Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
CARD11	84433	hgsc.bcm.edu	36	7	2934793	2934793	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KDELR2	11014	hgsc.bcm.edu	36	7	6469328	6469328	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ABCB5	340273	hgsc.bcm.edu	36	7	20704569	20704569	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PKD1L1	168507	hgsc.bcm.edu	36	7	47910608	47910608	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
EGFR	1956	hgsc.bcm.edu	36	7	55209166	55209166	+	Nonsense_Mutation	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
EGFR	1956	hgsc.bcm.edu	36	7	55209207	55209207	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MAGI2	9863	hgsc.bcm.edu	36	7	78920353	78920353	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
HEPACAM2	253012	hgsc.bcm.edu	36	7	92686687	92686687	+	Silent	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TAF6	6878	hgsc.bcm.edu	36	7	99547785	99547785	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PTPRZ1	5803	hgsc.bcm.edu	36	7	121487115	121487115	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
EZH2	2146	hgsc.bcm.edu	36	7	148147637	148147637	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MLL3	58508	hgsc.bcm.edu	36	7	151593199	151593199	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
FAM83D	81610	hgsc.bcm.edu	36	20	37014246	37014246	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SULF2	55959	hgsc.bcm.edu	36	20	45798859	45798859	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
STX16	8675	hgsc.bcm.edu	36	20	56684662	56684662	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
GNAS	2778	hgsc.bcm.edu	36	20	56912231	56912231	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TH1L	51497	hgsc.bcm.edu	36	20	56999479	56999479	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NTSR1	4923	hgsc.bcm.edu	36	20	60811430	60811430	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TCFL5	10732	hgsc.bcm.edu	36	20	60963254	60963254	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SMARCB1	6598	hgsc.bcm.edu	36	22	22488960	22488960	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ADRBK2	157	hgsc.bcm.edu	36	22	24404867	24404867	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CHEK2	11200	hgsc.bcm.edu	36	22	27421782	27421782	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KREMEN1	83999	hgsc.bcm.edu	36	22	27867934	27867934	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RPGRIP1	57096	hgsc.bcm.edu	36	14	20855751	20855751	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
FSCB	84075	hgsc.bcm.edu	36	14	44043616	44043616	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SYNE2	23224	hgsc.bcm.edu	36	14	63527028	63527028	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
WDR25	79446	hgsc.bcm.edu	36	14	100004170	100004170	+	Silent	SNP	A	A	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
DYNC1H1	1778	hgsc.bcm.edu	36	14	101531342	101531342	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ONECUT3	390874	hgsc.bcm.edu	36	19	1726188	1726188	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
BTBD2	55643	hgsc.bcm.edu	36	19	1938553	1938553	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
LASS4	79603	hgsc.bcm.edu	36	19	8228866	8228866	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
COL5A3	50509	hgsc.bcm.edu	36	19	9941337	9941337	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SLC1A6	6511	hgsc.bcm.edu	36	19	14943551	14943551	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OR10H1	26539	hgsc.bcm.edu	36	19	15779101	15779101	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ZNF430	80264	hgsc.bcm.edu	36	19	21031473	21031473	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ARHGAP33	0	hgsc.bcm.edu	36	19	40965141	40965141	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TULP2	7288	hgsc.bcm.edu	36	19	54077227	54077227	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KLK6	5653	hgsc.bcm.edu	36	19	56162349	56162349	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TTYH1	57348	hgsc.bcm.edu	36	19	59625288	59625288	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PTPRH	5794	hgsc.bcm.edu	36	19	60408621	60408621	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PTPRH	5794	hgsc.bcm.edu	36	19	60408623	60408623	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PEG3	5178	hgsc.bcm.edu	36	19	62017193	62017193	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ZNF549	256051	hgsc.bcm.edu	36	19	62741182	62741182	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MYOM2	9172	hgsc.bcm.edu	36	8	2044699	2044699	+	Silent	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
