Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
C7orf27	221927	hgsc.bcm.edu	36	7	2544603	2544603	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IQCE	23288	hgsc.bcm.edu	36	7	2596240	2596240	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AMZ1	155185	hgsc.bcm.edu	36	7	2715243	2715243	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CARD11	84433	hgsc.bcm.edu	36	7	2944930	2944930	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CARD11	84433	hgsc.bcm.edu	36	7	2946042	2946042	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SDK1	221935	hgsc.bcm.edu	36	7	4212040	4212040	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FSCN1	6624	hgsc.bcm.edu	36	7	5611611	5611611	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GRID2IP	392862	hgsc.bcm.edu	36	7	6514196	6514196	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PHF14	9678	hgsc.bcm.edu	36	7	11034942	11034942	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABCB5	340273	hgsc.bcm.edu	36	7	20749100	20749100	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNAH11	8701	hgsc.bcm.edu	36	7	21576426	21576426	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NOD1	10392	hgsc.bcm.edu	36	7	30458484	30458484	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CRHR2	1395	hgsc.bcm.edu	36	7	30661213	30661213	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM188B	84182	hgsc.bcm.edu	36	7	30777690	30777690	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYO1G	64005	hgsc.bcm.edu	36	7	44977086	44977086	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CCM2	83605	hgsc.bcm.edu	36	7	45080514	45080514	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NACAD	23148	hgsc.bcm.edu	36	7	45086881	45086881	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NACAD	23148	hgsc.bcm.edu	36	7	45091516	45091516	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABCA13	154664	hgsc.bcm.edu	36	7	48285988	48285988	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EGFR	1956	hgsc.bcm.edu	36	7	55189217	55189217	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EGFR	1956	hgsc.bcm.edu	36	7	55209998	55209998	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BAZ1B	9031	hgsc.bcm.edu	36	7	72529913	72529913	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
POM121C	100101267	hgsc.bcm.edu	36	7	74889125	74889125	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCLO	27445	hgsc.bcm.edu	36	7	82417505	82417505	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SGCE	8910	hgsc.bcm.edu	36	7	94123322	94123322	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PEG10	23089	hgsc.bcm.edu	36	7	94131187	94131187	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PON1	5444	hgsc.bcm.edu	36	7	94785637	94785637	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TECPR1	25851	hgsc.bcm.edu	36	7	97711868	97711868	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NPTX2	4885	hgsc.bcm.edu	36	7	98094509	98094509	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CYP3A7	1551	hgsc.bcm.edu	36	7	99151335	99151335	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STAG3	10734	hgsc.bcm.edu	36	7	99624546	99624546	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZCWPW1	55063	hgsc.bcm.edu	36	7	99836642	99836642	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EPHB4	2050	hgsc.bcm.edu	36	7	100241147	100241147	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYL10	93408	hgsc.bcm.edu	36	7	101052148	101052148	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SH2B2	10603	hgsc.bcm.edu	36	7	101730693	101730693	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALKBH4	54784	hgsc.bcm.edu	36	7	101887119	101887119	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRWD1	222229	hgsc.bcm.edu	36	7	101900197	101900197	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IFRD1	3475	hgsc.bcm.edu	36	7	111895372	111895372	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ST7	29967	hgsc.bcm.edu	36	7	116650252	116650252	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RBM28	55131	hgsc.bcm.edu	36	7	127748672	127748672	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FLNC	2318	hgsc.bcm.edu	36	7	128285438	128285438	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ATP6V1F	9296	hgsc.bcm.edu	36	7	128292808	128292808	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KCP	375616	hgsc.bcm.edu	36	7	128317558	128317558	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TNPO3	23534	hgsc.bcm.edu	36	7	128421165	128421165	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NUP205	23165	hgsc.bcm.edu	36	7	134973849	134973849	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SVOPL	136306	hgsc.bcm.edu	36	7	138014287	138014287	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR9A4	130075	hgsc.bcm.edu	36	7	141265922	141265922	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABP1	28988	hgsc.bcm.edu	36	7	150185518	150185518	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABCF2	10061	hgsc.bcm.edu	36	7	150543075	150543075	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SMARCD3	6604	hgsc.bcm.edu	36	7	150567479	150567479	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MLL3	58508	hgsc.bcm.edu	36	7	151476300	151476300	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTPRN2	5799	hgsc.bcm.edu	36	7	157619285	157619285	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR60	55112	hgsc.bcm.edu	36	7	158376726	158376726	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TGM6	343641	hgsc.bcm.edu	36	20	2328296	2328296	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTPRA	5786	hgsc.bcm.edu	36	20	2950008	2950008	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC4A11	83959	hgsc.bcm.edu	36	20	3162830	3162830	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
JAG1	182	hgsc.bcm.edu	36	20	10574698	10574698	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
JAG1	182	hgsc.bcm.edu	36	20	10581195	10581195	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BTBD3	22903	hgsc.bcm.edu	36	20	11851916	11851916	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C20orf26	26074	hgsc.bcm.edu	36	20	20191713	20191713	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GGTLC1	92086	hgsc.bcm.edu	36	20	23915201	23915201	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DEFB119	245932	hgsc.bcm.edu	36	20	29440631	29440631	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C20orf112	140688	hgsc.bcm.edu	36	20	30507790	30507790	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNMT3B	1789	hgsc.bcm.edu	36	20	30851706	30851706	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BPIL3	128859	hgsc.bcm.edu	36	20	31083188	31083188	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYH7B	57644	hgsc.bcm.edu	36	20	33039095	33039095	+	Missense_Mutation	SNP	C	C	T	rs45522831	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ERGIC3	51614	hgsc.bcm.edu	36	20	33608685	33608685	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C20orf117	140710	hgsc.bcm.edu	36	20	34864774	34864774	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C20orf117	140710	hgsc.bcm.edu	36	20	34877452	34877452	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TGM2	7052	hgsc.bcm.edu	36	20	36203926	36203926	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1755	85449	hgsc.bcm.edu	36	20	36303192	36303192	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GDAP1L1	78997	hgsc.bcm.edu	36	20	42341276	42341276	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FITM2	128486	hgsc.bcm.edu	36	20	42369215	42369215	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYS1	90196	hgsc.bcm.edu	36	20	43429070	43429070	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC12A5	57468	hgsc.bcm.edu	36	20	44105272	44105272	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NCOA3	8202	hgsc.bcm.edu	36	20	45715100	45715100	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZFP64	55734	hgsc.bcm.edu	36	20	50202200	50202200	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GCNT7	140687	hgsc.bcm.edu	36	20	54500244	54500244	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TFAP2C	7022	hgsc.bcm.edu	36	20	54639699	54639699	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STX16	8675	hgsc.bcm.edu	36	20	56684662	56684662	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TUBB1	203068	hgsc.bcm.edu	36	20	57032618	57032618	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LSM14B	149986	hgsc.bcm.edu	36	20	60134796	60134796	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LAMA5	3911	hgsc.bcm.edu	36	20	60323592	60323592	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLCO4A1	28231	hgsc.bcm.edu	36	20	60769947	60769947	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NTSR1	4923	hgsc.bcm.edu	36	20	60811500	60811500	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C20orf20	55257	hgsc.bcm.edu	36	20	60901366	60901366	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PRIC285	85441	hgsc.bcm.edu	36	20	61665990	61665990	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GMEB2	26205	hgsc.bcm.edu	36	20	61692087	61692087	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TCEA2	6919	hgsc.bcm.edu	36	20	62172102	62172102	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PRODH	5625	hgsc.bcm.edu	36	22	17285961	17285961	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DGCR2	9993	hgsc.bcm.edu	36	22	17409355	17409355	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DGCR2	9993	hgsc.bcm.edu	36	22	17432365	17432365	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DGCR14	8220	hgsc.bcm.edu	36	22	17512042	17512042	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TXNRD2	10587	hgsc.bcm.edu	36	22	18263031	18263031	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DGCR8	54487	hgsc.bcm.edu	36	22	18473738	18473738	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF74	7625	hgsc.bcm.edu	36	22	19090882	19090882	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ADRBK2	157	hgsc.bcm.edu	36	22	24444243	24444243	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNRF3	84133	hgsc.bcm.edu	36	22	27776744	27776744	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NF2	4771	hgsc.bcm.edu	36	22	28365141	28365141	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SMTN	6525	hgsc.bcm.edu	36	22	29816966	29816966	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYN3	8224	hgsc.bcm.edu	36	22	31590984	31590984	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LARGE	9215	hgsc.bcm.edu	36	22	32110260	32110260	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
POLR2F	5435	hgsc.bcm.edu	36	22	36685401	36685401	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SUN2	25777	hgsc.bcm.edu	36	22	37466317	37466317	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TNRC6B	23112	hgsc.bcm.edu	36	22	38990841	38990841	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EP300	2033	hgsc.bcm.edu	36	22	39903509	39903509	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CYP2D6	1565	hgsc.bcm.edu	36	22	40852934	40852934	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1644	85352	hgsc.bcm.edu	36	22	43012670	43012670	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PKDREJ	10343	hgsc.bcm.edu	36	22	45034367	45034367	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZBED4	9889	hgsc.bcm.edu	36	22	48666141	48666141	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SELO	83642	hgsc.bcm.edu	36	22	48997621	48997621	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PLXNB2	23654	hgsc.bcm.edu	36	22	49062250	49062250	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PLXNB2	23654	hgsc.bcm.edu	36	22	49070486	49070486	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ACR	49	hgsc.bcm.edu	36	22	49530052	49530052	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR11H4	390442	hgsc.bcm.edu	36	14	19781043	19781043	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC39A2	29986	hgsc.bcm.edu	36	14	20539067	20539067	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CHD8	57680	hgsc.bcm.edu	36	14	20941581	20941581	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CHD8	57680	hgsc.bcm.edu	36	14	20947951	20947951	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYH7	4625	hgsc.bcm.edu	36	14	22965859	22965859	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYH7	4625	hgsc.bcm.edu	36	14	22967612	22967612	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DHRS2	10202	hgsc.bcm.edu	36	14	23178251	23178251	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TM9SF1	10548	hgsc.bcm.edu	36	14	23729542	23729542	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TM9SF1	10548	hgsc.bcm.edu	36	14	23731725	23731725	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TM9SF1	10548	hgsc.bcm.edu	36	14	23732003	23732003	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RABGGTA	5875	hgsc.bcm.edu	36	14	23807464	23807464	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARHGAP5	394	hgsc.bcm.edu	36	14	31631047	31631047	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA0391	9692	hgsc.bcm.edu	36	14	34662870	34662870	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRFN5	145581	hgsc.bcm.edu	36	14	41425766	41425766	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SAMD4A	23034	hgsc.bcm.edu	36	14	54311431	54311431	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC35F4	341880	hgsc.bcm.edu	36	14	57108427	57108427	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYNE2	23224	hgsc.bcm.edu	36	14	63538430	63538430	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC8A3	6547	hgsc.bcm.edu	36	14	69600324	69600324	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SIPA1L1	26037	hgsc.bcm.edu	36	14	71207831	71207831	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RBM25	58517	hgsc.bcm.edu	36	14	72642415	72642415	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PAPLN	89932	hgsc.bcm.edu	36	14	72791013	72791013	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NUMB	8650	hgsc.bcm.edu	36	14	72813644	72813644	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DLST	1743	hgsc.bcm.edu	36	14	74430786	74430786	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANGEL1	23357	hgsc.bcm.edu	36	14	76325474	76325474	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMEM63C	57156	hgsc.bcm.edu	36	14	76785549	76785549	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NRXN3	9369	hgsc.bcm.edu	36	14	78187369	78187369	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FLRT2	23768	hgsc.bcm.edu	36	14	85158799	85158799	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPR65	8477	hgsc.bcm.edu	36	14	87547649	87547649	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1409	57578	hgsc.bcm.edu	36	14	93158262	93158262	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C14orf49	161176	hgsc.bcm.edu	36	14	94991787	94991787	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AK7	122481	hgsc.bcm.edu	36	14	95944992	95944992	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BCL11B	64919	hgsc.bcm.edu	36	14	98710404	98710404	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BCL11B	64919	hgsc.bcm.edu	36	14	98767505	98767505	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAGE	5891	hgsc.bcm.edu	36	14	101765424	101765424	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TECPR2	9895	hgsc.bcm.edu	36	14	101967929	101967929	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PPP1R13B	23368	hgsc.bcm.edu	36	14	103275082	103275082	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
INF2	64423	hgsc.bcm.edu	36	14	104251914	104251914	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AHNAK2	113146	hgsc.bcm.edu	36	14	104485513	104485513	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AHNAK2	113146	hgsc.bcm.edu	36	14	104485536	104485536	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CDCA4	55038	hgsc.bcm.edu	36	14	104549245	104549245	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMEM121	80757	hgsc.bcm.edu	36	14	105066337	105066337	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
POLRMT	5442	hgsc.bcm.edu	36	19	572775	572775	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABCA7	10347	hgsc.bcm.edu	36	19	997941	997941	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GAMT	2593	hgsc.bcm.edu	36	19	1350012	1350012	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TCF3	83439	hgsc.bcm.edu	36	19	1566741	1566741	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM108A1	81926	hgsc.bcm.edu	36	19	1832268	1832268	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC39A3	29985	hgsc.bcm.edu	36	19	2684324	2684324	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TLE6	79816	hgsc.bcm.edu	36	19	2940140	2940140	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TLE2	7089	hgsc.bcm.edu	36	19	2957466	2957466	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
