Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
RADIL	55698	hgsc.bcm.edu	36	7	4822520	4822520	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ETV1	2115	hgsc.bcm.edu	36	7	13937789	13937789	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MPP6	51678	hgsc.bcm.edu	36	7	24669780	24669780	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CHN2	1124	hgsc.bcm.edu	36	7	29486419	29486419	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TXNDC3	51314	hgsc.bcm.edu	36	7	37868263	37868263	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
POU6F2	11281	hgsc.bcm.edu	36	7	39213616	39213616	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
EGFR	1956	hgsc.bcm.edu	36	7	55178573	55178573	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CALN1	83698	hgsc.bcm.edu	36	7	71126621	71126621	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PIK3CG	5294	hgsc.bcm.edu	36	7	106332911	106332911	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
LAMB1	3912	hgsc.bcm.edu	36	7	107353950	107353950	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
C7orf66	154907	hgsc.bcm.edu	36	7	108311794	108311794	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GRM8	2918	hgsc.bcm.edu	36	7	126670305	126670305	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CPA5	93979	hgsc.bcm.edu	36	7	129777088	129777088	+	Missense_Mutation	SNP	C	C	T	rs17388190	byCluster;byFrequency;byHapMap	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TRPV5	56302	hgsc.bcm.edu	36	7	142332792	142332792	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SIRPA	140885	hgsc.bcm.edu	36	20	1850267	1850267	+	Silent	SNP	C	C	T	rs62641731	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TMC2	117532	hgsc.bcm.edu	36	20	2487196	2487196	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TMC2	117532	hgsc.bcm.edu	36	20	2487228	2487228	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GDF5	8200	hgsc.bcm.edu	36	20	33485881	33485881	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
DLGAP4	22839	hgsc.bcm.edu	36	20	34493838	34493838	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
BPI	671	hgsc.bcm.edu	36	20	36385724	36385724	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CDH22	64405	hgsc.bcm.edu	36	20	44289555	44289555	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
AURKA	6790	hgsc.bcm.edu	36	20	54391550	54391550	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MYT1	9088	hgsc.bcm.edu	36	20	62307514	62307514	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SLC2A11	66035	hgsc.bcm.edu	36	22	22549285	22549285	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TTLL1	25809	hgsc.bcm.edu	36	22	41772436	41772436	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
OR4L1	122742	hgsc.bcm.edu	36	14	19598094	19598094	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PPP4R4	57718	hgsc.bcm.edu	36	14	93781698	93781698	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PTPRS	5802	hgsc.bcm.edu	36	19	5165665	5165665	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MAP2K7	5609	hgsc.bcm.edu	36	19	7881165	7881165	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ZNF492	57615	hgsc.bcm.edu	36	19	22638452	22638452	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
IL4I1	259307	hgsc.bcm.edu	36	19	55085148	55085148	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ZNF468	388561	hgsc.bcm.edu	36	19	58037109	58037109	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
NLRP8	126205	hgsc.bcm.edu	36	19	61151158	61151158	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ZNF471	57573	hgsc.bcm.edu	36	19	61719517	61719517	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PEG3	5178	hgsc.bcm.edu	36	19	62017243	62017243	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
A1BG	1	hgsc.bcm.edu	36	19	63553591	63553591	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ZFHX4	79776	hgsc.bcm.edu	36	8	77938258	77938258	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
HEY1	23462	hgsc.bcm.edu	36	8	80840178	80840178	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
C1orf86	199990	hgsc.bcm.edu	36	1	2111009	2111009	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
RHD	6007	hgsc.bcm.edu	36	1	25483812	25483812	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ARID1A	8289	hgsc.bcm.edu	36	1	26928832	26928832	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
EPB41	2035	hgsc.bcm.edu	36	1	29196370	29196370	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MATN1	4146	hgsc.bcm.edu	36	1	30961461	30961461	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
YBX1	4904	hgsc.bcm.edu	36	1	42934992	42934992	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ORC1	10166	hgsc.bcm.edu	36	1	52639660	52639660	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CCDC18	343099	hgsc.bcm.edu	36	1	93453032	93453032	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GCLM	2730	hgsc.bcm.edu	36	1	94134881	94134881	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
