Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
TNRC18	84629	hgsc.bcm.edu	36	7	5319058	5319058	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ABCB5	340273	hgsc.bcm.edu	36	7	20704569	20704569	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
GLI3	2737	hgsc.bcm.edu	36	7	42054719	42054719	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
EGFR	1956	hgsc.bcm.edu	36	7	55209981	55209981	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SAMD9L	219285	hgsc.bcm.edu	36	7	92599292	92599292	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PEG10	23089	hgsc.bcm.edu	36	7	94132322	94132322	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
DYNC1I1	1780	hgsc.bcm.edu	36	7	95564809	95564809	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ACTL6B	51412	hgsc.bcm.edu	36	7	100081854	100081854	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MET	8731	hgsc.bcm.edu	36	7	116204736	116204736	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
WDR91	29062	hgsc.bcm.edu	36	7	134544138	134544138	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TBXAS1	6916	hgsc.bcm.edu	36	7	139299705	139299705	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
BRAF	673	hgsc.bcm.edu	36	7	140099653	140099653	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
KIAA1147	57189	hgsc.bcm.edu	36	7	141011191	141011191	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MGAM	8972	hgsc.bcm.edu	36	7	141445976	141445976	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
EPHB6	2051	hgsc.bcm.edu	36	7	142274941	142274941	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ABCB8	11194	hgsc.bcm.edu	36	7	150361712	150361712	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
NCAPG2	54892	hgsc.bcm.edu	36	7	158141766	158141766	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ADRA1D	146	hgsc.bcm.edu	36	20	4176636	4176636	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PLK1S1	0	hgsc.bcm.edu	36	20	21144226	21144226	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ASXL1	171023	hgsc.bcm.edu	36	20	30485381	30485381	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ASXL1	171023	hgsc.bcm.edu	36	20	30486501	30486501	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
C20orf185	359710	hgsc.bcm.edu	36	20	31108070	31108070	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CTNNBL1	56259	hgsc.bcm.edu	36	20	35922123	35922123	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PTPRT	11122	hgsc.bcm.edu	36	20	40412765	40412765	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
FAM65C	140876	hgsc.bcm.edu	36	20	48658663	48658663	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CASS4	57091	hgsc.bcm.edu	36	20	54460399	54460399	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ZNF831	128611	hgsc.bcm.edu	36	20	57200093	57200093	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
NF2	4771	hgsc.bcm.edu	36	22	28380664	28380664	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
GGA1	26088	hgsc.bcm.edu	36	22	36349385	36349385	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
OR10G3	26533	hgsc.bcm.edu	36	14	21108512	21108512	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
C14orf43	91748	hgsc.bcm.edu	36	14	73275141	73275141	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
POLRMT	5442	hgsc.bcm.edu	36	19	573708	573708	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
THOP1	7064	hgsc.bcm.edu	36	19	2745858	2745858	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TMEM146	257062	hgsc.bcm.edu	36	19	5695462	5695462	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MUC16	94025	hgsc.bcm.edu	36	19	8931811	8931811	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SLC44A2	57153	hgsc.bcm.edu	36	19	10603770	10603770	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ZNF563	147837	hgsc.bcm.edu	36	19	12294523	12294523	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PGLYRP2	114770	hgsc.bcm.edu	36	19	15440506	15440506	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CATSPERG	0	hgsc.bcm.edu	36	19	43553174	43553174	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MAP4K1	11184	hgsc.bcm.edu	36	19	43796736	43796736	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PRX	57716	hgsc.bcm.edu	36	19	45594452	45594452	+	Silent	SNP	C	C	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CLASRP	0	hgsc.bcm.edu	36	19	50257284	50257284	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MBOAT7	79143	hgsc.bcm.edu	36	19	59369854	59369854	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ENTPD4	9583	hgsc.bcm.edu	36	8	23361323	23361323	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RP1	10982	hgsc.bcm.edu	36	8	55699976	55699976	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
FAM110B	90362	hgsc.bcm.edu	36	8	59221603	59221603	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RRS1	23212	hgsc.bcm.edu	36	8	67504916	67504916	+	Silent	SNP	G	G	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PREX2	80243	hgsc.bcm.edu	36	8	69152226	69152226	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
