Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
INTS1	26173	hgsc.bcm.edu	36	7	1487039	1487039	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
INTS1	26173	hgsc.bcm.edu	36	7	1487040	1487040	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TAX1BP1	8887	hgsc.bcm.edu	36	7	27799317	27799317	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
WIPF3	644150	hgsc.bcm.edu	36	7	29890666	29890666	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
C7orf16	10842	hgsc.bcm.edu	36	7	31701675	31701675	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ANLN	54443	hgsc.bcm.edu	36	7	36433084	36433084	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
VPS41	27072	hgsc.bcm.edu	36	7	38758398	38758398	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
HECW1	23072	hgsc.bcm.edu	36	7	43413715	43413715	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ABCA13	154664	hgsc.bcm.edu	36	7	48289395	48289395	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
WBSCR17	64409	hgsc.bcm.edu	36	7	70772923	70772923	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SEMA3E	9723	hgsc.bcm.edu	36	7	82875639	82875639	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CROT	54677	hgsc.bcm.edu	36	7	86849388	86849388	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
AKAP9	10142	hgsc.bcm.edu	36	7	91479846	91479846	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
AKAP9	10142	hgsc.bcm.edu	36	7	91549888	91549888	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DYNC1I1	1780	hgsc.bcm.edu	36	7	95495436	95495436	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ATP5J2	9551	hgsc.bcm.edu	36	7	98895698	98895698	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TAF6	6878	hgsc.bcm.edu	36	7	99547785	99547785	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PILRA	29992	hgsc.bcm.edu	36	7	99809273	99809273	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MUC17	140453	hgsc.bcm.edu	36	7	100480511	100480511	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PNPLA8	50640	hgsc.bcm.edu	36	7	107942453	107942453	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
IFRD1	3475	hgsc.bcm.edu	36	7	111883340	111883340	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
C7orf60	154743	hgsc.bcm.edu	36	7	112249204	112249204	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GPR85	54329	hgsc.bcm.edu	36	7	112511531	112511531	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MKRN1	23608	hgsc.bcm.edu	36	7	139801397	139801397	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CNTNAP2	26047	hgsc.bcm.edu	36	7	146723794	146723794	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PCSK2	5126	hgsc.bcm.edu	36	20	17382519	17382519	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SLC24A3	57419	hgsc.bcm.edu	36	20	19612964	19612964	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
C20orf70	140683	hgsc.bcm.edu	36	20	31229648	31229648	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DIDO1	11083	hgsc.bcm.edu	36	20	60981687	60981687	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZNF280B	140883	hgsc.bcm.edu	36	22	21173714	21173714	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PITPNB	23760	hgsc.bcm.edu	36	22	26622561	26622561	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NF2	4771	hgsc.bcm.edu	36	22	28365097	28365097	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NF2	4771	hgsc.bcm.edu	36	22	28384212	28384212	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RASD2	23551	hgsc.bcm.edu	36	22	34277617	34277617	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ADSL	158	hgsc.bcm.edu	36	22	39075946	39075946	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ACO2	50	hgsc.bcm.edu	36	22	40250820	40250820	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
OR4K1	79544	hgsc.bcm.edu	36	14	19474561	19474561	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CHD8	57680	hgsc.bcm.edu	36	14	20940064	20940064	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TRMT5	57570	hgsc.bcm.edu	36	14	60512084	60512084	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RHOJ	57381	hgsc.bcm.edu	36	14	62805600	62805600	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TSHR	7253	hgsc.bcm.edu	36	14	80680024	80680024	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SAFB	6294	hgsc.bcm.edu	36	19	5604365	5604365	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MYO1F	4542	hgsc.bcm.edu	36	19	8526640	8526640	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SMARCA4	6597	hgsc.bcm.edu	36	19	10990634	10990634	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DOCK6	57572	hgsc.bcm.edu	36	19	11173772	11173772	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CYP4F12	66002	hgsc.bcm.edu	36	19	15655521	15655521	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ELL	8178	hgsc.bcm.edu	36	19	18423408	18423408	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FCGBP	8857	hgsc.bcm.edu	36	19	45060256	45060256	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PSG9	5678	hgsc.bcm.edu	36	19	48458090	48458090	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CD177	57126	hgsc.bcm.edu	36	19	48550379	48550379	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
