Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
SCRN1	9805	hgsc.bcm.edu	36	7	29946841	29946841	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
GUSB	2990	hgsc.bcm.edu	36	7	65082235	65082235	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
PON3	5446	hgsc.bcm.edu	36	7	94831192	94831192	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MET	8731	hgsc.bcm.edu	36	7	116210709	116210709	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
DPP6	1804	hgsc.bcm.edu	36	7	154315071	154315071	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
NCOA6	23054	hgsc.bcm.edu	36	20	32792314	32792314	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
RBM12	10137	hgsc.bcm.edu	36	20	33705464	33705464	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
COL9A3	1299	hgsc.bcm.edu	36	20	60931472	60931472	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
TTC38	55020	hgsc.bcm.edu	36	22	45056176	45056176	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
SMARCA4	6597	hgsc.bcm.edu	36	19	10957909	10957909	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ZNF208	7757	hgsc.bcm.edu	36	19	21947007	21947007	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ZNF257	113835	hgsc.bcm.edu	36	19	22063579	22063579	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ZNF461	92283	hgsc.bcm.edu	36	19	41821629	41821629	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
SUPT5H	6829	hgsc.bcm.edu	36	19	44657105	44657105	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ZNF347	84671	hgsc.bcm.edu	36	19	58335879	58335879	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
NLRP12	91662	hgsc.bcm.edu	36	19	58993458	58993458	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
LENG8	114823	hgsc.bcm.edu	36	19	59659398	59659398	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
BRSK1	84446	hgsc.bcm.edu	36	19	60506879	60506879	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ZNF628	89887	hgsc.bcm.edu	36	19	60686574	60686574	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
NLRP13	126204	hgsc.bcm.edu	36	19	61099175	61099175	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
DLC1	10395	hgsc.bcm.edu	36	8	13002248	13002248	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
DLC1	10395	hgsc.bcm.edu	36	8	13303482	13303482	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CYP7B1	9420	hgsc.bcm.edu	36	8	65690223	65690223	+	Missense_Mutation	SNP	C	C	T	rs59035258	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
TRIM55	84675	hgsc.bcm.edu	36	8	67224579	67224579	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
PEX2	5828	hgsc.bcm.edu	36	8	78058563	78058563	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
PKHD1L1	93035	hgsc.bcm.edu	36	8	110526919	110526919	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CASP9	842	hgsc.bcm.edu	36	1	15717210	15717210	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
PADI1	29943	hgsc.bcm.edu	36	1	17429208	17429208	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
USP48	84196	hgsc.bcm.edu	36	1	21894209	21894209	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ARID1A	8289	hgsc.bcm.edu	36	1	26930567	26930567	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MACF1	23499	hgsc.bcm.edu	36	1	39677660	39677660	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
C1orf183	55924	hgsc.bcm.edu	36	1	112071444	112071444	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
NOTCH2	4853	hgsc.bcm.edu	36	1	120307834	120307834	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
INSRR	3645	hgsc.bcm.edu	36	1	155082116	155082116	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ASPM	259266	hgsc.bcm.edu	36	1	195337280	195337280	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
DNAH14	127602	hgsc.bcm.edu	36	1	223408088	223408088	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ABCB10	23456	hgsc.bcm.edu	36	1	227734051	227734051	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
GALNT2	2590	hgsc.bcm.edu	36	1	228405524	228405524	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
GNG4	2786	hgsc.bcm.edu	36	1	233782062	233782062	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
OR2AG2	338755	hgsc.bcm.edu	36	11	6745956	6745956	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MRGPRX1	259249	hgsc.bcm.edu	36	11	18912015	18912015	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
OR5W2	390148	hgsc.bcm.edu	36	11	55438148	55438148	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
OR10G8	219869	hgsc.bcm.edu	36	11	123406420	123406420	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ADAMTS8	11095	hgsc.bcm.edu	36	11	129780789	129780789	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
FAM65B	9750	hgsc.bcm.edu	36	6	24940504	24940504	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MDC1	9656	hgsc.bcm.edu	36	6	30779026	30779026	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
TCP11	6954	hgsc.bcm.edu	36	6	35196034	35196034	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
TULP1	7287	hgsc.bcm.edu	36	6	35585496	35585496	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MCM3	4172	hgsc.bcm.edu	36	6	52246521	52246521	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
PDE10A	10846	hgsc.bcm.edu	36	6	165676917	165676917	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
C6orf70	55780	hgsc.bcm.edu	36	6	169910190	169910190	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ABCA5	23461	hgsc.bcm.edu	36	17	64781712	64781712	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
DNAH17	8632	hgsc.bcm.edu	36	17	73931827	73931827	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
DUS1L	64118	hgsc.bcm.edu	36	17	77612786	77612786	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