FZD6	8323	hgsc.bcm.edu	36	8	104411394	104411394	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ZNF696	79943	hgsc.bcm.edu	36	8	144449832	144449832	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CASP9	842	hgsc.bcm.edu	36	1	15717273	15717273	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PADI1	29943	hgsc.bcm.edu	36	1	17439783	17439783	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
KIAA0467	23334	hgsc.bcm.edu	36	1	43664194	43664194	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RNF220	55182	hgsc.bcm.edu	36	1	44650950	44650950	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
C8B	732	hgsc.bcm.edu	36	1	57187955	57187955	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TYW3	127253	hgsc.bcm.edu	36	1	74974866	74974866	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ELTD1	64123	hgsc.bcm.edu	36	1	79156241	79156241	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
LRRC8B	23507	hgsc.bcm.edu	36	1	89822191	89822191	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
BTBD8	284697	hgsc.bcm.edu	36	1	92340677	92340677	+	Missense_Mutation	SNP	A	A	G	rs17131602	byCluster;byFrequency;byHapMap	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
LPPR5	0	hgsc.bcm.edu	36	1	99242800	99242800	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
AP4B1	10717	hgsc.bcm.edu	36	1	114244293	114244293	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SPAG17	200162	hgsc.bcm.edu	36	1	118441956	118441956	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RGL1	64333	hgsc.bcm.edu	36	1	182116469	182116469	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
NAV1	89796	hgsc.bcm.edu	36	1	200043898	200043898	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
LMOD1	25802	hgsc.bcm.edu	36	1	200136201	200136201	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SYT14	255928	hgsc.bcm.edu	36	1	208261191	208261191	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
USH2A	7399	hgsc.bcm.edu	36	1	214658563	214658563	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
IFITM3	10410	hgsc.bcm.edu	36	11	310606	310606	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
INSC	387755	hgsc.bcm.edu	36	11	15154127	15154127	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ALX4	60529	hgsc.bcm.edu	36	11	44243191	44243191	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
FLRT1	23769	hgsc.bcm.edu	36	11	63641249	63641249	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MTL5	9633	hgsc.bcm.edu	36	11	68234924	68234924	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CNTN5	53942	hgsc.bcm.edu	36	11	99600707	99600707	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ATM	472	hgsc.bcm.edu	36	11	107665691	107665691	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ATM	472	hgsc.bcm.edu	36	11	107680673	107680673	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
FEZ1	11178	hgsc.bcm.edu	36	11	124831125	124831125	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
NCAPD3	23310	hgsc.bcm.edu	36	11	133595723	133595723	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TUBB2B	347733	hgsc.bcm.edu	36	6	3171485	3171485	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
HIST1H4L	8368	hgsc.bcm.edu	36	6	27949077	27949077	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MOG	4340	hgsc.bcm.edu	36	6	29746141	29746141	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TNXB	7148	hgsc.bcm.edu	36	6	32144196	32144196	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TFEB	7942	hgsc.bcm.edu	36	6	41766892	41766892	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MRPL14	64928	hgsc.bcm.edu	36	6	44189819	44189819	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
BAI3	577	hgsc.bcm.edu	36	6	69405610	69405610	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
BAI3	577	hgsc.bcm.edu	36	6	69760508	69760508	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RIMS1	22999	hgsc.bcm.edu	36	6	73025447	73025447	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
KCNQ5	56479	hgsc.bcm.edu	36	6	73890945	73890945	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
COL12A1	1303	hgsc.bcm.edu	36	6	75947431	75947431	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
NCOA7	135112	hgsc.bcm.edu	36	6	126291480	126291480	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TNFAIP3	7128	hgsc.bcm.edu	36	6	138234150	138234150	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CNKSR3	154043	hgsc.bcm.edu	36	6	154785389	154785389	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
T	6862	hgsc.bcm.edu	36	6	166500233	166500233	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SFT2D1	113402	hgsc.bcm.edu	36	6	166659635	166659635	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SMYD4	114826	hgsc.bcm.edu	36	17	1631419	1631419	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
KIAA0664	23277	hgsc.bcm.edu	36	17	2542696	2542696	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TP53	7157	hgsc.bcm.edu	36	17	7517793	7517793	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
NCOR1	9611	hgsc.bcm.edu	36	17	15936017	15936017	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RHBDL3	162494	hgsc.bcm.edu	36	17	27656501	27656501	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MLLT6	4302	hgsc.bcm.edu	36	17	34127731	34127731	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