HRC	3270	hgsc.bcm.edu	36	19	54349104	54349104	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SLC6A16	28968	hgsc.bcm.edu	36	19	54506046	54506046	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZNF480	147657	hgsc.bcm.edu	36	19	57517393	57517393	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZNF610	162963	hgsc.bcm.edu	36	19	57561367	57561367	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DLC1	10395	hgsc.bcm.edu	36	8	13401243	13401243	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
XPO7	23039	hgsc.bcm.edu	36	8	21896146	21896146	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TNFRSF10A	8797	hgsc.bcm.edu	36	8	23105231	23105231	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DOCK5	80005	hgsc.bcm.edu	36	8	25255872	25255872	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DDHD2	23259	hgsc.bcm.edu	36	8	38228945	38228945	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FGFR1	2260	hgsc.bcm.edu	36	8	38398608	38398608	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PRKDC	5591	hgsc.bcm.edu	36	8	49004229	49004229	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PRKDC	5591	hgsc.bcm.edu	36	8	49011486	49011486	+	Missense_Mutation	SNP	C	C	T	rs55925466	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CHD7	55636	hgsc.bcm.edu	36	8	61913207	61913207	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CHD7	55636	hgsc.bcm.edu	36	8	61927739	61927739	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CYP7B1	9420	hgsc.bcm.edu	36	8	65671998	65671998	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TERF1	7013	hgsc.bcm.edu	36	8	74101757	74101757	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MRPL13	28998	hgsc.bcm.edu	36	8	121524698	121524698	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
HAS2	3037	hgsc.bcm.edu	36	8	122695716	122695716	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DNAJC11	55735	hgsc.bcm.edu	36	1	6619975	6619975	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KIF1B	23095	hgsc.bcm.edu	36	1	10279673	10279673	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CASP9	842	hgsc.bcm.edu	36	1	15717208	15717208	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SRRM1	10250	hgsc.bcm.edu	36	1	24850623	24850623	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
STX12	23673	hgsc.bcm.edu	36	1	27992705	27992705	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
C1orf94	84970	hgsc.bcm.edu	36	1	34456889	34456889	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
EIF2C4	192670	hgsc.bcm.edu	36	1	36064238	36064238	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MFSD2A	0	hgsc.bcm.edu	36	1	40195402	40195402	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
LRRIQ3	127255	hgsc.bcm.edu	36	1	74420871	74420871	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
IFI44L	10964	hgsc.bcm.edu	36	1	78866532	78866532	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
WDR47	22911	hgsc.bcm.edu	36	1	109339757	109339757	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SV2A	9900	hgsc.bcm.edu	36	1	148147979	148147979	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TDRD10	126668	hgsc.bcm.edu	36	1	152783561	152783561	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FCRL1	115350	hgsc.bcm.edu	36	1	156038902	156038902	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PIGC	5279	hgsc.bcm.edu	36	1	170678312	170678312	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RASAL2	9462	hgsc.bcm.edu	36	1	176687331	176687331	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CDC73	79577	hgsc.bcm.edu	36	1	191360877	191360877	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ASPM	259266	hgsc.bcm.edu	36	1	195340175	195340175	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KDM5B	10765	hgsc.bcm.edu	36	1	200981710	200981710	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ATP2B4	493	hgsc.bcm.edu	36	1	201939469	201939469	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
USH2A	7399	hgsc.bcm.edu	36	1	214026763	214026763	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
USH2A	7399	hgsc.bcm.edu	36	1	214030129	214030129	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ACTA1	58	hgsc.bcm.edu	36	1	227635438	227635438	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
LYST	1130	hgsc.bcm.edu	36	1	234038959	234038959	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RYR2	6262	hgsc.bcm.edu	36	1	235560832	235560832	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FMN2	56776	hgsc.bcm.edu	36	1	238418143	238418143	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
HRAS	3265	hgsc.bcm.edu	36	11	523878	523878	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MUC6	4588	hgsc.bcm.edu	36	11	1010245	1010245	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KRTAP5-4	387267	hgsc.bcm.edu	36	11	1599822	1599822	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
OLFML1	283298	hgsc.bcm.edu	36	11	7487543	7487543	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
WT1	7490	hgsc.bcm.edu	36	11	32370168	32370168	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