VAV3	10451	hgsc.bcm.edu	36	1	108114815	108114815	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GSTM5	2949	hgsc.bcm.edu	36	1	110059278	110059278	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GSTM5	2949	hgsc.bcm.edu	36	1	110059354	110059354	+	Missense_Mutation	SNP	T	T	C	rs2227963	byFrequency	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
C1orf103	55791	hgsc.bcm.edu	36	1	111292267	111292267	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CTTNBP2NL	55917	hgsc.bcm.edu	36	1	112801469	112801469	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SLC22A15	55356	hgsc.bcm.edu	36	1	116363746	116363746	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
C1orf51	148523	hgsc.bcm.edu	36	1	148525593	148525593	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
NUP210L	91181	hgsc.bcm.edu	36	1	152334135	152334135	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MUC1	4582	hgsc.bcm.edu	36	1	153428683	153428683	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
KIRREL	55243	hgsc.bcm.edu	36	1	156326226	156326226	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ARHGAP30	257106	hgsc.bcm.edu	36	1	159285104	159285104	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
DCAF6	0	hgsc.bcm.edu	36	1	166280987	166280987	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SELP	6414	hgsc.bcm.edu	36	1	167838941	167838941	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CEP350	9857	hgsc.bcm.edu	36	1	178272767	178272767	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CDC73	79577	hgsc.bcm.edu	36	1	191386069	191386069	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
KDM5B	10765	hgsc.bcm.edu	36	1	200965651	200965651	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TLR5	7100	hgsc.bcm.edu	36	1	221352241	221352241	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
KMO	8564	hgsc.bcm.edu	36	1	239798428	239798428	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
OR51E2	81285	hgsc.bcm.edu	36	11	4659803	4659803	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
DNHD1	144132	hgsc.bcm.edu	36	11	6476305	6476305	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
OR4A16	81327	hgsc.bcm.edu	36	11	54867820	54867820	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
OR5M3	219482	hgsc.bcm.edu	36	11	55994129	55994129	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GLYAT	10249	hgsc.bcm.edu	36	11	58234111	58234111	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
INCENP	3619	hgsc.bcm.edu	36	11	61653926	61653926	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
RPS6KA4	8986	hgsc.bcm.edu	36	11	63893614	63893614	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
DPF2	5977	hgsc.bcm.edu	36	11	64865045	64865045	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CORO1B	57175	hgsc.bcm.edu	36	11	66962830	66962830	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MRE11A	4361	hgsc.bcm.edu	36	11	93843398	93843398	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ATM	472	hgsc.bcm.edu	36	11	107683872	107683872	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
HSPA8	3312	hgsc.bcm.edu	36	11	122435693	122435693	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ST3GAL4	6484	hgsc.bcm.edu	36	11	125782073	125782073	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
OR12D2	26529	hgsc.bcm.edu	36	6	29472538	29472538	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
KLC4	89953	hgsc.bcm.edu	36	6	43147300	43147300	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CYB5R4	51167	hgsc.bcm.edu	36	6	84702720	84702720	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SIM1	6492	hgsc.bcm.edu	36	6	100945523	100945523	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SERINC1	57515	hgsc.bcm.edu	36	6	122819460	122819460	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ZNF594	84622	hgsc.bcm.edu	36	17	5027027	5027027	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TP53	7157	hgsc.bcm.edu	36	17	7517819	7517819	+	Missense_Mutation	SNP	G	G	A	rs28934574	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SGK494	124923	hgsc.bcm.edu	36	17	23962914	23962914	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
NF1	4763	hgsc.bcm.edu	36	17	26616416	26616416	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GGNBP2	79893	hgsc.bcm.edu	36	17	32017634	32017634	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
KRT35	3886	hgsc.bcm.edu	36	17	36890466	36890466	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SLC4A1	6521	hgsc.bcm.edu	36	17	39691024	39691024	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PRKAR1A	5573	hgsc.bcm.edu	36	17	64023198	64023198	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
