Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
DGKB	1607	hgsc.bcm.edu	36	7	14580404	14580404	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
DNAH11	8701	hgsc.bcm.edu	36	7	21879435	21879435	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
RALA	5898	hgsc.bcm.edu	36	7	39696579	39696579	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
DTX2	113878	hgsc.bcm.edu	36	7	75949845	75949845	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PCLO	27445	hgsc.bcm.edu	36	7	82419430	82419430	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PPP1R3A	5506	hgsc.bcm.edu	36	7	113309379	113309379	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PLXNA4	91584	hgsc.bcm.edu	36	7	131546442	131546442	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
HIPK2	28996	hgsc.bcm.edu	36	7	138962010	138962010	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PRSS2	5645	hgsc.bcm.edu	36	7	142181234	142181234	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CNTNAP2	26047	hgsc.bcm.edu	36	7	147475602	147475602	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
WDR86	349136	hgsc.bcm.edu	36	7	150713116	150713116	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
DPP6	1804	hgsc.bcm.edu	36	7	154192124	154192124	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
HCK	3055	hgsc.bcm.edu	36	20	30126162	30126162	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
EIF6	3692	hgsc.bcm.edu	36	20	33331278	33331278	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MC3R	4159	hgsc.bcm.edu	36	20	54257806	54257806	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KCNQ2	3785	hgsc.bcm.edu	36	20	61508941	61508941	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
RNF215	200312	hgsc.bcm.edu	36	22	29111918	29111918	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CHD8	57680	hgsc.bcm.edu	36	14	20940064	20940064	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NIN	51199	hgsc.bcm.edu	36	14	50291088	50291088	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SYNE2	23224	hgsc.bcm.edu	36	14	63759662	63759662	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
FUT8	2530	hgsc.bcm.edu	36	14	65258391	65258391	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
DCAF4	0	hgsc.bcm.edu	36	14	72490687	72490687	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
C14orf179	112752	hgsc.bcm.edu	36	14	75619373	75619373	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
C14orf118	55668	hgsc.bcm.edu	36	14	75714092	75714092	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ZNF208	7757	hgsc.bcm.edu	36	19	21948710	21948710	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ZNF536	9745	hgsc.bcm.edu	36	19	35628008	35628008	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CEBPA	1050	hgsc.bcm.edu	36	19	38484293	38484293	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
LIN37	55957	hgsc.bcm.edu	36	19	40935910	40935910	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ZNF568	374900	hgsc.bcm.edu	36	19	42132393	42132393	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
B3GNT8	374907	hgsc.bcm.edu	36	19	46624432	46624432	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CIC	23152	hgsc.bcm.edu	36	19	47489118	47489118	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PPP1R13L	10848	hgsc.bcm.edu	36	19	50593144	50593144	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SIGLEC8	27181	hgsc.bcm.edu	36	19	56647502	56647502	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ZNF841	284371	hgsc.bcm.edu	36	19	57261937	57261937	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KIR2DL3	3804	hgsc.bcm.edu	36	19	59947247	59947247	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KIR2DL3	3804	hgsc.bcm.edu	36	19	59947261	59947261	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NLRP8	126205	hgsc.bcm.edu	36	19	61191078	61191078	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ZFP28	140612	hgsc.bcm.edu	36	19	61751015	61751015	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ADAM28	10863	hgsc.bcm.edu	36	8	24255119	24255119	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
WRN	7486	hgsc.bcm.edu	36	8	31144100	31144100	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
FER1L6	654463	hgsc.bcm.edu	36	8	125058959	125058959	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SAMD11	148398	hgsc.bcm.edu	36	1	869180	869180	+	Silent	SNP	C	C	T	rs7523549	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SNIP1	79753	hgsc.bcm.edu	36	1	37790878	37790878	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MAST2	23139	hgsc.bcm.edu	36	1	46266035	46266035	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CYP4A22	284541	hgsc.bcm.edu	36	1	47380454	47380454	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ECHDC2	55268	hgsc.bcm.edu	36	1	53142940	53142940	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
USP24	23358	hgsc.bcm.edu	36	1	55385220	55385220	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MCOLN2	255231	hgsc.bcm.edu	36	1	85194704	85194704	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TGFBR3	7049	hgsc.bcm.edu	36	1	91936263	91936263	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