WT1	7490	hgsc.bcm.edu	36	11	32370805	32370805	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
WT1	7490	hgsc.bcm.edu	36	11	32370826	32370826	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RAG1	5896	hgsc.bcm.edu	36	11	36553292	36553292	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
OR4A16	81327	hgsc.bcm.edu	36	11	54867443	54867443	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
OR8U1	219417	hgsc.bcm.edu	36	11	55899807	55899807	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
OR4D10	390197	hgsc.bcm.edu	36	11	59001782	59001782	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SLC22A10	387775	hgsc.bcm.edu	36	11	62814454	62814454	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
C11orf30	56946	hgsc.bcm.edu	36	11	75852729	75852729	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
USP35	57558	hgsc.bcm.edu	36	11	77594677	77594677	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MRE11A	4361	hgsc.bcm.edu	36	11	93844523	93844523	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SESN3	143686	hgsc.bcm.edu	36	11	94564234	94564234	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MMP8	4317	hgsc.bcm.edu	36	11	102092269	102092269	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CADM1	23705	hgsc.bcm.edu	36	11	114593904	114593904	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
BCL9L	283149	hgsc.bcm.edu	36	11	118283500	118283500	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DPAGT1	1798	hgsc.bcm.edu	36	11	118477549	118477549	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
OR8D1	283159	hgsc.bcm.edu	36	11	123685529	123685529	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
OPCML	4978	hgsc.bcm.edu	36	11	131812380	131812380	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
HLA-C	3107	hgsc.bcm.edu	36	6	31347095	31347095	+	Missense_Mutation	SNP	G	G	A	rs1131119	byCluster	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ITPR3	3710	hgsc.bcm.edu	36	6	33755844	33755844	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DNAH8	1769	hgsc.bcm.edu	36	6	38949053	38949053	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
C6orf142	90523	hgsc.bcm.edu	36	6	54097478	54097478	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
AIM1	51151	hgsc.bcm.edu	36	6	107074899	107074899	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SYNE1	23345	hgsc.bcm.edu	36	6	152632074	152632074	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TIAM2	26230	hgsc.bcm.edu	36	6	155619927	155619927	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TP53	7157	hgsc.bcm.edu	36	17	7518297	7518297	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TP53	7157	hgsc.bcm.edu	36	17	7520151	7520151	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RNF112	7732	hgsc.bcm.edu	36	17	19258716	19258716	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ALDH3A2	224	hgsc.bcm.edu	36	17	19508857	19508857	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NUFIP2	57532	hgsc.bcm.edu	36	17	24637203	24637203	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
BLMH	642	hgsc.bcm.edu	36	17	25636585	25636585	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NF1	4763	hgsc.bcm.edu	36	17	26521095	26521095	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NF1	4763	hgsc.bcm.edu	36	17	26586769	26586769	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PSMD11	5717	hgsc.bcm.edu	36	17	27815668	27815668	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CCL7	6354	hgsc.bcm.edu	36	17	29622313	29622313	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
STAC2	342667	hgsc.bcm.edu	36	17	34624981	34624981	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CACNA1G	8913	hgsc.bcm.edu	36	17	46033098	46033098	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RPS6KB1	6198	hgsc.bcm.edu	36	17	55366664	55366664	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CACNG5	140738	hgsc.bcm.edu	36	17	62311299	62311299	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GGA3	23163	hgsc.bcm.edu	36	17	70745963	70745963	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
B3GNTL1	146712	hgsc.bcm.edu	36	17	78508606	78508606	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
C21orf91	54149	hgsc.bcm.edu	36	21	18091040	18091040	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GABPA	2551	hgsc.bcm.edu	36	21	26043285	26043285	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TIAM1	7074	hgsc.bcm.edu	36	21	31489446	31489446	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SYNJ1	8867	hgsc.bcm.edu	36	21	32979983	32979983	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
IFNAR2	3455	hgsc.bcm.edu	36	21	33554842	33554842	+	Silent	SNP	C	C	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZNF295	49854	hgsc.bcm.edu	36	21	42285036	42285036	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
AXIN1	8312	hgsc.bcm.edu	36	16	294324	294324	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
