Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
ICA1	3382	hgsc.bcm.edu	36	7	8164734	8164734	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SP4	6671	hgsc.bcm.edu	36	7	21436534	21436534	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DNAH11	8701	hgsc.bcm.edu	36	7	21607027	21607027	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DNAH11	8701	hgsc.bcm.edu	36	7	21642063	21642063	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DNAH11	8701	hgsc.bcm.edu	36	7	21872755	21872755	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
GPR141	353345	hgsc.bcm.edu	36	7	37747433	37747433	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
STARD3NL	83930	hgsc.bcm.edu	36	7	38223157	38223157	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
MYO1G	64005	hgsc.bcm.edu	36	7	44977031	44977031	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
EGFR	1956	hgsc.bcm.edu	36	7	55200535	55200535	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
EGFR	1956	hgsc.bcm.edu	36	7	55233963	55233963	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CROT	54677	hgsc.bcm.edu	36	7	86849386	86849386	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CALCR	799	hgsc.bcm.edu	36	7	92946683	92946683	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PEG10	23089	hgsc.bcm.edu	36	7	94132690	94132690	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SERPINE1	5054	hgsc.bcm.edu	36	7	100560465	100560465	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PPP1R3A	5506	hgsc.bcm.edu	36	7	113309379	113309379	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RBM28	55131	hgsc.bcm.edu	36	7	127740545	127740545	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FLNC	2318	hgsc.bcm.edu	36	7	128264473	128264473	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TSGA13	114960	hgsc.bcm.edu	36	7	130019034	130019034	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
EZH2	2146	hgsc.bcm.edu	36	7	148155190	148155190	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
HTR5A	3361	hgsc.bcm.edu	36	7	154494030	154494030	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PAK7	57144	hgsc.bcm.edu	36	20	9494762	9494762	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ASXL1	171023	hgsc.bcm.edu	36	20	30486532	30486532	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PRPF6	24148	hgsc.bcm.edu	36	20	62101482	62101482	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FBXO7	25793	hgsc.bcm.edu	36	22	31211058	31211058	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CBX7	23492	hgsc.bcm.edu	36	22	37860395	37860395	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CACNA1I	8911	hgsc.bcm.edu	36	22	38296921	38296921	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
EP300	2033	hgsc.bcm.edu	36	22	39890005	39890005	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
MYH7	4625	hgsc.bcm.edu	36	14	22967681	22967681	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
NID2	22795	hgsc.bcm.edu	36	14	51547352	51547352	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PRKCH	5583	hgsc.bcm.edu	36	14	60994041	60994041	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KCNH5	27133	hgsc.bcm.edu	36	14	62486993	62486993	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CYP46A1	10858	hgsc.bcm.edu	36	14	99236174	99236174	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PIP5K1C	23396	hgsc.bcm.edu	36	19	3594305	3594305	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
C3	718	hgsc.bcm.edu	36	19	6671586	6671586	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SH2D3A	10045	hgsc.bcm.edu	36	19	6706042	6706042	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SLC44A2	57153	hgsc.bcm.edu	36	19	10608210	10608210	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ZNF791	163049	hgsc.bcm.edu	36	19	12599844	12599844	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
LPHN1	22859	hgsc.bcm.edu	36	19	14122849	14122849	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
OR7C2	26658	hgsc.bcm.edu	36	19	14913697	14913697	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
UNC13A	23025	hgsc.bcm.edu	36	19	17613350	17613350	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
UPF1	5976	hgsc.bcm.edu	36	19	18826431	18826431	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ZNF91	7644	hgsc.bcm.edu	36	19	23337260	23337260	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
LRFN3	79414	hgsc.bcm.edu	36	19	41123334	41123334	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ZFP30	22835	hgsc.bcm.edu	36	19	42817825	42817825	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
LIG1	26018	hgsc.bcm.edu	36	19	53348953	53348953	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CPT1C	126129	hgsc.bcm.edu	36	19	54907846	54907846	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ZNF473	25888	hgsc.bcm.edu	36	19	55234261	55234261	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SYT3	84258	hgsc.bcm.edu	36	19	55824960	55824960	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PRKDC	5591	hgsc.bcm.edu	36	8	48903431	48903431	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
