Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
DNAH11	8701	hgsc.bcm.edu	36	7	21606828	21606828	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
DNAH11	8701	hgsc.bcm.edu	36	7	21824428	21824428	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
GPR141	353345	hgsc.bcm.edu	36	7	37747315	37747315	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
COL1A2	1278	hgsc.bcm.edu	36	7	93892467	93892467	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
RELN	5649	hgsc.bcm.edu	36	7	102900524	102900524	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
SLC26A4	5172	hgsc.bcm.edu	36	7	107137775	107137775	+	Silent	SNP	C	C	T	rs17154347	byCluster;byFrequency;byHapMap	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PTPRZ1	5803	hgsc.bcm.edu	36	7	121439515	121439515	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
AASS	10157	hgsc.bcm.edu	36	7	121545713	121545713	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
NCOA6	23054	hgsc.bcm.edu	36	20	32801694	32801694	+	Silent	SNP	A	A	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CEP250	11190	hgsc.bcm.edu	36	20	33517036	33517036	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ERGIC3	51614	hgsc.bcm.edu	36	20	33608168	33608168	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
NCOA3	8202	hgsc.bcm.edu	36	20	45697856	45697856	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
OR11G2	390439	hgsc.bcm.edu	36	14	19735810	19735810	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
C14orf39	317761	hgsc.bcm.edu	36	14	59973447	59973447	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MUC16	94025	hgsc.bcm.edu	36	19	8944354	8944354	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ZNF700	90592	hgsc.bcm.edu	36	19	11921707	11921707	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
TNPO2	30000	hgsc.bcm.edu	36	19	12673442	12673442	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ZNF569	148266	hgsc.bcm.edu	36	19	42595489	42595489	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
FOXA3	3171	hgsc.bcm.edu	36	19	51068146	51068146	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
GYS1	2997	hgsc.bcm.edu	36	19	54164506	54164506	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
USP17L2	0	hgsc.bcm.edu	36	8	12032583	12032583	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MYST3	7994	hgsc.bcm.edu	36	8	41951494	41951494	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
RB1CC1	9821	hgsc.bcm.edu	36	8	53717637	53717637	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
XKR4	114786	hgsc.bcm.edu	36	8	56432820	56432820	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
NCOA2	10499	hgsc.bcm.edu	36	8	71238276	71238276	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CDH17	1015	hgsc.bcm.edu	36	8	95258000	95258000	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
RAD54B	25788	hgsc.bcm.edu	36	8	95489072	95489072	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PLEC	0	hgsc.bcm.edu	36	8	145068337	145068337	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ERRFI1	54206	hgsc.bcm.edu	36	1	7997991	7997991	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CROCC	9696	hgsc.bcm.edu	36	1	17129563	17129563	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ZMYM6	9204	hgsc.bcm.edu	36	1	35225493	35225493	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CLSPN	63967	hgsc.bcm.edu	36	1	35998743	35998743	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ZSWIM5	57643	hgsc.bcm.edu	36	1	45298367	45298367	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
HOOK1	51361	hgsc.bcm.edu	36	1	60096729	60096729	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MIER1	57708	hgsc.bcm.edu	36	1	67184456	67184456	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MCOLN3	55283	hgsc.bcm.edu	36	1	85259408	85259408	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
FAM46C	54855	hgsc.bcm.edu	36	1	117967959	117967959	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
SV2A	9900	hgsc.bcm.edu	36	1	148151592	148151592	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
IVL	3713	hgsc.bcm.edu	36	1	151149712	151149712	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
TNN	63923	hgsc.bcm.edu	36	1	173333176	173333176	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
TNR	7143	hgsc.bcm.edu	36	1	173642273	173642273	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PPFIA4	8497	hgsc.bcm.edu	36	1	201304217	201304217	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CR1	1378	hgsc.bcm.edu	36	1	205807860	205807860	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MPPED2	744	hgsc.bcm.edu	36	11	30392403	30392403	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
BEST1	7439	hgsc.bcm.edu	36	11	61482304	61482304	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
SPTBN2	6712	hgsc.bcm.edu	36	11	66234767	66234767	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
