Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
CCDC132	55610	hgsc.bcm.edu	36	7	92761835	92761835	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
GRM8	2918	hgsc.bcm.edu	36	7	125960745	125960745	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
SSPO	23145	hgsc.bcm.edu	36	7	149124726	149124726	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
PTPRT	11122	hgsc.bcm.edu	36	20	40146768	40146768	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
NTSR1	4923	hgsc.bcm.edu	36	20	60811446	60811446	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
OR4N5	390437	hgsc.bcm.edu	36	14	19682295	19682295	+	Silent	SNP	G	G	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
ARHGAP5	394	hgsc.bcm.edu	36	14	31631047	31631047	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
FLRT2	23768	hgsc.bcm.edu	36	14	85158949	85158949	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
SERPINA9	327657	hgsc.bcm.edu	36	14	93999228	93999228	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
ZNF493	284443	hgsc.bcm.edu	36	19	21399138	21399138	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
ZNF497	162968	hgsc.bcm.edu	36	19	63559361	63559361	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
RBPMS	11030	hgsc.bcm.edu	36	8	30451841	30451841	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
ZFHX4	79776	hgsc.bcm.edu	36	8	77930495	77930495	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
VPS13B	157680	hgsc.bcm.edu	36	8	100589236	100589236	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
FAM135B	51059	hgsc.bcm.edu	36	8	139233029	139233029	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
LRRC40	55631	hgsc.bcm.edu	36	1	70389463	70389463	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
TYW3	127253	hgsc.bcm.edu	36	1	74977010	74977010	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
RABGGTB	5876	hgsc.bcm.edu	36	1	76032478	76032478	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
NEXN	91624	hgsc.bcm.edu	36	1	78181007	78181007	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
NTNG1	84628	hgsc.bcm.edu	36	1	107492762	107492762	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
HRNR	388697	hgsc.bcm.edu	36	1	150452374	150452374	+	Silent	SNP	G	G	A	rs12729662	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
MAEL	84944	hgsc.bcm.edu	36	1	165257704	165257704	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
SRGAP2	23380	hgsc.bcm.edu	36	1	204693336	204693336	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
RYR2	6262	hgsc.bcm.edu	36	1	235726661	235726661	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
OR2M3	127062	hgsc.bcm.edu	36	1	246433389	246433389	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
OR51B6	390058	hgsc.bcm.edu	36	11	5330054	5330054	+	Silent	SNP	G	G	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
CPT1A	1374	hgsc.bcm.edu	36	11	68305861	68305861	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
INPPL1	3636	hgsc.bcm.edu	36	11	71619097	71619097	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
GRIA4	2893	hgsc.bcm.edu	36	11	105302711	105302711	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
NEDD9	4739	hgsc.bcm.edu	36	6	11296477	11296477	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
AKAP12	9590	hgsc.bcm.edu	36	6	151714951	151714951	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
TP53	7157	hgsc.bcm.edu	36	17	7518264	7518264	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
CENPV	201161	hgsc.bcm.edu	36	17	16193985	16193985	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
NLK	51701	hgsc.bcm.edu	36	17	23519610	23519610	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
RUNX1	861	hgsc.bcm.edu	36	21	35174746	35174746	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
DSCR3	10311	hgsc.bcm.edu	36	21	37532740	37532740	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
COL6A2	1292	hgsc.bcm.edu	36	21	46370241	46370241	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
DPEP2	64174	hgsc.bcm.edu	36	16	66583476	66583476	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
SMAD4	4089	hgsc.bcm.edu	36	18	46845916	46845916	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
MLH1	4292	hgsc.bcm.edu	36	3	37030980	37030980	+	Missense_Mutation	SNP	G	G	A	rs63750303	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
SETD2	29072	hgsc.bcm.edu	36	3	47138182	47138182	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
FBXW12	285231	hgsc.bcm.edu	36	3	48398504	48398504	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
COL7A1	1294	hgsc.bcm.edu	36	3	48604189	48604189	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
COL6A5	256076	hgsc.bcm.edu	36	3	131603377	131603377	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
GFM1	85476	hgsc.bcm.edu	36	3	159846198	159846198	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
WDR49	151790	hgsc.bcm.edu	36	3	168760621	168760621	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