LYN	4067	hgsc.bcm.edu	36	8	57041905	57041905	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ARFGEF1	10565	hgsc.bcm.edu	36	8	68286375	68286375	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CPA6	57094	hgsc.bcm.edu	36	8	68502842	68502842	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KCNB2	9312	hgsc.bcm.edu	36	8	74012020	74012020	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
POU5F1B	5462	hgsc.bcm.edu	36	8	128497367	128497367	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PLEC	0	hgsc.bcm.edu	36	8	145066950	145066950	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TMEM201	199953	hgsc.bcm.edu	36	1	9590390	9590390	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
HSPG2	3339	hgsc.bcm.edu	36	1	22077666	22077666	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
USP24	23358	hgsc.bcm.edu	36	1	55344492	55344492	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
WDR78	79819	hgsc.bcm.edu	36	1	67131677	67131677	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
BRDT	676	hgsc.bcm.edu	36	1	92202844	92202844	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
C1orf59	113802	hgsc.bcm.edu	36	1	108994514	108994514	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
HRNR	388697	hgsc.bcm.edu	36	1	150458433	150458433	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FLG	2312	hgsc.bcm.edu	36	1	150546321	150546321	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FLG	2312	hgsc.bcm.edu	36	1	150546322	150546322	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FLG	2312	hgsc.bcm.edu	36	1	150548234	150548234	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FLG	2312	hgsc.bcm.edu	36	1	150552420	150552420	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FLG2	388698	hgsc.bcm.edu	36	1	150594499	150594499	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ARHGEF2	9181	hgsc.bcm.edu	36	1	154194231	154194231	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
MYOC	4653	hgsc.bcm.edu	36	1	169874363	169874363	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PAPPA2	60676	hgsc.bcm.edu	36	1	174935244	174935244	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RGSL1	353299	hgsc.bcm.edu	36	1	180709753	180709753	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
B3GALT2	8707	hgsc.bcm.edu	36	1	191416308	191416308	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CACNA1S	779	hgsc.bcm.edu	36	1	199313756	199313756	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SOX13	9580	hgsc.bcm.edu	36	1	202358654	202358654	+	Silent	SNP	G	G	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CR1L	1379	hgsc.bcm.edu	36	1	205939202	205939202	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
LPGAT1	9926	hgsc.bcm.edu	36	1	210023255	210023255	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TMEM206	55248	hgsc.bcm.edu	36	1	210615212	210615212	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
USH2A	7399	hgsc.bcm.edu	36	1	214564266	214564266	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DISP1	84976	hgsc.bcm.edu	36	1	221245576	221245576	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
OBSCN	84033	hgsc.bcm.edu	36	1	226605220	226605220	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
NID1	4811	hgsc.bcm.edu	36	1	234271978	234271978	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CHML	1122	hgsc.bcm.edu	36	1	239863808	239863808	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
OR2T11	127077	hgsc.bcm.edu	36	1	246856258	246856258	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ZNF692	55657	hgsc.bcm.edu	36	1	247116712	247116712	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
IFITM3	10410	hgsc.bcm.edu	36	11	310804	310804	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
NUP98	4928	hgsc.bcm.edu	36	11	3756784	3756784	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
IGSF22	283284	hgsc.bcm.edu	36	11	18699664	18699664	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
BDNF	627	hgsc.bcm.edu	36	11	27636309	27636309	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
WT1	7490	hgsc.bcm.edu	36	11	32370837	32370837	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
OR5L1	219437	hgsc.bcm.edu	36	11	55336329	55336329	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
OR8J1	219477	hgsc.bcm.edu	36	11	55884915	55884915	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
OR5M3	219482	hgsc.bcm.edu	36	11	55994078	55994078	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SLC22A20	440044	hgsc.bcm.edu	36	11	64746591	64746591	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SPTBN2	6712	hgsc.bcm.edu	36	11	66211915	66211915	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FAT3	120114	hgsc.bcm.edu	36	11	92256195	92256195	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
AMOTL1	154810	hgsc.bcm.edu	36	11	94242225	94242225	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TECTA	7007	hgsc.bcm.edu	36	11	120494284	120494284	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