KRTAP4-3	85290	hgsc.bcm.edu	36	17	36577893	36577893	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SUPT4H1	6827	hgsc.bcm.edu	36	17	53784482	53784482	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TSEN54	283989	hgsc.bcm.edu	36	17	71031377	71031377	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MGAT5B	146664	hgsc.bcm.edu	36	17	72389854	72389854	+	Missense_Mutation	SNP	G	G	A	rs571264	by2Hit2Allele;byCluster;byFrequency;byHapMap;byOtherPop	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CARD14	79092	hgsc.bcm.edu	36	17	75786946	75786946	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RPTOR	57521	hgsc.bcm.edu	36	17	76497243	76497243	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
C21orf58	54058	hgsc.bcm.edu	36	21	46555846	46555846	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MKL2	57496	hgsc.bcm.edu	36	16	14247013	14247013	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
GPT2	84706	hgsc.bcm.edu	36	16	45492158	45492158	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PLEKHG4	25894	hgsc.bcm.edu	36	16	65878224	65878224	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CDH1	51343	hgsc.bcm.edu	36	16	67393130	67393130	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
KLHL36	79786	hgsc.bcm.edu	36	16	83248777	83248777	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MAPK4	5596	hgsc.bcm.edu	36	18	46495533	46495533	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SMAD4	4089	hgsc.bcm.edu	36	18	46827542	46827542	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SMAD4	4089	hgsc.bcm.edu	36	18	46845807	46845807	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SMAD4	4089	hgsc.bcm.edu	36	18	46845929	46845929	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ALPK2	115701	hgsc.bcm.edu	36	18	54355094	54355094	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
LMAN1	3998	hgsc.bcm.edu	36	18	55149684	55149684	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RAD18	56852	hgsc.bcm.edu	36	3	8958369	8958369	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
VHL	7428	hgsc.bcm.edu	36	3	10163210	10163210	+	Missense_Mutation	SNP	T	T	C	rs5030830	byCluster	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
EFHB	151651	hgsc.bcm.edu	36	3	19899206	19899206	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SCN5A	6331	hgsc.bcm.edu	36	3	38567981	38567981	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CTNNB1	1499	hgsc.bcm.edu	36	3	41241139	41241139	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
QARS	5859	hgsc.bcm.edu	36	3	49112485	49112485	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
DAG1	1605	hgsc.bcm.edu	36	3	49543632	49543632	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
AMIGO3	386724	hgsc.bcm.edu	36	3	49730837	49730837	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CAMKV	79012	hgsc.bcm.edu	36	3	49873432	49873432	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
IQCF1	132141	hgsc.bcm.edu	36	3	51904143	51904143	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
DNAH1	25981	hgsc.bcm.edu	36	3	52377817	52377817	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
BAP1	9223	hgsc.bcm.edu	36	3	52417116	52417116	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
DPPA2	151871	hgsc.bcm.edu	36	3	110509628	110509628	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ZBTB20	26137	hgsc.bcm.edu	36	3	115552580	115552580	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
POLQ	51426	hgsc.bcm.edu	36	3	122691384	122691384	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
FBXO40	51725	hgsc.bcm.edu	36	3	122822980	122822980	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
GOLGB1	2804	hgsc.bcm.edu	36	3	122893195	122893195	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
GATA2	2624	hgsc.bcm.edu	36	3	129687602	129687602	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TOPBP1	11073	hgsc.bcm.edu	36	3	134839454	134839454	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ECT2	1894	hgsc.bcm.edu	36	3	174016184	174016184	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ATP11B	23200	hgsc.bcm.edu	36	3	184085261	184085261	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
EIF2B5	8893	hgsc.bcm.edu	36	3	185343299	185343299	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
VWA5B2	90113	hgsc.bcm.edu	36	3	185441985	185441985	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CLCN2	1181	hgsc.bcm.edu	36	3	185547230	185547230	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MAP3K13	9175	hgsc.bcm.edu	36	3	186667363	186667363	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CHD4	1108	hgsc.bcm.edu	36	12	6575486	6575486	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PIK3C2G	5288	hgsc.bcm.edu	36	12	18465151	18465151	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
DDN	23109	hgsc.bcm.edu	36	12	47678142	47678142	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
KRT72	140807	hgsc.bcm.edu	36	12	51267750	51267750	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
KRT8	3856	hgsc.bcm.edu	36	12	51584966	51584966	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
OR6C75	390323	hgsc.bcm.edu	36	12	54045825	54045825	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PPFIA2	8499	hgsc.bcm.edu	36	12	80202168	80202168	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
