Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
SDK1	221935	hgsc.bcm.edu	36	7	4248025	4248025	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TWISTNB	221830	hgsc.bcm.edu	36	7	19704534	19704534	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RAPGEF5	9771	hgsc.bcm.edu	36	7	22151226	22151226	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GPNMB	10457	hgsc.bcm.edu	36	7	23263167	23263167	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FKBP9	11328	hgsc.bcm.edu	36	7	32994757	32994757	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ANLN	54443	hgsc.bcm.edu	36	7	36413874	36413874	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
HECW1	23072	hgsc.bcm.edu	36	7	43558454	43558454	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
COBL	23242	hgsc.bcm.edu	36	7	51063353	51063353	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZNF479	90827	hgsc.bcm.edu	36	7	57192565	57192565	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GTF2IRD1	9569	hgsc.bcm.edu	36	7	73643183	73643183	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CYP3A7	1551	hgsc.bcm.edu	36	7	99151464	99151464	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MUC17	140453	hgsc.bcm.edu	36	7	100465125	100465125	+	Silent	SNP	T	T	C	rs4729648	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MUC17	140453	hgsc.bcm.edu	36	7	100465127	100465127	+	Missense_Mutation	SNP	G	G	A	rs4729649	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NRCAM	4897	hgsc.bcm.edu	36	7	107577795	107577795	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MET	8731	hgsc.bcm.edu	36	7	116210692	116210692	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
C7orf58	79974	hgsc.bcm.edu	36	7	120555706	120555706	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PODXL	5420	hgsc.bcm.edu	36	7	130839717	130839717	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
EZH2	2146	hgsc.bcm.edu	36	7	148137366	148137366	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TMEM176A	55365	hgsc.bcm.edu	36	7	150130293	150130293	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CST7	8530	hgsc.bcm.edu	36	20	24887567	24887567	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
C20orf152	140894	hgsc.bcm.edu	36	20	34081955	34081955	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CTSA	5476	hgsc.bcm.edu	36	20	43954821	43954821	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SPATA2	9825	hgsc.bcm.edu	36	20	47955967	47955967	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZNF217	7764	hgsc.bcm.edu	36	20	51626759	51626759	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
AURKA	6790	hgsc.bcm.edu	36	20	54378640	54378640	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
AURKA	6790	hgsc.bcm.edu	36	20	54378750	54378750	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CASS4	57091	hgsc.bcm.edu	36	20	54460847	54460847	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MTMR3	8897	hgsc.bcm.edu	36	22	28746522	28746522	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SEC14L2	23541	hgsc.bcm.edu	36	22	29142043	29142043	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TMPRSS6	164656	hgsc.bcm.edu	36	22	35815759	35815759	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FOXG1	2290	hgsc.bcm.edu	36	14	28306965	28306965	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MDGA2	161357	hgsc.bcm.edu	36	14	46600366	46600366	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RDH11	51109	hgsc.bcm.edu	36	14	67214891	67214891	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZFYVE26	23503	hgsc.bcm.edu	36	14	67302874	67302874	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TTLL5	254173	hgsc.bcm.edu	36	14	75281649	75281649	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TSHR	7253	hgsc.bcm.edu	36	14	80679161	80679161	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FLRT2	23768	hgsc.bcm.edu	36	14	85157746	85157746	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PPAP2C	8612	hgsc.bcm.edu	36	19	233753	233753	+	Missense_Mutation	SNP	G	G	A	rs1138439	byCluster	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PCSK4	54760	hgsc.bcm.edu	36	19	1438198	1438198	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
OR7D2	162998	hgsc.bcm.edu	36	19	9158067	9158067	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
BRD4	23476	hgsc.bcm.edu	36	19	15237429	15237429	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