OVGP1	5016	hgsc.bcm.edu	36	1	111765548	111765548	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SV2A	9900	hgsc.bcm.edu	36	1	148147979	148147979	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PRUNE	58497	hgsc.bcm.edu	36	1	149273181	149273181	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
C1orf77	26097	hgsc.bcm.edu	36	1	151881504	151881504	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ISG20L2	81875	hgsc.bcm.edu	36	1	154963802	154963802	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
OR10T2	128360	hgsc.bcm.edu	36	1	156635630	156635630	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
DCAF6	0	hgsc.bcm.edu	36	1	166280896	166280896	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NCF2	4688	hgsc.bcm.edu	36	1	181810297	181810297	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
RGS21	431704	hgsc.bcm.edu	36	1	190583137	190583137	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PIK3C2B	5287	hgsc.bcm.edu	36	1	202660603	202660603	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TRIM17	51127	hgsc.bcm.edu	36	1	226662961	226662961	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
URB2	9816	hgsc.bcm.edu	36	1	227840191	227840191	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GNPAT	8443	hgsc.bcm.edu	36	1	229468419	229468419	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KCNK1	3775	hgsc.bcm.edu	36	1	231869087	231869087	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
OR2M3	127062	hgsc.bcm.edu	36	1	246433720	246433720	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SOX6	55553	hgsc.bcm.edu	36	11	15951141	15951141	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CDC42BPG	55561	hgsc.bcm.edu	36	11	64359405	64359405	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
FAT3	120114	hgsc.bcm.edu	36	11	92213518	92213518	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PGR	5241	hgsc.bcm.edu	36	11	100438509	100438509	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GRIA4	2893	hgsc.bcm.edu	36	11	105294788	105294788	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ADAMTS15	170689	hgsc.bcm.edu	36	11	129824612	129824612	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
FAM50B	26240	hgsc.bcm.edu	36	6	3795152	3795152	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
HIST1H3C	8352	hgsc.bcm.edu	36	6	26153921	26153921	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
HIST1H3D	8351	hgsc.bcm.edu	36	6	26305191	26305191	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ABCC10	89845	hgsc.bcm.edu	36	6	43508757	43508757	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CRISP3	10321	hgsc.bcm.edu	36	6	49812176	49812176	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
EFHC1	114327	hgsc.bcm.edu	36	6	52437805	52437805	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
COL12A1	1303	hgsc.bcm.edu	36	6	75949717	75949717	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ZNF292	23036	hgsc.bcm.edu	36	6	88023858	88023858	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
LAMA4	3910	hgsc.bcm.edu	36	6	112582800	112582800	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PACRG	135138	hgsc.bcm.edu	36	6	163430388	163430388	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TP53	7157	hgsc.bcm.edu	36	17	7517845	7517845	+	Missense_Mutation	SNP	C	C	T	rs28934576	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TP53	7157	hgsc.bcm.edu	36	17	7518305	7518305	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MYH8	4626	hgsc.bcm.edu	36	17	10240629	10240629	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ADORA2B	136	hgsc.bcm.edu	36	17	15819311	15819311	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NF1	4763	hgsc.bcm.edu	36	17	26586818	26586818	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TMEM132E	124842	hgsc.bcm.edu	36	17	29988905	29988905	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KRTAP9-8	83901	hgsc.bcm.edu	36	17	36648015	36648015	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MRC2	9902	hgsc.bcm.edu	36	17	58096011	58096011	+	Silent	SNP	C	C	T	rs2302242	byCluster;byFrequency;byHapMap	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GPRC5C	55890	hgsc.bcm.edu	36	17	69948221	69948221	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CD300LB	124599	hgsc.bcm.edu	36	17	70033754	70033754	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TMEM104	54868	hgsc.bcm.edu	36	17	70344060	70344060	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GAA	2548	hgsc.bcm.edu	36	17	75693233	75693233	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
APP	351	hgsc.bcm.edu	36	21	26249924	26249924	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
RAB11FIP3	9727	hgsc.bcm.edu	36	16	510529	510529	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
USP7	7874	hgsc.bcm.edu	36	16	8898374	8898374	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NDE1	54820	hgsc.bcm.edu	36	16	15692508	15692508	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
IQCK	124152	hgsc.bcm.edu	36	16	19652577	19652577	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
FTO	79068	hgsc.bcm.edu	36	16	52417307	52417307	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SLC9A5	6553	hgsc.bcm.edu	36	16	65862614	65862614	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MLYCD	23417	hgsc.bcm.edu	36	16	82499353	82499353	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SLC14A1	6563	hgsc.bcm.edu	36	18	41564275	41564275	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SMAD4	4089	hgsc.bcm.edu	36	18	46845836	46845836	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CNTN6	27255	hgsc.bcm.edu	36	3	1244641	1244641	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