APAF1	317	hgsc.bcm.edu	36	12	97567459	97567459	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SETD1B	23067	hgsc.bcm.edu	36	12	120736901	120736901	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
BCL7A	605	hgsc.bcm.edu	36	12	120977237	120977237	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
GANC	2595	hgsc.bcm.edu	36	15	40406888	40406888	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
LCMT2	9836	hgsc.bcm.edu	36	15	41409558	41409558	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ALDH1A2	8854	hgsc.bcm.edu	36	15	56093391	56093391	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
IDH2	3418	hgsc.bcm.edu	36	15	88432938	88432938	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
FURIN	5045	hgsc.bcm.edu	36	15	89224940	89224940	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
BMX	660	hgsc.bcm.edu	36	X	15465207	15465207	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
DMD	1756	hgsc.bcm.edu	36	X	31406170	31406170	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
EFHC2	80258	hgsc.bcm.edu	36	X	43986464	43986464	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
GLOD5	392465	hgsc.bcm.edu	36	X	48516745	48516745	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
DGKK	139189	hgsc.bcm.edu	36	X	50139451	50139451	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CXorf57	55086	hgsc.bcm.edu	36	X	105755134	105755134	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MORC4	79710	hgsc.bcm.edu	36	X	106072931	106072931	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
IRS4	8471	hgsc.bcm.edu	36	X	107862553	107862553	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
IRS4	8471	hgsc.bcm.edu	36	X	107866021	107866021	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ZBTB33	10009	hgsc.bcm.edu	36	X	119271897	119271897	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
KIT	3815	hgsc.bcm.edu	36	4	55294078	55294078	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TMPRSS11F	389208	hgsc.bcm.edu	36	4	68647323	68647323	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
AFF1	4299	hgsc.bcm.edu	36	4	88275854	88275854	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ADAM29	11086	hgsc.bcm.edu	36	4	176135488	176135488	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
APOB	338	hgsc.bcm.edu	36	2	21114419	21114419	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MFSD2B	0	hgsc.bcm.edu	36	2	24093893	24093893	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ALK	238	hgsc.bcm.edu	36	2	29794062	29794062	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
BIRC6	57448	hgsc.bcm.edu	36	2	32541830	32541830	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
LRPPRC	10128	hgsc.bcm.edu	36	2	44026843	44026843	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RHOQ	23433	hgsc.bcm.edu	36	2	46657221	46657221	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
LRRTM1	347730	hgsc.bcm.edu	36	2	80383704	80383704	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CREG2	200407	hgsc.bcm.edu	36	2	101333854	101333854	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
THSD7B	80731	hgsc.bcm.edu	36	2	137746702	137746702	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SCN1A	6323	hgsc.bcm.edu	36	2	166556279	166556279	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ABCB11	8647	hgsc.bcm.edu	36	2	169489473	169489473	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CHRNA1	1134	hgsc.bcm.edu	36	2	175327274	175327274	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PMS1	5378	hgsc.bcm.edu	36	2	190416992	190416992	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MSTN	2660	hgsc.bcm.edu	36	2	190630391	190630391	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
AOX1	316	hgsc.bcm.edu	36	2	201215769	201215769	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ERBB4	2066	hgsc.bcm.edu	36	2	212298057	212298057	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CXCR7	57007	hgsc.bcm.edu	36	2	237154599	237154599	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SNED1	25992	hgsc.bcm.edu	36	2	241622685	241622685	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
DOCK8	81704	hgsc.bcm.edu	36	9	318144	318144	+	Silent	SNP	G	G	A	rs35746964	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
JAK2	3717	hgsc.bcm.edu	36	9	5062610	5062610	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CNTLN	54875	hgsc.bcm.edu	36	9	17332381	17332381	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
C9orf144B	259308	hgsc.bcm.edu	36	9	34713291	34713291	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TDRD7	23424	hgsc.bcm.edu	36	9	99277565	99277565	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
BSPRY	54836	hgsc.bcm.edu	36	9	115172079	115172079	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
COL27A1	85301	hgsc.bcm.edu	36	9	116047993	116047993	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
COL27A1	85301	hgsc.bcm.edu	36	9	116106750	116106750	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
OR1J2	26740	hgsc.bcm.edu	36	9	124313083	124313083	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
NBEA	26960	hgsc.bcm.edu	36	13	34513292	34513292	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