C16orf73	254528	hgsc.bcm.edu	36	16	1834930	1834930	+	Nonsense_Mutation	SNP	G	G	A	rs35694423	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CREBBP	1387	hgsc.bcm.edu	36	16	3757813	3757813	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PALB2	79728	hgsc.bcm.edu	36	16	23522339	23522339	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CNOT1	23019	hgsc.bcm.edu	36	16	57133878	57133878	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CDH1	51343	hgsc.bcm.edu	36	16	67393130	67393130	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CDH1	51343	hgsc.bcm.edu	36	16	67410829	67410829	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TAT	6898	hgsc.bcm.edu	36	16	70167812	70167812	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PKD1L2	114780	hgsc.bcm.edu	36	16	79730744	79730744	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GAN	8139	hgsc.bcm.edu	36	16	79968411	79968411	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CDH13	1012	hgsc.bcm.edu	36	16	81808592	81808592	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZNF469	84627	hgsc.bcm.edu	36	16	87028076	87028076	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZNF521	25925	hgsc.bcm.edu	36	18	21061080	21061080	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DSC2	1825	hgsc.bcm.edu	36	18	26920671	26920671	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KIAA1632	57724	hgsc.bcm.edu	36	18	41701600	41701600	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
HAUS1	115106	hgsc.bcm.edu	36	18	41962078	41962078	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZBTB7C	201501	hgsc.bcm.edu	36	18	43821395	43821395	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SMAD4	4089	hgsc.bcm.edu	36	18	46845901	46845901	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SMAD4	4089	hgsc.bcm.edu	36	18	46858688	46858688	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
IL5RA	3568	hgsc.bcm.edu	36	3	3112079	3112079	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
VHL	7428	hgsc.bcm.edu	36	3	10166606	10166606	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TOP2B	7155	hgsc.bcm.edu	36	3	25650413	25650413	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TGFBR2	7048	hgsc.bcm.edu	36	3	30704972	30704972	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DCLK3	85443	hgsc.bcm.edu	36	3	36734598	36734598	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ITGA9	3680	hgsc.bcm.edu	36	3	37835450	37835450	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MYRIP	25924	hgsc.bcm.edu	36	3	40060604	40060604	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CTNNB1	1499	hgsc.bcm.edu	36	3	41241115	41241115	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
LTF	4057	hgsc.bcm.edu	36	3	46465418	46465418	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CELSR3	1951	hgsc.bcm.edu	36	3	48671847	48671847	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
BAP1	9223	hgsc.bcm.edu	36	3	52417598	52417598	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CBLB	868	hgsc.bcm.edu	36	3	106883278	106883278	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SLC9A10	285335	hgsc.bcm.edu	36	3	113480328	113480328	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MBD4	8930	hgsc.bcm.edu	36	3	130634773	130634773	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
EPHB1	2047	hgsc.bcm.edu	36	3	136403156	136403156	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MRAS	22808	hgsc.bcm.edu	36	3	139600066	139600066	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PIK3CA	5290	hgsc.bcm.edu	36	3	180399631	180399631	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PIK3CA	5290	hgsc.bcm.edu	36	3	180404246	180404246	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ABCF3	55324	hgsc.bcm.edu	36	3	185390400	185390400	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FAM43A	131583	hgsc.bcm.edu	36	3	195889812	195889812	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MUC4	4585	hgsc.bcm.edu	36	3	196996702	196996702	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PIK3C2G	5288	hgsc.bcm.edu	36	12	18549503	18549503	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ST8SIA1	6489	hgsc.bcm.edu	36	12	22378369	22378369	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KRAS	3845	hgsc.bcm.edu	36	12	25289552	25289552	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KRAS	3845	hgsc.bcm.edu	36	12	25289556	25289556	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TFCP2	7024	hgsc.bcm.edu	36	12	49798742	49798742	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NCKAP1L	3071	hgsc.bcm.edu	36	12	53216271	53216271	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
LUM	4060	hgsc.bcm.edu	36	12	90026505	90026505	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
UHRF1BP1L	23074	hgsc.bcm.edu	36	12	99001020	99001020	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RBM19	9904	hgsc.bcm.edu	36	12	112859281	112859281	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KNTC1	9735	hgsc.bcm.edu	36	12	121623710	121623710	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RIMBP2	23504	hgsc.bcm.edu	36	12	129488986	129488986	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GOLGA3	2802	hgsc.bcm.edu	36	12	131875697	131875697	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