UBE2O	63893	hgsc.bcm.edu	36	17	71904261	71904261	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CXADR	1525	hgsc.bcm.edu	36	21	17846071	17846071	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SH3BGR	6451	hgsc.bcm.edu	36	21	39756293	39756293	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
UMOD	7369	hgsc.bcm.edu	36	16	20267939	20267939	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CYLD	1540	hgsc.bcm.edu	36	16	49345789	49345789	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TEPP	374739	hgsc.bcm.edu	36	16	56576624	56576624	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GINS3	64785	hgsc.bcm.edu	36	16	56995991	56995991	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ZNF23	7571	hgsc.bcm.edu	36	16	70040833	70040833	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
LRRC50	123872	hgsc.bcm.edu	36	16	82745724	82745724	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ANKRD11	29123	hgsc.bcm.edu	36	16	87873107	87873107	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MYOM1	8736	hgsc.bcm.edu	36	18	3178882	3178882	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
FBLN2	2199	hgsc.bcm.edu	36	3	13654167	13654167	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CLASP2	23122	hgsc.bcm.edu	36	3	33700904	33700904	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MLH1	4292	hgsc.bcm.edu	36	3	37017545	37017545	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SCN10A	6336	hgsc.bcm.edu	36	3	38768980	38768980	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SETD2	29072	hgsc.bcm.edu	36	3	47114494	47114494	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CACNA2D3	55799	hgsc.bcm.edu	36	3	54579045	54579045	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PDHB	5162	hgsc.bcm.edu	36	3	58389326	58389326	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ARGFX	503582	hgsc.bcm.edu	36	3	122787577	122787577	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MED12L	116931	hgsc.bcm.edu	36	3	152577319	152577319	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ACAP2	23527	hgsc.bcm.edu	36	3	196497866	196497866	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
KIAA0226	9711	hgsc.bcm.edu	36	3	198886405	198886405	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
WNK1	65125	hgsc.bcm.edu	36	12	848005	848005	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
LRRC23	10233	hgsc.bcm.edu	36	12	6885110	6885110	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
HSD17B6	8630	hgsc.bcm.edu	36	12	55454102	55454102	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TMPO	7112	hgsc.bcm.edu	36	12	97445895	97445895	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
UHRF1BP1L	23074	hgsc.bcm.edu	36	12	99006964	99006964	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MAGEL2	54551	hgsc.bcm.edu	36	15	21440733	21440733	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SHC4	399694	hgsc.bcm.edu	36	15	46905526	46905526	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MYO1E	4643	hgsc.bcm.edu	36	15	57311219	57311219	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
DMD	1756	hgsc.bcm.edu	36	X	32400214	32400214	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
FAM47A	158724	hgsc.bcm.edu	36	X	34058815	34058815	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MAOB	4129	hgsc.bcm.edu	36	X	43537718	43537718	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
OTUD5	55593	hgsc.bcm.edu	36	X	48699735	48699735	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CLCN5	1184	hgsc.bcm.edu	36	X	49737919	49737919	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
HUWE1	10075	hgsc.bcm.edu	36	X	53587584	53587584	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TEX11	56159	hgsc.bcm.edu	36	X	69666485	69666485	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
NONO	4841	hgsc.bcm.edu	36	X	70433446	70433446	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
KIAA2022	340533	hgsc.bcm.edu	36	X	73880520	73880520	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
FAM133A	286499	hgsc.bcm.edu	36	X	92851235	92851235	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CAPN6	827	hgsc.bcm.edu	36	X	110380885	110380885	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ODZ1	10178	hgsc.bcm.edu	36	X	123613594	123613594	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TFDP3	51270	hgsc.bcm.edu	36	X	132179135	132179135	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
VGLL1	51442	hgsc.bcm.edu	36	X	135458511	135458511	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PLXNB3	5365	hgsc.bcm.edu	36	X	152688467	152688467	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