S1PR4	8698	hgsc.bcm.edu	36	19	3130529	3130529	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZFR2	23217	hgsc.bcm.edu	36	19	3776361	3776361	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CREB3L3	84699	hgsc.bcm.edu	36	19	4110709	4110709	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMIGD2	126259	hgsc.bcm.edu	36	19	4249145	4249145	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CHAF1A	10036	hgsc.bcm.edu	36	19	4359902	4359902	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRG1	116844	hgsc.bcm.edu	36	19	4489725	4489725	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TICAM1	148022	hgsc.bcm.edu	36	19	4768605	4768605	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NRTN	4902	hgsc.bcm.edu	36	19	5775333	5775333	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RANBP3	8498	hgsc.bcm.edu	36	19	5868637	5868637	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ACSBG2	81616	hgsc.bcm.edu	36	19	6134180	6134180	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EMR1	2015	hgsc.bcm.edu	36	19	6870602	6870602	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1543	57662	hgsc.bcm.edu	36	19	7576158	7576158	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MAP2K7	5609	hgsc.bcm.edu	36	19	7882364	7882364	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MAP2K7	5609	hgsc.bcm.edu	36	19	7882406	7882406	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LASS4	79603	hgsc.bcm.edu	36	19	8225436	8225436	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MUC16	94025	hgsc.bcm.edu	36	19	8843211	8843211	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MUC16	94025	hgsc.bcm.edu	36	19	8921802	8921802	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MUC16	94025	hgsc.bcm.edu	36	19	8922840	8922840	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MUC16	94025	hgsc.bcm.edu	36	19	8929629	8929629	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MUC16	94025	hgsc.bcm.edu	36	19	8934805	8934805	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR7G2	390882	hgsc.bcm.edu	36	19	9074857	9074857	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KRI1	65095	hgsc.bcm.edu	36	19	10532046	10532046	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CCDC151	115948	hgsc.bcm.edu	36	19	11392514	11392514	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GCDH	2639	hgsc.bcm.edu	36	19	12869662	12869662	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAD23A	5886	hgsc.bcm.edu	36	19	12924545	12924545	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZSWIM4	65249	hgsc.bcm.edu	36	19	13780906	13780906	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LPHN1	22859	hgsc.bcm.edu	36	19	14128797	14128797	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TECR	0	hgsc.bcm.edu	36	19	14536032	14536032	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF333	84449	hgsc.bcm.edu	36	19	14688012	14688012	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ILVBL	10994	hgsc.bcm.edu	36	19	15089749	15089749	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CYP4F8	11283	hgsc.bcm.edu	36	19	15595853	15595853	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NWD1	284434	hgsc.bcm.edu	36	19	16763373	16763373	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
USE1	65264	hgsc.bcm.edu	36	19	17188091	17188091	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GLT25D1	79709	hgsc.bcm.edu	36	19	17544377	17544377	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GLT25D1	79709	hgsc.bcm.edu	36	19	17551364	17551364	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FCHO1	23149	hgsc.bcm.edu	36	19	17742351	17742351	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
JAK3	3718	hgsc.bcm.edu	36	19	17804473	17804473	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PDE4C	5143	hgsc.bcm.edu	36	19	18188677	18188677	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1683	80726	hgsc.bcm.edu	36	19	18237509	18237509	+	Missense_Mutation	SNP	G	G	A	rs16982285	byCluster;byFrequency;byHapMap	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FKBP8	23770	hgsc.bcm.edu	36	19	18509488	18509488	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UBA52	7311	hgsc.bcm.edu	36	19	18545132	18545132	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CRTC1	23373	hgsc.bcm.edu	36	19	18740545	18740545	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DDX49	54555	hgsc.bcm.edu	36	19	18900080	18900080	+	Silent	SNP	G	G	A	rs35412126	byFrequency	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARMC6	93436	hgsc.bcm.edu	36	19	19023909	19023909	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC25A42	284439	hgsc.bcm.edu	36	19	19079738	19079738	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF43	7594	hgsc.bcm.edu	36	19	21783303	21783303	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF99	7652	hgsc.bcm.edu	36	19	22732301	22732301	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF254	9534	hgsc.bcm.edu	36	19	24081278	24081278	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TSHZ3	57616	hgsc.bcm.edu	36	19	36460517	36460517	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CCDC123	84902	hgsc.bcm.edu	36	19	38100981	38100981	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPI	10007	hgsc.bcm.edu	36	19	39549561	39549561	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZFP14	57677	hgsc.bcm.edu	36	19	41523464	41523464	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR87	83889	hgsc.bcm.edu	36	19	43071272	43071272	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ACTN4	81	hgsc.bcm.edu	36	19	43911817	43911817	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SIRT2	22933	hgsc.bcm.edu	36	19	44066152	44066152	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MRPS12	65993	hgsc.bcm.edu	36	19	44115029	44115029	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PAF1	54623	hgsc.bcm.edu	36	19	44572156	44572156	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TIMM50	92609	hgsc.bcm.edu	36	19	44672211	44672211	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AKT2	208	hgsc.bcm.edu	36	19	45452988	45452988	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CEACAM3	90273	hgsc.bcm.edu	36	19	47006224	47006224	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PSG8	440533	hgsc.bcm.edu	36	19	47959941	47959941	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF155	7711	hgsc.bcm.edu	36	19	49192878	49192878	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF222	7673	hgsc.bcm.edu	36	19	49227919	49227919	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF234	10780	hgsc.bcm.edu	36	19	49353418	49353418	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PVR	5817	hgsc.bcm.edu	36	19	49842339	49842339	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PVRL2	5819	hgsc.bcm.edu	36	19	50069484	50069484	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DMWD	1762	hgsc.bcm.edu	36	19	50980808	50980808	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RSPH6A	0	hgsc.bcm.edu	36	19	51009672	51009672	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYMPK	8189	hgsc.bcm.edu	36	19	51024157	51024157	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC1A5	6510	hgsc.bcm.edu	36	19	51972417	51972417	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC8A2	6543	hgsc.bcm.edu	36	19	52632542	52632542	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NTN5	126147	hgsc.bcm.edu	36	19	53858845	53858845	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FUT2	2524	hgsc.bcm.edu	36	19	53898237	53898237	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HRC	3270	hgsc.bcm.edu	36	19	54349820	54349820	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RPS11	6205	hgsc.bcm.edu	36	19	54692652	54692652	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CPT1C	126129	hgsc.bcm.edu	36	19	54908521	54908521	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYH14	79784	hgsc.bcm.edu	36	19	55405657	55405657	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYH14	79784	hgsc.bcm.edu	36	19	55488634	55488634	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ASPDH	554235	hgsc.bcm.edu	36	19	55708079	55708079	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KLK1	3816	hgsc.bcm.edu	36	19	56014275	56014275	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF649	65251	hgsc.bcm.edu	36	19	57085831	57085831	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF350	59348	hgsc.bcm.edu	36	19	57163720	57163720	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF841	284371	hgsc.bcm.edu	36	19	57262479	57262479	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF468	388561	hgsc.bcm.edu	36	19	58036157	58036157	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYADM	91663	hgsc.bcm.edu	36	19	59069253	59069253	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LILRB1	10859	hgsc.bcm.edu	36	19	59840121	59840121	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIR3DL3	115653	hgsc.bcm.edu	36	19	59932898	59932898	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SBK2	646643	hgsc.bcm.edu	36	19	60739250	60739250	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NLRP4	147945	hgsc.bcm.edu	36	19	61070962	61070962	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF835	90485	hgsc.bcm.edu	36	19	61867232	61867232	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZSCAN22	342945	hgsc.bcm.edu	36	19	63542353	63542353	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
A1BG	1	hgsc.bcm.edu	36	19	63555529	63555529	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
XKR6	286046	hgsc.bcm.edu	36	8	10793707	10793707	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MTMR9	66036	hgsc.bcm.edu	36	8	11204516	11204516	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TUSC3	7991	hgsc.bcm.edu	36	8	15442339	15442339	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SH2D4A	63898	hgsc.bcm.edu	36	8	19265865	19265865	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PHYHIP	9796	hgsc.bcm.edu	36	8	22135190	22135190	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LOXL2	4017	hgsc.bcm.edu	36	8	23230473	23230473	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ADRA1A	148	hgsc.bcm.edu	36	8	26684041	26684041	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TRIM35	23087	hgsc.bcm.edu	36	8	27207720	27207720	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SCARA3	51435	hgsc.bcm.edu	36	8	27572500	27572500	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TEX15	56154	hgsc.bcm.edu	36	8	30824437	30824437	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FNTA	2339	hgsc.bcm.edu	36	8	43038416	43038416	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PXDNL	137902	hgsc.bcm.edu	36	8	52484168	52484168	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RP1	10982	hgsc.bcm.edu	36	8	55705156	55705156	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
XKR4	114786	hgsc.bcm.edu	36	8	56598984	56598984	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NSMAF	8439	hgsc.bcm.edu	36	8	59698496	59698496	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PKIA	5569	hgsc.bcm.edu	36	8	79673225	79673225	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MRPS28	60488	hgsc.bcm.edu	36	8	81077877	81077877	+	Missense_Mutation	SNP	G	G	A	rs16919579	byCluster;byFrequency;byHapMap	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1429	25962	hgsc.bcm.edu	36	8	95587932	95587932	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
INTS8	55656	hgsc.bcm.edu	36	8	95947031	95947031	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
VPS13B	157680	hgsc.bcm.edu	36	8	100802431	100802431	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC25A32	81034	hgsc.bcm.edu	36	8	104496259	104496259	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANGPT1	284	hgsc.bcm.edu	36	8	108375352	108375352	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TRPS1	7227	hgsc.bcm.edu	36	8	116685456	116685456	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MTBP	27085	hgsc.bcm.edu	36	8	121535278	121535278	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZHX2	22882	hgsc.bcm.edu	36	8	124034951	124034951	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA0196	9897	hgsc.bcm.edu	36	8	126140718	126140718	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NSMCE2	286053	hgsc.bcm.edu	36	8	126448195	126448195	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OC90	729330	hgsc.bcm.edu	36	8	133122569	133122569	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KCNQ3	3786	hgsc.bcm.edu	36	8	133219358	133219358	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PLEC	0	hgsc.bcm.edu	36	8	145063567	145063567	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UBE2J2	118424	hgsc.bcm.edu	36	1	1180458	1180458	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DVL1	8215	hgsc.bcm.edu	36	1	1267945	1267945	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ATAD3C	219293	hgsc.bcm.edu	36	1	1393650	1393650	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GNB1	2782	hgsc.bcm.edu	36	1	1711874	1711874	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1751	85452	hgsc.bcm.edu	36	1	1895417	1895417	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MORN1	79906	hgsc.bcm.edu	36	1	2242857	2242857	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PRDM16	63976	hgsc.bcm.edu	36	1	3338464	3338464	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA0562	9731	hgsc.bcm.edu	36	1	3746082	3746082	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C1orf174	339448	hgsc.bcm.edu	36	1	3796483	3796483	+	Silent	SNP	C	C	T	rs11809187	byCluster;byFrequency	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PHF13	148479	hgsc.bcm.edu	36	1	6604112	6604112	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PHF13	148479	hgsc.bcm.edu	36	1	6604158	6604158	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PER3	8863	hgsc.bcm.edu	36	1	7792610	7792610	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIF1B	23095	hgsc.bcm.edu	36	1	10279648	10279648	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PGD	26227	hgsc.bcm.edu	36	1	10401477	10401477	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FHAD1	114827	hgsc.bcm.edu	36	1	15450871	15450871	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CROCC	9696	hgsc.bcm.edu	36	1	17123531	17123531	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RCC2	55920	hgsc.bcm.edu	36	1	17615691	17615691	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PQLC2	54896	hgsc.bcm.edu	36	1	19523755	19523755	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMCO4	255104	hgsc.bcm.edu	36	1	19969626	19969626	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
VWA5B1	127731	hgsc.bcm.edu	36	1	20516642	20516642	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MUL1	79594	hgsc.bcm.edu	36	1	20700297	20700297	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ECE1	1889	hgsc.bcm.edu	36	1	21446372	21446372	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NBPF3	84224	hgsc.bcm.edu	36	1	21669794	21669794	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALPL	249	hgsc.bcm.edu	36	1	21762346	21762346	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CELA3A	10136	hgsc.bcm.edu	36	1	22206581	22206581	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYOM3	127294	hgsc.bcm.edu	36	1	24306212	24306212	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PAFAH2	5051	hgsc.bcm.edu	36	1	26173723	26173723	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RPS6KA1	6195	hgsc.bcm.edu	36	1	26745954	26745954	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARID1A	8289	hgsc.bcm.edu	36	1	26974146	26974146	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARID1A	8289	hgsc.bcm.edu	36	1	26978941	26978941	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC9A1	6548	hgsc.bcm.edu	36	1	27313242	27313242	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AHDC1	27245	hgsc.bcm.edu	36	1	27746563	27746563	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
YTHDF2	51441	hgsc.bcm.edu	36	1	28942924	28942924	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTPRU	10076	hgsc.bcm.edu	36	1	29481915	29481915	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZBTB8B	728116	hgsc.bcm.edu	36	1	32709353	32709353	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PHC2	1912	hgsc.bcm.edu	36	1	33609220	33609220	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C1orf94	84970	hgsc.bcm.edu	36	1	34446367	34446367	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA0319L	79932	hgsc.bcm.edu	36	1	35709117	35709117	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EIF2C4	192670	hgsc.bcm.edu	36	1	36079475	36079475	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MACF1	23499	hgsc.bcm.edu	36	1	39626441	39626441	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLDN19	149461	hgsc.bcm.edu	36	1	42976825	42976825	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TIE1	7075	hgsc.bcm.edu	36	1	43556286	43556286	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C1orf228	339541	hgsc.bcm.edu	36	1	44962484	44962484	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UROD	7389	hgsc.bcm.edu	36	1	45252709	45252709	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MMACHC	25974	hgsc.bcm.edu	36	1	45746526	45746526	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CDKN2C	1031	hgsc.bcm.edu	36	1	51208757	51208757	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTC39A	22996	hgsc.bcm.edu	36	1	51539867	51539867	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZCCHC11	23318	hgsc.bcm.edu	36	1	52684098	52684098	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ITGB3BP	23421	hgsc.bcm.edu	36	1	63692724	63692724	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CACHD1	57685	hgsc.bcm.edu	36	1	64872498	64872498	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM73A	374986	hgsc.bcm.edu	36	1	78097232	78097232	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LPHN2	23266	hgsc.bcm.edu	36	1	82220108	82220108	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SSX2IP	117178	hgsc.bcm.edu	36	1	84888788	84888788	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLCA4	22802	hgsc.bcm.edu	36	1	86813637	86813637	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GBP6	163351	hgsc.bcm.edu	36	1	89622426	89622426	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BCAR3	8412	hgsc.bcm.edu	36	1	93805920	93805920	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABCA4	24	hgsc.bcm.edu	36	1	94280975	94280975	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
