Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
RELN	5649	hgsc.bcm.edu	36	7	102900522	102900522	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
RELN	5649	hgsc.bcm.edu	36	7	103001849	103001849	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
NUP205	23165	hgsc.bcm.edu	36	7	134936246	134936246	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
PROKR2	128674	hgsc.bcm.edu	36	20	5242762	5242762	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
NCOA6	23054	hgsc.bcm.edu	36	20	32794543	32794543	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
RBL1	5933	hgsc.bcm.edu	36	20	35102008	35102008	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
MC3R	4159	hgsc.bcm.edu	36	20	54257503	54257503	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
UPB1	51733	hgsc.bcm.edu	36	22	23249596	23249596	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
POTEG	404785	hgsc.bcm.edu	36	14	18623824	18623824	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
VAV1	7409	hgsc.bcm.edu	36	19	6773292	6773292	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ZNF699	374879	hgsc.bcm.edu	36	19	9267201	9267201	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
KIR2DL1	3802	hgsc.bcm.edu	36	19	59986955	59986955	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
CHD7	55636	hgsc.bcm.edu	36	8	61905586	61905586	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ZFHX4	79776	hgsc.bcm.edu	36	8	77929002	77929002	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
PTDSS1	9791	hgsc.bcm.edu	36	8	97411675	97411675	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
MTDH	92140	hgsc.bcm.edu	36	8	98800512	98800512	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
UBR5	51366	hgsc.bcm.edu	36	8	103385498	103385498	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
TAS1R3	83756	hgsc.bcm.edu	36	1	1258840	1258840	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ARID1A	8289	hgsc.bcm.edu	36	1	26928832	26928832	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
GRIK3	2899	hgsc.bcm.edu	36	1	37044371	37044371	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
HIVEP3	59269	hgsc.bcm.edu	36	1	41822953	41822953	+	Missense_Mutation	SNP	C	C	T	rs2146315	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
NEXN	91624	hgsc.bcm.edu	36	1	78155936	78155936	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
OVGP1	5016	hgsc.bcm.edu	36	1	111759163	111759163	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
SPAG17	200162	hgsc.bcm.edu	36	1	118360168	118360168	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
FLG	2312	hgsc.bcm.edu	36	1	150552759	150552759	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
LCE5A	254910	hgsc.bcm.edu	36	1	150750858	150750858	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
TNR	7143	hgsc.bcm.edu	36	1	173598497	173598497	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
HMCN1	83872	hgsc.bcm.edu	36	1	184310530	184310530	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
SYT14	255928	hgsc.bcm.edu	36	1	208395700	208395700	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
KCNK1	3775	hgsc.bcm.edu	36	1	231816778	231816778	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
TRIM3	10612	hgsc.bcm.edu	36	11	6426862	6426862	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
PTPN5	84867	hgsc.bcm.edu	36	11	18718735	18718735	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
SPRYD5	84767	hgsc.bcm.edu	36	11	55409617	55409617	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
MAML2	84441	hgsc.bcm.edu	36	11	95352084	95352084	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ATM	472	hgsc.bcm.edu	36	11	107627784	107627784	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ATM	472	hgsc.bcm.edu	36	11	107647253	107647253	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ATM	472	hgsc.bcm.edu	36	11	107723301	107723301	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
C11orf63	79864	hgsc.bcm.edu	36	11	122335313	122335313	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ETS1	2113	hgsc.bcm.edu	36	11	127860011	127860011	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
GPLD1	2822	hgsc.bcm.edu	36	6	24544887	24544887	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
GPLD1	2822	hgsc.bcm.edu	36	6	24570970	24570970	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
OR11A1	26531	hgsc.bcm.edu	36	6	29503201	29503201	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ZBTB24	9841	hgsc.bcm.edu	36	6	109903333	109903333	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
KIAA0408	9729	hgsc.bcm.edu	36	6	127813009	127813009	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
SYNE1	23345	hgsc.bcm.edu	36	6	152518742	152518742	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
SYNE1	23345	hgsc.bcm.edu	36	6	152693661	152693661	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
KRT23	25984	hgsc.bcm.edu	36	17	36335146	36335146	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
RSAD1	55316	hgsc.bcm.edu	36	17	45914532	45914532	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
C17orf71	55181	hgsc.bcm.edu	36	17	54643303	54643303	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
SDK2	54549	hgsc.bcm.edu	36	17	68931242	68931242	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
GPRC5C	55890	hgsc.bcm.edu	36	17	69948219	69948219	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
CSNK1D	1453	hgsc.bcm.edu	36	17	77802594	77802594	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
TIAM1	7074	hgsc.bcm.edu	36	21	31418728	31418728	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
BACE2	25825	hgsc.bcm.edu	36	21	41569285	41569285	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
COL6A2	1292	hgsc.bcm.edu	36	21	46376425	46376425	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
PRM3	58531	hgsc.bcm.edu	36	16	11274713	11274713	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ABCC12	94160	hgsc.bcm.edu	36	16	46730648	46730648	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
CDH8	1006	hgsc.bcm.edu	36	16	60408995	60408995	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
SLC7A6OS	84138	hgsc.bcm.edu	36	16	66895520	66895520	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
CDH1	51343	hgsc.bcm.edu	36	16	67329720	67329720	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
DDX19A	55308	hgsc.bcm.edu	36	16	68958138	68958138	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
SNAI3	333929	hgsc.bcm.edu	36	16	87272370	87272370	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
LOXHD1	125336	hgsc.bcm.edu	36	18	42427582	42427582	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