NBEA	26960	hgsc.bcm.edu	36	13	34522521	34522521	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MED4	29079	hgsc.bcm.edu	36	13	47562501	47562501	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SPAG6	9576	hgsc.bcm.edu	36	10	22697458	22697458	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ITGB1	3688	hgsc.bcm.edu	36	10	33249241	33249241	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PTEN	5728	hgsc.bcm.edu	36	10	89682861	89682861	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PTEN	5728	hgsc.bcm.edu	36	10	89701900	89701900	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PTEN	5728	hgsc.bcm.edu	36	10	89710739	89710739	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
HELLS	3070	hgsc.bcm.edu	36	10	96323914	96323914	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
DMBT1	1755	hgsc.bcm.edu	36	10	124366751	124366751	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
KIAA0947	23379	hgsc.bcm.edu	36	5	5513575	5513575	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
DNAH5	1767	hgsc.bcm.edu	36	5	13954592	13954592	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
APC	324	hgsc.bcm.edu	36	5	112190790	112190790	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
IL3	3562	hgsc.bcm.edu	36	5	131426277	131426277	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PCDHA11	56138	hgsc.bcm.edu	36	5	140230151	140230151	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ITK	3702	hgsc.bcm.edu	36	5	156608549	156608549	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
HNRNPH1	3187	hgsc.bcm.edu	36	5	178977181	178977181	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
APOOL	139322	hgsc.bcm.edu	36	X	84145590	84145590	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
FAM78B	149297	hgsc.bcm.edu	36	1	164306195	164306196	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
WBP1	23559	hgsc.bcm.edu	36	2	74540917	74540918	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
ANKRD36B	57730	hgsc.bcm.edu	36	2	97489953	97489954	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944292	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
KCNH7	90134	hgsc.bcm.edu	36	2	162961695	162961695	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
PRKRA	8575	hgsc.bcm.edu	36	2	179023981	179023982	+	Frame_Shift_Del	DEL	GC	GC	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	GC	GC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
FAM171B	165215	hgsc.bcm.edu	36	2	187267292	187267293	+	In_Frame_Ins	INS	-	-	CAA	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
MUC4	4585	hgsc.bcm.edu	36	3	196990687	196990734	+	In_Frame_Del	DEL	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CRIPAK	285464	hgsc.bcm.edu	36	4	1378673	1378673	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
CRIPAK	285464	hgsc.bcm.edu	36	4	1378682	1378683	+	Frame_Shift_Ins	INS	-	-	CA	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
HLA-DQA1	3117	hgsc.bcm.edu	36	6	32717217	32717219	+	In_Frame_Del	DEL	GGT	GGT	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	GGT	GGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RP1L1	94137	hgsc.bcm.edu	36	8	10503414	10503434	+	In_Frame_Del	DEL	CTGGGCCTCCCCTTCAGCCTC	CTGGGCCTCCCCTTCAGCCTC	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	CTGGGCCTCCCCTTCAGCCTC	CTGGGCCTCCCCTTCAGCCTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RRS1	23212	hgsc.bcm.edu	36	8	67504884	67504916	+	In_Frame_Del	DEL	AAGAGGAAAGGGGGCCCGCCCAGCCAGGGAGGG	AAGAGGAAAGGGGGCCCGCCCAGCCAGGGAGGG	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	AAGAGGAAAGGGGGCCCGCCCAGCCAGGGAGGG	AAGAGGAAAGGGGGCCCGCCCAGCCAGGGAGGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
FREM1	158326	hgsc.bcm.edu	36	9	14798065	14798066	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
GPRIN2	9721	hgsc.bcm.edu	36	10	46419597	46419598	+	In_Frame_Ins	INS	-	-	ATGAGGGAG	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TFAM	7019	hgsc.bcm.edu	36	10	59818576	59818576	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
RIC8A	60626	hgsc.bcm.edu	36	11	199895	199897	+	In_Frame_Del	DEL	CCC	CCC	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	CCC	CCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
AMPD3	272	hgsc.bcm.edu	36	11	10456728	10456729	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
SYNM	23336	hgsc.bcm.edu	36	15	97463630	97463631	+	Frame_Shift_Ins	INS	-	-	G	rs60530833	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
TXNDC2	84203	hgsc.bcm.edu	36	18	9877389	9877433	+	In_Frame_Del	DEL	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA	GAAGCCATCCAGCCCAAGGAGGGTGACATCCCCAAGTCCCCAGAA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
GGT1	2678	hgsc.bcm.edu	36	22	23353869	23353869	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
NEFH	4744	hgsc.bcm.edu	36	22	28215567	28215568	+	In_Frame_Ins	INS	-	-	AAGTCCCCTGAGAAGGCC	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
P2RY10	27334	hgsc.bcm.edu	36	X	78103069	78103070	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6170-01A-11D-1650-10	TCGA-CM-6170-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	a71212d8-d787-44e8-bb9c-08ae7f5e1795	9e4901b4-2f9f-4233-9973-956aea90a036
