Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
GLI3	2737	hgsc.bcm.edu	36	7	41972331	41972331	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
AEBP1	165	hgsc.bcm.edu	36	7	44119944	44119944	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
LMTK2	22853	hgsc.bcm.edu	36	7	97638836	97638836	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ARPC1B	10095	hgsc.bcm.edu	36	7	98823696	98823696	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
SMO	54498	hgsc.bcm.edu	36	7	128632476	128632476	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CPA1	1357	hgsc.bcm.edu	36	7	129812263	129812263	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TAS2R3	50831	hgsc.bcm.edu	36	7	141110752	141110752	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ID1	3397	hgsc.bcm.edu	36	20	29657149	29657149	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MATN4	8785	hgsc.bcm.edu	36	20	43366657	43366657	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZSWIM3	140831	hgsc.bcm.edu	36	20	43940614	43940614	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZNF335	63925	hgsc.bcm.edu	36	20	44015936	44015936	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CTCFL	140690	hgsc.bcm.edu	36	20	55532495	55532495	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GATA5	140628	hgsc.bcm.edu	36	20	60482024	60482024	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ARFGAP3	26286	hgsc.bcm.edu	36	22	41543750	41543750	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
C14orf39	317761	hgsc.bcm.edu	36	14	59973447	59973447	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
SYNE2	23224	hgsc.bcm.edu	36	14	63589919	63589919	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
AKT1	207	hgsc.bcm.edu	36	14	104317596	104317596	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
AHNAK2	113146	hgsc.bcm.edu	36	14	104489579	104489579	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GPR132	29933	hgsc.bcm.edu	36	14	104588573	104588573	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
STK11	6794	hgsc.bcm.edu	36	19	1170403	1170403	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
SMARCA4	6597	hgsc.bcm.edu	36	19	10975031	10975031	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TSHZ3	57616	hgsc.bcm.edu	36	19	36461166	36461166	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CLASRP	0	hgsc.bcm.edu	36	19	50259171	50259171	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
RSPH6A	0	hgsc.bcm.edu	36	19	50999608	50999608	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GRLF1	2909	hgsc.bcm.edu	36	19	52114478	52114478	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MYBPC2	4606	hgsc.bcm.edu	36	19	55654291	55654291	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MFHAS1	9258	hgsc.bcm.edu	36	8	8785018	8785018	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
RP1L1	94137	hgsc.bcm.edu	36	8	10507721	10507721	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ADAM7	8756	hgsc.bcm.edu	36	8	24380277	24380277	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
PTK2B	2185	hgsc.bcm.edu	36	8	27347990	27347990	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
PXDNL	137902	hgsc.bcm.edu	36	8	52484285	52484285	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
LRRC6	23639	hgsc.bcm.edu	36	8	133692746	133692746	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TTLL10	254173	hgsc.bcm.edu	36	1	1105467	1105467	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZMYM4	9202	hgsc.bcm.edu	36	1	35653696	35653696	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ELTD1	64123	hgsc.bcm.edu	36	1	79129887	79129887	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
AKNAD1	0	hgsc.bcm.edu	36	1	109171419	109171419	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GJA8	2703	hgsc.bcm.edu	36	1	145847250	145847250	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ENSA	2029	hgsc.bcm.edu	36	1	148866649	148866649	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CELF3	11189	hgsc.bcm.edu	36	1	149945824	149945824	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
FLG2	388698	hgsc.bcm.edu	36	1	150593691	150593691	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
IVL	3713	hgsc.bcm.edu	36	1	151149576	151149576	+	Missense_Mutation	SNP	G	G	C	rs11807064	byCluster	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
OR6Y1	391112	hgsc.bcm.edu	36	1	156783814	156783814	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
OR10J5	127385	hgsc.bcm.edu	36	1	157771753	157771753	+	Silent	SNP	G	G	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