DLC1	10395	hgsc.bcm.edu	36	8	13303482	13303482	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ANK1	286	hgsc.bcm.edu	36	8	41662846	41662846	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PRKDC	5591	hgsc.bcm.edu	36	8	48873437	48873437	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ASPH	444	hgsc.bcm.edu	36	8	62651905	62651905	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OSR2	116039	hgsc.bcm.edu	36	8	100033033	100033033	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CSMD3	114788	hgsc.bcm.edu	36	8	113325871	113325871	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CSMD3	114788	hgsc.bcm.edu	36	8	113392466	113392466	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KCNQ3	3786	hgsc.bcm.edu	36	8	133265706	133265706	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PLEC	0	hgsc.bcm.edu	36	8	145065261	145065261	+	Silent	SNP	G	G	A	rs34365303	byFrequency	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TARDBP	23435	hgsc.bcm.edu	36	1	11001432	11001432	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
C1orf187	374946	hgsc.bcm.edu	36	1	11694561	11694561	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ARID1A	8289	hgsc.bcm.edu	36	1	26930543	26930543	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TXLNA	200081	hgsc.bcm.edu	36	1	32418559	32418559	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
DMBX1	127343	hgsc.bcm.edu	36	1	46749364	46749364	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KTI12	112970	hgsc.bcm.edu	36	1	52271768	52271768	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TMEM48	55706	hgsc.bcm.edu	36	1	54035264	54035264	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KANK4	163782	hgsc.bcm.edu	36	1	62513153	62513153	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
LPAR3	23566	hgsc.bcm.edu	36	1	85104117	85104117	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
S1PR1	1901	hgsc.bcm.edu	36	1	101477258	101477258	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SYT6	148281	hgsc.bcm.edu	36	1	114481864	114481864	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CHD1L	9557	hgsc.bcm.edu	36	1	145193150	145193150	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
HIST2H2AB	317772	hgsc.bcm.edu	36	1	148125789	148125789	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
INTS3	65123	hgsc.bcm.edu	36	1	151996790	151996790	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
HMCN1	83872	hgsc.bcm.edu	36	1	184368094	184368094	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KIAA1804	84451	hgsc.bcm.edu	36	1	231548851	231548851	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RYR2	6262	hgsc.bcm.edu	36	1	236013823	236013823	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PLD5	200150	hgsc.bcm.edu	36	1	240450011	240450011	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
AKT3	10000	hgsc.bcm.edu	36	1	241735181	241735181	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OR2L8	391190	hgsc.bcm.edu	36	1	246179532	246179532	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OR2L13	284521	hgsc.bcm.edu	36	1	246329620	246329620	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OR2G6	391211	hgsc.bcm.edu	36	1	246752149	246752149	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
IFITM3	10410	hgsc.bcm.edu	36	11	309855	309855	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NAP1L4	4676	hgsc.bcm.edu	36	11	2937577	2937577	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NUP98	4928	hgsc.bcm.edu	36	11	3680536	3680536	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NUP98	4928	hgsc.bcm.edu	36	11	3731140	3731140	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OR56B4	196335	hgsc.bcm.edu	36	11	6086390	6086390	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OR6A2	8590	hgsc.bcm.edu	36	11	6773502	6773502	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OR2D2	120776	hgsc.bcm.edu	36	11	6869543	6869543	+	Silent	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PSMA1	5682	hgsc.bcm.edu	36	11	14492602	14492602	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ACCS	84680	hgsc.bcm.edu	36	11	44061361	44061361	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OR4S2	219431	hgsc.bcm.edu	36	11	55174973	55174973	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OR5L2	26338	hgsc.bcm.edu	36	11	55351473	55351473	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OR5T2	219464	hgsc.bcm.edu	36	11	55756167	55756167	+	Silent	SNP	A	A	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
OR1S2	219958	hgsc.bcm.edu	36	11	57727665	57727665	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CCDC88B	283234	hgsc.bcm.edu	36	11	63866124	63866124	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
C11orf68	83638	hgsc.bcm.edu	36	11	65441774	65441774	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SERPINH1	871	hgsc.bcm.edu	36	11	74957655	74957655	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
FAT3	120114	hgsc.bcm.edu	36	11	92239717	92239717	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