C11orf63	79864	hgsc.bcm.edu	36	11	122322552	122322552	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DSP	1834	hgsc.bcm.edu	36	6	7526611	7526611	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RNF182	221687	hgsc.bcm.edu	36	6	14085501	14085501	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
UNC5CL	222643	hgsc.bcm.edu	36	6	41109871	41109871	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CUL9	23113	hgsc.bcm.edu	36	6	43281815	43281815	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PKHD1	5314	hgsc.bcm.edu	36	6	52005864	52005864	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KCNQ5	56479	hgsc.bcm.edu	36	6	73899956	73899956	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CD109	135228	hgsc.bcm.edu	36	6	74528863	74528863	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SENP6	26054	hgsc.bcm.edu	36	6	76429801	76429801	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
C6orf165	154313	hgsc.bcm.edu	36	6	88182300	88182300	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CNR1	56144	hgsc.bcm.edu	36	6	88911622	88911622	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
LAMA4	3910	hgsc.bcm.edu	36	6	112568718	112568718	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ROS1	6098	hgsc.bcm.edu	36	6	117822072	117822072	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
AKAP7	9465	hgsc.bcm.edu	36	6	131644385	131644385	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ENPP3	5169	hgsc.bcm.edu	36	6	132089031	132089031	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
NMBR	4829	hgsc.bcm.edu	36	6	142451227	142451227	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SYNE1	23345	hgsc.bcm.edu	36	6	152502833	152502833	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FRMD1	79981	hgsc.bcm.edu	36	6	168208427	168208427	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SPAG7	9552	hgsc.bcm.edu	36	17	4804841	4804841	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TP53	7157	hgsc.bcm.edu	36	17	7518251	7518251	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TP53	7157	hgsc.bcm.edu	36	17	7519131	7519131	+	Missense_Mutation	SNP	C	C	T	rs28934578	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SLC5A10	125206	hgsc.bcm.edu	36	17	18804634	18804634	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
NF1	4763	hgsc.bcm.edu	36	17	26573011	26573011	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SLFN13	146857	hgsc.bcm.edu	36	17	30792845	30792845	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
BRCA1	672	hgsc.bcm.edu	36	17	38497654	38497654	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
BRCA1	672	hgsc.bcm.edu	36	17	38499721	38499721	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
GJC1	125111	hgsc.bcm.edu	36	17	40238130	40238130	+	Silent	SNP	C	C	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KIF2B	84643	hgsc.bcm.edu	36	17	49256039	49256039	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
AKAP1	8165	hgsc.bcm.edu	36	17	52538071	52538071	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
BPTF	2186	hgsc.bcm.edu	36	17	63338650	63338650	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ABCA10	10349	hgsc.bcm.edu	36	17	64683230	64683230	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FAM100B	283991	hgsc.bcm.edu	36	17	71777996	71777996	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CCDC40	55036	hgsc.bcm.edu	36	17	75670087	75670087	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RPTOR	57521	hgsc.bcm.edu	36	17	76319025	76319025	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
HGS	9146	hgsc.bcm.edu	36	17	77263775	77263775	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DSCR4	10281	hgsc.bcm.edu	36	21	38348854	38348854	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KRTAP10-12	386685	hgsc.bcm.edu	36	21	44941616	44941616	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RGS11	8786	hgsc.bcm.edu	36	16	261023	261023	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
HMOX2	3163	hgsc.bcm.edu	36	16	4499492	4499492	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
C16orf82	162083	hgsc.bcm.edu	36	16	26985891	26985891	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PHKB	5257	hgsc.bcm.edu	36	16	46260800	46260800	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ZNF423	23090	hgsc.bcm.edu	36	16	48228534	48228534	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CDH11	1009	hgsc.bcm.edu	36	16	63590181	63590181	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
JPH3	57338	hgsc.bcm.edu	36	16	86235715	86235715	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
LAMA1	284217	hgsc.bcm.edu	36	18	7040796	7040796	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DSG2	1829	hgsc.bcm.edu	36	18	27370346	27370346	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SMAD4	4089	hgsc.bcm.edu	36	18	46829102	46829102	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SMAD4	4089	hgsc.bcm.edu	36	18	46858753	46858753	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ALPK2	115701	hgsc.bcm.edu	36	18	54397219	54397219	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
NETO1	81832	hgsc.bcm.edu	36	18	68568397	68568397	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