S1PR1	1901	hgsc.bcm.edu	36	1	101477900	101477900	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FNDC7	163479	hgsc.bcm.edu	36	1	109062032	109062032	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1324	57535	hgsc.bcm.edu	36	1	109541782	109541782	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CELSR2	1952	hgsc.bcm.edu	36	1	109613033	109613033	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RBM15	64783	hgsc.bcm.edu	36	1	110684707	110684707	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DRAM2	128338	hgsc.bcm.edu	36	1	111470437	111470437	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WNT2B	7482	hgsc.bcm.edu	36	1	112861462	112861462	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HIPK1	204851	hgsc.bcm.edu	36	1	114317363	114317363	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NRAS	4893	hgsc.bcm.edu	36	1	115058032	115058032	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NGF	4803	hgsc.bcm.edu	36	1	115630795	115630795	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SPAG17	200162	hgsc.bcm.edu	36	1	118384982	118384982	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NBPF16	728936	hgsc.bcm.edu	36	1	146861096	146861096	+	Silent	SNP	G	G	A	rs1043752	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GABPB2	126626	hgsc.bcm.edu	36	1	149337044	149337044	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PI4KB	5298	hgsc.bcm.edu	36	1	149546710	149546710	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RPTN	126638	hgsc.bcm.edu	36	1	150393865	150393865	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HRNR	388697	hgsc.bcm.edu	36	1	150459022	150459022	+	Silent	SNP	T	T	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CRTC2	200186	hgsc.bcm.edu	36	1	152190448	152190448	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UBAP2L	9898	hgsc.bcm.edu	36	1	152473829	152473829	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SHC1	6464	hgsc.bcm.edu	36	1	153202913	153202913	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DCST2	127579	hgsc.bcm.edu	36	1	153265686	153265686	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HCN3	57657	hgsc.bcm.edu	36	1	153524496	153524496	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC25A44	9673	hgsc.bcm.edu	36	1	154446692	154446692	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BCAN	63827	hgsc.bcm.edu	36	1	154883445	154883445	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
INSRR	3645	hgsc.bcm.edu	36	1	155088346	155088346	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLAMF1	6504	hgsc.bcm.edu	36	1	158883291	158883291	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
POU2F1	5451	hgsc.bcm.edu	36	1	165610058	165610058	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FMO4	2329	hgsc.bcm.edu	36	1	169567474	169567474	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RASAL2	9462	hgsc.bcm.edu	36	1	176681373	176681373	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABL2	27	hgsc.bcm.edu	36	1	177344835	177344835	+	Silent	SNP	G	G	A	rs28913888	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABL2	27	hgsc.bcm.edu	36	1	177350640	177350640	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LAMC1	3915	hgsc.bcm.edu	36	1	181366222	181366222	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LAMC2	3918	hgsc.bcm.edu	36	1	181454236	181454236	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NMNAT2	23057	hgsc.bcm.edu	36	1	181497018	181497018	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PRG4	23572	hgsc.bcm.edu	36	1	184537382	184537382	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM5C	339479	hgsc.bcm.edu	36	1	188334279	188334279	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZBTB41	360023	hgsc.bcm.edu	36	1	195414188	195414188	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CAMSAP1L1	23271	hgsc.bcm.edu	36	1	199085528	199085528	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TNNT2	7139	hgsc.bcm.edu	36	1	199601371	199601371	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PPP1R12B	4660	hgsc.bcm.edu	36	1	200731395	200731395	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NFASC	23114	hgsc.bcm.edu	36	1	203223192	203223192	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PIGR	5284	hgsc.bcm.edu	36	1	205179291	205179291	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KCNH1	3756	hgsc.bcm.edu	36	1	208923394	208923394	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANGEL2	90806	hgsc.bcm.edu	36	1	211245182	211245182	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CENPF	1063	hgsc.bcm.edu	36	1	212885846	212885846	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IARS2	55699	hgsc.bcm.edu	36	1	218387545	218387545	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BROX	0	hgsc.bcm.edu	36	1	220967145	220967145	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR26	80232	hgsc.bcm.edu	36	1	222678897	222678897	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNAH14	127602	hgsc.bcm.edu	36	1	223406356	223406356	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PYCR2	29920	hgsc.bcm.edu	36	1	224176328	224176328	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PARP1	142	hgsc.bcm.edu	36	1	224631501	224631501	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OBSCN	84033	hgsc.bcm.edu	36	1	226533668	226533668	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OBSCN	84033	hgsc.bcm.edu	36	1	226547711	226547711	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OBSCN	84033	hgsc.bcm.edu	36	1	226614589	226614589	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SIPA1L2	57568	hgsc.bcm.edu	36	1	230716596	230716596	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MTR	4548	hgsc.bcm.edu	36	1	235121076	235121076	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CHML	1122	hgsc.bcm.edu	36	1	239864485	239864485	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EXO1	9156	hgsc.bcm.edu	36	1	240109021	240109021	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CEP170	9859	hgsc.bcm.edu	36	1	241415921	241415921	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF695	57116	hgsc.bcm.edu	36	1	245217383	245217383	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR13G1	441933	hgsc.bcm.edu	36	1	245902291	245902291	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR2T3	343173	hgsc.bcm.edu	36	1	246703589	246703589	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR2G6	391211	hgsc.bcm.edu	36	1	246751918	246751918	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF672	79894	hgsc.bcm.edu	36	1	247108208	247108208	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRRC56	115399	hgsc.bcm.edu	36	11	530736	530736	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EPS8L2	64787	hgsc.bcm.edu	36	11	712484	712484	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MUC2	4583	hgsc.bcm.edu	36	11	1088725	1088725	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MUC5B	727897	hgsc.bcm.edu	36	11	1225725	1225725	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MUC5B	727897	hgsc.bcm.edu	36	11	1226946	1226946	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TNNI2	7136	hgsc.bcm.edu	36	11	1818950	1818950	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TH	7054	hgsc.bcm.edu	36	11	2146410	2146410	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR52E2	119678	hgsc.bcm.edu	36	11	5036751	5036751	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR52E4	390081	hgsc.bcm.edu	36	11	5862752	5862752	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR56A1	120796	hgsc.bcm.edu	36	11	6005304	6005304	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYT9	143425	hgsc.bcm.edu	36	11	7395802	7395802	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LYVE1	10894	hgsc.bcm.edu	36	11	10542440	10542440	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PDE3B	5140	hgsc.bcm.edu	36	11	14839383	14839383	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SOX6	55553	hgsc.bcm.edu	36	11	15967244	15967244	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LDHC	3948	hgsc.bcm.edu	36	11	18416718	18416718	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IGSF22	283284	hgsc.bcm.edu	36	11	18697888	18697888	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NAV2	89797	hgsc.bcm.edu	36	11	19911491	19911491	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANO3	63982	hgsc.bcm.edu	36	11	26638460	26638460	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LGR4	55366	hgsc.bcm.edu	36	11	27346064	27346064	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABTB2	25841	hgsc.bcm.edu	36	11	34137452	34137452	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC35C1	55343	hgsc.bcm.edu	36	11	45789033	45789033	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CRY2	1408	hgsc.bcm.edu	36	11	45847685	45847685	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRP4	4038	hgsc.bcm.edu	36	11	46874337	46874337	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR4A16	81327	hgsc.bcm.edu	36	11	54867442	54867442	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR4C15	81309	hgsc.bcm.edu	36	11	55079254	55079254	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR5L2	26338	hgsc.bcm.edu	36	11	55351473	55351473	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR5J2	282775	hgsc.bcm.edu	36	11	55701168	55701168	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SSRP1	6749	hgsc.bcm.edu	36	11	56851821	56851821	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLP1	81035	hgsc.bcm.edu	36	11	57184028	57184028	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZFP91	80829	hgsc.bcm.edu	36	11	58141539	58141539	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MRPL16	54948	hgsc.bcm.edu	36	11	59330557	59330557	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C11orf66	220004	hgsc.bcm.edu	36	11	61014594	61014594	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
INCENP	3619	hgsc.bcm.edu	36	11	61652220	61652220	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ASRGL1	80150	hgsc.bcm.edu	36	11	61915605	61915605	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UBXN1	51035	hgsc.bcm.edu	36	11	62202091	62202091	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC22A10	387775	hgsc.bcm.edu	36	11	62821412	62821412	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SNX15	29907	hgsc.bcm.edu	36	11	64556557	64556557	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NAALADL1	10004	hgsc.bcm.edu	36	11	64569474	64569474	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TM7SF2	7108	hgsc.bcm.edu	36	11	64638996	64638996	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EHBP1L1	254102	hgsc.bcm.edu	36	11	65108363	65108363	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KCNK7	10089	hgsc.bcm.edu	36	11	65119598	65119598	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MRPL11	65003	hgsc.bcm.edu	36	11	65961276	65961276	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PELI3	246330	hgsc.bcm.edu	36	11	65999714	65999714	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KDM2A	22992	hgsc.bcm.edu	36	11	66774275	66774275	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SSH3	54961	hgsc.bcm.edu	36	11	66831646	66831646	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SSH3	54961	hgsc.bcm.edu	36	11	66832327	66832327	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SUV420H1	51111	hgsc.bcm.edu	36	11	67682380	67682380	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TPCN2	219931	hgsc.bcm.edu	36	11	68586935	68586935	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SHANK2	22941	hgsc.bcm.edu	36	11	69996967	69996967	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C11orf59	55004	hgsc.bcm.edu	36	11	71487938	71487938	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UCP2	7351	hgsc.bcm.edu	36	11	73366762	73366762	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CHRDL2	25884	hgsc.bcm.edu	36	11	74099614	74099614	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCF11	51585	hgsc.bcm.edu	36	11	82573495	82573495	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ME3	56110	hgsc.bcm.edu	36	11	85839046	85839046	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MMP12	4321	hgsc.bcm.edu	36	11	102239095	102239095	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MMP13	4322	hgsc.bcm.edu	36	11	102320248	102320248	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C11orf93	0	hgsc.bcm.edu	36	11	110684064	110684064	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMPRSS5	80975	hgsc.bcm.edu	36	11	113075604	113075604	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IL10RA	3587	hgsc.bcm.edu	36	11	117365480	117365480	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MPZL2	10205	hgsc.bcm.edu	36	11	117633206	117633206	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MLL	4297	hgsc.bcm.edu	36	11	117857804	117857804	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BCL9L	283149	hgsc.bcm.edu	36	11	118275897	118275897	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MCAM	4162	hgsc.bcm.edu	36	11	118687495	118687495	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OAF	220323	hgsc.bcm.edu	36	11	119602744	119602744	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
POU2F3	25833	hgsc.bcm.edu	36	11	119681601	119681601	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GRAMD1B	57476	hgsc.bcm.edu	36	11	122979439	122979439	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CDON	50937	hgsc.bcm.edu	36	11	125356286	125356286	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ST14	6768	hgsc.bcm.edu	36	11	129574149	129574149	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IGSF9B	22997	hgsc.bcm.edu	36	11	133306623	133306623	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IGSF9B	22997	hgsc.bcm.edu	36	11	133321188	133321188	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NCAPD3	23310	hgsc.bcm.edu	36	11	133552497	133552497	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GMDS	2762	hgsc.bcm.edu	36	6	2062771	2062771	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RREB1	6239	hgsc.bcm.edu	36	6	7176214	7176214	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
JARID2	3720	hgsc.bcm.edu	36	6	15605167	15605167	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GMPR	2766	hgsc.bcm.edu	36	6	16355074	16355074	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HIST1H2BG	8339	hgsc.bcm.edu	36	6	26324730	26324730	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BTN2A2	10385	hgsc.bcm.edu	36	6	26496383	26496383	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BTN2A2	10385	hgsc.bcm.edu	36	6	26500697	26500697	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PRRC2A	0	hgsc.bcm.edu	36	6	31701244	31701244	+	Silent	SNP	G	G	T	rs17200837	byCluster;byFrequency	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HLA-DRB5	3127	hgsc.bcm.edu	36	6	32605972	32605972	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HLA-DQB1	3120	hgsc.bcm.edu	36	6	32737868	32737868	+	Missense_Mutation	SNP	G	G	A	rs9275338	byCluster;byFrequency;byHapMap	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ITPR3	3710	hgsc.bcm.edu	36	6	33739627	33739627	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ITPR3	3710	hgsc.bcm.edu	36	6	33761860	33761860	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TAF11	6882	hgsc.bcm.edu	36	6	34955740	34955740	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC29A1	2030	hgsc.bcm.edu	36	6	44306127	44306127	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AARS2	57505	hgsc.bcm.edu	36	6	44382723	44382723	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DEFB113	245927	hgsc.bcm.edu	36	6	50044482	50044482	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MCM3	4172	hgsc.bcm.edu	36	6	52255513	52255513	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DST	667	hgsc.bcm.edu	36	6	56614774	56614774	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
COL12A1	1303	hgsc.bcm.edu	36	6	75899794	75899794	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PRSS35	167681	hgsc.bcm.edu	36	6	84290937	84290937	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CNR1	56144	hgsc.bcm.edu	36	6	88911234	88911234	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MDN1	23195	hgsc.bcm.edu	36	6	90489517	90489517	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EPHA7	2045	hgsc.bcm.edu	36	6	94022437	94022437	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FOXO3	2309	hgsc.bcm.edu	36	6	109091677	109091677	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AKD1	221264	hgsc.bcm.edu	36	6	110087254	110087254	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GTF3C6	112495	hgsc.bcm.edu	36	6	111395509	111395509	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FYN	2534	hgsc.bcm.edu	36	6	112130909	112130909	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C6orf170	221322	hgsc.bcm.edu	36	6	121680381	121680381	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1244	57221	hgsc.bcm.edu	36	6	138624375	138624375	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LTV1	84946	hgsc.bcm.edu	36	6	144207332	144207332	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UTRN	7402	hgsc.bcm.edu	36	6	144939947	144939947	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYNE1	23345	hgsc.bcm.edu	36	6	152517833	152517833	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYNE1	23345	hgsc.bcm.edu	36	6	152596619	152596619	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYNE1	23345	hgsc.bcm.edu	36	6	152671450	152671450	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYNE1	23345	hgsc.bcm.edu	36	6	152689158	152689158	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NOX3	50508	hgsc.bcm.edu	36	6	155791811	155791811	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RPS6KA2	6196	hgsc.bcm.edu	36	6	166782217	166782217	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