HMCN1	83872	hgsc.bcm.edu	36	1	184273689	184273689	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CD46	4179	hgsc.bcm.edu	36	1	205999670	205999670	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
RPS6KC1	26750	hgsc.bcm.edu	36	1	211482068	211482068	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
KCNK2	3776	hgsc.bcm.edu	36	1	213434926	213434926	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
SPATA17	128153	hgsc.bcm.edu	36	1	216022197	216022197	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MARK1	4139	hgsc.bcm.edu	36	1	218875350	218875350	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
OBSCN	84033	hgsc.bcm.edu	36	1	226573310	226573310	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CHML	1122	hgsc.bcm.edu	36	1	239864886	239864886	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
KIF26B	55083	hgsc.bcm.edu	36	1	243915940	243915940	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
OR2W3	343171	hgsc.bcm.edu	36	1	246126004	246126004	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
OR4D10	390197	hgsc.bcm.edu	36	11	59001783	59001783	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MEN1	4221	hgsc.bcm.edu	36	11	64332046	64332046	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TBC1D10C	374403	hgsc.bcm.edu	36	11	66930931	66930931	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
RSF1	51773	hgsc.bcm.edu	36	11	77063772	77063772	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CASP4	837	hgsc.bcm.edu	36	11	104325502	104325502	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GRIK4	2900	hgsc.bcm.edu	36	11	120281314	120281314	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
DST	667	hgsc.bcm.edu	36	6	56612967	56612967	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
BAI3	577	hgsc.bcm.edu	36	6	70155406	70155406	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
KCNQ5	56479	hgsc.bcm.edu	36	6	73844240	73844240	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
COL12A1	1303	hgsc.bcm.edu	36	6	75949715	75949715	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
RPF2	84154	hgsc.bcm.edu	36	6	111427608	111427608	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
KATNA1	11104	hgsc.bcm.edu	36	6	149961121	149961121	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
KIF25	3834	hgsc.bcm.edu	36	6	168173121	168173121	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CCDC42	146849	hgsc.bcm.edu	36	17	8585692	8585692	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MAP2K4	6416	hgsc.bcm.edu	36	17	11925509	11925509	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
PIGW	284098	hgsc.bcm.edu	36	17	31967972	31967972	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
STAT5A	6776	hgsc.bcm.edu	36	17	37705303	37705303	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
BRCA1	672	hgsc.bcm.edu	36	17	38498049	38498049	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
DNAH17	8632	hgsc.bcm.edu	36	17	73941827	73941827	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
KRTAP21-3	100288323	hgsc.bcm.edu	36	21	31012804	31012804	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GCFC1	0	hgsc.bcm.edu	36	21	33054102	33054102	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CACNA1H	8912	hgsc.bcm.edu	36	16	1207971	1207971	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CREBBP	1387	hgsc.bcm.edu	36	16	3757814	3757814	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ITGAX	3687	hgsc.bcm.edu	36	16	31282136	31282136	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
HYDIN	54768	hgsc.bcm.edu	36	16	69512515	69512515	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
HYDIN	54768	hgsc.bcm.edu	36	16	69535316	69535316	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZNF469	84627	hgsc.bcm.edu	36	16	87030109	87030109	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CIDEA	1149	hgsc.bcm.edu	36	18	12264238	12264238	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MYRIP	25924	hgsc.bcm.edu	36	3	40060603	40060603	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
PRSS42	0	hgsc.bcm.edu	36	3	46846918	46846918	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZMYND10	51364	hgsc.bcm.edu	36	3	50355578	50355578	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
HEMK1	51409	hgsc.bcm.edu	36	3	50584628	50584628	+	Silent	SNP	T	T	G	rs2232248	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
OSBPL11	114885	hgsc.bcm.edu	36	3	126781482	126781482	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