VHL	7428	hgsc.bcm.edu	36	3	10166591	10166591	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TGFBR2	7048	hgsc.bcm.edu	36	3	30666787	30666787	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SCN5A	6331	hgsc.bcm.edu	36	3	38567260	38567260	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CTNNB1	1499	hgsc.bcm.edu	36	3	41241926	41241926	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SETD2	29072	hgsc.bcm.edu	36	3	47073752	47073752	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SMARCC1	6599	hgsc.bcm.edu	36	3	47679057	47679057	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
HYAL2	8692	hgsc.bcm.edu	36	3	50332187	50332187	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
C3orf63	23272	hgsc.bcm.edu	36	3	56650736	56650736	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CADPS	8618	hgsc.bcm.edu	36	3	62453050	62453050	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SHQ1	55164	hgsc.bcm.edu	36	3	72949146	72949146	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ROBO2	6092	hgsc.bcm.edu	36	3	77682746	77682746	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
EPHA3	2042	hgsc.bcm.edu	36	3	89473803	89473803	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KIAA1524	57650	hgsc.bcm.edu	36	3	109764707	109764707	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SI	6490	hgsc.bcm.edu	36	3	166267839	166267839	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SI	6490	hgsc.bcm.edu	36	3	166267841	166267841	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PRKCI	5584	hgsc.bcm.edu	36	3	171423212	171423212	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PIK3CA	5290	hgsc.bcm.edu	36	3	180399548	180399548	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PIK3CA	5290	hgsc.bcm.edu	36	3	180434744	180434744	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DNAJB11	51726	hgsc.bcm.edu	36	3	187782492	187782492	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DNAJB11	51726	hgsc.bcm.edu	36	3	187782493	187782493	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DLG1	1739	hgsc.bcm.edu	36	3	198327347	198327347	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TAS2R19	259294	hgsc.bcm.edu	36	12	11066120	11066120	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PTPRO	10076	hgsc.bcm.edu	36	12	15541453	15541453	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KRAS	3845	hgsc.bcm.edu	36	12	25289551	25289551	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KRT6C	286887	hgsc.bcm.edu	36	12	51153311	51153311	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SOAT2	8435	hgsc.bcm.edu	36	12	51795458	51795458	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TIMELESS	8914	hgsc.bcm.edu	36	12	55104938	55104938	+	Silent	SNP	C	C	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
NUP107	57122	hgsc.bcm.edu	36	12	67411753	67411753	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PPP1R12A	4659	hgsc.bcm.edu	36	12	78727879	78727879	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
LRRIQ1	84125	hgsc.bcm.edu	36	12	83973689	83973689	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
APAF1	317	hgsc.bcm.edu	36	12	97567504	97567504	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ANKS1B	56899	hgsc.bcm.edu	36	12	98072353	98072353	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SLC41A2	84102	hgsc.bcm.edu	36	12	103845916	103845916	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PLBD2	196463	hgsc.bcm.edu	36	12	112307400	112307400	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ANAPC5	51433	hgsc.bcm.edu	36	12	120252818	120252818	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SFSWAP	0	hgsc.bcm.edu	36	12	130816785	130816785	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
OTUD7A	161725	hgsc.bcm.edu	36	15	29563750	29563750	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PIAS1	8554	hgsc.bcm.edu	36	15	66221345	66221345	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ALPK3	57538	hgsc.bcm.edu	36	15	83202522	83202522	+	Silent	SNP	T	T	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
WWC3	55841	hgsc.bcm.edu	36	X	10054325	10054325	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FRMPD4	9758	hgsc.bcm.edu	36	X	12644516	12644516	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
BEND2	139105	hgsc.bcm.edu	36	X	18144654	18144654	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
MAGEB16	139604	hgsc.bcm.edu	36	X	35730537	35730537	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ZNF630	57232	hgsc.bcm.edu	36	X	47804444	47804444	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SYP	6855	hgsc.bcm.edu	36	X	48936735	48936735	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
AR	374	hgsc.bcm.edu	36	X	66854186	66854186	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
