Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
INTS1	26173	hgsc.bcm.edu	36	7	1504978	1504978	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ACTB	60	hgsc.bcm.edu	36	7	5535519	5535519	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ABCA13	154664	hgsc.bcm.edu	36	7	48283060	48283060	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TBL2	26608	hgsc.bcm.edu	36	7	72622942	72622942	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
GTF2IRD2	84163	hgsc.bcm.edu	36	7	73849401	73849401	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
LRRN3	54674	hgsc.bcm.edu	36	7	110550786	110550786	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
MET	8731	hgsc.bcm.edu	36	7	116206082	116206082	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
KCND2	3751	hgsc.bcm.edu	36	7	119702622	119702622	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
JHDM1D	80853	hgsc.bcm.edu	36	7	139473063	139473063	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ATG9B	285973	hgsc.bcm.edu	36	7	150345082	150345082	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PLCB1	23236	hgsc.bcm.edu	36	20	8665699	8665699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CHD6	84181	hgsc.bcm.edu	36	20	39483715	39483715	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CASS4	57091	hgsc.bcm.edu	36	20	54467028	54467028	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TGM1	7051	hgsc.bcm.edu	36	14	23793202	23793202	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SYT16	83851	hgsc.bcm.edu	36	14	61620689	61620689	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TDP1	55775	hgsc.bcm.edu	36	14	89525140	89525140	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
MKNK2	2872	hgsc.bcm.edu	36	19	1994171	1994171	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
MUC16	94025	hgsc.bcm.edu	36	19	8927117	8927117	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ICAM3	3385	hgsc.bcm.edu	36	19	10305909	10305909	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
RAB3D	9545	hgsc.bcm.edu	36	19	11307187	11307187	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ZNF441	126068	hgsc.bcm.edu	36	19	11753138	11753138	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CC2D1A	54862	hgsc.bcm.edu	36	19	13895398	13895398	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
KIAA1683	80726	hgsc.bcm.edu	36	19	18238290	18238290	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
FKBP8	23770	hgsc.bcm.edu	36	19	18504019	18504019	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ZNF99	7652	hgsc.bcm.edu	36	19	22733192	22733192	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CEACAM5	1048	hgsc.bcm.edu	36	19	46910891	46910891	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CACNG7	59284	hgsc.bcm.edu	36	19	59136657	59136657	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
STC1	6781	hgsc.bcm.edu	36	8	23764806	23764806	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
MCM4	4173	hgsc.bcm.edu	36	8	49037301	49037301	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CHD7	55636	hgsc.bcm.edu	36	8	61913209	61913209	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ARFGEF1	10565	hgsc.bcm.edu	36	8	68341919	68341919	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ARC	23237	hgsc.bcm.edu	36	8	143692303	143692303	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CAMTA1	23261	hgsc.bcm.edu	36	1	7646015	7646015	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CROCC	9696	hgsc.bcm.edu	36	1	17144625	17144625	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PADI3	51702	hgsc.bcm.edu	36	1	17461237	17461237	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TAF12	6883	hgsc.bcm.edu	36	1	28821047	28821047	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CSMD2	114784	hgsc.bcm.edu	36	1	33884850	33884850	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CSMD2	114784	hgsc.bcm.edu	36	1	33937112	33937112	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
GNL2	29889	hgsc.bcm.edu	36	1	37812875	37812875	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
MACF1	23499	hgsc.bcm.edu	36	1	39672881	39672881	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
YBX1	4904	hgsc.bcm.edu	36	1	42935445	42935445	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ACOT11	26027	hgsc.bcm.edu	36	1	54839555	54839555	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SLC35D1	23169	hgsc.bcm.edu	36	1	67258703	67258703	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ABCA4	24	hgsc.bcm.edu	36	1	94275484	94275484	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TAF13	6884	hgsc.bcm.edu	36	1	109408709	109408709	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
