Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
RPA3	6119	hgsc.bcm.edu	36	7	7645249	7645249	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
C7orf16	10842	hgsc.bcm.edu	36	7	31703109	31703109	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
EGFR	1956	hgsc.bcm.edu	36	7	55216613	55216613	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SEMA3D	223117	hgsc.bcm.edu	36	7	84523008	84523008	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
C7orf64	84060	hgsc.bcm.edu	36	7	92002110	92002110	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SAMD9L	219285	hgsc.bcm.edu	36	7	92603060	92603060	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
LRRN3	54674	hgsc.bcm.edu	36	7	110550786	110550786	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ZNF277	11179	hgsc.bcm.edu	36	7	111723525	111723525	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
OR2A5	393046	hgsc.bcm.edu	36	7	143378728	143378728	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
VIPR2	7434	hgsc.bcm.edu	36	7	158522352	158522352	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MCM8	84515	hgsc.bcm.edu	36	20	5901798	5901798	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
FOXS1	2307	hgsc.bcm.edu	36	20	29896429	29896429	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ASXL1	171023	hgsc.bcm.edu	36	20	30486534	30486534	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
LPIN3	64900	hgsc.bcm.edu	36	20	39412216	39412216	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
WFDC10B	280664	hgsc.bcm.edu	36	20	43746984	43746984	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CDH26	60437	hgsc.bcm.edu	36	20	58004365	58004365	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
C20orf151	140893	hgsc.bcm.edu	36	20	60424625	60424625	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PRIC285	85441	hgsc.bcm.edu	36	20	61669400	61669400	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TTC28	23331	hgsc.bcm.edu	36	22	26708352	26708352	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TBC1D10A	83874	hgsc.bcm.edu	36	22	29020970	29020970	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
EP300	2033	hgsc.bcm.edu	36	22	39896425	39896425	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
LRP10	26020	hgsc.bcm.edu	36	14	22414701	22414701	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
G2E3	55632	hgsc.bcm.edu	36	14	30151243	30151243	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CGRRF1	10668	hgsc.bcm.edu	36	14	54059022	54059022	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ADAM20	8748	hgsc.bcm.edu	36	14	70059136	70059136	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PCNX	22990	hgsc.bcm.edu	36	14	70562596	70562596	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CATSPERB	79820	hgsc.bcm.edu	36	14	91229524	91229524	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KIAA1409	57578	hgsc.bcm.edu	36	14	93158271	93158271	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
AMH	268	hgsc.bcm.edu	36	19	2200500	2200500	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ZNF20	10168	hgsc.bcm.edu	36	19	12105189	12105189	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
NACC1	112939	hgsc.bcm.edu	36	19	13107286	13107286	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SLC5A5	6528	hgsc.bcm.edu	36	19	17862748	17862748	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MAG	4099	hgsc.bcm.edu	36	19	40492753	40492753	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
DEDD2	162989	hgsc.bcm.edu	36	19	47395668	47395668	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
LYPD5	284348	hgsc.bcm.edu	36	19	48998360	48998360	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ZNF528	84436	hgsc.bcm.edu	36	19	57611010	57611010	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
BRSK1	84446	hgsc.bcm.edu	36	19	60505999	60505999	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PRKDC	5591	hgsc.bcm.edu	36	8	48909313	48909313	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MOS	55034	hgsc.bcm.edu	36	8	57189001	57189001	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
FAM110B	90362	hgsc.bcm.edu	36	8	59221527	59221527	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CLVS1	0	hgsc.bcm.edu	36	8	62375167	62375167	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PREX2	80243	hgsc.bcm.edu	36	8	69182958	69182958	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TRPA1	8989	hgsc.bcm.edu	36	8	73097892	73097892	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MMP16	4325	hgsc.bcm.edu	36	8	89155970	89155970	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TMEM67	91147	hgsc.bcm.edu	36	8	94837224	94837224	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PTDSS1	9791	hgsc.bcm.edu	36	8	97411675	97411675	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
RNF19A	25897	hgsc.bcm.edu	36	8	101369045	101369045	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KCNV1	27012	hgsc.bcm.edu	36	8	111049504	111049504	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TRPS1	7227	hgsc.bcm.edu	36	8	116700610	116700610	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