THBS2	7058	hgsc.bcm.edu	36	6	169367259	169367259	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TIMM22	29928	hgsc.bcm.edu	36	17	848804	848804	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABR	29	hgsc.bcm.edu	36	17	906095	906095	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABR	29	hgsc.bcm.edu	36	17	975330	975330	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RPA1	25885	hgsc.bcm.edu	36	17	1729355	1729355	+	Missense_Mutation	SNP	G	G	A	rs55800538	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SRR	63826	hgsc.bcm.edu	36	17	2165723	2165723	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PAFAH1B1	5048	hgsc.bcm.edu	36	17	2530317	2530317	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR1G1	8390	hgsc.bcm.edu	36	17	2976858	2976858	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TRPV3	162514	hgsc.bcm.edu	36	17	3382974	3382974	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANKFY1	51479	hgsc.bcm.edu	36	17	4056498	4056498	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PELP1	27043	hgsc.bcm.edu	36	17	4522659	4522659	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GP1BA	2811	hgsc.bcm.edu	36	17	4778562	4778562	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NLRP1	22861	hgsc.bcm.edu	36	17	5427776	5427776	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DLG4	3996	hgsc.bcm.edu	36	17	7052250	7052250	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C17orf81	23587	hgsc.bcm.edu	36	17	7101068	7101068	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC2A4	6517	hgsc.bcm.edu	36	17	7128367	7128367	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PLSCR3	57048	hgsc.bcm.edu	36	17	7237518	7237518	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CHRNB1	1140	hgsc.bcm.edu	36	17	7290920	7290920	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TP53	7157	hgsc.bcm.edu	36	17	7517795	7517795	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNAH2	146754	hgsc.bcm.edu	36	17	7577244	7577244	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PFAS	5198	hgsc.bcm.edu	36	17	8100625	8100625	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYH10	4628	hgsc.bcm.edu	36	17	8365322	8365322	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYH13	8735	hgsc.bcm.edu	36	17	10204103	10204103	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNAH9	1770	hgsc.bcm.edu	36	17	11628489	11628489	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TRIM16	10626	hgsc.bcm.edu	36	17	15475711	15475711	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYO15A	51168	hgsc.bcm.edu	36	17	17977310	17977310	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FBXW10	10517	hgsc.bcm.edu	36	17	18622818	18622818	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MAP2K3	5606	hgsc.bcm.edu	36	17	21156126	21156126	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC13A2	9058	hgsc.bcm.edu	36	17	23845648	23845648	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA0100	9703	hgsc.bcm.edu	36	17	23975410	23975410	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYO18A	399687	hgsc.bcm.edu	36	17	24444136	24444136	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NF1	4763	hgsc.bcm.edu	36	17	26703476	26703476	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PSMD11	5717	hgsc.bcm.edu	36	17	27820144	27820144	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SPACA3	124912	hgsc.bcm.edu	36	17	28348896	28348896	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UNC45B	146862	hgsc.bcm.edu	36	17	30501275	30501275	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MMP28	79148	hgsc.bcm.edu	36	17	31130189	31130189	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MLLT6	4302	hgsc.bcm.edu	36	17	34119048	34119048	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PLXDC1	57125	hgsc.bcm.edu	36	17	34493294	34493294	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CACNB1	782	hgsc.bcm.edu	36	17	34593906	34593906	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ERBB2	2064	hgsc.bcm.edu	36	17	35137734	35137734	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTRF	284119	hgsc.bcm.edu	36	17	37810842	37810842	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TUBG2	27175	hgsc.bcm.edu	36	17	38071713	38071713	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RUNDC1	146923	hgsc.bcm.edu	36	17	38396668	38396668	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DCAKD	79877	hgsc.bcm.edu	36	17	40457560	40457560	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1267	284058	hgsc.bcm.edu	36	17	41499798	41499798	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1267	284058	hgsc.bcm.edu	36	17	41605145	41605145	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WNT3	7473	hgsc.bcm.edu	36	17	42202376	42202376	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SNX11	29916	hgsc.bcm.edu	36	17	43551129	43551129	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF652	22834	hgsc.bcm.edu	36	17	44749819	44749819	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NGFR	4804	hgsc.bcm.edu	36	17	44944356	44944356	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SPATA20	64847	hgsc.bcm.edu	36	17	45984539	45984539	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WFIKKN2	124857	hgsc.bcm.edu	36	17	46272432	46272432	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANKFN1	162282	hgsc.bcm.edu	36	17	51807043	51807043	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RNF43	54894	hgsc.bcm.edu	36	17	53795903	53795903	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TANC2	26115	hgsc.bcm.edu	36	17	58632031	58632031	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FTSJ3	117246	hgsc.bcm.edu	36	17	59256403	59256403	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRRC37A3	374819	hgsc.bcm.edu	36	17	60287460	60287460	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PSMD12	5718	hgsc.bcm.edu	36	17	62776816	62776816	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CDC42EP4	23580	hgsc.bcm.edu	36	17	68793727	68793727	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNAI2	64446	hgsc.bcm.edu	36	17	69789594	69789594	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OTOP2	92736	hgsc.bcm.edu	36	17	70438500	70438500	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AANAT	15	hgsc.bcm.edu	36	17	71977480	71977480	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SEPT9	10801	hgsc.bcm.edu	36	17	72910073	72910073	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RNF213	57674	hgsc.bcm.edu	36	17	75934758	75934758	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NPTX1	4884	hgsc.bcm.edu	36	17	76060235	76060235	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAC3	8202	hgsc.bcm.edu	36	17	77584926	77584926	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAC3	8202	hgsc.bcm.edu	36	17	77584986	77584986	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FOXK2	3607	hgsc.bcm.edu	36	17	78138264	78138264	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TBCD	6904	hgsc.bcm.edu	36	17	78421543	78421543	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CXADR	1525	hgsc.bcm.edu	36	21	17807340	17807340	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLDN8	9073	hgsc.bcm.edu	36	21	30509890	30509890	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HUNK	30811	hgsc.bcm.edu	36	21	32293146	32293146	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C21orf63	59271	hgsc.bcm.edu	36	21	32809217	32809217	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GCFC1	0	hgsc.bcm.edu	36	21	33049432	33049432	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ATP5O	539	hgsc.bcm.edu	36	21	34206470	34206470	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM3B	54097	hgsc.bcm.edu	36	21	41640886	41640886	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC37A1	54020	hgsc.bcm.edu	36	21	42840285	42840285	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TRPM2	7226	hgsc.bcm.edu	36	21	44679456	44679456	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
COL18A1	80781	hgsc.bcm.edu	36	21	45733840	45733840	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
POLR3K	51728	hgsc.bcm.edu	36	16	37443	37443	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RHBDF1	64285	hgsc.bcm.edu	36	16	48363	48363	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SOLH	6650	hgsc.bcm.edu	36	16	543487	543487	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MSLNL	401827	hgsc.bcm.edu	36	16	770487	770487	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C16orf42	115939	hgsc.bcm.edu	36	16	1339552	1339552	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLCN7	1186	hgsc.bcm.edu	36	16	1449125	1449125	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IFT140	9742	hgsc.bcm.edu	36	16	1516772	1516772	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HS3ST6	64711	hgsc.bcm.edu	36	16	1901804	1901804	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PKD1	5310	hgsc.bcm.edu	36	16	2106610	2106610	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
E4F1	1877	hgsc.bcm.edu	36	16	2224271	2224271	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF174	7727	hgsc.bcm.edu	36	16	3394512	3394512	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF597	146434	hgsc.bcm.edu	36	16	3426730	3426730	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLUAP1	23059	hgsc.bcm.edu	36	16	3494747	3494747	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ADCY9	115	hgsc.bcm.edu	36	16	3956321	3956321	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CORO7	79585	hgsc.bcm.edu	36	16	4354806	4354806	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLEC16A	23274	hgsc.bcm.edu	36	16	11122017	11122017	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GSPT1	2935	hgsc.bcm.edu	36	16	11877279	11877279	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYH11	4629	hgsc.bcm.edu	36	16	15751641	15751641	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PALB2	79728	hgsc.bcm.edu	36	16	23553911	23553911	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TNRC6A	27327	hgsc.bcm.edu	36	16	24739166	24739166	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IL4R	3566	hgsc.bcm.edu	36	16	27260980	27260980	+	Silent	SNP	C	C	T	rs17548704	byCluster;byFrequency	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GTF3C1	2975	hgsc.bcm.edu	36	16	27388209	27388209	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SULT1A1	6817	hgsc.bcm.edu	36	16	28524688	28524688	+	Silent	SNP	C	C	T	rs4149411	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RABEP2	79874	hgsc.bcm.edu	36	16	28833232	28833232	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TBX6	6911	hgsc.bcm.edu	36	16	30005374	30005374	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ITGAL	3683	hgsc.bcm.edu	36	16	30424083	30424083	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LPCAT2	54947	hgsc.bcm.edu	36	16	54170531	54170531	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CPNE2	221184	hgsc.bcm.edu	36	16	55737527	55737527	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CNGB1	1258	hgsc.bcm.edu	36	16	56549849	56549849	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CMTM3	123920	hgsc.bcm.edu	36	16	65201347	65201347	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CES2	8824	hgsc.bcm.edu	36	16	65535323	65535323	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PLEKHG4	25894	hgsc.bcm.edu	36	16	65878312	65878312	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RANBP10	57610	hgsc.bcm.edu	36	16	66320782	66320782	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DPEP3	64180	hgsc.bcm.edu	36	16	66568741	66568741	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NQO1	1728	hgsc.bcm.edu	36	16	68309898	68309898	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLEC18C	283971	hgsc.bcm.edu	36	16	68768782	68768782	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HYDIN	54768	hgsc.bcm.edu	36	16	69551081	69551081	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ATXN1L	342371	hgsc.bcm.edu	36	16	70441726	70441726	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PKD1L3	342372	hgsc.bcm.edu	36	16	70541555	70541555	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HP	10395	hgsc.bcm.edu	36	16	70652150	70652150	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZFHX3	463	hgsc.bcm.edu	36	16	71550933	71550933	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BCMO1	53630	hgsc.bcm.edu	36	16	79853326	79853326	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA0182	23199	hgsc.bcm.edu	36	16	84254172	84254172	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF469	84627	hgsc.bcm.edu	36	16	87025973	87025973	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF469	84627	hgsc.bcm.edu	36	16	87030519	87030519	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANKRD11	29123	hgsc.bcm.edu	36	16	87862539	87862539	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CHMP1A	5119	hgsc.bcm.edu	36	16	88243301	88243301	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LAMA1	284217	hgsc.bcm.edu	36	18	7022076	7022076	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LAMA1	284217	hgsc.bcm.edu	36	18	7027643	7027643	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAB12	201475	hgsc.bcm.edu	36	18	8625586	8625586	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TUBB6	84617	hgsc.bcm.edu	36	18	12315769	12315769	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MC2R	4158	hgsc.bcm.edu	36	18	13874765	13874765	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GREB1L	0	hgsc.bcm.edu	36	18	17347864	17347864	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CDH2	1000	hgsc.bcm.edu	36	18	23819018	23819018	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
B4GALT6	9331	hgsc.bcm.edu	36	18	27472693	27472693	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TRAPPC8	0	hgsc.bcm.edu	36	18	27673301	27673301	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FHOD3	91010	hgsc.bcm.edu	36	18	32445949	32445949	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYO5B	4645	hgsc.bcm.edu	36	18	45617123	45617123	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYO5B	4645	hgsc.bcm.edu	36	18	45675507	45675507	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CXXC1	30827	hgsc.bcm.edu	36	18	46064099	46064099	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SMAD4	4089	hgsc.bcm.edu	36	18	46857020	46857020	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR7	23335	hgsc.bcm.edu	36	18	52599876	52599876	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ONECUT2	9480	hgsc.bcm.edu	36	18	53294786	53294786	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MC4R	4160	hgsc.bcm.edu	36	18	56189589	56189589	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1468	57614	hgsc.bcm.edu	36	18	58076767	58076767	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF236	7776	hgsc.bcm.edu	36	18	72749414	72749414	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BHLHE40	8553	hgsc.bcm.edu	36	3	4999963	4999963	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARL8B	55207	hgsc.bcm.edu	36	3	5188837	5188837	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAD18	56852	hgsc.bcm.edu	36	3	8919106	8919106	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TSEN2	80746	hgsc.bcm.edu	36	3	12535568	12535568	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAF1	5894	hgsc.bcm.edu	36	3	12635103	12635103	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CAND2	23066	hgsc.bcm.edu	36	3	12834302	12834302	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RPL32	6161	hgsc.bcm.edu	36	3	12856730	12856730	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FGD5	152273	hgsc.bcm.edu	36	3	14836543	14836543	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BTD	221833	hgsc.bcm.edu	36	3	15652125	15652125	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
THRB	7068	hgsc.bcm.edu	36	3	24144189	24144189	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MLH1	4292	hgsc.bcm.edu	36	3	37064135	37064135	+	Missense_Mutation	SNP	A	A	G	rs63750449	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PLCD1	5333	hgsc.bcm.edu	36	3	38027744	38027744	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ACAA1	30	hgsc.bcm.edu	36	3	38144320	38144320	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KBTBD5	131377	hgsc.bcm.edu	36	3	42705196	42705196	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FYCO1	79443	hgsc.bcm.edu	36	3	45984985	45984985	+	Missense_Mutation	SNP	C	C	T	rs9875356	byCluster;byFrequency;byHapMap	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LTF	4057	hgsc.bcm.edu	36	3	46455927	46455927	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALS2CL	259173	hgsc.bcm.edu	36	3	46697892	46697892	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTPN23	25930	hgsc.bcm.edu	36	3	47428366	47428366	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
COL7A1	1294	hgsc.bcm.edu	36	3	48590936	48590936	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
QRICH1	54870	hgsc.bcm.edu	36	3	49069845	49069845	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
QARS	5859	hgsc.bcm.edu	36	3	49110794	49110794	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
USP19	10869	hgsc.bcm.edu	36	3	49124790	49124790	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LAMB2	84823	hgsc.bcm.edu	36	3	49144711	49144711	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
USP4	7375	hgsc.bcm.edu	36	3	49306977	49306977	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
