Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
GET4	0	hgsc.bcm.edu	36	7	892751	892751	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
BLVRA	644	hgsc.bcm.edu	36	7	43798905	43798905	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
BAZ1B	9031	hgsc.bcm.edu	36	7	72529370	72529370	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PTPN12	5782	hgsc.bcm.edu	36	7	77085757	77085757	+	Missense_Mutation	SNP	G	G	A	rs9640663	by2Hit2Allele;byCluster;byFrequency;byHapMap	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ABCB1	5243	hgsc.bcm.edu	36	7	86998572	86998572	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
FAM200A	0	hgsc.bcm.edu	36	7	98983313	98983313	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MUC17	140453	hgsc.bcm.edu	36	7	100468023	100468023	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SLC26A4	5172	hgsc.bcm.edu	36	7	107102659	107102659	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PPP1R3A	5506	hgsc.bcm.edu	36	7	113305540	113305540	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CTTNBP2	83992	hgsc.bcm.edu	36	7	117218664	117218664	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
C7orf58	79974	hgsc.bcm.edu	36	7	120416945	120416945	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
HIPK2	28996	hgsc.bcm.edu	36	7	138949587	138949587	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZNF786	136051	hgsc.bcm.edu	36	7	148398734	148398734	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZNF777	27153	hgsc.bcm.edu	36	7	148760803	148760803	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DEFB126	81623	hgsc.bcm.edu	36	20	74160	74160	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
FKBP1A	2280	hgsc.bcm.edu	36	20	1304217	1304217	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ACSS1	84532	hgsc.bcm.edu	36	20	24941471	24941471	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
NINL	22981	hgsc.bcm.edu	36	20	25405076	25405076	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ASXL1	171023	hgsc.bcm.edu	36	20	30488142	30488142	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DNMT3B	1789	hgsc.bcm.edu	36	20	30851694	30851694	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DHX35	60625	hgsc.bcm.edu	36	20	37031182	37031182	+	Missense_Mutation	SNP	C	C	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PLCG1	5335	hgsc.bcm.edu	36	20	39227379	39227379	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ARFGEF2	10564	hgsc.bcm.edu	36	20	47019167	47019167	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ATP9A	10079	hgsc.bcm.edu	36	20	49743960	49743960	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
OGFR	11054	hgsc.bcm.edu	36	20	60915138	60915138	+	Missense_Mutation	SNP	G	G	A	rs35813009	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
OGFR	11054	hgsc.bcm.edu	36	20	60915142	60915142	+	Missense_Mutation	SNP	G	G	C	rs6122315	by2Hit2Allele;byCluster	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TPD52L2	7165	hgsc.bcm.edu	36	20	61971176	61971176	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
OPRL1	4987	hgsc.bcm.edu	36	20	62200247	62200247	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
USP18	11274	hgsc.bcm.edu	36	22	17036570	17036570	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
AP1B1	162	hgsc.bcm.edu	36	22	28080810	28080810	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TEP1	7011	hgsc.bcm.edu	36	14	19929045	19929045	+	Silent	SNP	C	C	T	rs872074	byCluster;byFrequency;byHapMap	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
LRRC16B	90668	hgsc.bcm.edu	36	14	23595388	23595388	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CHMP4A	128866	hgsc.bcm.edu	36	14	23752458	23752458	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SPTB	6710	hgsc.bcm.edu	36	14	64311611	64311611	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PCNX	22990	hgsc.bcm.edu	36	14	70612833	70612833	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SEL1L	6400	hgsc.bcm.edu	36	14	81034086	81034086	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SERPINA10	51156	hgsc.bcm.edu	36	14	93826270	93826270	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PLIN4	0	hgsc.bcm.edu	36	19	4463369	4463369	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
NACC1	112939	hgsc.bcm.edu	36	19	13107330	13107330	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
C19orf57	79173	hgsc.bcm.edu	36	19	13864622	13864622	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
NWD1	284434	hgsc.bcm.edu	36	19	16779475	16779475	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZNF676	163223	hgsc.bcm.edu	36	19	22155288	22155288	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DMKN	93099	hgsc.bcm.edu	36	19	40688696	40688696	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ARHGAP33	0	hgsc.bcm.edu	36	19	40970866	40970866	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZNF227	7770	hgsc.bcm.edu	36	19	49424485	49424485	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZNF229	7772	hgsc.bcm.edu	36	19	49625049	49625049	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