VHL	7428	hgsc.bcm.edu	36	3	10163204	10163204	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
VHL	7428	hgsc.bcm.edu	36	3	10163285	10163285	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CTNNB1	1499	hgsc.bcm.edu	36	3	41241163	41241163	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CTNNB1	1499	hgsc.bcm.edu	36	3	41241863	41241863	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CDCP1	64866	hgsc.bcm.edu	36	3	45102499	45102499	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SETD2	29072	hgsc.bcm.edu	36	3	47133201	47133201	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
RRP9	9136	hgsc.bcm.edu	36	3	51950504	51950504	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KBTBD8	84541	hgsc.bcm.edu	36	3	67136673	67136673	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
HTR1F	3355	hgsc.bcm.edu	36	3	88122931	88122931	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SLC35A5	55032	hgsc.bcm.edu	36	3	113782516	113782516	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SIDT1	54847	hgsc.bcm.edu	36	3	114782915	114782915	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
FSTL1	11167	hgsc.bcm.edu	36	3	121613428	121613428	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SI	6490	hgsc.bcm.edu	36	3	166267840	166267840	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NLGN1	22871	hgsc.bcm.edu	36	3	175008216	175008216	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PIK3CA	5290	hgsc.bcm.edu	36	3	180400338	180400338	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
THPO	7066	hgsc.bcm.edu	36	3	185573473	185573473	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MAP3K13	9175	hgsc.bcm.edu	36	3	186680720	186680720	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
LRRC23	10233	hgsc.bcm.edu	36	12	6885138	6885138	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CD163L1	283316	hgsc.bcm.edu	36	12	7477313	7477313	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
DDX47	51202	hgsc.bcm.edu	36	12	12865903	12865903	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KRAS	3845	hgsc.bcm.edu	36	12	25271511	25271511	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KRT7	3855	hgsc.bcm.edu	36	12	50921528	50921528	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
HOXC10	3226	hgsc.bcm.edu	36	12	52665322	52665322	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SMARCC2	6601	hgsc.bcm.edu	36	12	54851365	54851365	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MARS	4141	hgsc.bcm.edu	36	12	56196032	56196032	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MGAT4C	25834	hgsc.bcm.edu	36	12	84898306	84898306	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NUAK1	9891	hgsc.bcm.edu	36	12	104985661	104985661	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CRY1	1407	hgsc.bcm.edu	36	12	105923088	105923088	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TMEM132C	92293	hgsc.bcm.edu	36	12	127594556	127594556	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
EIF2AK4	440275	hgsc.bcm.edu	36	15	38046936	38046936	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
FRMPD4	9758	hgsc.bcm.edu	36	X	12644516	12644516	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
DMD	1756	hgsc.bcm.edu	36	X	32419407	32419407	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
FAM47B	170062	hgsc.bcm.edu	36	X	34872226	34872226	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
WDR45	11152	hgsc.bcm.edu	36	X	48821072	48821072	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CACNA1F	778	hgsc.bcm.edu	36	X	48961886	48961886	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GNL3L	54552	hgsc.bcm.edu	36	X	54601674	54601674	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MTMR8	66036	hgsc.bcm.edu	36	X	63492927	63492927	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
AR	374	hgsc.bcm.edu	36	X	66682835	66682835	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TEX11	56159	hgsc.bcm.edu	36	X	69877331	69877331	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KIAA1210	57481	hgsc.bcm.edu	36	X	118105350	118105350	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
LDOC1	23641	hgsc.bcm.edu	36	X	140098685	140098685	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SPANXD	171489	hgsc.bcm.edu	36	X	140613439	140613439	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
G6PD	8266	hgsc.bcm.edu	36	X	153414465	153414465	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GAK	2580	hgsc.bcm.edu	36	4	860345	860345	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
RGS12	6002	hgsc.bcm.edu	36	4	3288925	3288925	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ZNF518B	85460	hgsc.bcm.edu	36	4	10055184	10055184	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PROM1	8842	hgsc.bcm.edu	36	4	15629231	15629231	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