P2RY6	5031	hgsc.bcm.edu	36	11	72686193	72686193	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ATM	472	hgsc.bcm.edu	36	11	107704991	107704991	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
USP28	57646	hgsc.bcm.edu	36	11	113188247	113188247	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CBL	867	hgsc.bcm.edu	36	11	118650863	118650863	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
TNXB	7148	hgsc.bcm.edu	36	6	32149526	32149526	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
COL11A2	1302	hgsc.bcm.edu	36	6	33254099	33254099	+	Silent	SNP	G	G	A	rs41266697	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ITPR3	3710	hgsc.bcm.edu	36	6	33752653	33752653	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
COL21A1	81578	hgsc.bcm.edu	36	6	56143453	56143453	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
EYS	346007	hgsc.bcm.edu	36	6	65679145	65679145	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
EYS	346007	hgsc.bcm.edu	36	6	65679158	65679158	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
COL19A1	1310	hgsc.bcm.edu	36	6	70956768	70956768	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KPNA5	3841	hgsc.bcm.edu	36	6	117152187	117152187	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
FNDC1	84624	hgsc.bcm.edu	36	6	159572950	159572950	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
C6orf70	55780	hgsc.bcm.edu	36	6	169923520	169923520	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
TP53	7157	hgsc.bcm.edu	36	17	7517810	7517810	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KCNJ12	3768	hgsc.bcm.edu	36	17	21260314	21260314	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
GGNBP2	79893	hgsc.bcm.edu	36	17	32011889	32011889	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KRT14	3861	hgsc.bcm.edu	36	17	36993339	36993339	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KIF2B	84643	hgsc.bcm.edu	36	17	49256303	49256303	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
NOL11	25926	hgsc.bcm.edu	36	17	63148006	63148006	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
HEXDC	284004	hgsc.bcm.edu	36	17	77986887	77986887	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
C17orf62	79415	hgsc.bcm.edu	36	17	77997082	77997082	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MSLNL	401827	hgsc.bcm.edu	36	16	770434	770434	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MSLNL	401827	hgsc.bcm.edu	36	16	770603	770603	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CDH5	1003	hgsc.bcm.edu	36	16	64970834	64970834	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CDH1	51343	hgsc.bcm.edu	36	16	67403600	67403600	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CACNA2D3	55799	hgsc.bcm.edu	36	3	54880687	54880687	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
OR5H6	79295	hgsc.bcm.edu	36	3	99466472	99466472	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PLD1	5589	hgsc.bcm.edu	36	3	172936028	172936028	+	Silent	SNP	T	T	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
LRRC15	131578	hgsc.bcm.edu	36	3	195562153	195562153	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ANO2	57101	hgsc.bcm.edu	36	12	5557916	5557916	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ZNF384	171017	hgsc.bcm.edu	36	12	6657607	6657607	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
GRIN2B	2904	hgsc.bcm.edu	36	12	13616076	13616076	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
C12orf60	144608	hgsc.bcm.edu	36	12	14867397	14867397	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KRAS	3845	hgsc.bcm.edu	36	12	25289551	25289551	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
FAM186A	121006	hgsc.bcm.edu	36	12	49030432	49030432	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
LARP4	113251	hgsc.bcm.edu	36	12	49155582	49155582	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ATF1	2668	hgsc.bcm.edu	36	12	49499695	49499695	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
OR6C1	390321	hgsc.bcm.edu	36	12	54001155	54001155	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ATP5B	506	hgsc.bcm.edu	36	12	55322591	55322591	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
GABRB3	2562	hgsc.bcm.edu	36	15	24417723	24417723	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
DMXL2	23312	hgsc.bcm.edu	36	15	49616266	49616266	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
SCAPER	49855	hgsc.bcm.edu	36	15	74844369	74844369	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
NLGN4X	57502	hgsc.bcm.edu	36	X	5821015	5821015	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
BEND2	139105	hgsc.bcm.edu	36	X	18144654	18144654	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
RPS6KA3	6197	hgsc.bcm.edu	36	X	20100891	20100891	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
IL1RAPL1	11141	hgsc.bcm.edu	36	X	29882676	29882676	+	Nonsense_Mutation	SNP	A	A	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KDM6A	7403	hgsc.bcm.edu	36	X	44835012	44835012	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