LIG1	26018	hgsc.bcm.edu	36	19	53348953	53348953	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SIGLEC12	89858	hgsc.bcm.edu	36	19	56696607	56696607	+	Missense_Mutation	SNP	G	G	C	rs61742108	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
U2AF2	11338	hgsc.bcm.edu	36	19	60877232	60877232	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
NLRP9	338321	hgsc.bcm.edu	36	19	60936600	60936600	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZIM3	114026	hgsc.bcm.edu	36	19	62339004	62339004	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZSCAN1	284312	hgsc.bcm.edu	36	19	63241179	63241179	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
LZTS1	11178	hgsc.bcm.edu	36	8	20154964	20154964	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
RP1	10982	hgsc.bcm.edu	36	8	55696630	55696630	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
UBR5	51366	hgsc.bcm.edu	36	8	103335838	103335838	+	Silent	SNP	T	T	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CSMD3	114788	hgsc.bcm.edu	36	8	114360025	114360025	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
KIF1B	23095	hgsc.bcm.edu	36	1	10353858	10353858	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CYP4A11	1579	hgsc.bcm.edu	36	1	47179678	47179678	+	Silent	SNP	C	C	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
USP24	23358	hgsc.bcm.edu	36	1	55385961	55385961	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SGIP1	84251	hgsc.bcm.edu	36	1	66881988	66881988	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PIGK	10026	hgsc.bcm.edu	36	1	77407583	77407583	+	Nonsense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
KCNA10	3744	hgsc.bcm.edu	36	1	110862334	110862334	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
NBPF10	100132406	hgsc.bcm.edu	36	1	144035013	144035013	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CEP350	9857	hgsc.bcm.edu	36	1	178278864	178278864	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
OBSCN	84033	hgsc.bcm.edu	36	1	226533655	226533655	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
UBQLN3	50613	hgsc.bcm.edu	36	11	5486894	5486894	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
LDHA	3939	hgsc.bcm.edu	36	11	18377606	18377606	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MRGPRX1	259249	hgsc.bcm.edu	36	11	18912700	18912700	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SLC17A6	57084	hgsc.bcm.edu	36	11	22355793	22355793	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
WT1	7490	hgsc.bcm.edu	36	11	32412945	32412945	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
OR8U1	219417	hgsc.bcm.edu	36	11	55899936	55899936	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SLC22A24	283238	hgsc.bcm.edu	36	11	62667532	62667532	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ALDH3B1	221	hgsc.bcm.edu	36	11	67542892	67542892	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ARAP1	116985	hgsc.bcm.edu	36	11	72115531	72115531	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CAPN5	726	hgsc.bcm.edu	36	11	76512526	76512526	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ATM	472	hgsc.bcm.edu	36	11	107705050	107705050	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ATM	472	hgsc.bcm.edu	36	11	107721696	107721696	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DLAT	1737	hgsc.bcm.edu	36	11	111401644	111401644	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
HIST1H1B	3009	hgsc.bcm.edu	36	6	27942799	27942799	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TREM2	54209	hgsc.bcm.edu	36	6	41237083	41237083	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MAP3K4	4216	hgsc.bcm.edu	36	6	161439371	161439371	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
T	6862	hgsc.bcm.edu	36	6	166500254	166500254	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
NLRP1	22861	hgsc.bcm.edu	36	17	5402776	5402776	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TP53	7157	hgsc.bcm.edu	36	17	7517845	7517845	+	Missense_Mutation	SNP	C	C	T	rs28934576	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
FLII	2314	hgsc.bcm.edu	36	17	18089811	18089811	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SARM1	23098	hgsc.bcm.edu	36	17	23736028	23736028	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
NF1	4763	hgsc.bcm.edu	36	17	26587107	26587107	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
NF1	4763	hgsc.bcm.edu	36	17	26686129	26686129	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DHX58	79132	hgsc.bcm.edu	36	17	37511387	37511387	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PYY	5697	hgsc.bcm.edu	36	17	39386211	39386211	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TEX14	56155	hgsc.bcm.edu	36	17	54043588	54043588	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ABCA9	10350	hgsc.bcm.edu	36	17	64558841	64558841	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TNRC6C	57690	hgsc.bcm.edu	36	17	73606152	73606152	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
AATK	9625	hgsc.bcm.edu	36	17	76708652	76708652	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SLC38A10	124565	hgsc.bcm.edu	36	17	76834401	76834401	+	Silent	SNP	A	A	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PIGP	51227	hgsc.bcm.edu	36	21	37366741	37366741	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DSCAM	1826	hgsc.bcm.edu	36	21	40306930	40306930	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SMG1	23049	hgsc.bcm.edu	36	16	18746878	18746878	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