EXT1	2131	hgsc.bcm.edu	36	8	119192054	119192054	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ENPP2	5168	hgsc.bcm.edu	36	8	120644295	120644295	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TG	7038	hgsc.bcm.edu	36	8	134004865	134004865	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KCNK9	51305	hgsc.bcm.edu	36	8	140784354	140784354	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SPATC1	375686	hgsc.bcm.edu	36	8	145173576	145173576	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CPSF3L	54973	hgsc.bcm.edu	36	1	1246250	1246250	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ACTRT2	140625	hgsc.bcm.edu	36	1	2929015	2929015	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SLC2A7	155184	hgsc.bcm.edu	36	1	9000926	9000926	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PTCHD2	57540	hgsc.bcm.edu	36	1	11485411	11485411	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ACTL8	81569	hgsc.bcm.edu	36	1	18025593	18025593	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
UBR4	23352	hgsc.bcm.edu	36	1	19356005	19356005	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
WASF2	10163	hgsc.bcm.edu	36	1	27617503	27617503	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
HOOK1	51361	hgsc.bcm.edu	36	1	60104172	60104172	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
LRRC40	55631	hgsc.bcm.edu	36	1	70423165	70423165	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SYDE2	84144	hgsc.bcm.edu	36	1	85420458	85420458	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ZNF644	84146	hgsc.bcm.edu	36	1	91179340	91179340	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CDC7	8317	hgsc.bcm.edu	36	1	91749762	91749762	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ADORA3	140	hgsc.bcm.edu	36	1	111847262	111847262	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MAGI3	260425	hgsc.bcm.edu	36	1	114016841	114016841	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
NBPF7	343505	hgsc.bcm.edu	36	1	120183350	120183350	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PDE4DIP	9659	hgsc.bcm.edu	36	1	143577953	143577953	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
HRNR	388697	hgsc.bcm.edu	36	1	150459840	150459840	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
DARC	2532	hgsc.bcm.edu	36	1	157442095	157442095	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CACNA1E	777	hgsc.bcm.edu	36	1	179955594	179955594	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PRG4	23572	hgsc.bcm.edu	36	1	184544631	184544631	+	Missense_Mutation	SNP	C	C	T	rs61729245	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TPR	7175	hgsc.bcm.edu	36	1	184569058	184569058	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CRB1	23418	hgsc.bcm.edu	36	1	195663385	195663385	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KIF14	9928	hgsc.bcm.edu	36	1	198791155	198791155	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ATP2B4	493	hgsc.bcm.edu	36	1	201975442	201975442	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TP53BP2	7159	hgsc.bcm.edu	36	1	222057719	222057719	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PARP1	142	hgsc.bcm.edu	36	1	224631529	224631529	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
RYR2	6262	hgsc.bcm.edu	36	1	235990895	235990895	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TFB2M	64216	hgsc.bcm.edu	36	1	244770988	244770988	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
OR2T6	254879	hgsc.bcm.edu	36	1	246618311	246618311	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
UBQLN3	50613	hgsc.bcm.edu	36	11	5486048	5486048	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
RBMXL2	27288	hgsc.bcm.edu	36	11	7067701	7067701	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
LRRC4C	57689	hgsc.bcm.edu	36	11	40093357	40093357	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ACCS	84680	hgsc.bcm.edu	36	11	44061361	44061361	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
OR8I2	120586	hgsc.bcm.edu	36	11	55618021	55618021	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
OR5B2	390190	hgsc.bcm.edu	36	11	57946568	57946568	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
OR4D11	219986	hgsc.bcm.edu	36	11	59027798	59027798	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TRPC6	7225	hgsc.bcm.edu	36	11	100848230	100848230	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CASP5	838	hgsc.bcm.edu	36	11	104378116	104378116	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CBL	867	hgsc.bcm.edu	36	11	118654587	118654587	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
OR10G8	219869	hgsc.bcm.edu	36	11	123406421	123406421	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
OPCML	4978	hgsc.bcm.edu	36	11	131812380	131812380	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
OR5V1	81696	hgsc.bcm.edu	36	6	29431066	29431066	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
HLA-G	3135	hgsc.bcm.edu	36	6	29904434	29904434	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CUL7	9820	hgsc.bcm.edu	36	6	43121024	43121024	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ZNF318	24149	hgsc.bcm.edu	36	6	43430616	43430616	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ENPP4	22875	hgsc.bcm.edu	36	6	46219245	46219245	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