C15orf2	23742	hgsc.bcm.edu	36	15	22472604	22472604	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SLC24A1	9187	hgsc.bcm.edu	36	15	63705206	63705206	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZNF592	9640	hgsc.bcm.edu	36	15	83143399	83143399	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NTRK3	4916	hgsc.bcm.edu	36	15	86224518	86224518	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FURIN	5045	hgsc.bcm.edu	36	15	89220730	89220730	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
S100G	795	hgsc.bcm.edu	36	X	16579087	16579087	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
POLA1	5422	hgsc.bcm.edu	36	X	24631322	24631322	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
EFHC2	80258	hgsc.bcm.edu	36	X	44005473	44005473	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FAM120C	54954	hgsc.bcm.edu	36	X	54202714	54202714	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MED12	9968	hgsc.bcm.edu	36	X	70262062	70262062	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZDHHC15	158866	hgsc.bcm.edu	36	X	74659466	74659466	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
BRWD3	254065	hgsc.bcm.edu	36	X	79823651	79823651	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DACH2	117154	hgsc.bcm.edu	36	X	85836795	85836795	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ODZ1	10178	hgsc.bcm.edu	36	X	123603388	123603388	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ACTRT1	139741	hgsc.bcm.edu	36	X	127013706	127013706	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GPR112	139378	hgsc.bcm.edu	36	X	135271322	135271322	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
WHSC1	7468	hgsc.bcm.edu	36	4	1932564	1932564	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
OTOP1	133060	hgsc.bcm.edu	36	4	4250427	4250427	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GPR78	27201	hgsc.bcm.edu	36	4	8633697	8633697	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
BEND4	389206	hgsc.bcm.edu	36	4	41822434	41822434	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KIT	3815	hgsc.bcm.edu	36	4	55286959	55286959	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KDR	3791	hgsc.bcm.edu	36	4	55649869	55649869	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TMPRSS11F	389208	hgsc.bcm.edu	36	4	68607680	68607680	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
HTN3	3347	hgsc.bcm.edu	36	4	70931084	70931084	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CSN3	8533	hgsc.bcm.edu	36	4	71149371	71149371	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PRKG2	5593	hgsc.bcm.edu	36	4	82344902	82344902	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ADH7	131	hgsc.bcm.edu	36	4	100560946	100560946	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TRPC3	7222	hgsc.bcm.edu	36	4	123073078	123073078	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FBXW7	55294	hgsc.bcm.edu	36	4	153466617	153466617	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ADAM29	11086	hgsc.bcm.edu	36	4	176135487	176135487	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SNX25	83891	hgsc.bcm.edu	36	4	186504687	186504687	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NBAS	51594	hgsc.bcm.edu	36	2	15276398	15276398	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SULT6B1	391365	hgsc.bcm.edu	36	2	37252190	37252190	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
STON1-GTF2A1L	286749	hgsc.bcm.edu	36	2	48661648	48661648	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
BCL11A	53335	hgsc.bcm.edu	36	2	60541333	60541333	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
USP34	9736	hgsc.bcm.edu	36	2	61346783	61346783	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GMCL1	64395	hgsc.bcm.edu	36	2	69935489	69935489	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SEMA4F	10505	hgsc.bcm.edu	36	2	74738517	74738517	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZAP70	7535	hgsc.bcm.edu	36	2	97718186	97718186	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TGFBRAP1	9392	hgsc.bcm.edu	36	2	105281577	105281577	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
LRP1B	53353	hgsc.bcm.edu	36	2	140975766	140975766	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KCNH7	90134	hgsc.bcm.edu	36	2	162988192	162988192	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SCN9A	6335	hgsc.bcm.edu	36	2	166858000	166858000	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ITGA6	3655	hgsc.bcm.edu	36	2	173048645	173048645	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TTN	7273	hgsc.bcm.edu	36	2	179142567	179142567	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TTN	7273	hgsc.bcm.edu	36	2	179298575	179298575	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TTN	7273	hgsc.bcm.edu	36	2	179358663	179358663	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CCDC141	285025	hgsc.bcm.edu	36	2	179410667	179410667	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CERKL	375298	hgsc.bcm.edu	36	2	182131604	182131604	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