BCAS2	10286	hgsc.bcm.edu	36	1	114919879	114919879	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SV2A	9900	hgsc.bcm.edu	36	1	148147730	148147730	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ISG20L2	81875	hgsc.bcm.edu	36	1	154959854	154959854	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ARHGEF11	9826	hgsc.bcm.edu	36	1	155176066	155176066	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CD1E	913	hgsc.bcm.edu	36	1	156590845	156590845	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PLA2G4A	5321	hgsc.bcm.edu	36	1	185129864	185129864	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ATP2B4	493	hgsc.bcm.edu	36	1	201947826	201947826	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PROX1	5629	hgsc.bcm.edu	36	1	212251629	212251629	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
LBR	3930	hgsc.bcm.edu	36	1	223665755	223665755	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
IFITM3	10410	hgsc.bcm.edu	36	11	309855	309855	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ZDHHC13	54503	hgsc.bcm.edu	36	11	19148572	19148572	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SLC22A10	387775	hgsc.bcm.edu	36	11	62814454	62814454	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PITPNM1	9600	hgsc.bcm.edu	36	11	67016211	67016211	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SHANK2	22941	hgsc.bcm.edu	36	11	70183654	70183654	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
RNF169	254225	hgsc.bcm.edu	36	11	74224688	74224688	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
GDPD4	220032	hgsc.bcm.edu	36	11	76621758	76621758	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ODZ4	26011	hgsc.bcm.edu	36	11	78458506	78458506	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PCF11	51585	hgsc.bcm.edu	36	11	82558147	82558147	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
DLG2	4355	hgsc.bcm.edu	36	11	84500381	84500381	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ALG9	79796	hgsc.bcm.edu	36	11	111229326	111229326	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SIK3	23387	hgsc.bcm.edu	36	11	116239699	116239699	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
KIRREL3	84623	hgsc.bcm.edu	36	11	125896441	125896441	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
HIST1H1B	3009	hgsc.bcm.edu	36	6	27943207	27943207	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ZNF76	7629	hgsc.bcm.edu	36	6	35366102	35366102	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TREML4	285852	hgsc.bcm.edu	36	6	41304468	41304468	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ROS1	6098	hgsc.bcm.edu	36	6	117822134	117822134	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PTPRK	5796	hgsc.bcm.edu	36	6	128361691	128361691	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
GRM1	2911	hgsc.bcm.edu	36	6	146522389	146522389	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SYNE1	23345	hgsc.bcm.edu	36	6	152779811	152779811	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
MAP3K4	4216	hgsc.bcm.edu	36	6	161430421	161430421	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
THBS2	7058	hgsc.bcm.edu	36	6	169379677	169379677	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TP53	7157	hgsc.bcm.edu	36	17	7517628	7517628	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
DNAH2	146754	hgsc.bcm.edu	36	17	7676935	7676935	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
RCVRN	5957	hgsc.bcm.edu	36	17	9749064	9749064	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
DNAH9	1770	hgsc.bcm.edu	36	17	11730887	11730887	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ARHGAP23	57636	hgsc.bcm.edu	36	17	33892291	33892291	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
GPRC5C	55890	hgsc.bcm.edu	36	17	69954622	69954622	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
HLCS	3141	hgsc.bcm.edu	36	21	37231489	37231489	+	Silent	SNP	C	C	T	rs61732504	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
RSPH1	89765	hgsc.bcm.edu	36	21	42769117	42769117	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
GRIN2A	2903	hgsc.bcm.edu	36	16	9765039	9765039	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
NOD2	64127	hgsc.bcm.edu	36	16	49303034	49303034	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PDP2	57546	hgsc.bcm.edu	36	16	65476656	65476656	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
HYDIN	54768	hgsc.bcm.edu	36	16	69707110	69707110	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
EPB41L3	23136	hgsc.bcm.edu	36	18	5406037	5406037	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
LAMA1	284217	hgsc.bcm.edu	36	18	6982560	6982560	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
OSBPL1A	114876	hgsc.bcm.edu	36	18	20000585	20000585	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SMAD4	4089	hgsc.bcm.edu	36	18	46845823	46845823	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SERPINB2	5055	hgsc.bcm.edu	36	18	59715338	59715338	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CNTN6	27255	hgsc.bcm.edu	36	3	1344219	1344219	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
GRM7	2917	hgsc.bcm.edu	36	3	7595691	7595691	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
FGD5	152273	hgsc.bcm.edu	36	3	14835765	14835765	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TOP2B	7155	hgsc.bcm.edu	36	3	25631964	25631964	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