GABPA	2551	hgsc.bcm.edu	36	21	26046414	26046414	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
PRSS27	83886	hgsc.bcm.edu	36	16	2703553	2703553	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
SETD1A	9739	hgsc.bcm.edu	36	16	30898991	30898991	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
GPT2	84706	hgsc.bcm.edu	36	16	45515909	45515909	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CDH5	1003	hgsc.bcm.edu	36	16	64992280	64992280	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
TWSG1	57045	hgsc.bcm.edu	36	18	9386379	9386379	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ANKRD28	23243	hgsc.bcm.edu	36	3	15702743	15702743	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
DLEC1	9940	hgsc.bcm.edu	36	3	38079254	38079254	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
DNAH12	201625	hgsc.bcm.edu	36	3	57429579	57429579	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
GPR128	84873	hgsc.bcm.edu	36	3	101844826	101844826	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ALCAM	214	hgsc.bcm.edu	36	3	106751665	106751665	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MYH15	22989	hgsc.bcm.edu	36	3	109606965	109606965	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
FAM162A	26355	hgsc.bcm.edu	36	3	123605879	123605879	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CHST2	9435	hgsc.bcm.edu	36	3	144322889	144322889	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
SI	6490	hgsc.bcm.edu	36	3	166267839	166267839	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
PIK3CA	5290	hgsc.bcm.edu	36	3	180434834	180434834	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
KRAS	3845	hgsc.bcm.edu	36	12	25289551	25289551	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
FAM186A	121006	hgsc.bcm.edu	36	12	49032088	49032088	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
XPOT	11260	hgsc.bcm.edu	36	12	63098967	63098967	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
KSR2	283455	hgsc.bcm.edu	36	12	116777704	116777704	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ATP10A	57194	hgsc.bcm.edu	36	15	23476377	23476377	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ATP10A	57194	hgsc.bcm.edu	36	15	23498192	23498192	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
RYR3	6263	hgsc.bcm.edu	36	15	31723854	31723854	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
SPG21	51324	hgsc.bcm.edu	36	15	63049567	63049567	+	Missense_Mutation	SNP	T	T	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CLCN4	1183	hgsc.bcm.edu	36	X	10142007	10142007	+	Silent	SNP	C	C	T	rs36049237	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
SAT1	81539	hgsc.bcm.edu	36	X	23713740	23713740	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
RPGR	6103	hgsc.bcm.edu	36	X	38032188	38032188	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ZNF41	7592	hgsc.bcm.edu	36	X	47193165	47193165	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
HEPH	9843	hgsc.bcm.edu	36	X	65335470	65335470	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
NOX1	27035	hgsc.bcm.edu	36	X	100004413	100004413	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
THOC2	57187	hgsc.bcm.edu	36	X	122600518	122600518	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
RBMX	27316	hgsc.bcm.edu	36	X	135784062	135784062	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
KIT	3815	hgsc.bcm.edu	36	4	55286968	55286968	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MAB21L2	10586	hgsc.bcm.edu	36	4	151724435	151724435	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
SPOCK3	50859	hgsc.bcm.edu	36	4	167892743	167892743	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
AADAT	51166	hgsc.bcm.edu	36	4	171225081	171225081	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
PQLC3	130814	hgsc.bcm.edu	36	2	11218103	11218103	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ITSN2	50618	hgsc.bcm.edu	36	2	24292479	24292479	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MCFD2	90411	hgsc.bcm.edu	36	2	46989787	46989787	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
FAM123C	205147	hgsc.bcm.edu	36	2	131237037	131237037	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
SCN3A	6328	hgsc.bcm.edu	36	2	165660403	165660403	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
TTN	7273	hgsc.bcm.edu	36	2	179349788	179349788	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
DNAH7	56171	hgsc.bcm.edu	36	2	196445388	196445388	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ABCA12	26154	hgsc.bcm.edu	36	2	215574577	215574577	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
COL6A3	1293	hgsc.bcm.edu	36	2	237924559	237924559	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
KIF1A	547	hgsc.bcm.edu	36	2	241306150	241306150	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
TAF1L	138474	hgsc.bcm.edu	36	9	32621117	32621117	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MCART1	92014	hgsc.bcm.edu	36	9	37877989	37877989	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
APBA1	320	hgsc.bcm.edu	36	9	71261069	71261069	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
C9orf41	138199	hgsc.bcm.edu	36	9	76821078	76821078	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
PTPN3	5774	hgsc.bcm.edu	36	9	111208623	111208623	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ASTN2	23245	hgsc.bcm.edu	36	9	119016563	119016563	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
RB1	5925	hgsc.bcm.edu	36	13	47935914	47935914	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
AKR1C4	1109	hgsc.bcm.edu	36	10	5237796	5237796	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