EYS	346007	hgsc.bcm.edu	36	6	65358245	65358245	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PHIP	55023	hgsc.bcm.edu	36	6	79721272	79721272	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PDE10A	10846	hgsc.bcm.edu	36	6	165669673	165669673	+	Silent	SNP	G	G	A	rs35370607	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TP53	7157	hgsc.bcm.edu	36	17	7518264	7518264	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MYH1	4619	hgsc.bcm.edu	36	17	10340336	10340336	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CDRT1	374286	hgsc.bcm.edu	36	17	15438815	15438815	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SLC6A4	6532	hgsc.bcm.edu	36	17	25561724	25561724	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
GPR179	440435	hgsc.bcm.edu	36	17	33752584	33752584	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KRTAP1-3	81850	hgsc.bcm.edu	36	17	36444183	36444183	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
EFTUD2	9343	hgsc.bcm.edu	36	17	40292850	40292850	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
NSF	4905	hgsc.bcm.edu	36	17	42184079	42184079	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
C17orf57	124989	hgsc.bcm.edu	36	17	42802852	42802852	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
RECQL5	9400	hgsc.bcm.edu	36	17	71170386	71170386	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KRTAP24-1	643803	hgsc.bcm.edu	36	21	30576947	30576947	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
DSCR4	10281	hgsc.bcm.edu	36	21	38348852	38348852	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PDXK	8566	hgsc.bcm.edu	36	21	44000043	44000043	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CACNA1H	8912	hgsc.bcm.edu	36	16	1196105	1196105	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CACNA1H	8912	hgsc.bcm.edu	36	16	1201244	1201244	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SRL	6345	hgsc.bcm.edu	36	16	4182678	4182678	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
NUBP1	10101	hgsc.bcm.edu	36	16	10758122	10758122	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ZKSCAN2	342357	hgsc.bcm.edu	36	16	25165759	25165759	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ITGAL	3683	hgsc.bcm.edu	36	16	30432625	30432625	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
IRX6	79190	hgsc.bcm.edu	36	16	53919112	53919112	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CDH8	1006	hgsc.bcm.edu	36	16	60409033	60409033	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
NFATC1	4772	hgsc.bcm.edu	36	18	75271986	75271986	+	Silent	SNP	G	G	A	rs61731548	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
VHL	7428	hgsc.bcm.edu	36	3	10166591	10166591	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TATDN2	9797	hgsc.bcm.edu	36	3	10287131	10287131	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
RFTN1	23180	hgsc.bcm.edu	36	3	16333732	16333732	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SLC4A7	9497	hgsc.bcm.edu	36	3	27447845	27447845	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TGFBR2	7048	hgsc.bcm.edu	36	3	30661367	30661367	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MLH1	4292	hgsc.bcm.edu	36	3	37013159	37013159	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CTNNB1	1499	hgsc.bcm.edu	36	3	41241106	41241106	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CCR9	10803	hgsc.bcm.edu	36	3	45918253	45918253	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CDHR4	0	hgsc.bcm.edu	36	3	49806331	49806331	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
IQCF3	401067	hgsc.bcm.edu	36	3	51839526	51839526	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ABHD6	57406	hgsc.bcm.edu	36	3	58246189	58246189	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CADPS	8618	hgsc.bcm.edu	36	3	62439088	62439088	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SNTN	132203	hgsc.bcm.edu	36	3	63624747	63624747	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KIAA1407	57577	hgsc.bcm.edu	36	3	115236543	115236543	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
COL6A5	256076	hgsc.bcm.edu	36	3	131642327	131642327	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SLITRK3	22865	hgsc.bcm.edu	36	3	166388411	166388411	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PIK3CA	5290	hgsc.bcm.edu	36	3	180434606	180434606	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PIK3CA	5290	hgsc.bcm.edu	36	3	180434672	180434672	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PIK3CA	5290	hgsc.bcm.edu	36	3	180434754	180434754	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
FXR1	8087	hgsc.bcm.edu	36	3	182161981	182161981	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
VWF	7450	hgsc.bcm.edu	36	12	5929292	5929292	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SLC2A3	6515	hgsc.bcm.edu	36	12	7966868	7966868	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
C12orf40	283461	hgsc.bcm.edu	36	12	38401072	38401072	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PDZRN4	29951	hgsc.bcm.edu	36	12	40252754	40252754	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