COL3A1	1281	hgsc.bcm.edu	36	2	189567268	189567268	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ERBB4	2066	hgsc.bcm.edu	36	2	212298055	212298055	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MARCH4	57574	hgsc.bcm.edu	36	2	216943136	216943136	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CCDC108	255101	hgsc.bcm.edu	36	2	219600669	219600669	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GLB1L	79411	hgsc.bcm.edu	36	2	219812590	219812590	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SPEG	10290	hgsc.bcm.edu	36	2	220046055	220046055	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
OBSL1	23363	hgsc.bcm.edu	36	2	220131348	220131348	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
UGT1A6	54578	hgsc.bcm.edu	36	2	234345675	234345675	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
STK25	10494	hgsc.bcm.edu	36	2	242084596	242084596	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
JAK2	3717	hgsc.bcm.edu	36	9	5116714	5116714	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ADAMTSL1	92949	hgsc.bcm.edu	36	9	18767136	18767136	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
IFNB1	3456	hgsc.bcm.edu	36	9	21067537	21067537	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
IFNA2	3440	hgsc.bcm.edu	36	9	21374799	21374799	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZNF658	26149	hgsc.bcm.edu	36	9	40763967	40763967	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TLE1	7088	hgsc.bcm.edu	36	9	83395689	83395689	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PPP3R2	5535	hgsc.bcm.edu	36	9	103396767	103396767	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
COL27A1	85301	hgsc.bcm.edu	36	9	116109855	116109855	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SPTAN1	6709	hgsc.bcm.edu	36	9	130400555	130400555	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ABL1	25	hgsc.bcm.edu	36	9	132728152	132728152	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
EXD3	54932	hgsc.bcm.edu	36	9	139365672	139365672	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ATP12A	479	hgsc.bcm.edu	36	13	24162509	24162509	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NBEA	26960	hgsc.bcm.edu	36	13	34704744	34704744	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
HTR2A	3356	hgsc.bcm.edu	36	13	46364631	46364631	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RB1	5925	hgsc.bcm.edu	36	13	47931956	47931956	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RB1	5925	hgsc.bcm.edu	36	13	47937190	47937190	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RCBTB2	1102	hgsc.bcm.edu	36	13	47987364	47987364	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SETDB2	83852	hgsc.bcm.edu	36	13	48953234	48953234	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KLF5	688	hgsc.bcm.edu	36	13	72534762	72534762	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
UGGT2	0	hgsc.bcm.edu	36	13	95334926	95334926	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RNF113B	140432	hgsc.bcm.edu	36	13	97626797	97626797	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NALCN	259232	hgsc.bcm.edu	36	13	100828997	100828997	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PTF1A	256297	hgsc.bcm.edu	36	10	23522818	23522818	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MYO3A	53904	hgsc.bcm.edu	36	10	26503239	26503239	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
KIF5B	3799	hgsc.bcm.edu	36	10	32369382	32369382	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ANK3	288	hgsc.bcm.edu	36	10	61504063	61504063	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CDH23	64072	hgsc.bcm.edu	36	10	73207996	73207996	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GRID1	2894	hgsc.bcm.edu	36	10	87618847	87618847	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PTEN	5728	hgsc.bcm.edu	36	10	89643796	89643796	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PLCE1	51196	hgsc.bcm.edu	36	10	95781562	95781562	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CHUK	1147	hgsc.bcm.edu	36	10	101968552	101968552	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
COL17A1	1308	hgsc.bcm.edu	36	10	105809880	105809880	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FAM160B1	57700	hgsc.bcm.edu	36	10	116585307	116585307	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ATRNL1	26033	hgsc.bcm.edu	36	10	117016300	117016300	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
STK32C	282974	hgsc.bcm.edu	36	10	133871509	133871509	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PDZD2	23037	hgsc.bcm.edu	36	5	32126540	32126540	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PIK3R1	5295	hgsc.bcm.edu	36	5	67626842	67626842	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PIK3R1	5295	hgsc.bcm.edu	36	5	67627886	67627886	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SV2C	22987	hgsc.bcm.edu	36	5	75463854	75463854	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
F2R	2149	hgsc.bcm.edu	36	5	76064570	76064570	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