LRRC66	339977	hgsc.bcm.edu	36	4	52555528	52555528	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TACR3	6870	hgsc.bcm.edu	36	4	104730348	104730348	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TBCK	0	hgsc.bcm.edu	36	4	107374198	107374198	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CLGN	4312	hgsc.bcm.edu	36	4	141541109	141541109	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NEK1	4750	hgsc.bcm.edu	36	4	170734792	170734792	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TRIM54	57159	hgsc.bcm.edu	36	2	27375030	27375030	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ALK	238	hgsc.bcm.edu	36	2	29299889	29299889	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
C2orf81	388963	hgsc.bcm.edu	36	2	74496513	74496513	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
C2orf29	55571	hgsc.bcm.edu	36	2	101240820	101240820	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CCDC93	54520	hgsc.bcm.edu	36	2	118432472	118432472	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GLI2	2736	hgsc.bcm.edu	36	2	121464587	121464587	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NCKAP5	0	hgsc.bcm.edu	36	2	133259086	133259086	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
LRP1B	53353	hgsc.bcm.edu	36	2	141176527	141176527	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GRB14	2888	hgsc.bcm.edu	36	2	165057926	165057926	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SCN2A	6326	hgsc.bcm.edu	36	2	165907089	165907089	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SCN7A	6332	hgsc.bcm.edu	36	2	166970659	166970659	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
LRP2	4036	hgsc.bcm.edu	36	2	169752906	169752906	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TTN	7273	hgsc.bcm.edu	36	2	179103896	179103896	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TTN	7273	hgsc.bcm.edu	36	2	179109244	179109244	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TTN	7273	hgsc.bcm.edu	36	2	179112911	179112911	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
INPP1	3628	hgsc.bcm.edu	36	2	190944011	190944011	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GTF3C3	9330	hgsc.bcm.edu	36	2	197348114	197348114	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
UNC80	285175	hgsc.bcm.edu	36	2	210386603	210386603	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MYL1	4632	hgsc.bcm.edu	36	2	210867220	210867220	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ERBB4	2066	hgsc.bcm.edu	36	2	212697732	212697732	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ATIC	471	hgsc.bcm.edu	36	2	215911800	215911800	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PAX3	5077	hgsc.bcm.edu	36	2	222775056	222775056	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SPHKAP	80309	hgsc.bcm.edu	36	2	228592494	228592494	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GIGYF2	26058	hgsc.bcm.edu	36	2	233329216	233329216	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KLHL30	377007	hgsc.bcm.edu	36	2	238724227	238724227	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PTPRD	5789	hgsc.bcm.edu	36	9	8511372	8511372	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PTPRD	5789	hgsc.bcm.edu	36	9	8626825	8626825	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KIAA1797	54914	hgsc.bcm.edu	36	9	20913668	20913668	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
FRMPD1	22844	hgsc.bcm.edu	36	9	37735742	37735742	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GDA	9615	hgsc.bcm.edu	36	9	74053029	74053029	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PCSK5	5125	hgsc.bcm.edu	36	9	77974505	77974505	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NTRK2	4915	hgsc.bcm.edu	36	9	86826096	86826096	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ZFP37	7539	hgsc.bcm.edu	36	9	114858732	114858732	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GAPVD1	26130	hgsc.bcm.edu	36	9	127123550	127123550	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
GOLGA2	2801	hgsc.bcm.edu	36	9	130062776	130062776	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ABL1	25	hgsc.bcm.edu	36	9	132743728	132743728	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
COL5A1	1289	hgsc.bcm.edu	36	9	136760439	136760439	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
FLT1	2321	hgsc.bcm.edu	36	13	27817596	27817596	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
AKAP11	11215	hgsc.bcm.edu	36	13	41773416	41773416	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CKAP2	26586	hgsc.bcm.edu	36	13	51946157	51946157	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KLF5	688	hgsc.bcm.edu	36	13	72534031	72534031	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SLITRK1	114798	hgsc.bcm.edu	36	13	83352764	83352764	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
RAP2A	5911	hgsc.bcm.edu	36	13	96914666	96914666	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
COL4A1	1282	hgsc.bcm.edu	36	13	109602735	109602735	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PFKP	5214	hgsc.bcm.edu	36	10	3136039	3136039	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MYO3A	53904	hgsc.bcm.edu	36	10	26395927	26395927	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
DKK1	22943	hgsc.bcm.edu	36	10	53746445	53746445	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MINPP1	9562	hgsc.bcm.edu	36	10	89258123	89258123	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
CYP2C8	1558	hgsc.bcm.edu	36	10	96814633	96814633	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