GLS2	27165	hgsc.bcm.edu	36	12	55151827	55151827	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
GLI1	2735	hgsc.bcm.edu	36	12	56152072	56152072	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
BBS10	79738	hgsc.bcm.edu	36	12	75264523	75264523	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PTPN11	5781	hgsc.bcm.edu	36	12	111411271	111411271	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
OR4N4	283694	hgsc.bcm.edu	36	15	19884234	19884234	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
RYR3	6263	hgsc.bcm.edu	36	15	31728643	31728643	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PLA2G4D	283748	hgsc.bcm.edu	36	15	40150259	40150259	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MESDC2	23184	hgsc.bcm.edu	36	15	79061382	79061382	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MXRA5	25878	hgsc.bcm.edu	36	X	3251452	3251452	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
NLGN4X	57502	hgsc.bcm.edu	36	X	5831285	5831285	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ARHGAP6	395	hgsc.bcm.edu	36	X	11182675	11182675	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
DMD	1756	hgsc.bcm.edu	36	X	31406188	31406188	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
DDX3X	1654	hgsc.bcm.edu	36	X	41088453	41088453	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KDM6A	7403	hgsc.bcm.edu	36	X	44822686	44822686	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
FAAH2	158584	hgsc.bcm.edu	36	X	57374785	57374785	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TAF1	6872	hgsc.bcm.edu	36	X	70544592	70544592	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
NXF5	55998	hgsc.bcm.edu	36	X	100983394	100983394	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PAK3	8874	hgsc.bcm.edu	36	X	110277757	110277757	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
FGFR3	2261	hgsc.bcm.edu	36	4	1773367	1773367	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CRMP1	1400	hgsc.bcm.edu	36	4	5892262	5892262	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ANAPC4	29945	hgsc.bcm.edu	36	4	25026253	25026253	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
FRYL	285527	hgsc.bcm.edu	36	4	48254367	48254367	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CEP135	9662	hgsc.bcm.edu	36	4	56572876	56572876	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
EPHA5	2044	hgsc.bcm.edu	36	4	65952781	65952781	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
FAT4	79633	hgsc.bcm.edu	36	4	126547621	126547621	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
FAT4	79633	hgsc.bcm.edu	36	4	126549083	126549083	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TTC29	83894	hgsc.bcm.edu	36	4	148049773	148049773	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
FBXW7	55294	hgsc.bcm.edu	36	4	153468915	153468915	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TLL1	7092	hgsc.bcm.edu	36	4	167218606	167218606	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
HMGB2	3148	hgsc.bcm.edu	36	4	174490840	174490840	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
GLRA3	8001	hgsc.bcm.edu	36	4	175946608	175946608	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ZNF513	130557	hgsc.bcm.edu	36	2	27455102	27455102	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
GTF2A1L	11036	hgsc.bcm.edu	36	2	48727392	48727392	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
NRXN1	9378	hgsc.bcm.edu	36	2	50002598	50002598	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MDH1	4190	hgsc.bcm.edu	36	2	63679887	63679887	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
VWA3B	200403	hgsc.bcm.edu	36	2	98102427	98102427	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PSD4	23550	hgsc.bcm.edu	36	2	113666581	113666581	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
RAB6C	84084	hgsc.bcm.edu	36	2	130454188	130454188	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SLC4A10	57282	hgsc.bcm.edu	36	2	162521984	162521984	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SCN2A	6326	hgsc.bcm.edu	36	2	165878419	165878419	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TTC21B	79809	hgsc.bcm.edu	36	2	166505813	166505813	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MYO3B	140469	hgsc.bcm.edu	36	2	170946835	170946835	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
GTF3C3	9330	hgsc.bcm.edu	36	2	197349569	197349569	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
BMPR2	659	hgsc.bcm.edu	36	2	203128906	203128906	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MAP2	10988	hgsc.bcm.edu	36	2	210226240	210226240	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
UNC80	285175	hgsc.bcm.edu	36	2	210546208	210546208	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SP110	3431	hgsc.bcm.edu	36	2	230789865	230789865	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
COL6A3	1293	hgsc.bcm.edu	36	2	237918044	237918044	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
THAP4	51078	hgsc.bcm.edu	36	2	242190007	242190007	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