APEH	327	hgsc.bcm.edu	36	3	49687690	49687690	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RNF123	63891	hgsc.bcm.edu	36	3	49733073	49733073	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HEMK1	51409	hgsc.bcm.edu	36	3	50590297	50590297	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAD54L2	23132	hgsc.bcm.edu	36	3	51638512	51638512	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TLR9	54106	hgsc.bcm.edu	36	3	52230993	52230993	+	Silent	SNP	C	C	T	rs55919832	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNAH1	25981	hgsc.bcm.edu	36	3	52358289	52358289	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NISCH	11188	hgsc.bcm.edu	36	3	52480964	52480964	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NISCH	11188	hgsc.bcm.edu	36	3	52497537	52497537	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STAB1	23166	hgsc.bcm.edu	36	3	52531280	52531280	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PBRM1	55193	hgsc.bcm.edu	36	3	52557278	52557278	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PRKCD	5580	hgsc.bcm.edu	36	3	53190508	53190508	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WNT5A	7474	hgsc.bcm.edu	36	3	55488629	55488629	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C3orf64	285203	hgsc.bcm.edu	36	3	69136264	69136264	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CADM2	253559	hgsc.bcm.edu	36	3	85858344	85858344	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EPHA3	2042	hgsc.bcm.edu	36	3	89341799	89341799	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR5H14	403273	hgsc.bcm.edu	36	3	99351761	99351761	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABI3BP	25890	hgsc.bcm.edu	36	3	102127867	102127867	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IFT57	55081	hgsc.bcm.edu	36	3	109393102	109393102	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMEM39A	55254	hgsc.bcm.edu	36	3	120638436	120638436	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
POLQ	51426	hgsc.bcm.edu	36	3	122683312	122683312	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GOLGB1	2804	hgsc.bcm.edu	36	3	122866139	122866139	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CASR	846	hgsc.bcm.edu	36	3	123486177	123486177	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR5B	54554	hgsc.bcm.edu	36	3	123616085	123616085	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PARP14	54625	hgsc.bcm.edu	36	3	123905422	123905422	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ADCY5	111	hgsc.bcm.edu	36	3	124649050	124649050	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UROC1	131669	hgsc.bcm.edu	36	3	127707507	127707507	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EPHB1	2047	hgsc.bcm.edu	36	3	136403122	136403122	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PPP2R3A	5523	hgsc.bcm.edu	36	3	137303555	137303555	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
P2RY1	5028	hgsc.bcm.edu	36	3	154036806	154036806	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SAMD7	344658	hgsc.bcm.edu	36	3	171121809	171121809	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PIK3CA	5290	hgsc.bcm.edu	36	3	180399570	180399570	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PIK3CA	5290	hgsc.bcm.edu	36	3	180399630	180399630	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KLHL6	89857	hgsc.bcm.edu	36	3	184700225	184700225	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PARL	55486	hgsc.bcm.edu	36	3	185063247	185063247	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
VWA5B2	90113	hgsc.bcm.edu	36	3	185437016	185437016	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TP63	8626	hgsc.bcm.edu	36	3	191008951	191008951	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLDN16	10686	hgsc.bcm.edu	36	3	191608918	191608918	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PPP1R2	5504	hgsc.bcm.edu	36	3	196737949	196737949	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
APOD	347	hgsc.bcm.edu	36	3	196777260	196777260	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CCDC77	84318	hgsc.bcm.edu	36	12	391278	391278	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CACNA1C	775	hgsc.bcm.edu	36	12	2659109	2659109	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TULP3	7289	hgsc.bcm.edu	36	12	2917675	2917675	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FGF23	8074	hgsc.bcm.edu	36	12	4349999	4349999	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANO2	57101	hgsc.bcm.edu	36	12	5545058	5545058	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NCAPD2	9918	hgsc.bcm.edu	36	12	6502393	6502393	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GRIN2B	2904	hgsc.bcm.edu	36	12	13607626	13607626	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EPS8	2059	hgsc.bcm.edu	36	12	15695158	15695158	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
REP15	387849	hgsc.bcm.edu	36	12	27740972	27740972	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KLHDC5	57542	hgsc.bcm.edu	36	12	27825049	27825049	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALG10B	144245	hgsc.bcm.edu	36	12	37000691	37000691	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIF21A	55605	hgsc.bcm.edu	36	12	38047974	38047974	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABCD2	225	hgsc.bcm.edu	36	12	38283996	38283996	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRRK2	120892	hgsc.bcm.edu	36	12	38994117	38994117	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRRK2	120892	hgsc.bcm.edu	36	12	39002106	39002106	+	Nonsense_Mutation	SNP	C	C	T	rs11564176	byHapMap	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANO6	196527	hgsc.bcm.edu	36	12	44028245	44028245	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAPGEF3	10411	hgsc.bcm.edu	36	12	46438036	46438036	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM186A	121006	hgsc.bcm.edu	36	12	49040837	49040837	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TFCP2	7024	hgsc.bcm.edu	36	12	49789225	49789225	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ACVRL1	94	hgsc.bcm.edu	36	12	50593227	50593227	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KRT83	3889	hgsc.bcm.edu	36	12	50996612	50996612	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KRT5	3852	hgsc.bcm.edu	36	12	51197268	51197268	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ERBB3	2065	hgsc.bcm.edu	36	12	54780233	54780233	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CNPY2	10330	hgsc.bcm.edu	36	12	54995183	54995183	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STAT2	6773	hgsc.bcm.edu	36	12	55031428	55031428	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
INHBE	83729	hgsc.bcm.edu	36	12	56136605	56136605	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OS9	10956	hgsc.bcm.edu	36	12	56395863	56395863	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AVPR1A	552	hgsc.bcm.edu	36	12	61830204	61830204	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TBK1	29110	hgsc.bcm.edu	36	12	63162022	63162022	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTPRR	5801	hgsc.bcm.edu	36	12	69364789	69364789	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GLIPR1L1	256710	hgsc.bcm.edu	36	12	74050154	74050154	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZDHHC17	23390	hgsc.bcm.edu	36	12	75723251	75723251	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
E2F7	144455	hgsc.bcm.edu	36	12	75943817	75943817	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYT1	6857	hgsc.bcm.edu	36	12	78203762	78203762	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PPFIA2	8499	hgsc.bcm.edu	36	12	80293784	80293784	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MGAT4C	25834	hgsc.bcm.edu	36	12	84897460	84897460	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C12orf12	196477	hgsc.bcm.edu	36	12	89871947	89871947	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FGD6	55785	hgsc.bcm.edu	36	12	94002492	94002492	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IKBIP	0	hgsc.bcm.edu	36	12	97531617	97531617	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANKS1B	56899	hgsc.bcm.edu	36	12	97718974	97718974	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UBE3B	89910	hgsc.bcm.edu	36	12	108456952	108456952	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TRPV4	59341	hgsc.bcm.edu	36	12	108705840	108705840	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC24A6	80024	hgsc.bcm.edu	36	12	112243502	112243502	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RBM19	9904	hgsc.bcm.edu	36	12	112868066	112868066	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GCN1L1	10985	hgsc.bcm.edu	36	12	119066589	119066589	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BCL7A	605	hgsc.bcm.edu	36	12	120957679	120957679	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SETD8	387893	hgsc.bcm.edu	36	12	122445579	122445579	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNAH10	196385	hgsc.bcm.edu	36	12	122899357	122899357	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NOC4L	79050	hgsc.bcm.edu	36	12	131198208	131198208	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF140	7699	hgsc.bcm.edu	36	12	132192952	132192952	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MKRN3	7681	hgsc.bcm.edu	36	15	21362291	21362291	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SNRPN	6638	hgsc.bcm.edu	36	15	22774111	22774111	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HERC2	8924	hgsc.bcm.edu	36	15	26071513	26071513	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TJP1	7082	hgsc.bcm.edu	36	15	27813870	27813870	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OTUD7A	161725	hgsc.bcm.edu	36	15	29563821	29563821	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OTUD7A	161725	hgsc.bcm.edu	36	15	29583293	29583293	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC12A6	9990	hgsc.bcm.edu	36	15	32313427	32313427	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TGM7	116179	hgsc.bcm.edu	36	15	41358696	41358696	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STRC	161497	hgsc.bcm.edu	36	15	41680114	41680114	+	Missense_Mutation	SNP	C	C	A	rs2915791	byHapMap	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STRC	161497	hgsc.bcm.edu	36	15	41680139	41680139	+	Silent	SNP	G	G	C	rs12438025	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FRMD5	84978	hgsc.bcm.edu	36	15	41965184	41965184	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC24A5	283652	hgsc.bcm.edu	36	15	46221547	46221547	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FBN1	2200	hgsc.bcm.edu	36	15	46501141	46501141	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FBN1	2200	hgsc.bcm.edu	36	15	46617228	46617228	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALDH1A2	8854	hgsc.bcm.edu	36	15	56093391	56093391	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLPX	10845	hgsc.bcm.edu	36	15	63232973	63232973	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CILP	8483	hgsc.bcm.edu	36	15	63278335	63278335	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DPP8	54878	hgsc.bcm.edu	36	15	63580098	63580098	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FEM1B	10116	hgsc.bcm.edu	36	15	66369412	66369412	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UACA	55075	hgsc.bcm.edu	36	15	68747020	68747020	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LARP6	55323	hgsc.bcm.edu	36	15	68911525	68911525	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYO9A	4649	hgsc.bcm.edu	36	15	69930693	69930693	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HCN4	10021	hgsc.bcm.edu	36	15	71409083	71409083	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STOML1	9399	hgsc.bcm.edu	36	15	72069747	72069747	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CYP11A1	1583	hgsc.bcm.edu	36	15	72424625	72424625	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SIN3A	25942	hgsc.bcm.edu	36	15	73455231	73455231	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SCAPER	49855	hgsc.bcm.edu	36	15	74812671	74812671	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR61	80349	hgsc.bcm.edu	36	15	76367743	76367743	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1024	23251	hgsc.bcm.edu	36	15	77547764	77547764	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMC3	342125	hgsc.bcm.edu	36	15	79412218	79412218	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM154B	283726	hgsc.bcm.edu	36	15	80362170	80362170	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALPK3	57538	hgsc.bcm.edu	36	15	83201615	83201615	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DET1	55070	hgsc.bcm.edu	36	15	86875574	86875574	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CHD2	1106	hgsc.bcm.edu	36	15	91364308	91364308	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MCTP2	55784	hgsc.bcm.edu	36	15	92700382	92700382	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SPATA8	221409	hgsc.bcm.edu	36	15	95129240	95129240	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRRK1	79705	hgsc.bcm.edu	36	15	99380188	99380188	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TARSL2	123283	hgsc.bcm.edu	36	15	100066597	100066597	+	Silent	SNP	T	T	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARSD	414	hgsc.bcm.edu	36	X	2850000	2850000	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARSF	416	hgsc.bcm.edu	36	X	3012661	3012661	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TLR7	51284	hgsc.bcm.edu	36	X	12814203	12814203	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TRAPPC2	6399	hgsc.bcm.edu	36	X	13644716	13644716	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYAP1	94056	hgsc.bcm.edu	36	X	16671763	16671763	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BEND2	139105	hgsc.bcm.edu	36	X	18144654	18144654	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IL1RAPL1	11141	hgsc.bcm.edu	36	X	29882676	29882676	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM47B	170062	hgsc.bcm.edu	36	X	34871375	34871375	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MAGEB16	139604	hgsc.bcm.edu	36	X	35731060	35731060	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OTC	5009	hgsc.bcm.edu	36	X	38114051	38114051	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
USP9X	8239	hgsc.bcm.edu	36	X	40961522	40961522	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CASK	8573	hgsc.bcm.edu	36	X	41331176	41331176	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TBC1D25	4943	hgsc.bcm.edu	36	X	48303353	48303353	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HDAC6	10013	hgsc.bcm.edu	36	X	48559284	48559284	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TIMM17B	10245	hgsc.bcm.edu	36	X	48636327	48636327	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PRICKLE3	4007	hgsc.bcm.edu	36	X	48919396	48919396	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CACNA1F	778	hgsc.bcm.edu	36	X	48956151	48956151	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HUWE1	10075	hgsc.bcm.edu	36	X	53633279	53633279	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PAGE2	203569	hgsc.bcm.edu	36	X	55133757	55133757	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HEPH	9843	hgsc.bcm.edu	36	X	65392728	65392728	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RPS4X	6191	hgsc.bcm.edu	36	X	71412282	71412282	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA2022	340533	hgsc.bcm.edu	36	X	73876792	73876792	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UPRT	139596	hgsc.bcm.edu	36	X	74436424	74436424	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MAGEE2	139599	hgsc.bcm.edu	36	X	74920253	74920253	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ATRX	546	hgsc.bcm.edu	36	X	76824683	76824683	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BRWD3	254065	hgsc.bcm.edu	36	X	79875623	79875623	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TGIF2LX	90316	hgsc.bcm.edu	36	X	89064293	89064293	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GLA	9027	hgsc.bcm.edu	36	X	100545515	100545515	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TCEAL5	340543	hgsc.bcm.edu	36	X	102415777	102415777	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM199X	0	hgsc.bcm.edu	36	X	103298291	103298291	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
COL4A6	1288	hgsc.bcm.edu	36	X	107318431	107318431	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CXorf56	63932	hgsc.bcm.edu	36	X	118562470	118562470	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RHOXF1	158800	hgsc.bcm.edu	36	X	119133478	119133478	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ODZ1	10178	hgsc.bcm.edu	36	X	123458576	123458576	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPR119	139760	hgsc.bcm.edu	36	X	129346189	129346189	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IGSF1	3547	hgsc.bcm.edu	36	X	130242889	130242889	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DDX26B	203522	hgsc.bcm.edu	36	X	134534424	134534424	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZIC3	7547	hgsc.bcm.edu	36	X	136477426	136477426	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AFF2	2334	hgsc.bcm.edu	36	X	147726896	147726896	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GABRQ	55879	hgsc.bcm.edu	36	X	151571967	151571967	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MAGEA1	4100	hgsc.bcm.edu	36	X	152135677	152135677	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ATP2B3	492	hgsc.bcm.edu	36	X	152461696	152461696	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AVPR2	554	hgsc.bcm.edu	36	X	152824745	152824745	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HCFC1	3054	hgsc.bcm.edu	36	X	152882862	152882862	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TAZ	25937	hgsc.bcm.edu	36	X	153301755	153301755	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMEM175	84286	hgsc.bcm.edu	36	4	941877	941877	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC26A1	10861	hgsc.bcm.edu	36	4	973868	973868	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TACC3	10460	hgsc.bcm.edu	36	4	1695055	1695055	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FGFR3	2261	hgsc.bcm.edu	36	4	1778783	1778783	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RGS12	6002	hgsc.bcm.edu	36	4	3388991	3388991	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EVC2	132884	hgsc.bcm.edu	36	4	5718230	5718230	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CPZ	8532	hgsc.bcm.edu	36	4	8656656	8656656	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PPARGC1A	10891	hgsc.bcm.edu	36	4	23412955	23412955	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SEL1L3	0	hgsc.bcm.edu	36	4	25415366	25415366	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARAP2	116984	hgsc.bcm.edu	36	4	35795099	35795099	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
