC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ORAI1	84876	hgsc.bcm.edu	36	12	120549157	120549162	+	In_Frame_Del	DEL	CCGCCA	CCGCCA	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	CCGCCA	CCGCCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
MSLNL	401827	hgsc.bcm.edu	36	16	770749	770768	+	Frame_Shift_Del	DEL	GTGTGCACGGGTAGGTGACG	GTGTGCACGGGTAGGTGACG	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	GTGTGCACGGGTAGGTGACG	GTGTGCACGGGTAGGTGACG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
WDR81	124997	hgsc.bcm.edu	36	17	1578091	1578093	+	In_Frame_Del	DEL	GAG	GAG	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	GAG	GAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
HOXB1	3211	hgsc.bcm.edu	36	17	43963183	43963184	+	In_Frame_Ins	INS	-	-	GGGCGCTGT	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
TGIF1	7050	hgsc.bcm.edu	36	18	3442223	3442223	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
CREB3L3	84699	hgsc.bcm.edu	36	19	4108198	4108199	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
ZNF418	147686	hgsc.bcm.edu	36	19	63130167	63130168	+	Frame_Shift_Del	DEL	AT	AT	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	AT	AT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
DEFB126	81623	hgsc.bcm.edu	36	20	74311	74312	+	Frame_Shift_Del	DEL	CC	CC	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	CC	CC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NINL	22981	hgsc.bcm.edu	36	20	25405050	25405055	+	In_Frame_Del	DEL	CTCCCA	CTCCCA	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	CTCCCA	CTCCCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
NEFH	4744	hgsc.bcm.edu	36	22	28215599	28215604	+	In_Frame_Del	DEL	AGGAAG	AGGAAG	-	novel	unknown	TCGA-CM-5868-01A-01D-1650-10	TCGA-CM-5868-10A-01D-1650-10	AGGAAG	AGGAAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3db1cd5d-6978-44e0-b3b9-951c4ac33493	15f1206f-0456-4cb9-9345-194618f0cc4f