RRP12	23223	hgsc.bcm.edu	36	10	99131476	99131476	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
C10orf79	80217	hgsc.bcm.edu	36	10	105980448	105980448	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PNLIPRP3	119548	hgsc.bcm.edu	36	10	118226224	118226224	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
C10orf137	26098	hgsc.bcm.edu	36	10	127399788	127399788	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TUBGCP2	10844	hgsc.bcm.edu	36	10	134944864	134944864	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SLC6A19	340024	hgsc.bcm.edu	36	5	1274332	1274332	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
DNAH5	1767	hgsc.bcm.edu	36	5	13863293	13863293	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
RICTOR	253260	hgsc.bcm.edu	36	5	38998886	38998886	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MAP1B	4131	hgsc.bcm.edu	36	5	71526972	71526972	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
F2RL1	2150	hgsc.bcm.edu	36	5	76164864	76164864	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
FER	2241	hgsc.bcm.edu	36	5	108544482	108544482	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
APC	324	hgsc.bcm.edu	36	5	112144489	112144489	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
APC	324	hgsc.bcm.edu	36	5	112144491	112144491	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
APC	324	hgsc.bcm.edu	36	5	112202967	112202967	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
APC	324	hgsc.bcm.edu	36	5	112203812	112203812	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
HSD17B4	3295	hgsc.bcm.edu	36	5	118863134	118863134	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TXNDC15	79770	hgsc.bcm.edu	36	5	134257231	134257231	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KDM3B	51780	hgsc.bcm.edu	36	5	137755844	137755844	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PCDHB6	56130	hgsc.bcm.edu	36	5	140510435	140510435	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TIMD4	91937	hgsc.bcm.edu	36	5	156311267	156311267	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PANK3	79646	hgsc.bcm.edu	36	5	167923586	167923586	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
RANBP17	64901	hgsc.bcm.edu	36	5	170284046	170284046	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
STC2	8614	hgsc.bcm.edu	36	5	172677620	172677620	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PLXNA4	91584	hgsc.bcm.edu	36	7	131546443	131546443	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
BCAS3	54828	hgsc.bcm.edu	36	17	56356549	56356549	+	Splice_Site	SNP	G	G	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
MNS1	55329	hgsc.bcm.edu	36	15	54513627	54513627	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PCDH15	65217	hgsc.bcm.edu	36	10	55296407	55296407	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
LCE4A	199834	hgsc.bcm.edu	36	1	150948304	150948305	+	In_Frame_Ins	INS	-	-	AGCTCTGGGGGCTGCTGT	rs6143428	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PPP1R12B	4660	hgsc.bcm.edu	36	1	200673813	200673813	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TAF1B	9014	hgsc.bcm.edu	36	2	9907022	9907022	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KAT2B	8850	hgsc.bcm.edu	36	3	20088856	20088857	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ZNF595	152687	hgsc.bcm.edu	36	4	76016	76017	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
HGFAC	3083	hgsc.bcm.edu	36	4	3415567	3415582	+	Frame_Shift_Del	DEL	CCCTGGATCCCTGTGC	CCCTGGATCCCTGTGC	-	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	CCCTGGATCCCTGTGC	CCCTGGATCCCTGTGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
LOC286238	286238	hgsc.bcm.edu	36	9	90452163	90452164	+	In_Frame_Ins	INS	-	-	TGG	rs5899049	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TCF7L2	6934	hgsc.bcm.edu	36	10	114915306	114915307	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NR1H3	10062	hgsc.bcm.edu	36	11	47237362	47237363	+	Frame_Shift_Ins	INS	-	-	GC	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
ESRRA	2101	hgsc.bcm.edu	36	11	63839872	63839874	+	In_Frame_Del	DEL	GGG	GGG	-	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	GGG	GGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
SMTNL2	342527	hgsc.bcm.edu	36	17	4445228	4445234	+	Frame_Shift_Del	DEL	GCAGCCG	GCAGCCG	-	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	GCAGCCG	GCAGCCG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
LGALS9B	284194	hgsc.bcm.edu	36	17	20311374	20311375	+	Frame_Shift_Ins	INS	-	-	TC	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
PPM1E	22843	hgsc.bcm.edu	36	17	54188453	54188454	+	In_Frame_Ins	INS	-	-	CCGGAA	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
TXNDC2	84203	hgsc.bcm.edu	36	18	9877389	9877433	+	In_Frame_Del	DEL	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	-	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
KRTAP19-6	337973	hgsc.bcm.edu	36	21	30835853	30835853	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
NEFH	4744	hgsc.bcm.edu	36	22	28215567	28215568	+	In_Frame_Ins	INS	-	-	AAGTCCCCTGAGAAGGCC	novel	unknown	TCGA-CM-6163-01A-11D-1650-10	TCGA-CM-6163-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c9b847c5-e464-4a97-850a-6fee0a8db6ed	17c273d6-d45f-41a4-b390-28ab4c00597d