GRIA4	2893	hgsc.bcm.edu	36	11	105237966	105237966	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ELMOD1	55531	hgsc.bcm.edu	36	11	107007545	107007545	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ATM	472	hgsc.bcm.edu	36	11	107675687	107675687	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TECTA	7007	hgsc.bcm.edu	36	11	120505627	120505627	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ARHGAP32	0	hgsc.bcm.edu	36	11	128348124	128348124	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PRDM10	56980	hgsc.bcm.edu	36	11	129298399	129298399	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
HDGFL1	154150	hgsc.bcm.edu	36	6	22678104	22678104	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SLC39A7	7922	hgsc.bcm.edu	36	6	33277578	33277578	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
DAXX	1616	hgsc.bcm.edu	36	6	33395837	33395837	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TREML2	79865	hgsc.bcm.edu	36	6	41274076	41274076	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TREML2	79865	hgsc.bcm.edu	36	6	41274097	41274097	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KIAA0240	23506	hgsc.bcm.edu	36	6	42927907	42927907	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ZNF451	26036	hgsc.bcm.edu	36	6	57120397	57120397	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PHIP	55023	hgsc.bcm.edu	36	6	79711819	79711819	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MDN1	23195	hgsc.bcm.edu	36	6	90429283	90429283	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MDN1	23195	hgsc.bcm.edu	36	6	90429286	90429286	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MMS22L	0	hgsc.bcm.edu	36	6	97727666	97727666	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ROS1	6098	hgsc.bcm.edu	36	6	117737959	117737959	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NCOA7	135112	hgsc.bcm.edu	36	6	126285561	126285561	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MOXD1	26002	hgsc.bcm.edu	36	6	132764064	132764064	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TAAR9	134860	hgsc.bcm.edu	36	6	132901641	132901641	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MAP3K5	4217	hgsc.bcm.edu	36	6	136974132	136974132	+	Silent	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
GPR126	57211	hgsc.bcm.edu	36	6	142744797	142744797	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
UST	10090	hgsc.bcm.edu	36	6	149384305	149384305	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TAGAP	117289	hgsc.bcm.edu	36	6	159380309	159380309	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
IGF2R	3482	hgsc.bcm.edu	36	6	160437542	160437542	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
DLL1	28514	hgsc.bcm.edu	36	6	170439453	170439453	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TP53	7157	hgsc.bcm.edu	36	17	7518263	7518263	+	Missense_Mutation	SNP	C	C	T	rs11540652	byHapMap	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TP53	7157	hgsc.bcm.edu	36	17	7520048	7520048	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TP53	7157	hgsc.bcm.edu	36	17	7520086	7520086	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NCOR1	9611	hgsc.bcm.edu	36	17	15912045	15912045	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PIPOX	51268	hgsc.bcm.edu	36	17	24405704	24405704	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NF1	4763	hgsc.bcm.edu	36	17	26610183	26610183	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NF1	4763	hgsc.bcm.edu	36	17	26701420	26701420	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
IFI35	3430	hgsc.bcm.edu	36	17	38417793	38417793	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
BRCA1	672	hgsc.bcm.edu	36	17	38468895	38468895	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PPM1E	22843	hgsc.bcm.edu	36	17	54401830	54401830	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ABCA9	10350	hgsc.bcm.edu	36	17	64539998	64539998	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ABCA10	10349	hgsc.bcm.edu	36	17	64695443	64695443	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TMC6	11322	hgsc.bcm.edu	36	17	73632398	73632398	+	Silent	SNP	G	G	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RNF213	57674	hgsc.bcm.edu	36	17	75932280	75932280	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TPTE	7179	hgsc.bcm.edu	36	21	9973152	9973152	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KRTAP19-3	337970	hgsc.bcm.edu	36	21	30785961	30785961	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SON	6651	hgsc.bcm.edu	36	21	33845036	33845036	+	Silent	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RUNX1	861	hgsc.bcm.edu	36	21	35174787	35174787	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CASKIN1	57524	hgsc.bcm.edu	36	16	2176773	2176773	+	Silent	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CREBBP	1387	hgsc.bcm.edu	36	16	3741787	3741787	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