N4BP2	55728	hgsc.bcm.edu	36	4	39799493	39799493	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
APBB2	323	hgsc.bcm.edu	36	4	40710428	40710428	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TEC	100124696	hgsc.bcm.edu	36	4	47925323	47925323	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HTN3	3347	hgsc.bcm.edu	36	4	70931083	70931083	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GRSF1	2926	hgsc.bcm.edu	36	4	71909922	71909922	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NAA11	0	hgsc.bcm.edu	36	4	80465852	80465852	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SCD5	79966	hgsc.bcm.edu	36	4	83845532	83845532	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTPN13	5783	hgsc.bcm.edu	36	4	87950113	87950113	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UNC5C	8633	hgsc.bcm.edu	36	4	96356336	96356336	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PDHA2	5161	hgsc.bcm.edu	36	4	96980915	96980915	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
COL25A1	84570	hgsc.bcm.edu	36	4	109985803	109985803	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SYNPO2	171024	hgsc.bcm.edu	36	4	120170706	120170706	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1109	84162	hgsc.bcm.edu	36	4	123457412	123457412	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TBC1D9	23158	hgsc.bcm.edu	36	4	141817507	141817507	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF330	27309	hgsc.bcm.edu	36	4	142365212	142365212	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
USP38	84640	hgsc.bcm.edu	36	4	144326456	144326456	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FHDC1	85462	hgsc.bcm.edu	36	4	154116984	154116984	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GUCY1B3	2983	hgsc.bcm.edu	36	4	156940549	156940549	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ACCN5	51802	hgsc.bcm.edu	36	4	157004086	157004086	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DDX60L	91351	hgsc.bcm.edu	36	4	169552280	169552280	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AADAT	51166	hgsc.bcm.edu	36	4	171225091	171225091	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPM6A	2823	hgsc.bcm.edu	36	4	176793127	176793127	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPM6A	2823	hgsc.bcm.edu	36	4	176793139	176793139	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ODZ3	55714	hgsc.bcm.edu	36	4	183840161	183840161	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IRF2	3660	hgsc.bcm.edu	36	4	185546965	185546965	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PXDN	7837	hgsc.bcm.edu	36	2	1631490	1631490	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTC15	51112	hgsc.bcm.edu	36	2	3371397	3371397	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GRHL1	29841	hgsc.bcm.edu	36	2	10049692	10049692	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GREB1	9687	hgsc.bcm.edu	36	2	11668322	11668322	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GREB1	9687	hgsc.bcm.edu	36	2	11668513	11668513	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SMC6	79677	hgsc.bcm.edu	36	2	17761541	17761541	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SDC1	6382	hgsc.bcm.edu	36	2	20266404	20266404	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PUM2	23369	hgsc.bcm.edu	36	2	20314933	20314933	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EFR3B	22979	hgsc.bcm.edu	36	2	25213783	25213783	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DTNB	1838	hgsc.bcm.edu	36	2	25531797	25531797	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ASXL2	55252	hgsc.bcm.edu	36	2	25818553	25818553	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM59B	150946	hgsc.bcm.edu	36	2	26262648	26262648	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPR113	165082	hgsc.bcm.edu	36	2	26387286	26387286	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPR113	165082	hgsc.bcm.edu	36	2	26387832	26387832	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OTOF	9381	hgsc.bcm.edu	36	2	26540342	26540342	+	Silent	SNP	G	G	A	rs12386239	byFrequency;byHapMap	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OTOF	9381	hgsc.bcm.edu	36	2	26553550	26553550	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PPP1CB	5500	hgsc.bcm.edu	36	2	28855312	28855312	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALK	238	hgsc.bcm.edu	36	2	29299734	29299734	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALK	238	hgsc.bcm.edu	36	2	29299889	29299889	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BIRC6	57448	hgsc.bcm.edu	36	2	32653931	32653931	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LTBP1	4052	hgsc.bcm.edu	36	2	33336050	33336050	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRPPRC	10128	hgsc.bcm.edu	36	2	44060486	44060486	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PREPL	9581	hgsc.bcm.edu	36	2	44419004	44419004	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MSH2	4436	hgsc.bcm.edu	36	2	47561342	47561342	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FBXO11	80204	hgsc.bcm.edu	36	2	47899433	47899433	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPR75	10936	hgsc.bcm.edu	36	2	53933852	53933852	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPR75	10936	hgsc.bcm.edu	36	2	53934494	53934494	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SPTBN1	6711	hgsc.bcm.edu	36	2	54740638	54740638	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CCDC85A	114800	hgsc.bcm.edu	36	2	56453097	56453097	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM161A	84140	hgsc.bcm.edu	36	2	61921086	61921086	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ETAA1	54465	hgsc.bcm.edu	36	2	67484809	67484809	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANTXR1	84168	hgsc.bcm.edu	36	2	69325941	69325941	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C2orf42	54980	hgsc.bcm.edu	36	2	70246185	70246185	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
REG1A	5967	hgsc.bcm.edu	36	2	79203550	79203550	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNAH6	1768	hgsc.bcm.edu	36	2	84630574	84630574	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
POLR1A	25885	hgsc.bcm.edu	36	2	86180669	86180669	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CD8B	926	hgsc.bcm.edu	36	2	86927380	86927380	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EIF2AK3	9451	hgsc.bcm.edu	36	2	88657326	88657326	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
INPP4A	3631	hgsc.bcm.edu	36	2	98522453	98522453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MAP4K4	9448	hgsc.bcm.edu	36	2	101852525	101852525	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IL1R1	3554	hgsc.bcm.edu	36	2	102159569	102159569	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANAPC1	64682	hgsc.bcm.edu	36	2	112317641	112317641	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FBLN7	129804	hgsc.bcm.edu	36	2	112661513	112661513	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZC3H6	376940	hgsc.bcm.edu	36	2	112774064	112774064	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FOXD4L1	200350	hgsc.bcm.edu	36	2	113973312	113973312	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC35F5	80255	hgsc.bcm.edu	36	2	114229234	114229234	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SCTR	6344	hgsc.bcm.edu	36	2	119968555	119968555	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYO7B	4648	hgsc.bcm.edu	36	2	128099575	128099575	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR33	55339	hgsc.bcm.edu	36	2	128182804	128182804	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UGGT1	0	hgsc.bcm.edu	36	2	128656314	128656314	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IMP4	92856	hgsc.bcm.edu	36	2	130819963	130819963	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MGAT5	4249	hgsc.bcm.edu	36	2	134728479	134728479	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LCT	3938	hgsc.bcm.edu	36	2	136282784	136282784	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NEB	4703	hgsc.bcm.edu	36	2	152105545	152105545	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NEB	4703	hgsc.bcm.edu	36	2	152118656	152118656	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NEB	4703	hgsc.bcm.edu	36	2	152190323	152190323	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NEB	4703	hgsc.bcm.edu	36	2	152231040	152231040	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STAM2	10254	hgsc.bcm.edu	36	2	152711998	152711998	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC4A10	57282	hgsc.bcm.edu	36	2	162469604	162469604	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC38A11	151258	hgsc.bcm.edu	36	2	165480675	165480675	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTC21B	79809	hgsc.bcm.edu	36	2	166463451	166463451	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTC21B	79809	hgsc.bcm.edu	36	2	166494488	166494488	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SCN9A	6335	hgsc.bcm.edu	36	2	166858001	166858001	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UBR3	130507	hgsc.bcm.edu	36	2	170523195	170523195	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAPGEF4	11069	hgsc.bcm.edu	36	2	173593632	173593632	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HOXD10	3236	hgsc.bcm.edu	36	2	176691931	176691931	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTN	7273	hgsc.bcm.edu	36	2	179144124	179144124	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTN	7273	hgsc.bcm.edu	36	2	179180090	179180090	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTN	7273	hgsc.bcm.edu	36	2	179186888	179186888	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTN	7273	hgsc.bcm.edu	36	2	179290702	179290702	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTN	7273	hgsc.bcm.edu	36	2	179302110	179302110	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTN	7273	hgsc.bcm.edu	36	2	179329429	179329429	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTN	7273	hgsc.bcm.edu	36	2	179343144	179343144	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
COL3A1	1281	hgsc.bcm.edu	36	2	189569420	189569420	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STAT1	6772	hgsc.bcm.edu	36	2	191571219	191571219	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALS2	57679	hgsc.bcm.edu	36	2	202300735	202300735	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FZD7	8324	hgsc.bcm.edu	36	2	202608552	202608552	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAPH1	65059	hgsc.bcm.edu	36	2	204034235	204034235	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PIKFYVE	200576	hgsc.bcm.edu	36	2	208906386	208906386	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UNC80	285175	hgsc.bcm.edu	36	2	210350449	210350449	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CYP27A1	1593	hgsc.bcm.edu	36	2	219385336	219385336	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ATG9A	79065	hgsc.bcm.edu	36	2	219799836	219799836	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
INHA	3623	hgsc.bcm.edu	36	2	220145466	220145466	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC4A3	6508	hgsc.bcm.edu	36	2	220202620	220202620	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC4A3	6508	hgsc.bcm.edu	36	2	220211719	220211719	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CUL3	8452	hgsc.bcm.edu	36	2	225087654	225087654	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1486	57624	hgsc.bcm.edu	36	2	226155847	226155847	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CHRNG	1146	hgsc.bcm.edu	36	2	233114382	233114382	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HDAC4	9759	hgsc.bcm.edu	36	2	239776493	239776493	+	Silent	SNP	G	G	A	rs6740794	by2Hit2Allele;byCluster;byFrequency	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PASK	27347	hgsc.bcm.edu	36	2	241714877	241714877	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
THAP4	51078	hgsc.bcm.edu	36	2	242221473	242221473	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RANBP6	26953	hgsc.bcm.edu	36	9	6004214	6004214	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTPRD	5789	hgsc.bcm.edu	36	9	8508381	8508381	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FREM1	158326	hgsc.bcm.edu	36	9	14791752	14791752	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C9orf93	203238	hgsc.bcm.edu	36	9	15656165	15656165	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ELAVL2	1993	hgsc.bcm.edu	36	9	23682637	23682637	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PLAA	9373	hgsc.bcm.edu	36	9	26916410	26916410	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C9orf100	84904	hgsc.bcm.edu	36	9	35654083	35654083	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C9orf128	392307	hgsc.bcm.edu	36	9	35808888	35808888	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
VPS13A	23230	hgsc.bcm.edu	36	9	79084959	79084959	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NAA35	0	hgsc.bcm.edu	36	9	87822236	87822236	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C9orf89	84270	hgsc.bcm.edu	36	9	94912695	94912695	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WNK2	65268	hgsc.bcm.edu	36	9	95055034	95055034	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTCH1	5727	hgsc.bcm.edu	36	9	97271031	97271031	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANKS6	203286	hgsc.bcm.edu	36	9	100538723	100538723	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RNF20	56254	hgsc.bcm.edu	36	9	103342937	103342937	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR13C8	138802	hgsc.bcm.edu	36	9	106372164	106372164	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NIPSNAP3B	55335	hgsc.bcm.edu	36	9	106575102	106575102	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF462	58499	hgsc.bcm.edu	36	9	108731670	108731670	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTPN3	5774	hgsc.bcm.edu	36	9	111222700	111222700	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1958	158405	hgsc.bcm.edu	36	9	114462015	114462015	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SNX30	401548	hgsc.bcm.edu	36	9	114632827	114632827	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RGS3	5998	hgsc.bcm.edu	36	9	115303717	115303717	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TNC	7134	hgsc.bcm.edu	36	9	116878166	116878166	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ASTN2	23245	hgsc.bcm.edu	36	9	118527998	118527998	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR1J1	347168	hgsc.bcm.edu	36	9	124279960	124279960	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RC3H2	54542	hgsc.bcm.edu	36	9	124662099	124662099	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OLFML2A	169611	hgsc.bcm.edu	36	9	126601432	126601432	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TTC16	158248	hgsc.bcm.edu	36	9	129533035	129533035	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FPGS	2356	hgsc.bcm.edu	36	9	129615493	129615493	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ST6GALNAC4	27090	hgsc.bcm.edu	36	9	129714661	129714661	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CIZ1	25792	hgsc.bcm.edu	36	9	129987679	129987679	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PHYHD1	254295	hgsc.bcm.edu	36	9	130735887	130735887	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
POMT1	10585	hgsc.bcm.edu	36	9	133383734	133383734	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RAPGEF1	2889	hgsc.bcm.edu	36	9	133467280	133467280	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SETX	23064	hgsc.bcm.edu	36	9	134195062	134195062	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TSC1	7248	hgsc.bcm.edu	36	9	134770810	134770810	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
QSOX2	169714	hgsc.bcm.edu	36	9	138240601	138240601	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NOTCH1	4851	hgsc.bcm.edu	36	9	138516301	138516301	+	Silent	SNP	G	G	A	rs61751535	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AGPAT2	10555	hgsc.bcm.edu	36	9	138690918	138690918	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LCN15	389812	hgsc.bcm.edu	36	9	138777987	138777987	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MAMDC4	158056	hgsc.bcm.edu	36	9	138873115	138873115	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ENTPD2	954	hgsc.bcm.edu	36	9	139065586	139065586	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EXD3	54932	hgsc.bcm.edu	36	9	139363678	139363678	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CACNA1B	774	hgsc.bcm.edu	36	9	140039438	140039438	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SPATA13	221178	hgsc.bcm.edu	36	13	23774792	23774792	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ATP8A2	51761	hgsc.bcm.edu	36	13	25015531	25015531	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ATP8A2	51761	hgsc.bcm.edu	36	13	25241298	25241298	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
POMP	51371	hgsc.bcm.edu	36	13	28150185	28150185	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NBEA	26960	hgsc.bcm.edu	36	13	34632141	34632141	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SPG20	23111	hgsc.bcm.edu	36	13	35784585	35784585	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CCNA1	8900	hgsc.bcm.edu	36	13	35912297	35912297	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALG5	29880	hgsc.bcm.edu	36	13	36437738	36437738	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FREM2	341640	hgsc.bcm.edu	36	13	38164012	38164012	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FREM2	341640	hgsc.bcm.edu	36	13	38164024	38164024	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STOML3	161003	hgsc.bcm.edu	36	13	38444689	38444689	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