JAK3	3718	hgsc.bcm.edu	36	19	17808998	17808998	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TSHZ3	57616	hgsc.bcm.edu	36	19	36460125	36460125	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TSHZ3	57616	hgsc.bcm.edu	36	19	36460241	36460241	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CEACAM6	4680	hgsc.bcm.edu	36	19	46957129	46957129	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SPHK2	56848	hgsc.bcm.edu	36	19	53823923	53823923	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SIGLEC5	8778	hgsc.bcm.edu	36	19	56824110	56824110	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZNF600	162966	hgsc.bcm.edu	36	19	57961970	57961970	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DPRX	503834	hgsc.bcm.edu	36	19	58831815	58831815	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KIR2DL3	3804	hgsc.bcm.edu	36	19	59947247	59947247	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
USP29	57663	hgsc.bcm.edu	36	19	62334011	62334011	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZNF551	90233	hgsc.bcm.edu	36	19	62891400	62891400	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
HMBOX1	79618	hgsc.bcm.edu	36	8	28932302	28932302	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FGFR1	2260	hgsc.bcm.edu	36	8	38405094	38405094	+	Silent	SNP	C	C	T	rs17182296	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PRKDC	5591	hgsc.bcm.edu	36	8	48909311	48909311	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PRKDC	5591	hgsc.bcm.edu	36	8	48956613	48956613	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NSMAF	8439	hgsc.bcm.edu	36	8	59674933	59674933	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TRIM55	84675	hgsc.bcm.edu	36	8	67224579	67224579	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CSPP1	79848	hgsc.bcm.edu	36	8	68233900	68233900	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NCOA2	10499	hgsc.bcm.edu	36	8	71231744	71231744	+	Silent	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZFHX4	79776	hgsc.bcm.edu	36	8	77927236	77927236	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RAD54B	25788	hgsc.bcm.edu	36	8	95539771	95539771	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
UBR5	51366	hgsc.bcm.edu	36	8	103361860	103361860	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RSPO2	340419	hgsc.bcm.edu	36	8	109039658	109039658	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TMEM74	157753	hgsc.bcm.edu	36	8	109866213	109866213	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CSMD3	114788	hgsc.bcm.edu	36	8	113386130	113386130	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CSMD3	114788	hgsc.bcm.edu	36	8	113574059	113574059	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FAM135B	51059	hgsc.bcm.edu	36	8	139234485	139234485	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ARHGAP39	0	hgsc.bcm.edu	36	8	145741634	145741634	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CA6	765	hgsc.bcm.edu	36	1	8941640	8941640	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MTHFR	4524	hgsc.bcm.edu	36	1	11777147	11777147	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZBTB17	7709	hgsc.bcm.edu	36	1	16144125	16144125	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RHD	6007	hgsc.bcm.edu	36	1	25500625	25500625	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TMEM69	51249	hgsc.bcm.edu	36	1	45932006	45932006	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TXNDC12	51060	hgsc.bcm.edu	36	1	52259249	52259249	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
C1orf168	199920	hgsc.bcm.edu	36	1	56961914	56961914	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FPGT-TNNI3K	0	hgsc.bcm.edu	36	1	74509927	74509927	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CLCA2	9635	hgsc.bcm.edu	36	1	86669183	86669183	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZNF644	84146	hgsc.bcm.edu	36	1	91179341	91179341	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
S1PR1	1901	hgsc.bcm.edu	36	1	101477551	101477551	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
COL11A1	1301	hgsc.bcm.edu	36	1	103119907	103119907	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
AMPD2	271	hgsc.bcm.edu	36	1	109975185	109975185	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PTPN22	26191	hgsc.bcm.edu	36	1	114203210	114203210	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
VANGL1	81839	hgsc.bcm.edu	36	1	116008234	116008234	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