AWAT1	158833	hgsc.bcm.edu	36	X	69376744	69376744	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KIF4A	24137	hgsc.bcm.edu	36	X	69427358	69427358	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TEX11	56159	hgsc.bcm.edu	36	X	69743566	69743566	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RLIM	51132	hgsc.bcm.edu	36	X	73728373	73728373	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CYSLTR1	10800	hgsc.bcm.edu	36	X	77415024	77415024	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CYLC1	1538	hgsc.bcm.edu	36	X	83016243	83016243	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KIAA1210	57481	hgsc.bcm.edu	36	X	118107343	118107343	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ODZ1	10178	hgsc.bcm.edu	36	X	123603388	123603388	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CDR1	1038	hgsc.bcm.edu	36	X	139694179	139694179	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PPP2R2C	5522	hgsc.bcm.edu	36	4	6425193	6425193	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
BOD1L	259282	hgsc.bcm.edu	36	4	13215100	13215100	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FAM184B	27146	hgsc.bcm.edu	36	4	17320107	17320107	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SLIT2	9353	hgsc.bcm.edu	36	4	19864700	19864700	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CWH43	0	hgsc.bcm.edu	36	4	48700524	48700524	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
YTHDC1	91746	hgsc.bcm.edu	36	4	68885727	68885727	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
UTP3	57050	hgsc.bcm.edu	36	4	71773356	71773356	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
BDH2	56898	hgsc.bcm.edu	36	4	104222737	104222737	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FABP2	2169	hgsc.bcm.edu	36	4	120460201	120460201	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ETFDH	2110	hgsc.bcm.edu	36	4	159848970	159848970	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FAT1	2195	hgsc.bcm.edu	36	4	187866908	187866908	+	Silent	SNP	A	A	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KCNS3	3790	hgsc.bcm.edu	36	2	17976483	17976483	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
APOB	338	hgsc.bcm.edu	36	2	21086660	21086660	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DNMT3A	1788	hgsc.bcm.edu	36	2	25358787	25358787	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RTN4	57142	hgsc.bcm.edu	36	2	55106195	55106195	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CCDC88A	55704	hgsc.bcm.edu	36	2	55414739	55414739	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
EFEMP1	2202	hgsc.bcm.edu	36	2	55951730	55951730	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ALMS1	7840	hgsc.bcm.edu	36	2	73535871	73535871	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RFX8	0	hgsc.bcm.edu	36	2	101400495	101400495	+	Silent	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TGFBRAP1	9392	hgsc.bcm.edu	36	2	105290939	105290939	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
NCKAP5	0	hgsc.bcm.edu	36	2	133264090	133264090	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PKP4	8502	hgsc.bcm.edu	36	2	159231199	159231199	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
LRP2	4036	hgsc.bcm.edu	36	2	169742768	169742768	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TTN	7273	hgsc.bcm.edu	36	2	179103709	179103709	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TTN	7273	hgsc.bcm.edu	36	2	179349538	179349538	+	Silent	SNP	A	A	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TTN	7273	hgsc.bcm.edu	36	2	179358688	179358688	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TTN	7273	hgsc.bcm.edu	36	2	179373624	179373624	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
COL3A1	1281	hgsc.bcm.edu	36	2	189583826	189583826	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ABI2	10152	hgsc.bcm.edu	36	2	204000200	204000200	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PTH2R	5746	hgsc.bcm.edu	36	2	209015350	209015350	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
MAP2	10988	hgsc.bcm.edu	36	2	210226252	210226252	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ERBB4	2066	hgsc.bcm.edu	36	2	211997187	211997187	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SLC4A3	6508	hgsc.bcm.edu	36	2	220208817	220208817	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
C2orf85	285093	hgsc.bcm.edu	36	2	242462878	242462878	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PTPRD	5789	hgsc.bcm.edu	36	9	8379282	8379282	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TPM2	7169	hgsc.bcm.edu	36	9	35679192	35679192	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
MELK	9833	hgsc.bcm.edu	36	9	36655548	36655548	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
C9orf135	138255	hgsc.bcm.edu	36	9	71661314	71661314	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PTCH1	5727	hgsc.bcm.edu	36	9	97270929	97270929	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
OR13C8	138802	hgsc.bcm.edu	36	9	106372007	106372007	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FKTN	2218	hgsc.bcm.edu	36	9	107409947	107409947	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DFNB31	25861	hgsc.bcm.edu	36	9	116280804	116280804	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RAPGEF1	2889	hgsc.bcm.edu	36	9	133516106	133516106	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