F8	2157	hgsc.bcm.edu	36	X	153810114	153810114	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CLNK	116449	hgsc.bcm.edu	36	4	10124311	10124311	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CWH43	0	hgsc.bcm.edu	36	4	48700604	48700604	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SPATA18	132671	hgsc.bcm.edu	36	4	52630789	52630789	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
KDR	3791	hgsc.bcm.edu	36	4	55667719	55667719	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
AFF1	4299	hgsc.bcm.edu	36	4	88275855	88275855	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CENPE	1062	hgsc.bcm.edu	36	4	104286561	104286561	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
FABP2	2169	hgsc.bcm.edu	36	4	120460176	120460176	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
QRFPR	84109	hgsc.bcm.edu	36	4	122521090	122521090	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
FBXW7	55294	hgsc.bcm.edu	36	4	153552113	153552113	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
DCHS2	54798	hgsc.bcm.edu	36	4	155438810	155438810	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
DDX60	55601	hgsc.bcm.edu	36	4	169433165	169433165	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CPSF3	51692	hgsc.bcm.edu	36	2	9517144	9517144	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GREB1	9687	hgsc.bcm.edu	36	2	11635940	11635940	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
BRE	9577	hgsc.bcm.edu	36	2	27970988	27970988	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CLIP4	79745	hgsc.bcm.edu	36	2	29233607	29233607	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
C2orf29	55571	hgsc.bcm.edu	36	2	101240750	101240750	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
IL1RL1	9173	hgsc.bcm.edu	36	2	102326218	102326218	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TSN	7247	hgsc.bcm.edu	36	2	122232814	122232814	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
LCT	3938	hgsc.bcm.edu	36	2	136310738	136310738	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ACVR2A	92	hgsc.bcm.edu	36	2	148397133	148397133	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
RIF1	55791	hgsc.bcm.edu	36	2	152029632	152029632	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SCN3A	6328	hgsc.bcm.edu	36	2	165720557	165720557	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
LRP2	4036	hgsc.bcm.edu	36	2	169771579	169771579	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TTN	7273	hgsc.bcm.edu	36	2	179142497	179142497	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
STAT1	6772	hgsc.bcm.edu	36	2	191555463	191555463	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
IDH1	3417	hgsc.bcm.edu	36	2	208821453	208821453	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MAP2	10988	hgsc.bcm.edu	36	2	210226220	210226220	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
VWC2L	402117	hgsc.bcm.edu	36	2	214987519	214987519	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ABCA12	26154	hgsc.bcm.edu	36	2	215598697	215598697	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
FN1	2335	hgsc.bcm.edu	36	2	215998210	215998210	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ECEL1	9427	hgsc.bcm.edu	36	2	233059037	233059037	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
UGT1A8	54576	hgsc.bcm.edu	36	2	234191324	234191324	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
FREM1	158326	hgsc.bcm.edu	36	9	14738511	14738511	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ELAVL2	1993	hgsc.bcm.edu	36	9	23682599	23682599	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TAF1L	138474	hgsc.bcm.edu	36	9	32625568	32625568	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CCIN	881	hgsc.bcm.edu	36	9	36159589	36159589	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ZNF782	158431	hgsc.bcm.edu	36	9	98647099	98647099	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
RNF20	56254	hgsc.bcm.edu	36	9	103353874	103353874	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
OR1N2	138882	hgsc.bcm.edu	36	9	124355289	124355289	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
BRCA2	675	hgsc.bcm.edu	36	13	31811536	31811536	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
EXOSC8	11340	hgsc.bcm.edu	36	13	36480284	36480284	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TSC22D1	8848	hgsc.bcm.edu	36	13	44046291	44046291	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
EDNRB	1910	hgsc.bcm.edu	36	13	77390521	77390521	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
LIG4	3981	hgsc.bcm.edu	36	13	107659576	107659576	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
BEND7	222389	hgsc.bcm.edu	36	10	13563029	13563029	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MYST4	23522	hgsc.bcm.edu	36	10	76451914	76451914	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PTEN	5728	hgsc.bcm.edu	36	10	89710688	89710688	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PTEN	5728	hgsc.bcm.edu	36	10	89715141	89715141	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