USP7	7874	hgsc.bcm.edu	36	16	8931754	8931754	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
DNAH3	55567	hgsc.bcm.edu	36	16	20960910	20960910	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CDH1	51343	hgsc.bcm.edu	36	16	67401677	67401677	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
HYDIN	54768	hgsc.bcm.edu	36	16	69421054	69421054	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
C16orf46	123775	hgsc.bcm.edu	36	16	79654934	79654934	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ZNF469	84627	hgsc.bcm.edu	36	16	87025905	87025905	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
L3MBTL4	91133	hgsc.bcm.edu	36	18	5950128	5950128	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SPIRE1	56907	hgsc.bcm.edu	36	18	12483109	12483109	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SMAD4	4089	hgsc.bcm.edu	36	18	46827535	46827535	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SMAD4	4089	hgsc.bcm.edu	36	18	46827567	46827567	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CNOT10	25904	hgsc.bcm.edu	36	3	32789961	32789961	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CNOT10	25904	hgsc.bcm.edu	36	3	32789962	32789962	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MLH1	4292	hgsc.bcm.edu	36	3	37058826	37058826	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SCN5A	6331	hgsc.bcm.edu	36	3	38567991	38567991	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SETD2	29072	hgsc.bcm.edu	36	3	47136984	47136984	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ATRIP	84126	hgsc.bcm.edu	36	3	48476724	48476724	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
LAMB2	84823	hgsc.bcm.edu	36	3	49144737	49144737	+	Silent	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ABI3BP	25890	hgsc.bcm.edu	36	3	102087768	102087768	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
GOLGB1	2804	hgsc.bcm.edu	36	3	122892521	122892521	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PARP14	54625	hgsc.bcm.edu	36	3	123905421	123905421	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
GATA2	2624	hgsc.bcm.edu	36	3	129685499	129685499	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TOPBP1	11073	hgsc.bcm.edu	36	3	134810076	134810076	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
EPHB1	2047	hgsc.bcm.edu	36	3	136334453	136334453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MRPS22	56945	hgsc.bcm.edu	36	3	140552584	140552584	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SLITRK3	22865	hgsc.bcm.edu	36	3	166389520	166389520	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MECOM	0	hgsc.bcm.edu	36	3	170302616	170302616	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PIK3CA	5290	hgsc.bcm.edu	36	3	180434604	180434604	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
C1RL	51279	hgsc.bcm.edu	36	12	7140318	7140318	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PIK3C2G	5288	hgsc.bcm.edu	36	12	18468200	18468200	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SLCO1B1	10599	hgsc.bcm.edu	36	12	21244771	21244771	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SLC2A13	114134	hgsc.bcm.edu	36	12	38510254	38510254	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
FAM186B	84070	hgsc.bcm.edu	36	12	48283332	48283332	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
LARP4	113251	hgsc.bcm.edu	36	12	49147019	49147019	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ITGB7	3695	hgsc.bcm.edu	36	12	51876671	51876671	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
STAT2	6773	hgsc.bcm.edu	36	12	55030922	55030922	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NACA	4666	hgsc.bcm.edu	36	12	55393239	55393239	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
UHRF1BP1L	23074	hgsc.bcm.edu	36	12	98977382	98977382	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CRY1	1407	hgsc.bcm.edu	36	12	105917969	105917969	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ANAPC7	51434	hgsc.bcm.edu	36	12	109309978	109309978	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ACAD10	80724	hgsc.bcm.edu	36	12	110631811	110631811	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
IQCD	115811	hgsc.bcm.edu	36	12	112129789	112129789	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RBM19	9904	hgsc.bcm.edu	36	12	112868063	112868063	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
AQR	9716	hgsc.bcm.edu	36	15	32954217	32954217	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
UNC13C	440279	hgsc.bcm.edu	36	15	52314568	52314568	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CGNL1	84952	hgsc.bcm.edu	36	15	55517809	55517809	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RORA	6095	hgsc.bcm.edu	36	15	58758165	58758165	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KIAA1024	23251	hgsc.bcm.edu	36	15	77536019	77536019	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MXRA5	25878	hgsc.bcm.edu	36	X	3258744	3258744	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RBBP7	5931	hgsc.bcm.edu	36	X	16780622	16780622	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