COG6	57511	hgsc.bcm.edu	36	13	39223217	39223217	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SUCLA2	8803	hgsc.bcm.edu	36	13	47421700	47421700	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RB1	5925	hgsc.bcm.edu	36	13	47779523	47779523	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RCBTB2	1102	hgsc.bcm.edu	36	13	47974886	47974886	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ATP7B	540	hgsc.bcm.edu	36	13	51411271	51411271	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLAIN1	122060	hgsc.bcm.edu	36	13	77225372	77225372	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RNF219	79596	hgsc.bcm.edu	36	13	78107254	78107254	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RBM26	64062	hgsc.bcm.edu	36	13	78840957	78840957	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STK24	8428	hgsc.bcm.edu	36	13	97925548	97925548	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LIG4	3981	hgsc.bcm.edu	36	13	107659527	107659527	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYO16	23026	hgsc.bcm.edu	36	13	108577716	108577716	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYO16	23026	hgsc.bcm.edu	36	13	108577751	108577751	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AKR1E2	0	hgsc.bcm.edu	36	10	4869759	4869759	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ASB13	79754	hgsc.bcm.edu	36	10	5734892	5734892	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RBM17	84991	hgsc.bcm.edu	36	10	6186953	6186953	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ITIH5	80760	hgsc.bcm.edu	36	10	7661981	7661981	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARHGAP21	57584	hgsc.bcm.edu	36	10	24920901	24920901	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANKRD26	22852	hgsc.bcm.edu	36	10	27364653	27364653	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SVIL	6840	hgsc.bcm.edu	36	10	29879786	29879786	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NRP1	8829	hgsc.bcm.edu	36	10	33550666	33550666	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NRP1	8829	hgsc.bcm.edu	36	10	33599768	33599768	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANUBL1	93550	hgsc.bcm.edu	36	10	45442021	45442021	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARHGAP22	58504	hgsc.bcm.edu	36	10	49461179	49461179	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDFY4	57705	hgsc.bcm.edu	36	10	49609584	49609584	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C10orf71	118461	hgsc.bcm.edu	36	10	50203537	50203537	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDH15	65217	hgsc.bcm.edu	36	10	55296416	55296416	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EGR2	1959	hgsc.bcm.edu	36	10	64243844	64243844	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRRTM3	347731	hgsc.bcm.edu	36	10	68357530	68357530	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CCAR1	55749	hgsc.bcm.edu	36	10	70195694	70195694	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TACR2	6865	hgsc.bcm.edu	36	10	70844869	70844869	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PPP3CB	5532	hgsc.bcm.edu	36	10	74868033	74868033	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA0913	23053	hgsc.bcm.edu	36	10	75222404	75222404	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
POLR3A	11128	hgsc.bcm.edu	36	10	79439422	79439422	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BMPR1A	657	hgsc.bcm.edu	36	10	88673415	88673415	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MINPP1	9562	hgsc.bcm.edu	36	10	89302048	89302048	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTEN	5728	hgsc.bcm.edu	36	10	89707676	89707676	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTEN	5728	hgsc.bcm.edu	36	10	89707743	89707743	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTEN	5728	hgsc.bcm.edu	36	10	89710798	89710798	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTEN	5728	hgsc.bcm.edu	36	10	89715052	89715052	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IFIT3	3437	hgsc.bcm.edu	36	10	91088857	91088857	+	Silent	SNP	G	G	A	rs34847428	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PLCE1	51196	hgsc.bcm.edu	36	10	96023379	96023379	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HELLS	3070	hgsc.bcm.edu	36	10	96326545	96326545	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RRP12	23223	hgsc.bcm.edu	36	10	99106891	99106891	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PYROXD2	84795	hgsc.bcm.edu	36	10	100136963	100136963	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C10orf2	57132	hgsc.bcm.edu	36	10	102738351	102738351	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LZTS2	84445	hgsc.bcm.edu	36	10	102756329	102756329	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LZTS2	84445	hgsc.bcm.edu	36	10	102756459	102756459	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RBM20	282996	hgsc.bcm.edu	36	10	112534116	112534116	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ADRA2A	150	hgsc.bcm.edu	36	10	112827961	112827961	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPAM	57678	hgsc.bcm.edu	36	10	113925457	113925457	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NRAP	65083	hgsc.bcm.edu	36	10	115401610	115401610	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR11	55717	hgsc.bcm.edu	36	10	122630345	122630345	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FGFR2	2263	hgsc.bcm.edu	36	10	123300938	123300938	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TACC2	10579	hgsc.bcm.edu	36	10	123835801	123835801	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CUZD1	50624	hgsc.bcm.edu	36	10	124583227	124583227	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C10orf137	26098	hgsc.bcm.edu	36	10	127414334	127414334	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DOCK1	1793	hgsc.bcm.edu	36	10	129106747	129106747	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MKI67	4288	hgsc.bcm.edu	36	10	129791227	129791227	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRRC27	80313	hgsc.bcm.edu	36	10	134028961	134028961	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ECHS1	1892	hgsc.bcm.edu	36	10	135034154	135034154	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PLEKHG4B	153478	hgsc.bcm.edu	36	5	227143	227143	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ADAMTS16	170690	hgsc.bcm.edu	36	5	5235328	5235328	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TRIO	7204	hgsc.bcm.edu	36	5	14350300	14350300	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NIPBL	25836	hgsc.bcm.edu	36	5	37021621	37021621	+	Nonsense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EGFLAM	133584	hgsc.bcm.edu	36	5	38474277	38474277	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTGER4	5734	hgsc.bcm.edu	36	5	40716885	40716885	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PRKAA1	5562	hgsc.bcm.edu	36	5	40800763	40800763	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SNX18	112574	hgsc.bcm.edu	36	5	53850656	53850656	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CDC20B	166979	hgsc.bcm.edu	36	5	54452072	54452072	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZSWIM6	57688	hgsc.bcm.edu	36	5	60867112	60867112	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IPO11	51194	hgsc.bcm.edu	36	5	61781542	61781542	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CD180	4064	hgsc.bcm.edu	36	5	66514953	66514953	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMEM171	134285	hgsc.bcm.edu	36	5	72460072	72460072	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARSB	411	hgsc.bcm.edu	36	5	78112095	78112095	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
THBS4	7060	hgsc.bcm.edu	36	5	79403882	79403882	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RGMB	285704	hgsc.bcm.edu	36	5	98156859	98156859	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CHD1	1105	hgsc.bcm.edu	36	5	98267499	98267499	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PAM	23077	hgsc.bcm.edu	36	5	102391809	102391809	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
APC	324	hgsc.bcm.edu	36	5	112201184	112201184	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FEM1C	56929	hgsc.bcm.edu	36	5	114906775	114906775	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HSD17B4	3295	hgsc.bcm.edu	36	5	118863135	118863135	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HSD17B4	3295	hgsc.bcm.edu	36	5	118872819	118872819	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SNX2	6643	hgsc.bcm.edu	36	5	122182535	122182535	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LMNB1	4001	hgsc.bcm.edu	36	5	126168438	126168438	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
P4HA2	8974	hgsc.bcm.edu	36	5	131561958	131561958	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PHF15	23338	hgsc.bcm.edu	36	5	133930129	133930129	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIF20A	10112	hgsc.bcm.edu	36	5	137545934	137545934	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GFRA3	2676	hgsc.bcm.edu	36	5	137621428	137621428	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANKHD1	54882	hgsc.bcm.edu	36	5	139864667	139864667	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDHA2	56146	hgsc.bcm.edu	36	5	140156849	140156849	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDHA6	56142	hgsc.bcm.edu	36	5	140189396	140189396	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDHA11	56138	hgsc.bcm.edu	36	5	140230585	140230585	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDHB2	56133	hgsc.bcm.edu	36	5	140455170	140455170	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDHB2	56133	hgsc.bcm.edu	36	5	140456087	140456087	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDHB14	56122	hgsc.bcm.edu	36	5	140585438	140585438	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDHGA1	56114	hgsc.bcm.edu	36	5	140692116	140692116	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDHGB2	56103	hgsc.bcm.edu	36	5	140721111	140721111	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDHGA5	56110	hgsc.bcm.edu	36	5	140724342	140724342	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDHGA7	56108	hgsc.bcm.edu	36	5	140744088	140744088	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARAP3	64411	hgsc.bcm.edu	36	5	141014054	141014054	+	Missense_Mutation	SNP	T	T	G	rs61749636	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARAP3	64411	hgsc.bcm.edu	36	5	141019600	141019600	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCDH1	5097	hgsc.bcm.edu	36	5	141214004	141214004	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NDFIP1	80762	hgsc.bcm.edu	36	5	141495498	141495498	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPR151	134391	hgsc.bcm.edu	36	5	145875145	145875145	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABLIM3	22885	hgsc.bcm.edu	36	5	148558096	148558096	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANXA6	309	hgsc.bcm.edu	36	5	150492239	150492239	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GM2A	2760	hgsc.bcm.edu	36	5	150627139	150627139	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NMUR2	56923	hgsc.bcm.edu	36	5	151755302	151755302	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GALNT10	55568	hgsc.bcm.edu	36	5	153657728	153657728	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RNF145	153830	hgsc.bcm.edu	36	5	158520863	158520863	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GABRG2	2566	hgsc.bcm.edu	36	5	161455135	161455135	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1191	57179	hgsc.bcm.edu	36	5	175707244	175707244	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF879	0	hgsc.bcm.edu	36	5	178392879	178392879	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TBC1D9B	23061	hgsc.bcm.edu	36	5	179223555	179223555	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TBC1D9B	23061	hgsc.bcm.edu	36	5	179251033	179251033	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MGAT1	116255	hgsc.bcm.edu	36	5	180151795	180151795	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TRIM7	81786	hgsc.bcm.edu	36	5	180554847	180554847	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MNAT1	4331	hgsc.bcm.edu	36	14	60344901	60344901	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EML5	161436	hgsc.bcm.edu	36	14	88248367	88248367	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SFTPC	6440	hgsc.bcm.edu	36	8	22076191	22076191	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UBR5	51366	hgsc.bcm.edu	36	8	103376607	103376607	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RPE65	6121	hgsc.bcm.edu	36	1	68668200	68668200	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC17A5	26503	hgsc.bcm.edu	36	6	74376843	74376843	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AXIN1	8312	hgsc.bcm.edu	36	16	299973	299973	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DDX51	317781	hgsc.bcm.edu	36	12	131190269	131190269	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EIF2AK4	440275	hgsc.bcm.edu	36	15	38028763	38028763	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FIGF	2277	hgsc.bcm.edu	36	X	15274303	15274303	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SSX1	6756	hgsc.bcm.edu	36	X	48010771	48010771	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ABCA12	26154	hgsc.bcm.edu	36	2	215577177	215577177	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NALCN	259232	hgsc.bcm.edu	36	13	100505843	100505843	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PDCD6	10016	hgsc.bcm.edu	36	5	359876	359876	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
APC	324	hgsc.bcm.edu	36	5	112139223	112139223	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KLHL21	9903	hgsc.bcm.edu	36	1	6576291	6576292	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PRAMEF5	343068	hgsc.bcm.edu	36	1	13031606	13031607	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TCEB3	6924	hgsc.bcm.edu	36	1	23950991	23950991	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMEM57	55219	hgsc.bcm.edu	36	1	25647962	25647962	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDTC1	23038	hgsc.bcm.edu	36	1	27493695	27493695	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MAP7D1	55700	hgsc.bcm.edu	36	1	36409351	36409351	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CCDC30	0	hgsc.bcm.edu	36	1	42774787	42774788	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
USP1	7398	hgsc.bcm.edu	36	1	62688860	62688860	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
JAK1	3716	hgsc.bcm.edu	36	1	65079585	65079585	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR63	126820	hgsc.bcm.edu	36	1	85310249	85310249	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CDC14A	8556	hgsc.bcm.edu	36	1	100662425	100662425	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR47	22911	hgsc.bcm.edu	36	1	109361664	109361664	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HIPK1	204851	hgsc.bcm.edu	36	1	114299765	114299766	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DENND4B	9909	hgsc.bcm.edu	36	1	152183453	152183453	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CREB3L4	148327	hgsc.bcm.edu	36	1	152212146	152212148	+	In_Frame_Del	DEL	GAA	GAA	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	GAA	GAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIRREL	55243	hgsc.bcm.edu	36	1	156324827	156324827	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
IGSF9	57549	hgsc.bcm.edu	36	1	158170656	158170656	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RGS1	5996	hgsc.bcm.edu	36	1	190811660	190811661	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PKP1	5317	hgsc.bcm.edu	36	1	199560222	199560223	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNAH14	127602	hgsc.bcm.edu	36	1	223277961	223277962	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	AA	AA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
XDH	7498	hgsc.bcm.edu	36	2	31426474	31426474	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRPPRC	10128	hgsc.bcm.edu	36	2	43998669	43998669	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MSH2	4436	hgsc.bcm.edu	36	2	47559140	47559141	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SMEK2	57223	hgsc.bcm.edu	36	2	55658973	55658973	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM161A	84140	hgsc.bcm.edu	36	2	61916687	61916688	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRRTM4	80059	hgsc.bcm.edu	36	2	77599097	77599097	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EDAR	10913	hgsc.bcm.edu	36	2	108906269	108906269	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ACVR2A	92	hgsc.bcm.edu	36	2	148400156	148400156	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZC3H15	55854	hgsc.bcm.edu	36	2	187059409	187059411	+	In_Frame_Del	DEL	AAG	AAG	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	AAG	AAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALS2CR11	151254	hgsc.bcm.edu	36	2	202060596	202060597	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NBEAL1	65065	hgsc.bcm.edu	36	2	203630303	203630303	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZDBF2	57683	hgsc.bcm.edu	36	2	206882673	206882673	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C2orf67	151050	hgsc.bcm.edu	36	2	210596072	210596072	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C2orf85	285093	hgsc.bcm.edu	36	2	242463047	242463048	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PLXNB1	5364	hgsc.bcm.edu	36	3	48440489	48440489	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MAPKAPK3	7867	hgsc.bcm.edu	36	3	50630084	50630084	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CCDC66	285331	hgsc.bcm.edu	36	3	56626522	56626522	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FLNB	2317	hgsc.bcm.edu	36	3	58064827	58064828	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ROBO2	6092	hgsc.bcm.edu	36	3	77739728	77739728	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TBC1D23	55773	hgsc.bcm.edu	36	3	101522425	101522426	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARHGEF26	0	hgsc.bcm.edu	36	3	155395132	155395133	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FETUB	26998	hgsc.bcm.edu	36	3	187845237	187845238	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MFSD7	84179	hgsc.bcm.edu	36	4	666591	666591	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SEL1L3	0	hgsc.bcm.edu	36	4	25458356	25458356	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RBPJ	3516	hgsc.bcm.edu	36	4	26026244	26026244	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UGDH	7358	hgsc.bcm.edu	36	4	39192147	39192148	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