USP11	8237	hgsc.bcm.edu	36	X	46989218	46989218	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
SHROOM4	57477	hgsc.bcm.edu	36	X	50367589	50367589	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
FGD1	2245	hgsc.bcm.edu	36	X	54489431	54489431	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ARR3	407	hgsc.bcm.edu	36	X	69412834	69412834	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
SLC7A3	84889	hgsc.bcm.edu	36	X	70066553	70066553	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
TAF1	6872	hgsc.bcm.edu	36	X	70520544	70520544	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CYLC1	1538	hgsc.bcm.edu	36	X	83015560	83015560	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MUM1L1	139221	hgsc.bcm.edu	36	X	105337358	105337358	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PAK3	8874	hgsc.bcm.edu	36	X	110292819	110292819	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CUL4B	8450	hgsc.bcm.edu	36	X	119552419	119552419	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
SLC25A14	9016	hgsc.bcm.edu	36	X	129310991	129310991	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MAP7D3	79649	hgsc.bcm.edu	36	X	135130618	135130618	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
GPR112	139378	hgsc.bcm.edu	36	X	135257593	135257593	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MCF2	4168	hgsc.bcm.edu	36	X	138524741	138524741	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
DUSP9	1852	hgsc.bcm.edu	36	X	152568777	152568777	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PSAPL1	768239	hgsc.bcm.edu	36	4	7486844	7486844	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KIT	3815	hgsc.bcm.edu	36	4	55286960	55286960	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KIT	3815	hgsc.bcm.edu	36	4	55288188	55288188	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KIT	3815	hgsc.bcm.edu	36	4	55290357	55290357	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
FAM175A	84142	hgsc.bcm.edu	36	4	84602776	84602776	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
USP53	54532	hgsc.bcm.edu	36	4	120408929	120408929	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
OTOF	9381	hgsc.bcm.edu	36	2	26558827	26558827	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PPM1B	5495	hgsc.bcm.edu	36	2	44282476	44282476	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
AAK1	22848	hgsc.bcm.edu	36	2	69605686	69605686	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
TMEM131	23505	hgsc.bcm.edu	36	2	97780330	97780330	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
IL18RAP	8807	hgsc.bcm.edu	36	2	102426176	102426176	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
TSN	7247	hgsc.bcm.edu	36	2	122237103	122237103	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
YSK4	80122	hgsc.bcm.edu	36	2	135455302	135455302	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
SPOPL	339745	hgsc.bcm.edu	36	2	139025071	139025071	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
LRP1B	53353	hgsc.bcm.edu	36	2	141287764	141287764	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KCNH7	90134	hgsc.bcm.edu	36	2	163401402	163401402	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CSRNP3	80034	hgsc.bcm.edu	36	2	166241181	166241181	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
TTC21B	79809	hgsc.bcm.edu	36	2	166478346	166478346	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
TTN	7273	hgsc.bcm.edu	36	2	179178103	179178103	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
FAM171B	165215	hgsc.bcm.edu	36	2	187324231	187324231	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PIKFYVE	200576	hgsc.bcm.edu	36	2	208923024	208923024	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
COL6A3	1293	hgsc.bcm.edu	36	2	237961059	237961059	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PTPRD	5789	hgsc.bcm.edu	36	9	8331109	8331109	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
DAPK1	1612	hgsc.bcm.edu	36	9	89501871	89501871	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CTSL1	1514	hgsc.bcm.edu	36	9	89532445	89532445	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
RGS3	5998	hgsc.bcm.edu	36	9	115264276	115264276	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
FLT1	2321	hgsc.bcm.edu	36	13	27877999	27877999	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
BRCA2	675	hgsc.bcm.edu	36	13	31870721	31870721	+	Silent	SNP	A	A	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
N4BP2L1	90634	hgsc.bcm.edu	36	13	31876397	31876397	+	Silent	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
SPRY2	10253	hgsc.bcm.edu	36	13	79809656	79809656	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
APBB1IP	54518	hgsc.bcm.edu	36	10	26870560	26870560	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ANKRD30A	91074	hgsc.bcm.edu	36	10	37471021	37471021	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PTEN	5728	hgsc.bcm.edu	36	10	89710689	89710689	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PTEN	5728	hgsc.bcm.edu	36	10	89710854	89710854	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