BCOR	54880	hgsc.bcm.edu	36	X	39801517	39801517	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MAOA	4128	hgsc.bcm.edu	36	X	43400577	43400577	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
GNL3L	54552	hgsc.bcm.edu	36	X	54601673	54601673	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ITIH5L	347365	hgsc.bcm.edu	36	X	54801851	54801851	+	Nonsense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MAGEH1	28986	hgsc.bcm.edu	36	X	55495569	55495569	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CYLC1	1538	hgsc.bcm.edu	36	X	83015637	83015637	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NXF3	56000	hgsc.bcm.edu	36	X	102224647	102224647	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
FAM70A	55026	hgsc.bcm.edu	36	X	119294911	119294911	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
XIAP	331	hgsc.bcm.edu	36	X	122847959	122847959	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
STAG2	10735	hgsc.bcm.edu	36	X	123022774	123022774	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ODZ1	10178	hgsc.bcm.edu	36	X	123485111	123485111	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
L1CAM	3897	hgsc.bcm.edu	36	X	152783769	152783769	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CLIC2	1193	hgsc.bcm.edu	36	X	154160527	154160527	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CCKAR	886	hgsc.bcm.edu	36	4	26092552	26092552	+	Missense_Mutation	SNP	C	C	T	rs52795588	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KIT	3815	hgsc.bcm.edu	36	4	55288397	55288397	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
FRAS1	80144	hgsc.bcm.edu	36	4	79579147	79579147	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ABCG2	9429	hgsc.bcm.edu	36	4	89261931	89261931	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PDHA2	5161	hgsc.bcm.edu	36	4	96980348	96980348	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RG9MTD2	93587	hgsc.bcm.edu	36	4	100689517	100689517	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TIFA	92610	hgsc.bcm.edu	36	4	113418895	113418895	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SPRY1	10252	hgsc.bcm.edu	36	4	124542859	124542859	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
WDR17	116966	hgsc.bcm.edu	36	4	177283414	177283414	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TPO	7173	hgsc.bcm.edu	36	2	1479487	1479487	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ITSN2	50618	hgsc.bcm.edu	36	2	24292479	24292479	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SRD5A2	6716	hgsc.bcm.edu	36	2	31607975	31607975	+	Silent	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NLRC4	58484	hgsc.bcm.edu	36	2	32329377	32329377	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
BMP10	27302	hgsc.bcm.edu	36	2	68946355	68946355	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SFTPB	6439	hgsc.bcm.edu	36	2	85746289	85746289	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
POLR1A	25885	hgsc.bcm.edu	36	2	86129874	86129874	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RFX8	0	hgsc.bcm.edu	36	2	101395851	101395851	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NCK2	8440	hgsc.bcm.edu	36	2	105837967	105837967	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KCNH7	90134	hgsc.bcm.edu	36	2	163010920	163010920	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TTN	7273	hgsc.bcm.edu	36	2	179155271	179155271	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ORC2	83884	hgsc.bcm.edu	36	2	201506912	201506912	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ZFAND2B	130617	hgsc.bcm.edu	36	2	219780927	219780927	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
FARSB	10056	hgsc.bcm.edu	36	2	223173002	223173002	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NGEF	25791	hgsc.bcm.edu	36	2	233493290	233493290	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SEPT2	23157	hgsc.bcm.edu	36	2	241925842	241925842	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CDC37L1	55664	hgsc.bcm.edu	36	9	4687857	4687857	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
INSL6	11172	hgsc.bcm.edu	36	9	5175550	5175550	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
C9orf46	55848	hgsc.bcm.edu	36	9	5351833	5351833	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PTCH1	5727	hgsc.bcm.edu	36	9	97271065	97271065	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ZNF189	7743	hgsc.bcm.edu	36	9	103211424	103211424	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ABCA1	19	hgsc.bcm.edu	36	9	106660715	106660715	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TNC	7134	hgsc.bcm.edu	36	9	116865069	116865069	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