IGSF3	3321	hgsc.bcm.edu	36	1	116944453	116944453	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SPAG17	200162	hgsc.bcm.edu	36	1	118445921	118445921	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DENND4B	9909	hgsc.bcm.edu	36	1	152181334	152181334	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NUP210L	91181	hgsc.bcm.edu	36	1	152285218	152285218	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SLC9A11	284525	hgsc.bcm.edu	36	1	171771680	171771680	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
HMCN1	83872	hgsc.bcm.edu	36	1	184326562	184326562	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TPR	7175	hgsc.bcm.edu	36	1	184586124	184586124	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KDM5B	10765	hgsc.bcm.edu	36	1	200965651	200965651	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NFASC	23114	hgsc.bcm.edu	36	1	203204050	203204050	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DYRK3	8444	hgsc.bcm.edu	36	1	204888774	204888774	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SLC30A1	7779	hgsc.bcm.edu	36	1	209818549	209818549	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MARK1	4139	hgsc.bcm.edu	36	1	218858420	218858420	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PLD5	200150	hgsc.bcm.edu	36	1	240343935	240343935	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TRIM58	25893	hgsc.bcm.edu	36	1	246106325	246106325	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
OR52D1	390066	hgsc.bcm.edu	36	11	5466583	5466583	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CYP2R1	120227	hgsc.bcm.edu	36	11	14858845	14858845	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
OR5M9	390162	hgsc.bcm.edu	36	11	55986781	55986781	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
OR9Q2	219957	hgsc.bcm.edu	36	11	57714752	57714752	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FAM111A	63901	hgsc.bcm.edu	36	11	58677424	58677424	+	Silent	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RTN3	10313	hgsc.bcm.edu	36	11	63244903	63244903	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SF1	7536	hgsc.bcm.edu	36	11	64300622	64300622	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
LRRC32	2615	hgsc.bcm.edu	36	11	76048445	76048445	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PAK1	5585	hgsc.bcm.edu	36	11	76732561	76732561	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CNTN5	53942	hgsc.bcm.edu	36	11	99221094	99221094	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DYNC2H1	79659	hgsc.bcm.edu	36	11	102531340	102531340	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ATM	472	hgsc.bcm.edu	36	11	107628761	107628761	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ATM	472	hgsc.bcm.edu	36	11	107665663	107665663	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
OR8G2	26492	hgsc.bcm.edu	36	11	123600723	123600723	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ACRV1	56	hgsc.bcm.edu	36	11	125053108	125053108	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
IGSF9B	22997	hgsc.bcm.edu	36	11	133295323	133295323	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NUDT3	11165	hgsc.bcm.edu	36	6	34417640	34417640	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FTSJD2	23070	hgsc.bcm.edu	36	6	37526033	37526033	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GPR115	221393	hgsc.bcm.edu	36	6	47790221	47790221	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
VNN1	8876	hgsc.bcm.edu	36	6	133055109	133055109	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZBTB2	57621	hgsc.bcm.edu	36	6	151729554	151729554	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RSPH3	83861	hgsc.bcm.edu	36	6	159321911	159321911	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
IGF2R	3482	hgsc.bcm.edu	36	6	160402852	160402852	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TP53	7157	hgsc.bcm.edu	36	17	7519131	7519131	+	Missense_Mutation	SNP	C	C	T	rs28934578	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NF1	4763	hgsc.bcm.edu	36	17	26584209	26584209	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
UTP6	55813	hgsc.bcm.edu	36	17	27226509	27226509	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MLLT6	4302	hgsc.bcm.edu	36	17	34127731	34127731	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KRT33B	3884	hgsc.bcm.edu	36	17	36774745	36774745	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GRN	2896	hgsc.bcm.edu	36	17	39782621	39782621	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MTMR4	9110	hgsc.bcm.edu	36	17	53924889	53924889	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NACA2	342538	hgsc.bcm.edu	36	17	57023094	57023094	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ABCA9	10350	hgsc.bcm.edu	36	17	64558770	64558770	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