C10orf79	80217	hgsc.bcm.edu	36	10	105910855	105910855	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
GSTO2	119391	hgsc.bcm.edu	36	10	106047396	106047396	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
NRAP	65083	hgsc.bcm.edu	36	10	115381301	115381301	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PTPRE	5791	hgsc.bcm.edu	36	10	129756508	129756508	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
DNAH5	1767	hgsc.bcm.edu	36	5	13938260	13938260	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
FAM134B	54463	hgsc.bcm.edu	36	5	16531974	16531974	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
NIPBL	25836	hgsc.bcm.edu	36	5	37062132	37062132	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
RASGRF2	5924	hgsc.bcm.edu	36	5	80402130	80402130	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
VCAN	1462	hgsc.bcm.edu	36	5	82871992	82871992	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
APC	324	hgsc.bcm.edu	36	5	112190731	112190731	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
APC	324	hgsc.bcm.edu	36	5	112192486	112192486	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
APC	324	hgsc.bcm.edu	36	5	112201603	112201603	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PCDHA11	56138	hgsc.bcm.edu	36	5	140231100	140231100	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PCDHA12	56137	hgsc.bcm.edu	36	5	140236851	140236851	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PCDHB6	56130	hgsc.bcm.edu	36	5	140510322	140510322	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PCDHB13	56123	hgsc.bcm.edu	36	5	140575941	140575941	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KCNIP1	30820	hgsc.bcm.edu	36	5	169713536	169713536	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
FAM153B	202134	hgsc.bcm.edu	36	5	175452854	175452854	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CLDN10	9071	hgsc.bcm.edu	36	13	95003230	95003230	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
SPATA3	130560	hgsc.bcm.edu	36	2	231569277	231569303	+	In_Frame_Del	DEL	CAGCAGCCTAGCCCTGAATCCACACCA	CAGCAGCCTAGCCCTGAATCCACACCA	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	CAGCAGCCTAGCCCTGAATCCACACCA	CAGCAGCCTAGCCCTGAATCCACACCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ZNF717	100131827	hgsc.bcm.edu	36	3	75868725	75868726	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
ZNF717	100131827	hgsc.bcm.edu	36	3	75869005	75869013	+	In_Frame_Del	DEL	CTACATTCT	CTACATTCT	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	CTACATTCT	CTACATTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
GTPBP8	29083	hgsc.bcm.edu	36	3	114194617	114194620	+	Frame_Shift_Del	DEL	TTTT	TTTT	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	TTTT	TTTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MUC4	4585	hgsc.bcm.edu	36	3	196990687	196990734	+	In_Frame_Del	DEL	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
MUC4	4585	hgsc.bcm.edu	36	3	196999393	196999440	+	In_Frame_Del	DEL	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA	GGTGGTGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
APC	324	hgsc.bcm.edu	36	5	112203546	112203546	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
HAVCR2	84868	hgsc.bcm.edu	36	5	156466334	156466334	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
RARS	5917	hgsc.bcm.edu	36	5	167853529	167853532	+	Frame_Shift_Del	DEL	TTAC	TTAC	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	TTAC	TTAC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
PPP1R10	5514	hgsc.bcm.edu	36	6	30680774	30680774	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
SLC22A1	6580	hgsc.bcm.edu	36	6	160480888	160480895	+	In_Frame_Del	DEL	TGGTAAGT	TGGTAAGT	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	TGGTAAGT	TGGTAAGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
GPRIN2	9721	hgsc.bcm.edu	36	10	46419597	46419598	+	In_Frame_Ins	INS	-	-	ATGAGGGAG	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CASP5	838	hgsc.bcm.edu	36	11	104384897	104384897	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
DDHD1	80821	hgsc.bcm.edu	36	14	52689230	52689231	+	In_Frame_Ins	INS	-	-	GCCGCC	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
KRTAP4-1	85285	hgsc.bcm.edu	36	17	36594322	36594378	+	Frame_Shift_Del	DEL	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CCR10	51554	hgsc.bcm.edu	36	17	38085147	38085147	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
TMUB2	79089	hgsc.bcm.edu	36	17	39623508	39623508	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
CHD6	84181	hgsc.bcm.edu	36	20	39466808	39466808	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-DM-A28E-01A-11D-A16V-10	TCGA-DM-A28E-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	c06ae2fa-8943-4b53-b8bd-002787b4534c	a26c1fdf-e5b2-430c-b059-c1da7d177354