AZI2	113451	hgsc.bcm.edu	36	3	28355078	28355078	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ITGA9	3680	hgsc.bcm.edu	36	3	37758238	37758238	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
COL8A1	1295	hgsc.bcm.edu	36	3	100995973	100995973	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PARP9	83666	hgsc.bcm.edu	36	3	123738590	123738590	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ATR	390502	hgsc.bcm.edu	36	3	143668056	143668056	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
MME	4321	hgsc.bcm.edu	36	3	156315589	156315589	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PIK3CA	5290	hgsc.bcm.edu	36	3	180410670	180410670	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PIK3CA	5290	hgsc.bcm.edu	36	3	180434756	180434756	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ABCF3	55324	hgsc.bcm.edu	36	3	185388661	185388661	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ACAP2	23527	hgsc.bcm.edu	36	3	196497865	196497865	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
KIAA0528	9847	hgsc.bcm.edu	36	12	22562331	22562331	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PRKAG1	5571	hgsc.bcm.edu	36	12	47693139	47693139	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
BTBD11	121551	hgsc.bcm.edu	36	12	106536182	106536182	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
P2RX7	5027	hgsc.bcm.edu	36	12	120084699	120084699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TMEM132B	114795	hgsc.bcm.edu	36	12	124704433	124704433	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TMEM132D	121256	hgsc.bcm.edu	36	12	128125359	128125359	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
HERC2	8924	hgsc.bcm.edu	36	15	26105371	26105371	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CYBB	1536	hgsc.bcm.edu	36	X	37548294	37548294	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TEX11	56159	hgsc.bcm.edu	36	X	69861895	69861895	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SLC16A2	6567	hgsc.bcm.edu	36	X	73668016	73668016	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
GUCY2F	2986	hgsc.bcm.edu	36	X	108605792	108605792	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
IL13RA2	3598	hgsc.bcm.edu	36	X	114151552	114151552	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
LONRF3	79836	hgsc.bcm.edu	36	X	118008481	118008481	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ACTRT1	139741	hgsc.bcm.edu	36	X	127012920	127012920	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ARHGEF6	9459	hgsc.bcm.edu	36	X	135623181	135623181	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
WFS1	7466	hgsc.bcm.edu	36	4	6339768	6339768	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
KIT	3815	hgsc.bcm.edu	36	4	55294044	55294044	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
KDR	3791	hgsc.bcm.edu	36	4	55648563	55648563	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
POLR2B	5431	hgsc.bcm.edu	36	4	57578609	57578609	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
HELQ	113510	hgsc.bcm.edu	36	4	84556969	84556969	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
MTTP	4571	hgsc.bcm.edu	36	4	100759233	100759233	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ANK2	287	hgsc.bcm.edu	36	4	114377641	114377641	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ANK2	287	hgsc.bcm.edu	36	4	114497274	114497274	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TRIML2	205860	hgsc.bcm.edu	36	4	189249947	189249947	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
GTF3C2	2976	hgsc.bcm.edu	36	2	27419707	27419707	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ALK	238	hgsc.bcm.edu	36	2	29269623	29269623	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
EML6	400954	hgsc.bcm.edu	36	2	54940267	54940267	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
FOXI3	344167	hgsc.bcm.edu	36	2	88529074	88529074	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
MRPS5	64969	hgsc.bcm.edu	36	2	95139419	95139419	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ARHGEF4	50649	hgsc.bcm.edu	36	2	131515410	131515410	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
LCT	3938	hgsc.bcm.edu	36	2	136282786	136282786	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
HNMT	3176	hgsc.bcm.edu	36	2	138487894	138487894	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SCN3A	6328	hgsc.bcm.edu	36	2	165720557	165720557	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
XIRP2	129446	hgsc.bcm.edu	36	2	167808314	167808314	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SP3	6670	hgsc.bcm.edu	36	2	174528862	174528862	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TTN	7273	hgsc.bcm.edu	36	2	179293943	179293943	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TTN	7273	hgsc.bcm.edu	36	2	179300650	179300650	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ASNSD1	54529	hgsc.bcm.edu	36	2	190239832	190239832	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