P2RY14	9934	hgsc.bcm.edu	36	3	152413883	152413883	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
PIK3CA	5290	hgsc.bcm.edu	36	3	180434675	180434675	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GNB3	2784	hgsc.bcm.edu	36	12	6825159	6825159	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
A2M	2	hgsc.bcm.edu	36	12	9145448	9145448	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
KRAS	3845	hgsc.bcm.edu	36	12	25269829	25269829	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
NCKAP1L	3071	hgsc.bcm.edu	36	12	53179516	53179516	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
DPY19L2	283417	hgsc.bcm.edu	36	12	62240672	62240672	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CRY1	1407	hgsc.bcm.edu	36	12	105919271	105919271	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ACADS	35	hgsc.bcm.edu	36	12	119661594	119661594	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
INO80	54617	hgsc.bcm.edu	36	15	39149141	39149141	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MAPKBP1	23005	hgsc.bcm.edu	36	15	39894826	39894826	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TP53BP1	7158	hgsc.bcm.edu	36	15	41558898	41558898	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MAPK6	5597	hgsc.bcm.edu	36	15	50126140	50126140	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GNB5	10681	hgsc.bcm.edu	36	15	50204030	50204030	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CSPG4	1464	hgsc.bcm.edu	36	15	73769687	73769687	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
RASGRF1	5923	hgsc.bcm.edu	36	15	77091889	77091889	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ARSF	416	hgsc.bcm.edu	36	X	3012505	3012505	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
FAM123B	139285	hgsc.bcm.edu	36	X	63328301	63328301	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
KIF4A	24137	hgsc.bcm.edu	36	X	69480456	69480456	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CYLC1	1538	hgsc.bcm.edu	36	X	83015075	83015075	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
KLHL4	56062	hgsc.bcm.edu	36	X	86659746	86659746	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZMAT1	84460	hgsc.bcm.edu	36	X	101025269	101025269	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CXorf57	55086	hgsc.bcm.edu	36	X	105755134	105755134	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GUCY2F	2986	hgsc.bcm.edu	36	X	108506039	108506039	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CHRDL1	91851	hgsc.bcm.edu	36	X	109824151	109824151	+	Missense_Mutation	SNP	C	C	T	rs11554172	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
OR13H1	347468	hgsc.bcm.edu	36	X	130505963	130505963	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
STX18	53407	hgsc.bcm.edu	36	4	4509856	4509856	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
N4BP2	55728	hgsc.bcm.edu	36	4	39815003	39815003	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
N4BP2	55728	hgsc.bcm.edu	36	4	39815004	39815004	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
DCAF4L1	0	hgsc.bcm.edu	36	4	41678905	41678905	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GK2	2712	hgsc.bcm.edu	36	4	80546759	80546759	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
AFF1	4299	hgsc.bcm.edu	36	4	88275856	88275856	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ENPEP	2028	hgsc.bcm.edu	36	4	111617454	111617454	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ANK2	287	hgsc.bcm.edu	36	4	114497792	114497792	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZNF827	152485	hgsc.bcm.edu	36	4	147043498	147043498	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GRIA2	2891	hgsc.bcm.edu	36	4	158476327	158476327	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TLR3	7098	hgsc.bcm.edu	36	4	187234971	187234971	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
FAM49A	81553	hgsc.bcm.edu	36	2	16606236	16606236	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
RAD51AP2	729475	hgsc.bcm.edu	36	2	17555667	17555667	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
NT5C1B	93034	hgsc.bcm.edu	36	2	18629294	18629294	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TIA1	7072	hgsc.bcm.edu	36	2	70296878	70296878	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
FBXO41	150726	hgsc.bcm.edu	36	2	73349524	73349524	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TSN	7247	hgsc.bcm.edu	36	2	122237103	122237103	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