UTS2R	2837	hgsc.bcm.edu	36	17	77925813	77925813	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KRTAP13-3	337960	hgsc.bcm.edu	36	21	30719958	30719958	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RUNX1	861	hgsc.bcm.edu	36	21	35153703	35153703	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RUNX1	861	hgsc.bcm.edu	36	21	35153732	35153732	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DOPEY2	9980	hgsc.bcm.edu	36	21	36531449	36531449	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PCP4	5121	hgsc.bcm.edu	36	21	40222846	40222846	+	Silent	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PRMT2	3275	hgsc.bcm.edu	36	21	46881318	46881318	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CREBBP	1387	hgsc.bcm.edu	36	16	3747903	3747903	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ACSM2B	348158	hgsc.bcm.edu	36	16	20461788	20461788	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SLC5A11	115584	hgsc.bcm.edu	36	16	24809842	24809842	+	Silent	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PHKB	5257	hgsc.bcm.edu	36	16	46106942	46106942	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CHD9	80205	hgsc.bcm.edu	36	16	51800928	51800928	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CDH8	1006	hgsc.bcm.edu	36	16	60245477	60245477	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RANBP10	57610	hgsc.bcm.edu	36	16	66322892	66322892	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
JPH3	57338	hgsc.bcm.edu	36	16	86287699	86287699	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SLC14A1	6563	hgsc.bcm.edu	36	18	41561265	41561265	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SMAD4	4089	hgsc.bcm.edu	36	18	46858785	46858785	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ATP8B1	5205	hgsc.bcm.edu	36	18	53512892	53512892	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZNF236	7776	hgsc.bcm.edu	36	18	72692787	72692787	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
IL17RC	84818	hgsc.bcm.edu	36	3	9945273	9945273	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
VHL	7428	hgsc.bcm.edu	36	3	10166628	10166628	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RAF1	5894	hgsc.bcm.edu	36	3	12620699	12620699	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KAT2B	8850	hgsc.bcm.edu	36	3	20111786	20111786	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SNRK	54861	hgsc.bcm.edu	36	3	43356979	43356979	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NEK4	6787	hgsc.bcm.edu	36	3	52752474	52752474	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
EPHA6	285220	hgsc.bcm.edu	36	3	98733964	98733964	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TMEM45A	55076	hgsc.bcm.edu	36	3	101770433	101770433	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PHLDB2	90102	hgsc.bcm.edu	36	3	113176056	113176056	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DRD3	1814	hgsc.bcm.edu	36	3	115332899	115332899	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GPR156	165829	hgsc.bcm.edu	36	3	121369460	121369460	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MYLK	4638	hgsc.bcm.edu	36	3	124867776	124867776	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KALRN	8997	hgsc.bcm.edu	36	3	125834107	125834107	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
XRN1	54464	hgsc.bcm.edu	36	3	143623025	143623025	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
P2RY13	53829	hgsc.bcm.edu	36	3	152528598	152528598	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NLGN1	22871	hgsc.bcm.edu	36	3	175479805	175479805	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PIK3CA	5290	hgsc.bcm.edu	36	3	180418711	180418711	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PIK3CA	5290	hgsc.bcm.edu	36	3	180418744	180418744	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DGKG	1608	hgsc.bcm.edu	36	3	187480420	187480420	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MUC4	4585	hgsc.bcm.edu	36	3	196995513	196995513	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CD163L1	283316	hgsc.bcm.edu	36	12	7422921	7422921	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TAS2R13	50838	hgsc.bcm.edu	36	12	10952465	10952465	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KRAS	3845	hgsc.bcm.edu	36	12	25289526	25289526	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KRAS	3845	hgsc.bcm.edu	36	12	25289563	25289563	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KRT84	3890	hgsc.bcm.edu	36	12	51058141	51058141	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