OTOA	146183	hgsc.bcm.edu	36	16	21604110	21604110	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ABCC12	94160	hgsc.bcm.edu	36	16	46696625	46696625	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
NOD2	64127	hgsc.bcm.edu	36	16	49291017	49291017	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CDH8	1006	hgsc.bcm.edu	36	16	60245203	60245203	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
IRF8	3394	hgsc.bcm.edu	36	16	84511245	84511245	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TXNDC2	84203	hgsc.bcm.edu	36	18	9877416	9877416	+	Missense_Mutation	SNP	A	A	C	rs2240909	byHapMap	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SMAD4	4089	hgsc.bcm.edu	36	18	46829209	46829209	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SMAD4	4089	hgsc.bcm.edu	36	18	46845807	46845807	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CTNNB1	1499	hgsc.bcm.edu	36	3	41241171	41241171	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CTNNB1	1499	hgsc.bcm.edu	36	3	41241882	41241882	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ITIH3	3699	hgsc.bcm.edu	36	3	52805631	52805631	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZNF717	100131827	hgsc.bcm.edu	36	3	75869308	75869308	+	Missense_Mutation	SNP	C	C	A	rs2224824	by2Hit2Allele;byCluster	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
EPHA3	2042	hgsc.bcm.edu	36	3	89342233	89342233	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
OR5H15	403274	hgsc.bcm.edu	36	3	99370992	99370992	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
OR5H6	79295	hgsc.bcm.edu	36	3	99466187	99466187	+	Silent	SNP	T	T	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
C3orf52	79669	hgsc.bcm.edu	36	3	113287963	113287963	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
KIAA2018	205717	hgsc.bcm.edu	36	3	114858803	114858803	+	Silent	SNP	C	C	T	rs62265537	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MBD4	8930	hgsc.bcm.edu	36	3	130635660	130635660	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TRIM42	287015	hgsc.bcm.edu	36	3	141892663	141892663	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ATR	390502	hgsc.bcm.edu	36	3	143659180	143659180	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PIK3CA	5290	hgsc.bcm.edu	36	3	180405059	180405059	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PIK3CA	5290	hgsc.bcm.edu	36	3	180434584	180434584	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
EHHADH	1962	hgsc.bcm.edu	36	3	186393542	186393542	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
RFC4	5984	hgsc.bcm.edu	36	3	187990500	187990500	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TNK2	10188	hgsc.bcm.edu	36	3	197096284	197096284	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ATF7IP	55729	hgsc.bcm.edu	36	12	14469231	14469231	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
KRAS	3845	hgsc.bcm.edu	36	12	25289551	25289551	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PDZRN4	29951	hgsc.bcm.edu	36	12	40243688	40243688	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SLC38A2	54407	hgsc.bcm.edu	36	12	45043799	45043799	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MLL2	9757	hgsc.bcm.edu	36	12	47708152	47708152	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DDIT3	1649	hgsc.bcm.edu	36	12	56197024	56197024	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
E2F7	144455	hgsc.bcm.edu	36	12	75964122	75964122	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CMKLR1	1240	hgsc.bcm.edu	36	12	107210572	107210572	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CORO1C	23603	hgsc.bcm.edu	36	12	107566662	107566662	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ANKRD34C	390616	hgsc.bcm.edu	36	15	77373479	77373479	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
KLHL34	257240	hgsc.bcm.edu	36	X	21584540	21584540	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PCYT1B	9468	hgsc.bcm.edu	36	X	24503300	24503300	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CYBB	1536	hgsc.bcm.edu	36	X	37548189	37548189	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
GPKOW	27238	hgsc.bcm.edu	36	X	48866907	48866907	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PFKFB1	5207	hgsc.bcm.edu	36	X	55004071	55004071	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ACRC	93953	hgsc.bcm.edu	36	X	70740705	70740705	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ACRC	93953	hgsc.bcm.edu	36	X	70740735	70740735	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
THOC2	57187	hgsc.bcm.edu	36	X	122595503	122595503	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ODZ1	10178	hgsc.bcm.edu	36	X	123458555	123458555	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZNF280C	55609	hgsc.bcm.edu	36	X	129205263	129205263	+	Silent	SNP	A	A	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
GABRE	2564	hgsc.bcm.edu	36	X	150873941	150873941	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PLXNB3	5365	hgsc.bcm.edu	36	X	152694629	152694629	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