DOCK8	81704	hgsc.bcm.edu	36	9	396980	396980	+	Silent	SNP	C	C	T	rs34621129	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
IFNA13	3447	hgsc.bcm.edu	36	9	21357971	21357971	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ELAVL2	1993	hgsc.bcm.edu	36	9	23682567	23682567	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
DNAI1	27019	hgsc.bcm.edu	36	9	34504719	34504719	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
APBA1	320	hgsc.bcm.edu	36	9	71272691	71272691	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
GDA	9615	hgsc.bcm.edu	36	9	74030436	74030436	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
RASEF	158158	hgsc.bcm.edu	36	9	84810215	84810215	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PTCH1	5727	hgsc.bcm.edu	36	9	97287969	97287969	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
OR1L1	26737	hgsc.bcm.edu	36	9	124464064	124464064	+	Silent	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MAB21L1	4081	hgsc.bcm.edu	36	13	34947847	34947847	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
RB1	5925	hgsc.bcm.edu	36	13	47931845	47931845	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CYSLTR2	57105	hgsc.bcm.edu	36	13	48179934	48179934	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SLAIN1	122060	hgsc.bcm.edu	36	13	77233212	77233212	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CUL4A	8451	hgsc.bcm.edu	36	13	112957024	112957024	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ITIH2	3698	hgsc.bcm.edu	36	10	7803682	7803682	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
SPAG6	9576	hgsc.bcm.edu	36	10	22674749	22674749	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KIAA1217	56243	hgsc.bcm.edu	36	10	24802216	24802216	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
A1CF	29974	hgsc.bcm.edu	36	10	52245936	52245936	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
MYPN	84665	hgsc.bcm.edu	36	10	69625244	69625244	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KIAA1279	26128	hgsc.bcm.edu	36	10	70418782	70418782	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PTEN	5728	hgsc.bcm.edu	36	10	89643838	89643838	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PTEN	5728	hgsc.bcm.edu	36	10	89707698	89707698	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
HELLS	3070	hgsc.bcm.edu	36	10	96331228	96331228	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ADD3	120	hgsc.bcm.edu	36	10	111850537	111850537	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
DCLRE1A	9937	hgsc.bcm.edu	36	10	115595521	115595521	+	Missense_Mutation	SNP	T	T	C	rs35884667	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
FBXL7	23194	hgsc.bcm.edu	36	5	15989617	15989617	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CDH18	1016	hgsc.bcm.edu	36	5	19519331	19519331	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
APC	324	hgsc.bcm.edu	36	5	112192515	112192515	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
APC	324	hgsc.bcm.edu	36	5	112203379	112203379	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KDM3B	51780	hgsc.bcm.edu	36	5	137736317	137736317	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
PCDHGA4	56111	hgsc.bcm.edu	36	5	140715933	140715933	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
HRH2	3274	hgsc.bcm.edu	36	5	175043081	175043081	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ISYNA1	51477	hgsc.bcm.edu	36	19	18407841	18407841	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
CASC1	55259	hgsc.bcm.edu	36	12	25191306	25191306	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
TCHH	7062	hgsc.bcm.edu	36	1	150350799	150350800	+	In_Frame_Ins	INS	-	-	TGCTGCTCGCGCCTCTCC	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
ACAD11	84129	hgsc.bcm.edu	36	3	133846398	133846416	+	Frame_Shift_Del	DEL	TGGAGATAAAAGGTTGGAT	TGGAGATAAAAGGTTGGAT	-	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	TGGAGATAAAAGGTTGGAT	TGGAGATAAAAGGTTGGAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KIAA0408	9729	hgsc.bcm.edu	36	6	127812944	127812945	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KRTAP5-4	387267	hgsc.bcm.edu	36	11	1599823	1599843	+	In_Frame_Del	DEL	GAGCCACAGCCCCCACAGCCG	GAGCCACAGCCCCCACAGCCG	-	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	GAGCCACAGCCCCCACAGCCG	GAGCCACAGCCCCCACAGCCG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
C17orf97	400566	hgsc.bcm.edu	36	17	263602	263631	+	Frame_Shift_Del	DEL	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	-	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	AACCCCGAGGCCCTCAAGGGCTTCCACCCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
KRTAP9-2	83899	hgsc.bcm.edu	36	17	36636849	36636860	+	In_Frame_Del	DEL	CTGCTGCCAGCC	CTGCTGCCAGCC	-	novel	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	CTGCTGCCAGCC	CTGCTGCCAGCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
RBM38	55544	hgsc.bcm.edu	36	20	55400099	55400100	+	Frame_Shift_Ins	INS	-	-	C	rs11481309	unknown	TCGA-CM-6676-01A-11D-1835-10	TCGA-CM-6676-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	30f75e15-c17e-4ad4-a6c4-7f67f5bfe696	e85e9714-dc09-40d3-8e47-1d6f0dc05435