OR6C68	403284	hgsc.bcm.edu	36	12	54173202	54173202	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DDIT3	1649	hgsc.bcm.edu	36	12	56197352	56197352	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CCT2	10576	hgsc.bcm.edu	36	12	68277318	68277318	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MTERFD3	80298	hgsc.bcm.edu	36	12	105896211	105896211	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
LHX5	64211	hgsc.bcm.edu	36	12	112389487	112389487	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RFC5	5985	hgsc.bcm.edu	36	12	116948016	116948016	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
P2RX7	5027	hgsc.bcm.edu	36	12	120055231	120055231	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
C15orf2	23742	hgsc.bcm.edu	36	15	22473302	22473302	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SLC12A6	9990	hgsc.bcm.edu	36	15	32316304	32316304	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
INO80	54617	hgsc.bcm.edu	36	15	39171602	39171602	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NDUFAF1	51103	hgsc.bcm.edu	36	15	39474476	39474476	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TTBK2	146057	hgsc.bcm.edu	36	15	40832482	40832482	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TRPM7	54822	hgsc.bcm.edu	36	15	48728231	48728231	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MYO5A	4644	hgsc.bcm.edu	36	15	50454824	50454824	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TCF12	6938	hgsc.bcm.edu	36	15	55330883	55330883	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
VPS13C	54832	hgsc.bcm.edu	36	15	60048896	60048896	+	Silent	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
VPS13C	54832	hgsc.bcm.edu	36	15	60086945	60086945	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
AP3B2	8120	hgsc.bcm.edu	36	15	81130228	81130228	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
BTBD1	53339	hgsc.bcm.edu	36	15	81516181	81516181	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RGMA	56963	hgsc.bcm.edu	36	15	91389741	91389741	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FRMPD4	9758	hgsc.bcm.edu	36	X	12426820	12426820	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RPS6KA3	6197	hgsc.bcm.edu	36	X	20095781	20095781	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GPR34	2857	hgsc.bcm.edu	36	X	41440777	41440777	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
AKAP4	8852	hgsc.bcm.edu	36	X	49844433	49844433	+	Silent	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
XAGE5	170627	hgsc.bcm.edu	36	X	52860879	52860879	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
HEPH	9843	hgsc.bcm.edu	36	X	65403177	65403177	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
AR	374	hgsc.bcm.edu	36	X	66681883	66681883	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KIAA2022	340533	hgsc.bcm.edu	36	X	73882146	73882146	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZDHHC15	158866	hgsc.bcm.edu	36	X	74615462	74615462	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RPS6KA6	27330	hgsc.bcm.edu	36	X	83247515	83247515	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DIAPH2	1730	hgsc.bcm.edu	36	X	96283423	96283423	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ZMAT1	84460	hgsc.bcm.edu	36	X	101025268	101025268	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TBC1D8B	54885	hgsc.bcm.edu	36	X	105950875	105950875	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
IL13RA2	3598	hgsc.bcm.edu	36	X	114151552	114151552	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
WDR44	54521	hgsc.bcm.edu	36	X	117410643	117410643	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
UTP14A	10813	hgsc.bcm.edu	36	X	128882167	128882167	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
BCORL1	63035	hgsc.bcm.edu	36	X	128984615	128984615	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
HTT	6532	hgsc.bcm.edu	36	4	3098818	3098818	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PROM1	8842	hgsc.bcm.edu	36	4	15602001	15602001	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PGM2	55276	hgsc.bcm.edu	36	4	37528248	37528248	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TLR10	81793	hgsc.bcm.edu	36	4	38452778	38452778	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