MSTN	2660	hgsc.bcm.edu	36	2	190630391	190630391	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
FN1	2335	hgsc.bcm.edu	36	2	216006396	216006396	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
KIAA2026	158358	hgsc.bcm.edu	36	9	5919105	5919105	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
KIAA1797	54914	hgsc.bcm.edu	36	9	20864703	20864703	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
HNRNPK	3190	hgsc.bcm.edu	36	9	85782425	85782425	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
NTRK2	4915	hgsc.bcm.edu	36	9	86738939	86738939	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TNC	7134	hgsc.bcm.edu	36	9	116884825	116884825	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SARDH	1757	hgsc.bcm.edu	36	9	135585099	135585099	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SEC16A	9919	hgsc.bcm.edu	36	9	138465632	138465632	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
RB1	5925	hgsc.bcm.edu	36	13	47814850	47814850	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
GAD2	2572	hgsc.bcm.edu	36	10	26615386	26615386	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ARHGAP22	58504	hgsc.bcm.edu	36	10	49328843	49328843	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CDH23	64072	hgsc.bcm.edu	36	10	73075694	73075694	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PTEN	5728	hgsc.bcm.edu	36	10	89710679	89710679	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PTEN	5728	hgsc.bcm.edu	36	10	89710680	89710680	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
MGEA5	10724	hgsc.bcm.edu	36	10	103540644	103540644	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TCF7L2	6934	hgsc.bcm.edu	36	10	114895811	114895811	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ADAMTS16	170690	hgsc.bcm.edu	36	5	5371278	5371278	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
DAB2	1601	hgsc.bcm.edu	36	5	39418674	39418674	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
RNF180	285671	hgsc.bcm.edu	36	5	63545588	63545588	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PIK3R1	5295	hgsc.bcm.edu	36	5	67627866	67627866	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ZFYVE16	9765	hgsc.bcm.edu	36	5	79805382	79805382	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
SEMA6A	57556	hgsc.bcm.edu	36	5	115811359	115811359	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ALDH7A1	501	hgsc.bcm.edu	36	5	125915645	125915645	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
PCDHGA7	56108	hgsc.bcm.edu	36	5	140742925	140742925	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ADAM19	8728	hgsc.bcm.edu	36	5	156868898	156868898	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CANX	821	hgsc.bcm.edu	36	5	179082523	179082523	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
LRRC7	57554	hgsc.bcm.edu	36	1	70274896	70274896	+	Splice_Site	SNP	G	G	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TP53	7157	hgsc.bcm.edu	36	17	7517577	7517577	+	Splice_Site	SNP	C	C	A	rs11575997	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
USP9X	8239	hgsc.bcm.edu	36	X	40906986	40906986	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
RPL22	6146	hgsc.bcm.edu	36	1	6180371	6180372	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
RPL5	6125	hgsc.bcm.edu	36	1	93071782	93071785	+	Frame_Shift_Del	DEL	ACAA	ACAA	-	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	ACAA	ACAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
IWS1	55677	hgsc.bcm.edu	36	2	127972221	127972222	+	In_Frame_Ins	INS	-	-	TCT	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944292	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
APC	324	hgsc.bcm.edu	36	5	112203392	112203392	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
TRAF3IP2	10758	hgsc.bcm.edu	36	6	111987352	111987353	+	Frame_Shift_Del	INS	-	-	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CTSL2	1515	hgsc.bcm.edu	36	9	98838693	98838694	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CASP5	838	hgsc.bcm.edu	36	11	104383251	104383251	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ATXN3	4287	hgsc.bcm.edu	36	14	91607107	91607109	+	In_Frame_Del	DEL	CCT	CCT	-	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	CCT	CCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
VASN	114990	hgsc.bcm.edu	36	16	4372497	4372497	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
CDRT1	374286	hgsc.bcm.edu	36	17	15463163	15463166	+	Frame_Shift_Del	DEL	TGGG	TGGG	-	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	TGGG	TGGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
C17orf64	124773	hgsc.bcm.edu	36	17	55854769	55854770	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
ATP8B1	5205	hgsc.bcm.edu	36	18	53479685	53479686	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
DEFB126	81623	hgsc.bcm.edu	36	20	74311	74312	+	Frame_Shift_Del	DEL	CC	CC	-	novel	unknown	TCGA-CM-6165-01A-11D-1650-10	TCGA-CM-6165-10A-01D-1650-10	CC	CC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	598d953e-9936-4a0f-a418-68b4f4744d59	2b3660ad-c09c-467d-99ab-be82b1488ce0