PIK3CA	5290	hgsc.bcm.edu	36	3	180434658	180434658	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
KRAS	3845	hgsc.bcm.edu	36	12	25271513	25271513	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
KRAS	3845	hgsc.bcm.edu	36	12	25271543	25271543	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
RYR3	6263	hgsc.bcm.edu	36	15	31802272	31802272	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
BNC1	646	hgsc.bcm.edu	36	15	81722962	81722962	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
NHS	4810	hgsc.bcm.edu	36	X	17620397	17620397	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
MAGEB3	4114	hgsc.bcm.edu	36	X	30164079	30164079	+	Silent	SNP	C	C	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
CXorf22	170063	hgsc.bcm.edu	36	X	35898824	35898824	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
BCOR	54880	hgsc.bcm.edu	36	X	39818815	39818815	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
MED14	9282	hgsc.bcm.edu	36	X	40458018	40458018	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
KDM6A	7403	hgsc.bcm.edu	36	X	44822686	44822686	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
SMC1A	8243	hgsc.bcm.edu	36	X	53452888	53452888	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
ATRX	546	hgsc.bcm.edu	36	X	76826566	76826566	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
CYLC1	1538	hgsc.bcm.edu	36	X	83015559	83015559	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
KLHL4	56062	hgsc.bcm.edu	36	X	86806481	86806481	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
ZNF449	203523	hgsc.bcm.edu	36	X	134321555	134321555	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
MAGEA1	4100	hgsc.bcm.edu	36	X	152135765	152135765	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
WDR19	57728	hgsc.bcm.edu	36	4	38896020	38896020	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
NPFFR2	10886	hgsc.bcm.edu	36	4	73213312	73213312	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
MAPK10	5602	hgsc.bcm.edu	36	4	87241356	87241356	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
DKK2	27123	hgsc.bcm.edu	36	4	108065301	108065301	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
SPOCK3	50859	hgsc.bcm.edu	36	4	167892743	167892743	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
GMCL1	64395	hgsc.bcm.edu	36	2	69935490	69935490	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
SLC9A2	6549	hgsc.bcm.edu	36	2	102640480	102640480	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
TUBA3E	112714	hgsc.bcm.edu	36	2	130665909	130665909	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
SCN7A	6332	hgsc.bcm.edu	36	2	167030277	167030277	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
CDK15	0	hgsc.bcm.edu	36	2	202427874	202427874	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
MOGAT1	116255	hgsc.bcm.edu	36	2	223262390	223262390	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
C13orf40	0	hgsc.bcm.edu	36	13	102195807	102195807	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
PTEN	5728	hgsc.bcm.edu	36	10	89715052	89715052	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
C10orf79	80217	hgsc.bcm.edu	36	10	105942018	105942018	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
C5orf22	55322	hgsc.bcm.edu	36	5	31570191	31570191	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
CTNNA1	1495	hgsc.bcm.edu	36	5	138294083	138294083	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
PCDHA5	56143	hgsc.bcm.edu	36	5	140182793	140182793	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
DCBLD2	131566	hgsc.bcm.edu	36	3	100026901	100026901	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
MUC4	4585	hgsc.bcm.edu	36	3	196991050	196991097	+	In_Frame_Del	DEL	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	-	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC	ACCTGTGGATAATGAGGAAGCATTGGTGACAGGAAGAGGGGTGGTGTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
MUC4	4585	hgsc.bcm.edu	36	3	196991492	196991539	+	In_Frame_Del	DEL	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	-	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT	GCTGAGGAAGTGTCGGTGACAGGAAGAGGGGTGGCGTGACGTGTGGAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
OCLN	4950	hgsc.bcm.edu	36	5	68835865	68835865	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
FAM186A	121006	hgsc.bcm.edu	36	12	49032180	49032215	+	In_Frame_Del	DEL	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	-	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA	TGAGAGGGATCTCCAATTCCTGAGCCTGCGGAGGGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
OR6C76	390326	hgsc.bcm.edu	36	12	54107226	54107226	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-F4-6805-01A-11D-1835-10	TCGA-F4-6805-10A-01D-1835-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0cc2828b-46ed-4e10-a023-92fc1d77b305	646f46e2-c177-430d-bc2c-000581ed2cc6