NSUN6	221078	hgsc.bcm.edu	36	10	18977515	18977515	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CDH23	64072	hgsc.bcm.edu	36	10	72996634	72996634	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
PTEN	5728	hgsc.bcm.edu	36	10	89707596	89707596	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
IRX1	79192	hgsc.bcm.edu	36	5	3652404	3652404	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
C5orf42	65250	hgsc.bcm.edu	36	5	37156188	37156188	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
SPZ1	84654	hgsc.bcm.edu	36	5	79652842	79652842	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ANKRD32	84250	hgsc.bcm.edu	36	5	94048167	94048167	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
APC	324	hgsc.bcm.edu	36	5	112182768	112182768	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
APC	324	hgsc.bcm.edu	36	5	112201816	112201816	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
PCDHGA3	56112	hgsc.bcm.edu	36	5	140704594	140704594	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CAMK2A	815	hgsc.bcm.edu	36	5	149582903	149582903	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CCDC69	26112	hgsc.bcm.edu	36	5	150565218	150565218	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
KCNQ2	3785	hgsc.bcm.edu	36	20	61546454	61546454	+	Splice_Site	SNP	A	A	G	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CREBBP	1387	hgsc.bcm.edu	36	16	3729727	3729727	+	Splice_Site	SNP	C	C	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MIB2	142678	hgsc.bcm.edu	36	1	1548618	1548659	+	In_Frame_Del	DEL	CCCTCTGCCCACAGGTCCCGAGCAGCCCGGCCCACCATGGAC	CCCTCTGCCCACAGGTCCCGAGCAGCCCGGCCCACCATGGAC	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	CCCTCTGCCCACAGGTCCCGAGCAGCCCGGCCCACCATGGAC	CCCTCTGCCCACAGGTCCCGAGCAGCCCGGCCCACCATGGAC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
TMEM37	140738	hgsc.bcm.edu	36	2	119911121	119911122	+	In_Frame_Ins	INS	-	-	GTGTGC	rs3217464	byCluster	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
DLX2	9856	hgsc.bcm.edu	36	2	172675374	172675375	+	In_Frame_Ins	INS	-	-	GCT	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ZNF717	100131827	hgsc.bcm.edu	36	3	75869005	75869013	+	In_Frame_Del	DEL	CTACATTCT	CTACATTCT	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	CTACATTCT	CTACATTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MUC4	4585	hgsc.bcm.edu	36	3	196996629	196996676	+	In_Frame_Del	DEL	CTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATA	CTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATA	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	CTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATA	CTGAGGAAGGGCTAGTGACAGGAAGAGGCGTGGTGTCACCTGTGGATA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
MUC4	4585	hgsc.bcm.edu	36	3	196996951	196996998	+	In_Frame_Del	DEL	GTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGT	GTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGT	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	GTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGT	GTGACCTGTGGGTACTGAGGAAGCGTCGGTGACAGGAAGAGGGGTGGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CRIPAK	285464	hgsc.bcm.edu	36	4	1379220	1379248	+	Frame_Shift_Del	DEL	TGGAGTGCCCGCCTGCTCACGTGCCCATA	TGGAGTGCCCGCCTGCTCACGTGCCCATA	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	TGGAGTGCCCGCCTGCTCACGTGCCCATA	TGGAGTGCCCGCCTGCTCACGTGCCCATA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
KIAA1211	57482	hgsc.bcm.edu	36	4	56875333	56875334	+	In_Frame_Ins	INS	-	-	GGAGCGGAGGGAGCGGAG	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CNOT6L	246175	hgsc.bcm.edu	36	4	78860748	78860749	+	Frame_Shift_Del	DEL	TG	TG	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	TG	TG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
FBXW7	55294	hgsc.bcm.edu	36	4	153466777	153466777	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
HLA-DQA1	3117	hgsc.bcm.edu	36	6	32717217	32717219	+	In_Frame_Del	DEL	GGT	GGT	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	GGT	GGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ABO	28	hgsc.bcm.edu	36	9	135120878	135120878	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
GPRIN2	9721	hgsc.bcm.edu	36	10	46419597	46419598	+	In_Frame_Ins	INS	-	-	ATGAGGGAG	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
KRTAP5-2	440021	hgsc.bcm.edu	36	11	1575749	1575778	+	In_Frame_Del	DEL	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	CCCCCACAGGAGCCACAGCCCCCCTTGGAG	CCCCCACAGGAGCCACAGCCCCCCTTGGAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
DDHD1	80821	hgsc.bcm.edu	36	14	52689230	52689231	+	In_Frame_Ins	INS	-	-	GCCGCC	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
ATP2A1	487	hgsc.bcm.edu	36	16	28817214	28817215	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
CRISPLD2	83716	hgsc.bcm.edu	36	16	83440603	83440604	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
TP53	7157	hgsc.bcm.edu	36	17	7518307	7518308	+	Frame_Shift_Ins	INS	-	-	TGGA	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
TGIF1	7050	hgsc.bcm.edu	36	18	3442223	3442223	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
RBM38	55544	hgsc.bcm.edu	36	20	55400099	55400100	+	Frame_Shift_Ins	INS	-	-	C	rs11481309	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
KRTAP10-7	386675	hgsc.bcm.edu	36	21	44845084	44845098	+	Frame_Shift_Del	DEL	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG	-	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
NEFH	4744	hgsc.bcm.edu	36	22	28215589	28215590	+	In_Frame_Ins	INS	-	-	CCCCTGAGAAGGCCAAGT	novel	unknown	TCGA-CI-6620-01A-11D-1826-10	TCGA-CI-6620-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	66011422-7627-4ec0-8c3a-bb1c46ac07a3	26e3b09a-9026-4d15-b54a-cc15db6d632f