RAB6C	84084	hgsc.bcm.edu	36	2	130454727	130454727	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZEB2	9839	hgsc.bcm.edu	36	2	144863840	144863840	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
SLC4A10	57282	hgsc.bcm.edu	36	2	162521984	162521984	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TTN	7273	hgsc.bcm.edu	36	2	179180797	179180797	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
SSFA2	6744	hgsc.bcm.edu	36	2	182501164	182501164	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZNF804A	91752	hgsc.bcm.edu	36	2	185439357	185439357	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ABCA12	26154	hgsc.bcm.edu	36	2	215507131	215507131	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
OBSL1	23363	hgsc.bcm.edu	36	2	220140901	220140901	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
UGT1A8	54576	hgsc.bcm.edu	36	2	234345675	234345675	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
COL6A3	1293	hgsc.bcm.edu	36	2	237952152	237952152	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
SNED1	25992	hgsc.bcm.edu	36	2	241618577	241618577	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
DOCK8	81704	hgsc.bcm.edu	36	9	369837	369837	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TAF1L	138474	hgsc.bcm.edu	36	9	32624800	32624800	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
AQP7	364	hgsc.bcm.edu	36	9	33375667	33375667	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
AQP7	364	hgsc.bcm.edu	36	9	33375690	33375690	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
AQP7	364	hgsc.bcm.edu	36	9	33375698	33375698	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
OMD	4958	hgsc.bcm.edu	36	9	94218966	94218966	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
PTCH1	5727	hgsc.bcm.edu	36	9	97287927	97287927	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
OR1B1	347169	hgsc.bcm.edu	36	9	124430890	124430890	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
BRD3	8019	hgsc.bcm.edu	36	9	135908383	135908383	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MAMDC4	158056	hgsc.bcm.edu	36	9	138867391	138867391	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
PCDH20	64881	hgsc.bcm.edu	36	13	60884320	60884320	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TMTC4	84899	hgsc.bcm.edu	36	13	100113233	100113233	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ERCC5	2073	hgsc.bcm.edu	36	13	102313169	102313169	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
COL4A1	1282	hgsc.bcm.edu	36	13	109600739	109600739	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
BEND7	222389	hgsc.bcm.edu	36	10	13562944	13562944	+	Silent	SNP	G	G	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
VIM	7431	hgsc.bcm.edu	36	10	17315662	17315662	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
KIAA1217	56243	hgsc.bcm.edu	36	10	24871856	24871856	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ANKRD30A	91074	hgsc.bcm.edu	36	10	37522153	37522153	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
BMS1	9790	hgsc.bcm.edu	36	10	42638595	42638595	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
C10orf131	100127889	hgsc.bcm.edu	36	10	97687751	97687751	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
PDCD4	27250	hgsc.bcm.edu	36	10	112635092	112635092	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
DMBT1	1755	hgsc.bcm.edu	36	10	124335785	124335785	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
C10orf125	282969	hgsc.bcm.edu	36	10	135020484	135020484	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
C5orf42	65250	hgsc.bcm.edu	36	5	37211805	37211805	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZSWIM6	57688	hgsc.bcm.edu	36	5	60871320	60871320	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
C5orf44	80006	hgsc.bcm.edu	36	5	64978671	64978671	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
APC	324	hgsc.bcm.edu	36	5	112203456	112203456	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
APC	324	hgsc.bcm.edu	36	5	112203538	112203538	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MEGF10	84466	hgsc.bcm.edu	36	5	126798397	126798397	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
AFF4	27125	hgsc.bcm.edu	36	5	132298122	132298122	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
SLC36A3	285641	hgsc.bcm.edu	36	5	150647201	150647201	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CHD1L	9557	hgsc.bcm.edu	36	1	145218490	145218490	+	Splice_Site	SNP	T	T	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