WDR19	57728	hgsc.bcm.edu	36	4	38883205	38883205	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CHRNA9	55584	hgsc.bcm.edu	36	4	40045926	40045926	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
YIPF7	285525	hgsc.bcm.edu	36	4	44332697	44332697	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ATP10D	57205	hgsc.bcm.edu	36	4	47232703	47232703	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
UGT2A3	79799	hgsc.bcm.edu	36	4	69851681	69851681	+	Silent	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ODAM	54959	hgsc.bcm.edu	36	4	71098918	71098918	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DSPP	1834	hgsc.bcm.edu	36	4	88756150	88756150	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
HSPA4L	22824	hgsc.bcm.edu	36	4	128948630	128948630	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SMARCA5	8467	hgsc.bcm.edu	36	4	144665007	144665007	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GYPA	2993	hgsc.bcm.edu	36	4	145257477	145257477	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FBXW7	55294	hgsc.bcm.edu	36	4	153464896	153464896	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NAF1	92345	hgsc.bcm.edu	36	4	164286455	164286455	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ADAM29	11086	hgsc.bcm.edu	36	4	176134431	176134431	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NEIL3	55247	hgsc.bcm.edu	36	4	178520446	178520446	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ALK	238	hgsc.bcm.edu	36	2	29290395	29290395	+	Silent	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MAP4K3	8491	hgsc.bcm.edu	36	2	39406826	39406826	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MSH2	4436	hgsc.bcm.edu	36	2	47510525	47510525	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MSH6	2956	hgsc.bcm.edu	36	2	47871730	47871730	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GTF2A1L	11036	hgsc.bcm.edu	36	2	48727207	48727207	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
EML6	400954	hgsc.bcm.edu	36	2	55029537	55029537	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
EHBP1	23301	hgsc.bcm.edu	36	2	62955064	62955064	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
APLF	200558	hgsc.bcm.edu	36	2	68618673	68618673	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
POLR1A	25885	hgsc.bcm.edu	36	2	86127895	86127895	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KRCC1	51315	hgsc.bcm.edu	36	2	88108971	88108971	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TEKT4	150483	hgsc.bcm.edu	36	2	94903501	94903501	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
AFF3	3899	hgsc.bcm.edu	36	2	99541780	99541780	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
AFF3	3899	hgsc.bcm.edu	36	2	99570163	99570163	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MFSD9	84804	hgsc.bcm.edu	36	2	102715291	102715291	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PAX8	7849	hgsc.bcm.edu	36	2	113709478	113709478	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
LRP1B	53353	hgsc.bcm.edu	36	2	141360255	141360255	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ABCB11	8647	hgsc.bcm.edu	36	2	169533190	169533190	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
LRP2	4036	hgsc.bcm.edu	36	2	169776840	169776840	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
HNRNPA3	220988	hgsc.bcm.edu	36	2	177790722	177790722	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
AGPS	8540	hgsc.bcm.edu	36	2	178072682	178072682	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TTN	7273	hgsc.bcm.edu	36	2	179143639	179143639	+	Silent	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TTN	7273	hgsc.bcm.edu	36	2	179312381	179312381	+	Silent	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
STRADB	55437	hgsc.bcm.edu	36	2	202048626	202048626	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PIKFYVE	200576	hgsc.bcm.edu	36	2	208924331	208924331	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
UNC80	285175	hgsc.bcm.edu	36	2	210527098	210527098	+	Nonsense_Mutation	SNP	T	T	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ERBB4	2066	hgsc.bcm.edu	36	2	212520401	212520401	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
XRCC5	7520	hgsc.bcm.edu	36	2	216711147	216711147	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FARSB	10056	hgsc.bcm.edu	36	2	223206189	223206189	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