EXD3	54932	hgsc.bcm.edu	36	9	139362351	139362351	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RNF6	6049	hgsc.bcm.edu	36	13	25687647	25687647	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
N4BP2L2	10443	hgsc.bcm.edu	36	13	31993542	31993542	+	Silent	SNP	A	A	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SUCLA2	8803	hgsc.bcm.edu	36	13	47440867	47440867	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TDRD3	81550	hgsc.bcm.edu	36	13	59966604	59966604	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ERCC5	2073	hgsc.bcm.edu	36	13	102313361	102313361	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ARMC4	55130	hgsc.bcm.edu	36	10	28324023	28324023	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RET	5979	hgsc.bcm.edu	36	10	42935010	42935010	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RET	5979	hgsc.bcm.edu	36	10	42937443	42937443	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PRKG1	5592	hgsc.bcm.edu	36	10	53712081	53712081	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PTEN	5728	hgsc.bcm.edu	36	10	89643814	89643814	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
IFIT1	3434	hgsc.bcm.edu	36	10	91153190	91153190	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SORCS3	22986	hgsc.bcm.edu	36	10	106996989	106996989	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
AFAP1L2	84632	hgsc.bcm.edu	36	10	116050310	116050310	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
INPP5F	22876	hgsc.bcm.edu	36	10	121576919	121576919	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PTPRE	5791	hgsc.bcm.edu	36	10	129756388	129756388	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
IRX1	79192	hgsc.bcm.edu	36	5	3652593	3652593	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CARD6	84674	hgsc.bcm.edu	36	5	40888804	40888804	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ENC1	8507	hgsc.bcm.edu	36	5	73966331	73966331	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
GPR98	84059	hgsc.bcm.edu	36	5	90048296	90048296	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RIOK2	55781	hgsc.bcm.edu	36	5	96532797	96532797	+	Silent	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
STARD4	134429	hgsc.bcm.edu	36	5	110865599	110865599	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
APC	324	hgsc.bcm.edu	36	5	112203799	112203799	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DNAJC18	202052	hgsc.bcm.edu	36	5	138801138	138801138	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PCDHB12	56124	hgsc.bcm.edu	36	5	140569489	140569489	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PCDHB15	56121	hgsc.bcm.edu	36	5	140606895	140606895	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PCDHGB3	56102	hgsc.bcm.edu	36	5	140730602	140730602	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
GABRP	2568	hgsc.bcm.edu	36	5	170168252	170168252	+	Silent	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
FLT4	2324	hgsc.bcm.edu	36	5	179978899	179978899	+	Silent	SNP	G	G	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
GNB2L1	10399	hgsc.bcm.edu	36	5	180601244	180601244	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
EP300	2033	hgsc.bcm.edu	36	22	39890001	39890001	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
CHD9	80205	hgsc.bcm.edu	36	16	51859338	51859338	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
ST3GAL6	10402	hgsc.bcm.edu	36	3	99969962	99969962	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
NELL2	4753	hgsc.bcm.edu	36	12	43212629	43212629	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
DCLRE1C	64421	hgsc.bcm.edu	36	10	15018599	15018599	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
C1orf106	55765	hgsc.bcm.edu	36	1	199147329	199147334	+	In_Frame_Del	DEL	ACGCCG	ACGCCG	-	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	ACGCCG	ACGCCG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
PPP1R12B	4660	hgsc.bcm.edu	36	1	200673813	200673813	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
MYL1	4632	hgsc.bcm.edu	36	2	210887962	210887963	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
IHH	3549	hgsc.bcm.edu	36	2	219628649	219628652	+	Frame_Shift_Del	DEL	GCCT	GCCT	-	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	GCCT	GCCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
APC	324	hgsc.bcm.edu	36	5	112203339	112203340	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
SHPRH	257218	hgsc.bcm.edu	36	6	146306584	146306584	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
MUC2	4583	hgsc.bcm.edu	36	11	1082802	1082802	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
TMBIM4	51643	hgsc.bcm.edu	36	12	64818204	64818204	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
RBM38	55544	hgsc.bcm.edu	36	20	55400099	55400100	+	Frame_Shift_Ins	INS	-	-	C	rs11481309	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
KRTAP10-6	386674	hgsc.bcm.edu	36	21	44836060	44836060	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-D5-5540-01A-01D-1650-10	TCGA-D5-5540-10A-01D-1650-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	8091f99b-c55c-41ca-8f84-6302435a12d9	db2b238f-a478-4ea1-954b-5b4de03c5c8f