FLNA	2316	hgsc.bcm.edu	36	X	153246440	153246440	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DOK7	285489	hgsc.bcm.edu	36	4	3464927	3464927	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
BOD1L	259282	hgsc.bcm.edu	36	4	13211674	13211674	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
AFM	173	hgsc.bcm.edu	36	4	74570616	74570616	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
RAP1GDS1	5910	hgsc.bcm.edu	36	4	99433686	99433686	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DCHS2	54798	hgsc.bcm.edu	36	4	155463875	155463875	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SPOCK3	50859	hgsc.bcm.edu	36	4	168220241	168220241	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SORBS2	8470	hgsc.bcm.edu	36	4	186835550	186835550	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
C2orf16	84226	hgsc.bcm.edu	36	2	27658079	27658079	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
RASGRP3	25780	hgsc.bcm.edu	36	2	33602456	33602456	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
FAM98A	25940	hgsc.bcm.edu	36	2	33664164	33664164	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MSH2	4436	hgsc.bcm.edu	36	2	47490976	47490976	+	Silent	SNP	C	C	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MSH6	2956	hgsc.bcm.edu	36	2	47885607	47885607	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CD207	50489	hgsc.bcm.edu	36	2	70916343	70916343	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DYSF	8291	hgsc.bcm.edu	36	2	71606980	71606980	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
HK2	29911	hgsc.bcm.edu	36	2	74967281	74967281	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
REEP1	65055	hgsc.bcm.edu	36	2	86313427	86313427	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
GLI2	2736	hgsc.bcm.edu	36	2	121442816	121442816	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ACVR1C	130399	hgsc.bcm.edu	36	2	158114932	158114932	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SP3	6670	hgsc.bcm.edu	36	2	174482952	174482952	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PDE11A	50940	hgsc.bcm.edu	36	2	178202425	178202425	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TTN	7273	hgsc.bcm.edu	36	2	179182454	179182454	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MFSD6	54842	hgsc.bcm.edu	36	2	191010389	191010389	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CPO	130749	hgsc.bcm.edu	36	2	207535404	207535404	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TNS1	7145	hgsc.bcm.edu	36	2	218458744	218458744	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
EPHA4	2043	hgsc.bcm.edu	36	2	222055439	222055439	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
COL6A3	1293	hgsc.bcm.edu	36	2	237954363	237954363	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SLC1A1	6505	hgsc.bcm.edu	36	9	4534601	4534601	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TEK	7010	hgsc.bcm.edu	36	9	27148125	27148125	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PAPPA	5069	hgsc.bcm.edu	36	9	118073489	118073489	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CDK5RAP2	55755	hgsc.bcm.edu	36	9	122250133	122250133	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DAB2IP	153090	hgsc.bcm.edu	36	9	123568630	123568630	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
GARNL3	84253	hgsc.bcm.edu	36	9	129067080	129067080	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SOHLH1	402381	hgsc.bcm.edu	36	9	137726100	137726100	+	Silent	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
KCNT1	57582	hgsc.bcm.edu	36	9	137817971	137817971	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MTUS2	0	hgsc.bcm.edu	36	13	28497667	28497667	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SMAD9	4093	hgsc.bcm.edu	36	13	36325671	36325671	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
LCP1	9878	hgsc.bcm.edu	36	13	45615469	45615469	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
COL4A2	1284	hgsc.bcm.edu	36	13	109909247	109909247	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZNF25	219749	hgsc.bcm.edu	36	10	38285977	38285977	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SLC16A9	220963	hgsc.bcm.edu	36	10	61102601	61102601	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
OIT3	170392	hgsc.bcm.edu	36	10	74343229	74343229	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PTEN	5728	hgsc.bcm.edu	36	10	89614259	89614259	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PTEN	5728	hgsc.bcm.edu	36	10	89707668	89707668	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ABLIM1	3983	hgsc.bcm.edu	36	10	116235102	116235102	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CTBP2	1488	hgsc.bcm.edu	36	10	126705104	126705104	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MARCH11	441061	hgsc.bcm.edu	36	5	16120614	16120614	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PRDM9	56979	hgsc.bcm.edu	36	5	23563312	23563312	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZFR	51663	hgsc.bcm.edu	36	5	32436012	32436012	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
DDX4	54514	hgsc.bcm.edu	36	5	55091801	55091801	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