NCL	4691	hgsc.bcm.edu	36	2	232028561	232028561	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GIGYF2	26058	hgsc.bcm.edu	36	2	233369148	233369148	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MPDZ	84708	hgsc.bcm.edu	36	9	13109558	13109558	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SECISBP2	79048	hgsc.bcm.edu	36	9	91130307	91130307	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RNF20	56254	hgsc.bcm.edu	36	9	103362964	103362964	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
OR13F1	138805	hgsc.bcm.edu	36	9	106306395	106306395	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PAPPA	5069	hgsc.bcm.edu	36	9	117989881	117989881	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ASTN2	23245	hgsc.bcm.edu	36	9	118528049	118528049	+	Silent	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PTGS1	5742	hgsc.bcm.edu	36	9	124180553	124180553	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
SCAI	0	hgsc.bcm.edu	36	9	126773471	126773471	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DOLK	22845	hgsc.bcm.edu	36	9	130748733	130748733	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RB1	5925	hgsc.bcm.edu	36	13	47834985	47834985	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RB1	5925	hgsc.bcm.edu	36	13	47931917	47931917	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MYCBP2	23077	hgsc.bcm.edu	36	13	76542800	76542800	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ASB13	79754	hgsc.bcm.edu	36	10	5733285	5733285	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PRKCQ	5588	hgsc.bcm.edu	36	10	6592995	6592995	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
STAM	8027	hgsc.bcm.edu	36	10	17770086	17770086	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PLXDC2	84898	hgsc.bcm.edu	36	10	20472311	20472311	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MYO3A	53904	hgsc.bcm.edu	36	10	26503399	26503399	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ANKRD30A	91074	hgsc.bcm.edu	36	10	37526222	37526222	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ERCC6	2074	hgsc.bcm.edu	36	10	50360878	50360878	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
HERC4	26091	hgsc.bcm.edu	36	10	69369383	69369383	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MYPN	84665	hgsc.bcm.edu	36	10	69640190	69640190	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PTEN	5728	hgsc.bcm.edu	36	10	89682817	89682817	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PTEN	5728	hgsc.bcm.edu	36	10	89682964	89682964	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PPRC1	23082	hgsc.bcm.edu	36	10	103887617	103887617	+	Silent	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PLEKHG4B	153478	hgsc.bcm.edu	36	5	204692	204692	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CCDC127	133957	hgsc.bcm.edu	36	5	258864	258864	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ADAMTS16	170690	hgsc.bcm.edu	36	5	5356430	5356430	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GOLPH3	64083	hgsc.bcm.edu	36	5	32171513	32171513	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
OSMR	9180	hgsc.bcm.edu	36	5	38968356	38968356	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DAB2	1601	hgsc.bcm.edu	36	5	39429208	39429208	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
OXCT1	5019	hgsc.bcm.edu	36	5	41898502	41898502	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GPR98	84059	hgsc.bcm.edu	36	5	90115487	90115487	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MAN2A1	4124	hgsc.bcm.edu	36	5	109148486	109148486	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
APC	324	hgsc.bcm.edu	36	5	112182841	112182841	+	Silent	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
APC	324	hgsc.bcm.edu	36	5	112203538	112203538	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KDM3B	51780	hgsc.bcm.edu	36	5	137736317	137736317	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