DBC1	57805	hgsc.bcm.edu	36	9	120969784	120969784	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
DENND1A	57706	hgsc.bcm.edu	36	9	125185836	125185836	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
LAMC3	10319	hgsc.bcm.edu	36	9	132906864	132906864	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TPTE2	93492	hgsc.bcm.edu	36	13	18910235	18910235	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
BRCA2	675	hgsc.bcm.edu	36	13	31809543	31809543	+	Silent	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
BRCA2	675	hgsc.bcm.edu	36	13	31811271	31811271	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
COG3	83548	hgsc.bcm.edu	36	13	44988327	44988327	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RB1	5925	hgsc.bcm.edu	36	13	47928360	47928360	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RB1	5925	hgsc.bcm.edu	36	13	47935879	47935879	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NALCN	259232	hgsc.bcm.edu	36	13	100512442	100512442	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RASA3	22821	hgsc.bcm.edu	36	13	113794816	113794816	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
C10orf18	54906	hgsc.bcm.edu	36	10	5812844	5812844	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
BEND7	222389	hgsc.bcm.edu	36	10	13581899	13581899	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TRDMT1	1787	hgsc.bcm.edu	36	10	17241231	17241231	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KIF5B	3799	hgsc.bcm.edu	36	10	32369383	32369383	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RET	5979	hgsc.bcm.edu	36	10	42942079	42942079	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
HNRNPH3	3189	hgsc.bcm.edu	36	10	69771799	69771799	+	Silent	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
STOX1	219736	hgsc.bcm.edu	36	10	70315453	70315453	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ZMIZ1	57178	hgsc.bcm.edu	36	10	80728328	80728328	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
BMPR1A	657	hgsc.bcm.edu	36	10	88673227	88673227	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PTEN	5728	hgsc.bcm.edu	36	10	89614225	89614225	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PTEN	5728	hgsc.bcm.edu	36	10	89682896	89682896	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PTEN	5728	hgsc.bcm.edu	36	10	89682945	89682945	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PTEN	5728	hgsc.bcm.edu	36	10	89701892	89701892	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PTEN	5728	hgsc.bcm.edu	36	10	89707719	89707719	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PTEN	5728	hgsc.bcm.edu	36	10	89710833	89710833	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PDCD11	22984	hgsc.bcm.edu	36	10	105194321	105194321	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SORCS1	114815	hgsc.bcm.edu	36	10	108449103	108449103	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
FGFR2	2263	hgsc.bcm.edu	36	10	123237573	123237573	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
FGFR2	2263	hgsc.bcm.edu	36	10	123269554	123269554	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TRIO	7204	hgsc.bcm.edu	36	5	14411331	14411331	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CDH10	1008	hgsc.bcm.edu	36	5	24523750	24523750	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
IL7R	3575	hgsc.bcm.edu	36	5	35909369	35909369	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TTC33	23548	hgsc.bcm.edu	36	5	40782793	40782793	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
IL6ST	3572	hgsc.bcm.edu	36	5	55295758	55295758	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
TRIM23	373	hgsc.bcm.edu	36	5	64943281	64943281	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MAP1B	4131	hgsc.bcm.edu	36	5	71526913	71526913	+	Nonsense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
GPR98	84059	hgsc.bcm.edu	36	5	90024330	90024330	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
APC	324	hgsc.bcm.edu	36	5	112203031	112203031	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
APC	324	hgsc.bcm.edu	36	5	112203061	112203061	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SLC12A2	6558	hgsc.bcm.edu	36	5	127514865	127514865	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
IL3	3562	hgsc.bcm.edu	36	5	131426277	131426277	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PCDHA12	56137	hgsc.bcm.edu	36	5	140236849	140236849	+	Silent	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PCDHB3	56132	hgsc.bcm.edu	36	5	140461497	140461497	+	Silent	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PCDHB15	56121	hgsc.bcm.edu	36	5	140607602	140607602	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PCDHGA2	56113	hgsc.bcm.edu	36	5	140701171	140701171	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PCDHGB5	56101	hgsc.bcm.edu	36	5	140759342	140759342	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