IPO11	51194	hgsc.bcm.edu	36	5	61801873	61801873	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ADAMTS6	11174	hgsc.bcm.edu	36	5	64661035	64661035	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MAST4	375449	hgsc.bcm.edu	36	5	66497726	66497726	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
COL4A3BP	10087	hgsc.bcm.edu	36	5	74712708	74712708	+	Silent	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
APC	324	hgsc.bcm.edu	36	5	112201816	112201816	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
APC	324	hgsc.bcm.edu	36	5	112203006	112203006	+	Silent	SNP	A	A	G	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
APC	324	hgsc.bcm.edu	36	5	112203133	112203133	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
APC	324	hgsc.bcm.edu	36	5	112203482	112203482	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
HARS2	92675	hgsc.bcm.edu	36	5	140053422	140053422	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
PCDHGB7	56099	hgsc.bcm.edu	36	5	140779289	140779289	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
SLC36A2	153201	hgsc.bcm.edu	36	5	150685109	150685109	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
GRIA1	2890	hgsc.bcm.edu	36	5	153006803	153006803	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ERGIC1	57222	hgsc.bcm.edu	36	5	172269294	172269294	+	Silent	SNP	C	C	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
KIF21A	55605	hgsc.bcm.edu	36	12	38000084	38000084	+	Splice_Site	SNP	T	T	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
LCE4A	199834	hgsc.bcm.edu	36	1	150948304	150948305	+	In_Frame_Ins	INS	-	-	AGCTCTGGGGGCTGCTGT	rs6143428	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
GPR137B	7107	hgsc.bcm.edu	36	1	234372833	234372835	+	In_Frame_Del	DEL	CTC	CTC	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	CTC	CTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
FMN2	56776	hgsc.bcm.edu	36	1	238437537	238437569	+	In_Frame_Del	DEL	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC	GCCCCCTCTACCCGGAGCGGGAATACCTCCTCC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
TNFAIP6	7130	hgsc.bcm.edu	36	2	151944292	151944292	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CCDC12	151903	hgsc.bcm.edu	36	3	46993204	46993206	+	In_Frame_Del	DEL	ACA	ACA	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	ACA	ACA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZNF717	100131827	hgsc.bcm.edu	36	3	75869732	75869733	+	Frame_Shift_Ins	INS	-	-	AAAT	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZNF717	100131827	hgsc.bcm.edu	36	3	75869734	75869735	+	In_Frame_Del	INS	-	-	CTT	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ZNF717	100131827	hgsc.bcm.edu	36	3	75869789	75869790	+	Frame_Shift_Del	DEL	CT	CT	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	CT	CT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
OR5K4	403278	hgsc.bcm.edu	36	3	99556282	99556282	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
ATR	390502	hgsc.bcm.edu	36	3	143757430	143757430	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MUC4	4585	hgsc.bcm.edu	36	3	196990687	196990734	+	In_Frame_Del	DEL	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC	GCTGGTGACAGGAAGAGGGGTGCCGTGACCTGTGGACACTGAGGAAGC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
APC	324	hgsc.bcm.edu	36	5	112203438	112203438	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CBWD6	644019	hgsc.bcm.edu	36	9	68508368	68508369	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
B3GNT6	192134	hgsc.bcm.edu	36	11	76429233	76429233	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MMP12	4321	hgsc.bcm.edu	36	11	102244003	102244004	+	Frame_Shift_Ins	INS	-	-	T	rs5794199	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CASP5	838	hgsc.bcm.edu	36	11	104384897	104384897	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
KRT2	3849	hgsc.bcm.edu	36	12	51331909	51331920	+	In_Frame_Del	DEL	ACCACCTCCTCT	ACCACCTCCTCT	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	ACCACCTCCTCT	ACCACCTCCTCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
OR6C76	390326	hgsc.bcm.edu	36	12	54107226	54107226	+	Frame_Shift_Del	DEL	A	A	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
C14orf169	79697	hgsc.bcm.edu	36	14	73027734	73027735	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
C14orf184	0	hgsc.bcm.edu	36	14	91110343	91110343	+	Frame_Shift_Del	DEL	C	C	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
MAP1A	4130	hgsc.bcm.edu	36	15	41608114	41608115	+	Frame_Shift_Ins	INS	-	-	T	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CDH8	1006	hgsc.bcm.edu	36	16	60409050	60409051	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
KRTAP19-6	337973	hgsc.bcm.edu	36	21	30835853	30835853	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
CDC42EP1	11135	hgsc.bcm.edu	36	22	36294355	36294375	+	In_Frame_Del	DEL	CAGCGCCTGCTGCAAACCCCT	CAGCGCCTGCTGCAAACCCCT	-	novel	unknown	TCGA-CL-5917-01A-11D-1657-10	TCGA-CL-5917-10A-01D-1657-10	CAGCGCCTGCTGCAAACCCCT	CAGCGCCTGCTGCAAACCCCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	0253e8de-943f-450c-ac93-6ead3669dca4	f6aff8fa-b2c3-49cb-8408-cca274cc7d28