UBE2Q1	55585	hgsc.bcm.edu	36	1	152790039	152790040	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
FMN2	56776	hgsc.bcm.edu	36	1	238437589	238437621	+	In_Frame_Del	DEL	GCAATACCCCCTCCGCCCCCTCTTCCCGGGGCA	GCAATACCCCCTCCGCCCCCTCTTCCCGGGGCA	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	GCAATACCCCCTCCGCCCCCTCTTCCCGGGGCA	GCAATACCCCCTCCGCCCCCTCTTCCCGGGGCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
WBP1	23559	hgsc.bcm.edu	36	2	74541050	74541051	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
RBM43	375287	hgsc.bcm.edu	36	2	151816334	151816334	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944292	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
WDSUB1	151525	hgsc.bcm.edu	36	2	159836467	159836468	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MYL1	4632	hgsc.bcm.edu	36	2	210888011	210888011	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
SPATA3	130560	hgsc.bcm.edu	36	2	231569277	231569303	+	In_Frame_Del	DEL	CAGCAGCCTAGCCCTGAATCCACACCA	CAGCAGCCTAGCCCTGAATCCACACCA	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	CAGCAGCCTAGCCCTGAATCCACACCA	CAGCAGCCTAGCCCTGAATCCACACCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZNF717	100131827	hgsc.bcm.edu	36	3	75869005	75869013	+	In_Frame_Del	DEL	CTACATTCT	CTACATTCT	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	CTACATTCT	CTACATTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MUC4	4585	hgsc.bcm.edu	36	3	196993221	196993316	+	In_Frame_Del	DEL	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA	CTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
MUC4	4585	hgsc.bcm.edu	36	3	196994865	196994912	+	In_Frame_Del	DEL	TGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGT	TGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGT	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	TGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGT	TGGTGACATGAAGAGGGGTGGCGTGACCTGTGGATACTGAGGAAGTGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
APC	324	hgsc.bcm.edu	36	5	112201926	112201935	+	Frame_Shift_Del	DEL	ACATTGTGTG	ACATTGTGTG	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	ACATTGTGTG	ACATTGTGTG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
HLA-DQA1	3117	hgsc.bcm.edu	36	6	32717217	32717219	+	In_Frame_Del	DEL	GGT	GGT	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	GGT	GGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
WIPF3	644150	hgsc.bcm.edu	36	7	29890172	29890172	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
SGK223	0	hgsc.bcm.edu	36	8	8272278	8272279	+	In_Frame_Ins	INS	-	-	GCCGCT	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
RIC8A	60626	hgsc.bcm.edu	36	11	199895	199897	+	In_Frame_Del	DEL	CCC	CCC	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	CCC	CCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
NCOR2	9612	hgsc.bcm.edu	36	12	123390674	123390675	+	In_Frame_Ins	INS	-	-	GCCGCTGCT	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
DDHD1	80821	hgsc.bcm.edu	36	14	52689230	52689231	+	In_Frame_Ins	INS	-	-	GCCGCC	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
ZFP36L1	677	hgsc.bcm.edu	36	14	68326491	68326491	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GOLGA6L6	0	hgsc.bcm.edu	36	15	18999858	18999899	+	In_Frame_Del	DEL	GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT	GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT	GTATCTTCTCCTCCTGCTCCCGTATCTTCTCCTCCTGCTCCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
WDR73	84942	hgsc.bcm.edu	36	15	82987881	82987898	+	In_Frame_Del	DEL	CTTGGCTCCGTGTTCCAT	CTTGGCTCCGTGTTCCAT	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	CTTGGCTCCGTGTTCCAT	CTTGGCTCCGTGTTCCAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
CHD2	1106	hgsc.bcm.edu	36	15	91341320	91341320	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
GRAPL	0	hgsc.bcm.edu	36	17	18976722	18976723	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
SOX9	6662	hgsc.bcm.edu	36	17	67631909	67631910	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
USP36	57602	hgsc.bcm.edu	36	17	74310144	74310149	+	In_Frame_Del	DEL	TTTTTC	TTTTTC	-	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	TTTTTC	TTTTTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
NEFH	4744	hgsc.bcm.edu	36	22	28215567	28215568	+	In_Frame_Ins	INS	-	-	AAGTCCCCTGAGAAGGCC	novel	unknown	TCGA-D5-5537-01A-21D-1924-10	TCGA-D5-5537-10A-01D-1924-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	f010c9a7-3514-485d-a100-18d38760b8c8	9ddfa31a-ca58-4b52-b3f1-92e1a50b75cf