DNAJC18	202052	hgsc.bcm.edu	36	5	138788596	138788596	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PCDHB5	26167	hgsc.bcm.edu	36	5	140496510	140496510	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PCDHB12	56124	hgsc.bcm.edu	36	5	140568847	140568847	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PCDHGA7	56108	hgsc.bcm.edu	36	5	140744304	140744304	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PCDH1	5097	hgsc.bcm.edu	36	5	141228620	141228620	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ODZ2	57451	hgsc.bcm.edu	36	5	167606763	167606763	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CCDC99	54908	hgsc.bcm.edu	36	5	168958138	168958138	+	Silent	SNP	T	T	C	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ERGIC1	57222	hgsc.bcm.edu	36	5	172256654	172256654	+	Silent	SNP	G	G	A	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RNF130	55819	hgsc.bcm.edu	36	5	179400243	179400243	+	Silent	SNP	A	A	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MYH2	4620	hgsc.bcm.edu	36	17	10371789	10371789	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TMPRSS11A	339967	hgsc.bcm.edu	36	4	68462899	68462899	+	Splice_Site	SNP	A	A	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FBXO42	54455	hgsc.bcm.edu	36	1	16452777	16452778	+	Frame_Shift_Ins	INS	-	-	CACTG	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
EPS8L3	79574	hgsc.bcm.edu	36	1	110102132	110102133	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PLD5	200150	hgsc.bcm.edu	36	1	240343933	240343933	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ACVR2A	92	hgsc.bcm.edu	36	2	148400156	148400156	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MUC4	4585	hgsc.bcm.edu	36	3	196992981	196993028	+	In_Frame_Del	DEL	CTGAGGAAGGGCTAGTGACAGGAAGAGGCATGGTGTCACCTGTGGATA	CTGAGGAAGGGCTAGTGACAGGAAGAGGCATGGTGTCACCTGTGGATA	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	CTGAGGAAGGGCTAGTGACAGGAAGAGGCATGGTGTCACCTGTGGATA	CTGAGGAAGGGCTAGTGACAGGAAGAGGCATGGTGTCACCTGTGGATA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MUC4	4585	hgsc.bcm.edu	36	3	196994126	196994173	+	In_Frame_Del	DEL	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MUC4	4585	hgsc.bcm.edu	36	3	196999762	196999809	+	In_Frame_Del	DEL	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT	GGTGACAGGAAGAGGGGTGGTGTGACCTGTGGATACTGAGGAAGGGCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KIAA1211	57482	hgsc.bcm.edu	36	4	56875349	56875349	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
KIAA1211	57482	hgsc.bcm.edu	36	4	56875351	56875352	+	Frame_Shift_Ins	INS	-	-	G	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
GOLM1	51280	hgsc.bcm.edu	36	9	87845480	87845481	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	TC	TC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FAM157B	100132403	hgsc.bcm.edu	36	9	140227346	140227347	+	In_Frame_Ins	INS	-	-	CGG	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
MUC2	4583	hgsc.bcm.edu	36	11	1082802	1082802	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
UBTFL1	642623	hgsc.bcm.edu	36	11	89459536	89459537	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PTPRQ	374462	hgsc.bcm.edu	36	12	79467564	79467564	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
CUX2	23316	hgsc.bcm.edu	36	12	110234346	110234347	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
ORAI1	84876	hgsc.bcm.edu	36	12	120549157	120549162	+	In_Frame_Del	DEL	CCGCCA	CCGCCA	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	CCGCCA	CCGCCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
USP12	219333	hgsc.bcm.edu	36	13	26588719	26588720	+	Frame_Shift_Ins	INS	-	-	GG	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
C17orf97	400566	hgsc.bcm.edu	36	17	263602	263631	+	Frame_Shift_Del	DEL	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	AACCCCGAGGCCCTCAAGGGCTTCCACCCT	AACCCCGAGGCCCTCAAGGGCTTCCACCCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RAB11FIP4	84440	hgsc.bcm.edu	36	17	26876285	26876287	+	In_Frame_Del	DEL	GGA	GGA	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	GGA	GGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
TMEM200C	0	hgsc.bcm.edu	36	18	5881373	5881399	+	In_Frame_Del	DEL	GGCGGCGGCGGCCGCGGCGGCGGCCGC	GGCGGCGGCGGCCGCGGCGGCGGCCGC	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	GGCGGCGGCGGCCGCGGCGGCGGCCGC	GGCGGCGGCGGCCGCGGCGGCGGCCGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
C20orf3	57136	hgsc.bcm.edu	36	20	24897719	24897720	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
PCIF1	63935	hgsc.bcm.edu	36	20	44008107	44008108	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
FAM123B	139285	hgsc.bcm.edu	36	X	63329560	63329561	+	Frame_Shift_Ins	INS	-	-	TGTG	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
RBMX	27316	hgsc.bcm.edu	36	X	135784237	135784238	+	Frame_Shift_Ins	INS	-	-	GG	novel	unknown	TCGA-DM-A28H-01A-11D-A16V-10	TCGA-DM-A28H-10A-01D-A16V-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	6e684eb3-7da4-4969-bc44-e1537bbae928	1668ab06-2c63-4a29-975c-62dec9475507