REST	5978	hgsc.bcm.edu	36	4	57491507	57491507	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ENAM	10117	hgsc.bcm.edu	36	4	71722419	71722419	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANTXR2	118429	hgsc.bcm.edu	36	4	81125014	81125014	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARSJ	79642	hgsc.bcm.edu	36	4	115043386	115043387	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARSJ	79642	hgsc.bcm.edu	36	4	115044088	115044088	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NPY2R	4887	hgsc.bcm.edu	36	4	156355331	156355332	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FBXO8	26269	hgsc.bcm.edu	36	4	175395242	175395242	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WWC2	80014	hgsc.bcm.edu	36	4	184403570	184403570	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CDH10	1008	hgsc.bcm.edu	36	5	24523709	24523709	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CDH10	1008	hgsc.bcm.edu	36	5	24523739	24523739	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZFR	51663	hgsc.bcm.edu	36	5	32439918	32439918	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C9	1645	hgsc.bcm.edu	36	5	39347090	39347091	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SREK1IP1	0	hgsc.bcm.edu	36	5	64056054	64056054	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TNPO1	3842	hgsc.bcm.edu	36	5	72235301	72235301	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FCHO2	115548	hgsc.bcm.edu	36	5	72300085	72300085	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AP3B1	8546	hgsc.bcm.edu	36	5	77370663	77370663	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CETN3	1070	hgsc.bcm.edu	36	5	89737337	89737337	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TCERG1	10915	hgsc.bcm.edu	36	5	145863698	145863699	+	Frame_Shift_Del	DEL	GA	GA	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	GA	GA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TUBB2A	7280	hgsc.bcm.edu	36	6	3099850	3099850	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
HLA-F	3134	hgsc.bcm.edu	36	6	29802782	29802782	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RDBP	7936	hgsc.bcm.edu	36	6	32034185	32034185	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1009	22832	hgsc.bcm.edu	36	6	84952951	84952952	+	Frame_Shift_Del	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ASCC3	10973	hgsc.bcm.edu	36	6	101403056	101403057	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GRIK2	2901	hgsc.bcm.edu	36	6	102610124	102610125	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MICAL1	64780	hgsc.bcm.edu	36	6	109873695	109873697	+	In_Frame_Del	DEL	TCT	TCT	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	TCT	TCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TUBE1	51175	hgsc.bcm.edu	36	6	112503899	112503899	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MICALL2	79778	hgsc.bcm.edu	36	7	1453743	1453743	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SNX13	23161	hgsc.bcm.edu	36	7	17822352	17822352	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ANLN	54443	hgsc.bcm.edu	36	7	36405240	36405241	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ELN	2006	hgsc.bcm.edu	36	7	73098976	73098976	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
JHDM1D	80853	hgsc.bcm.edu	36	7	139437441	139437441	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BRAF	673	hgsc.bcm.edu	36	7	140129395	140129396	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
XRCC2	7516	hgsc.bcm.edu	36	7	151976702	151976702	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MCPH1	79648	hgsc.bcm.edu	36	8	6276507	6276507	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KCTD9	54793	hgsc.bcm.edu	36	8	25345995	25345995	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TEX15	56154	hgsc.bcm.edu	36	8	30820954	30820954	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RP1	10982	hgsc.bcm.edu	36	8	55696532	55696532	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SULF1	23213	hgsc.bcm.edu	36	8	70638877	70638878	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZFHX4	79776	hgsc.bcm.edu	36	8	77780101	77780102	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NBN	9048	hgsc.bcm.edu	36	8	91027655	91027656	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RECQL4	9401	hgsc.bcm.edu	36	8	145713288	145713288	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LINGO2	158038	hgsc.bcm.edu	36	9	27939067	27939067	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR1L3	26735	hgsc.bcm.edu	36	9	124477757	124477757	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RABGAP1	23637	hgsc.bcm.edu	36	9	124900862	124900863	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FUBP3	8939	hgsc.bcm.edu	36	9	132495897	132495897	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CAMSAP1	157922	hgsc.bcm.edu	36	9	137855620	137855621	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC34A3	142680	hgsc.bcm.edu	36	9	139250239	139250241	+	In_Frame_Del	DEL	CTT	CTT	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	CTT	CTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LARP4B	23185	hgsc.bcm.edu	36	10	880939	880939	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UPF2	26019	hgsc.bcm.edu	36	10	12117229	12117229	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FRMD4A	55691	hgsc.bcm.edu	36	10	13752489	13752489	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SVIL	6840	hgsc.bcm.edu	36	10	29800122	29800122	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C10orf68	79741	hgsc.bcm.edu	36	10	33058283	33058283	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPRIN2	9721	hgsc.bcm.edu	36	10	46419597	46419598	+	In_Frame_Ins	INS	-	-	ATGAGGGAG	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM170B	170370	hgsc.bcm.edu	36	10	50009805	50009805	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF365	22891	hgsc.bcm.edu	36	10	63829519	63829519	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM35A	54537	hgsc.bcm.edu	36	10	88901249	88901249	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTEN	5728	hgsc.bcm.edu	36	10	89707750	89707750	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PTEN	5728	hgsc.bcm.edu	36	10	89710791	89710792	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STAMBPL1	57559	hgsc.bcm.edu	36	10	90672126	90672126	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYOF	26509	hgsc.bcm.edu	36	10	95079532	95079532	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C10orf82	143379	hgsc.bcm.edu	36	10	118415118	118415118	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C10orf120	399814	hgsc.bcm.edu	36	10	124447630	124447630	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM24B	196792	hgsc.bcm.edu	36	10	124598910	124598910	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM175B	23172	hgsc.bcm.edu	36	10	126507958	126507959	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMEM41B	440026	hgsc.bcm.edu	36	11	9261568	9261568	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C11orf41	25758	hgsc.bcm.edu	36	11	33584893	33584894	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR4C12	283093	hgsc.bcm.edu	36	11	49959704	49959705	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TRIM77	390231	hgsc.bcm.edu	36	11	89084259	89084259	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MFRP	83552	hgsc.bcm.edu	36	11	118718898	118718898	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AAAS	8086	hgsc.bcm.edu	36	12	51989691	51989691	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CBX5	23468	hgsc.bcm.edu	36	12	52932099	52932099	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR6C75	390323	hgsc.bcm.edu	36	12	54045753	54045753	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR6C76	390326	hgsc.bcm.edu	36	12	54107226	54107227	+	Frame_Shift_Del	DEL	AA	AA	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	AA	AA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LLPH	84298	hgsc.bcm.edu	36	12	64809143	64809144	+	Frame_Shift_Ins	INS	-	-	TT	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LRRIQ1	84125	hgsc.bcm.edu	36	12	83974165	83974166	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
VEZT	55591	hgsc.bcm.edu	36	12	94175100	94175100	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMPO	7112	hgsc.bcm.edu	36	12	97445803	97445803	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MVK	4598	hgsc.bcm.edu	36	12	108503623	108503623	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KDM2B	84678	hgsc.bcm.edu	36	12	120503131	120503132	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ORAI1	84876	hgsc.bcm.edu	36	12	120549157	120549162	+	In_Frame_Del	DEL	CCGCCA	CCGCCA	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	CCGCCA	CCGCCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SETD1B	23067	hgsc.bcm.edu	36	12	120727041	120727041	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR66	144406	hgsc.bcm.edu	36	12	120846148	120846149	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNAH10	196385	hgsc.bcm.edu	36	12	122928352	122928353	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
UBC	7316	hgsc.bcm.edu	36	12	123962220	123962220	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BRCA2	675	hgsc.bcm.edu	36	13	31804566	31804566	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FREM2	341640	hgsc.bcm.edu	36	13	38331580	38331580	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RCBTB2	1102	hgsc.bcm.edu	36	13	47987392	47987393	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ARL11	115761	hgsc.bcm.edu	36	13	49102777	49102777	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TSSK4	283629	hgsc.bcm.edu	36	14	23746484	23746484	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AKAP6	9472	hgsc.bcm.edu	36	14	32361018	32361018	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FANCM	57697	hgsc.bcm.edu	36	14	44715704	44715705	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NID2	22795	hgsc.bcm.edu	36	14	51542217	51542218	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KTN1	3895	hgsc.bcm.edu	36	14	55207228	55207228	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
LTBP2	4054	hgsc.bcm.edu	36	14	74045146	74045147	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
OR4N4	283694	hgsc.bcm.edu	36	15	19884284	19884285	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EIF3J	8669	hgsc.bcm.edu	36	15	42630391	42630391	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLC24A5	283652	hgsc.bcm.edu	36	15	46221692	46221692	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DYX1C1	161582	hgsc.bcm.edu	36	15	53577239	53577239	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SLTM	79811	hgsc.bcm.edu	36	15	56973602	56973602	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NARG2	79664	hgsc.bcm.edu	36	15	58555640	58555641	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
C15orf40	123207	hgsc.bcm.edu	36	15	81468275	81468275	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BLM	641	hgsc.bcm.edu	36	15	89105143	89105143	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF174	7727	hgsc.bcm.edu	36	16	3398325	3398325	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLEC16A	23274	hgsc.bcm.edu	36	16	11045421	11045421	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NDE1	54820	hgsc.bcm.edu	36	16	15695547	15695547	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EEF2K	29904	hgsc.bcm.edu	36	16	22170107	22170107	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ORC6	23594	hgsc.bcm.edu	36	16	45287026	45287026	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
NOD2	64127	hgsc.bcm.edu	36	16	49302832	49302832	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CA7	766	hgsc.bcm.edu	36	16	65442952	65442952	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ELMO3	79767	hgsc.bcm.edu	36	16	65795231	65795231	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PKD1L2	114780	hgsc.bcm.edu	36	16	79721567	79721567	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYH1	4619	hgsc.bcm.edu	36	17	10357918	10357919	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ELAC2	60528	hgsc.bcm.edu	36	17	12855811	12855813	+	In_Frame_Del	DEL	CCT	CCT	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	CCT	CCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
GPR179	440435	hgsc.bcm.edu	36	17	33753032	33753033	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PCGF2	7703	hgsc.bcm.edu	36	17	34150113	34150113	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
STAT5B	6777	hgsc.bcm.edu	36	17	37623761	37623762	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
RUNDC1	146923	hgsc.bcm.edu	36	17	38396948	38396949	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
KIAA1267	284058	hgsc.bcm.edu	36	17	41604751	41604751	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SMURF2	64750	hgsc.bcm.edu	36	17	59972490	59972491	+	Frame_Shift_Ins	INS	-	-	AT	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SMURF2	64750	hgsc.bcm.edu	36	17	59972495	59972496	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AXIN2	8313	hgsc.bcm.edu	36	17	60964367	60964367	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AXIN2	8313	hgsc.bcm.edu	36	17	60984912	60984913	+	Frame_Shift_Del	DEL	TT	TT	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	TT	TT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TMC8	147138	hgsc.bcm.edu	36	17	73640153	73640153	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
EPB41L3	23136	hgsc.bcm.edu	36	18	5414286	5414287	+	Frame_Shift_Del	DEL	AT	AT	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	AT	AT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ROCK1	6093	hgsc.bcm.edu	36	18	16787677	16787677	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ROCK1	6093	hgsc.bcm.edu	36	18	16876541	16876541	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ALPK2	115701	hgsc.bcm.edu	36	18	54397420	54397420	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ATP9B	374868	hgsc.bcm.edu	36	18	74971462	74971462	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SPPL2B	56928	hgsc.bcm.edu	36	19	2295418	2295420	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	AGA	AGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SAFB2	9667	hgsc.bcm.edu	36	19	5541306	5541306	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SAFB2	9667	hgsc.bcm.edu	36	19	5541343	5541343	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CLPP	8192	hgsc.bcm.edu	36	19	6317357	6317358	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DNM2	1785	hgsc.bcm.edu	36	19	10791663	10791665	+	In_Frame_Del	DEL	AGA	AGA	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	AGA	AGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SUGP2	0	hgsc.bcm.edu	36	19	18997394	18997394	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF429	353088	hgsc.bcm.edu	36	19	21511855	21511856	+	Frame_Shift_Del	DEL	AT	AT	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	AT	AT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF30	90075	hgsc.bcm.edu	36	19	40127505	40127505	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
WDR87	83889	hgsc.bcm.edu	36	19	43069847	43069847	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
DLL3	10683	hgsc.bcm.edu	36	19	44690412	44690412	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF45	7596	hgsc.bcm.edu	36	19	49110102	49110102	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
ZNF541	84215	hgsc.bcm.edu	36	19	52717009	52717009	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MAMSTR	284358	hgsc.bcm.edu	36	19	53909918	53909918	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
TEAD2	8463	hgsc.bcm.edu	36	19	54542285	54542285	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
SIGLEC11	114132	hgsc.bcm.edu	36	19	55153882	55153882	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
MYH14	79784	hgsc.bcm.edu	36	19	55466552	55466552	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AIRE	326	hgsc.bcm.edu	36	21	44535201	44535201	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
FAM109B	150368	hgsc.bcm.edu	36	22	40803323	40803323	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
PRRG1	5638	hgsc.bcm.edu	36	X	37197532	37197532	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BCOR	54880	hgsc.bcm.edu	36	X	39815226	39815226	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
CFP	5199	hgsc.bcm.edu	36	X	47371272	47371273	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
AMOT	154796	hgsc.bcm.edu	36	X	111952295	111952295	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
BCORL1	63035	hgsc.bcm.edu	36	X	128974634	128974635	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6162-01A-11D-1650-10	TCGA-CM-6162-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a2dc7d9f-286f-4bbf-8936-df9909801810	4551f706-ecaf-48de-94be-48c3b989c451