DMGDH	29958	hgsc.bcm.edu	36	5	78395228	78395228	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ANKRD32	84250	hgsc.bcm.edu	36	5	94048167	94048167	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
APC	324	hgsc.bcm.edu	36	5	112201502	112201502	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
APC	324	hgsc.bcm.edu	36	5	112201993	112201993	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
APC	324	hgsc.bcm.edu	36	5	112203167	112203167	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
APC	324	hgsc.bcm.edu	36	5	112203257	112203257	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
APC	324	hgsc.bcm.edu	36	5	112203449	112203449	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
APC	324	hgsc.bcm.edu	36	5	112203673	112203673	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
APC	324	hgsc.bcm.edu	36	5	112203841	112203841	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FEM1C	56929	hgsc.bcm.edu	36	5	114888373	114888373	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FAM53C	51307	hgsc.bcm.edu	36	5	137710459	137710459	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PCDHB3	56132	hgsc.bcm.edu	36	5	140461793	140461793	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PCDHB7	56129	hgsc.bcm.edu	36	5	140534188	140534188	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NR3C1	2908	hgsc.bcm.edu	36	5	142658506	142658506	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FAT2	2196	hgsc.bcm.edu	36	5	150914116	150914116	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SGCD	6444	hgsc.bcm.edu	36	5	156007103	156007103	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
C5orf40	408263	hgsc.bcm.edu	36	5	156703114	156703114	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SLIT3	6586	hgsc.bcm.edu	36	5	168611032	168611032	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CDHR2	0	hgsc.bcm.edu	36	5	175928407	175928407	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ACTR10	55860	hgsc.bcm.edu	36	14	57739324	57739324	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
CDH11	1009	hgsc.bcm.edu	36	16	63584439	63584439	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RB1	5925	hgsc.bcm.edu	36	13	47853383	47853383	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FMN2	56776	hgsc.bcm.edu	36	1	238437537	238437569	+	In_Frame_Del	DEL	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944292	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FAM171B	165215	hgsc.bcm.edu	36	2	187267292	187267293	+	In_Frame_Ins	INS	-	-	CAA	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GIGYF2	26058	hgsc.bcm.edu	36	2	233417048	233417050	+	In_Frame_Del	DEL	CAA	CAA	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	CAA	CAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RNF145	153830	hgsc.bcm.edu	36	5	158563220	158563220	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RP1L1	94137	hgsc.bcm.edu	36	8	10504927	10504928	+	Frame_Shift_Del	DEL	CC	CC	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	CC	CC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RP1L1	94137	hgsc.bcm.edu	36	8	10504930	10504930	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RP1L1	94137	hgsc.bcm.edu	36	8	10504937	10504937	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
RP1L1	94137	hgsc.bcm.edu	36	8	10504939	10504940	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	TC	TC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TFAM	7019	hgsc.bcm.edu	36	10	59818576	59818576	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
MUC5B	727897	hgsc.bcm.edu	36	11	1226973	1226978	+	In_Frame_Del	DEL	CCACGG	CCACGG	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	CCACGG	CCACGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SAAL1	113174	hgsc.bcm.edu	36	11	18084134	18084135	+	In_Frame_Ins	INS	-	-	CGG	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
FAM186A	121006	hgsc.bcm.edu	36	12	49032180	49032215	+	In_Frame_Del	DEL	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
SCN8A	6334	hgsc.bcm.edu	36	12	50364330	50364331	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
GLI1	2735	hgsc.bcm.edu	36	12	56151705	56151705	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
JPH4	84502	hgsc.bcm.edu	36	14	23110275	23110276	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
PPL	5493	hgsc.bcm.edu	36	16	4883633	4883634	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
ZP2	7783	hgsc.bcm.edu	36	16	21116375	21116376	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
INO80E	283899	hgsc.bcm.edu	36	16	29915166	29915166	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
TXNDC2	84203	hgsc.bcm.edu	36	18	9877389	9877433	+	In_Frame_Del	DEL	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
POLI	11201	hgsc.bcm.edu	36	18	50049956	50049958	+	In_Frame_Del	DEL	CGA	CGA	-	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	CGA	CGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
NEFH	4744	hgsc.bcm.edu	36	22	28215581	28215582	+	In_Frame_Ins	INS	-	-	GGCCAAGTCCCCTGAGAA	novel	unknown	TCGA-CM-6161-01A-11D-1650-10	TCGA-CM-6161-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	9340b612-4d1b-4e4d-9388-17a8cfc396ff	975b8505-68be-48ca-b7b3-8f9679417c25