LCOR	84458	hgsc.bcm.edu	36	10	98705226	98705226	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GOT1	127845	hgsc.bcm.edu	36	10	101152397	101152397	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CHUK	1147	hgsc.bcm.edu	36	10	101943099	101943099	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
C10orf96	374355	hgsc.bcm.edu	36	10	118090260	118090260	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
DHX32	55760	hgsc.bcm.edu	36	10	127538385	127538385	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
BRD9	65980	hgsc.bcm.edu	36	5	944401	944401	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MYO10	4651	hgsc.bcm.edu	36	5	16847812	16847812	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ERBB2IP	55914	hgsc.bcm.edu	36	5	65378013	65378013	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
F2RL1	2150	hgsc.bcm.edu	36	5	76164864	76164864	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
FAM172A	83989	hgsc.bcm.edu	36	5	93243038	93243038	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
MCTP1	79772	hgsc.bcm.edu	36	5	94279428	94279428	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
APC	324	hgsc.bcm.edu	36	5	112198677	112198677	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
APC	324	hgsc.bcm.edu	36	5	112203515	112203515	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
TRIM36	55521	hgsc.bcm.edu	36	5	114510804	114510804	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PHAX	51808	hgsc.bcm.edu	36	5	125988236	125988236	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PCDHGA2	56113	hgsc.bcm.edu	36	5	140699438	140699438	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PCDHGB2	56103	hgsc.bcm.edu	36	5	140721156	140721156	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PCDHGB2	56103	hgsc.bcm.edu	36	5	140721914	140721914	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
PCDHGA11	56105	hgsc.bcm.edu	36	5	140781052	140781052	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
JAKMIP2	9832	hgsc.bcm.edu	36	5	146992483	146992483	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GRIA1	2890	hgsc.bcm.edu	36	5	153170809	153170809	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
FAM114A2	10827	hgsc.bcm.edu	36	5	153394081	153394081	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
GABRG2	2566	hgsc.bcm.edu	36	5	161457267	161457267	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ODZ2	57451	hgsc.bcm.edu	36	5	167450172	167450172	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ERGIC1	57222	hgsc.bcm.edu	36	5	172256653	172256653	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ZCCHC17	51538	hgsc.bcm.edu	36	1	31609592	31609594	+	In_Frame_Del	DEL	AAG	AAG	-	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	AAG	AAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
WDR63	126820	hgsc.bcm.edu	36	1	85368324	85368324	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
EPC2	26122	hgsc.bcm.edu	36	2	149259041	149259042	+	Frame_Shift_Del	DEL	GT	GT	-	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	GT	GT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
APC	324	hgsc.bcm.edu	36	5	112203926	112203929	+	Frame_Shift_Del	DEL	TTAT	TTAT	-	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	TTAT	TTAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
KIAA1958	158405	hgsc.bcm.edu	36	9	114461562	114461568	+	Frame_Shift_Del	DEL	TGGGTGC	TGGGTGC	-	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	TGGGTGC	TGGGTGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
NDUFB8	4714	hgsc.bcm.edu	36	10	102279182	102279183	+	In_Frame_Ins	INS	-	-	GGC	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
ESRRA	2101	hgsc.bcm.edu	36	11	63839872	63839874	+	In_Frame_Del	DEL	GGG	GGG	-	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	GGG	GGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
LRRC23	10233	hgsc.bcm.edu	36	12	6885110	6885113	+	Frame_Shift_Del	DEL	GAGA	GAGA	-	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	GAGA	GAGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
XRCC3	7517	hgsc.bcm.edu	36	14	103243270	103243271	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
SOX9	6662	hgsc.bcm.edu	36	17	67631375	67631376	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
CDH26	60437	hgsc.bcm.edu	36	20	58021179	58021179	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
FAM123B	139285	hgsc.bcm.edu	36	X	63328953	63328953	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6677-01A-11D-1835-10	TCGA-CM-6677-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3e565557-01f6-4bab-9240-cb0271174104	25534ac2-1310-4e1c-932d-1c32b2f36259