PCDHGA9	56107	hgsc.bcm.edu	36	5	140764663	140764663	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ITK	3702	hgsc.bcm.edu	36	5	156603968	156603968	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
GABRA6	2559	hgsc.bcm.edu	36	5	161061198	161061198	+	Silent	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
GABRP	2568	hgsc.bcm.edu	36	5	170171763	170171763	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
COL7A1	1294	hgsc.bcm.edu	36	3	48582199	48582199	+	Splice_Site	SNP	T	T	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
FBXW7	55294	hgsc.bcm.edu	36	4	153473322	153473322	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RBM17	84991	hgsc.bcm.edu	36	10	6195552	6195552	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CCDC30	0	hgsc.bcm.edu	36	1	42774787	42774788	+	Frame_Shift_Del	DEL	AG	AG	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	AG	AG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KIAA1804	84451	hgsc.bcm.edu	36	1	231548848	231548849	+	Frame_Shift_Ins	INS	-	-	A	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MUC4	4585	hgsc.bcm.edu	36	3	196991329	196991376	+	In_Frame_Del	DEL	GGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGG	GGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGG	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	GGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGG	GGTGGCGTGACCTGTGGATACTGAGGAAGTGTCGGTGACAGGAAGAGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MUC4	4585	hgsc.bcm.edu	36	3	196991994	196992041	+	In_Frame_Del	DEL	GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT	GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT	GAAGAGGGGTGACGTGACCTGTGGATGCTGAGGAAGGGCTGGTGACAT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MUC4	4585	hgsc.bcm.edu	36	3	196993258	196993353	+	In_Frame_Del	DEL	ACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATACTGAGGAAGTCTCGGTGACAAGAAGAGGGGTGGTGTC	ACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATACTGAGGAAGTCTCGGTGACAAGAAGAGGGGTGGTGTC	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	ACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATACTGAGGAAGTCTCGGTGACAAGAAGAGGGGTGGTGTC	ACCTGTGGATGCTGAGGAAGCGTCGGTGACAAGAAGAGGAGTGGCGTGACCTGTGGATACTGAGGAAGTCTCGGTGACAAGAAGAGGGGTGGTGTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
MUC4	4585	hgsc.bcm.edu	36	3	196994839	196994886	+	In_Frame_Del	DEL	GTGACCTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGC	GTGACCTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGC	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	GTGACCTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGC	GTGACCTGTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
APC	324	hgsc.bcm.edu	36	5	112202819	112202820	+	Frame_Shift_Del	DEL	AT	AT	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	AT	AT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
RGL2	5863	hgsc.bcm.edu	36	6	33371943	33371943	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
CA9	768	hgsc.bcm.edu	36	9	35664191	35664208	+	In_Frame_Del	DEL	GGAGAGGAGGATCTACCT	GGAGAGGAGGATCTACCT	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	GGAGAGGAGGATCTACCT	GGAGAGGAGGATCTACCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KRTAP5-2	440021	hgsc.bcm.edu	36	11	1575749	1575778	+	In_Frame_Del	DEL	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	CCCCCACAGGAGCCACAGCCCCCCTTGGAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
FADS2	9415	hgsc.bcm.edu	36	11	61389255	61389256	+	Frame_Shift_Del	DEL	TC	TC	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	TC	TC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
SELPLG	6404	hgsc.bcm.edu	36	12	107541780	107541809	+	Frame_Shift_Del	DEL	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT	GAGTGGTCTGTGCCTCCGTGGGCACTGGTT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
ORAI1	84876	hgsc.bcm.edu	36	12	120549157	120549162	+	In_Frame_Del	DEL	CCGCCA	CCGCCA	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	CCGCCA	CCGCCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
EIF2B1	1967	hgsc.bcm.edu	36	12	122680920	122680922	+	In_Frame_Del	DEL	TGA	TGA	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	TGA	TGA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
KRTAP4-1	85285	hgsc.bcm.edu	36	17	36594322	36594378	+	Frame_Shift_Del	DEL	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	-	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG	CGGCAGCAGCTGGACATACCACAGCTGGGGTGGCAGGTGGTCTGACAGCAGAGTGGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
NEFH	4744	hgsc.bcm.edu	36	22	28215589	28215590	+	In_Frame_Ins	INS	-	-	CCCCTGAGAAGGCCAAGT	novel	unknown	TCGA-G4-6317-01A-11D-1719-10	TCGA-G4-6317-10A-01D-1720-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	3b0ea3f6-b4e7-40a1-a58b-3394038116be	21616365-e769-4e8b-b936-a2be14f6239a