FRMD4B	23150	hgsc.bcm.edu	36	3	69350185	69350185	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
C3orf58	205428	hgsc.bcm.edu	36	3	145187182	145187182	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
PIK3CA	5290	hgsc.bcm.edu	36	3	180410775	180410775	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
PIK3CA	5290	hgsc.bcm.edu	36	3	180418766	180418766	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
PIK3CA	5290	hgsc.bcm.edu	36	3	180420448	180420448	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
GUCY2C	2984	hgsc.bcm.edu	36	12	14740467	14740467	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
LRRK2	120892	hgsc.bcm.edu	36	12	38982935	38982935	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
CNTN1	1272	hgsc.bcm.edu	36	12	39696948	39696948	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ADAMTS20	80070	hgsc.bcm.edu	36	12	42108505	42108505	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
COL2A1	1280	hgsc.bcm.edu	36	12	46655426	46655426	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
STAB2	55576	hgsc.bcm.edu	36	12	102578251	102578251	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ZNF280D	54816	hgsc.bcm.edu	36	15	54758183	54758183	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
THSD4	79875	hgsc.bcm.edu	36	15	69837379	69837379	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
RPS6KA3	6197	hgsc.bcm.edu	36	X	20105069	20105069	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
GPR174	84636	hgsc.bcm.edu	36	X	78313903	78313903	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
G6PD	8266	hgsc.bcm.edu	36	X	153413423	153413423	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
CEP135	9662	hgsc.bcm.edu	36	4	56560533	56560533	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
MMRN1	22915	hgsc.bcm.edu	36	4	91075114	91075114	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
GAB1	128869	hgsc.bcm.edu	36	4	144556255	144556255	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
DCLK2	166614	hgsc.bcm.edu	36	4	151388207	151388207	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
NAF1	92345	hgsc.bcm.edu	36	4	164286453	164286453	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
MAP4K3	8491	hgsc.bcm.edu	36	2	39368822	39368822	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
FOXN2	3344	hgsc.bcm.edu	36	2	48426919	48426919	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
STAMBP	10617	hgsc.bcm.edu	36	2	73939975	73939975	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
MAL	57591	hgsc.bcm.edu	36	2	95077464	95077464	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ST6GAL2	84620	hgsc.bcm.edu	36	2	106813085	106813085	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
GTDC1	79712	hgsc.bcm.edu	36	2	144481358	144481358	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
SCN3A	6328	hgsc.bcm.edu	36	2	165694781	165694781	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
TTN	7273	hgsc.bcm.edu	36	2	179162357	179162357	+	Silent	SNP	C	C	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
TTN	7273	hgsc.bcm.edu	36	2	179350262	179350262	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
FRZB	2487	hgsc.bcm.edu	36	2	183411402	183411402	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
GLS	27165	hgsc.bcm.edu	36	2	191527600	191527600	+	Silent	SNP	T	T	C	rs1058592	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
BMPR2	659	hgsc.bcm.edu	36	2	203132719	203132719	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
PIKFYVE	200576	hgsc.bcm.edu	36	2	208871667	208871667	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
C2orf67	151050	hgsc.bcm.edu	36	2	210648571	210648571	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ABCA1	19	hgsc.bcm.edu	36	9	106620982	106620982	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
BRCA2	675	hgsc.bcm.edu	36	13	31851499	31851499	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
FREM2	341640	hgsc.bcm.edu	36	13	38330051	38330051	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
C10orf79	80217	hgsc.bcm.edu	36	10	105910854	105910854	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
FGFR2	2263	hgsc.bcm.edu	36	10	123237573	123237573	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ZNF622	90441	hgsc.bcm.edu	36	5	16504863	16504863	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
IL31RA	133396	hgsc.bcm.edu	36	5	55183208	55183208	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ST8SIA4	7903	hgsc.bcm.edu	36	5	100250173	100250173	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
SP140	11262	hgsc.bcm.edu	36	2	230826274	230826274	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
APC	324	hgsc.bcm.edu	36	5	112198762	112198762	+	Splice_Site	SNP	G	G	A	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
RPTN	126638	hgsc.bcm.edu	36	1	150395690	150395725	+	In_Frame_Del	DEL	TGGTGGGAATCTCTGTCTTGTTTCTCAGACTGACCA	TGGTGGGAATCTCTGTCTTGTTTCTCAGACTGACCA	-	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	TGGTGGGAATCTCTGTCTTGTTTCTCAGACTGACCA	TGGTGGGAATCTCTGTCTTGTTTCTCAGACTGACCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
FMN2	56776	hgsc.bcm.edu	36	1	238437537	238437569	+	In_Frame_Del	DEL	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC	-	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944292	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
RG9MTD1	54931	hgsc.bcm.edu	36	3	102766699	102766699	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
MUC4	4585	hgsc.bcm.edu	36	3	196993221	196993316	+	In_Frame_Del	DEL	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA	-	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
KRTAP5-4	387267	hgsc.bcm.edu	36	11	1599823	1599843	+	In_Frame_Del	DEL	GAGCCACAGCCCCCACAGCCG	GAGCCACAGCCCCCACAGCCG	-	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	GAGCCACAGCCCCCACAGCCG	GAGCCACAGCCCCCACAGCCG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
ESRRA	2101	hgsc.bcm.edu	36	11	63839872	63839874	+	In_Frame_Del	DEL	GGG	GGG	-	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	GGG	GGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
SELPLG	6404	hgsc.bcm.edu	36	12	107541780	107541809	+	Frame_Shift_Del	DEL	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT	-	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
FBXL3	26224	hgsc.bcm.edu	36	13	76479684	76479684	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
TP53	7157	hgsc.bcm.edu	36	17	7518981	7518982	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CM-6679-01A-11D-1835-10	TCGA-CM-6679-10A-01D-1835-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	e3f44b7a-8295-42be-a45b-aeb079f11287	c049605c-bfcf-464e-b24f-5e0459dbdc8d
