Extract Name	Hybridization Name	Data File	Comment [TCGA Archive Name]	Comment [TCGA Data Level]	Comment [TCGA Include for Analysis]	Protocol REF	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
TCGA-44-2656-01B-06D-A276-05	TCGA-44-2656-01B-06D-A276-05	jhu-usc.edu_LUAD.HumanMethylation450.1.lvl-3.TCGA-44-2656-01B-06D-A276-05.txt	jhu-usc.edu_LUAD.HumanMethylation450.Level_3.1.8.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2016012800	LUAD-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_LUAD-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0	yes
TCGA-44-2665-01B-06D-A276-05	TCGA-44-2665-01B-06D-A276-05	jhu-usc.edu_LUAD.HumanMethylation450.1.lvl-3.TCGA-44-2665-01B-06D-A276-05.txt	jhu-usc.edu_LUAD.HumanMethylation450.Level_3.1.8.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2016012800	LUAD-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_LUAD-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0	yes
TCGA-44-4112-01B-06D-A276-05	TCGA-44-4112-01B-06D-A276-05	jhu-usc.edu_LUAD.HumanMethylation450.17.lvl-3.TCGA-44-4112-01B-06D-A276-05.txt	jhu-usc.edu_LUAD.HumanMethylation450.Level_3.17.8.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2016012800	LUAD-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_LUAD-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0	yes
TCGA-44-6775-01C-02D-A276-05	TCGA-44-6775-01C-02D-A276-05	jhu-usc.edu_LUAD.HumanMethylation450.4.lvl-3.TCGA-44-6775-01C-02D-A276-05.txt	jhu-usc.edu_LUAD.HumanMethylation450.Level_3.4.8.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2016012800	LUAD-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_LUAD-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0	yes
TCGA-44-2668-01B-02D-A276-05	TCGA-44-2668-01B-02D-A276-05	jhu-usc.edu_LUAD.HumanMethylation450.1.lvl-3.TCGA-44-2668-01B-02D-A276-05.txt	jhu-usc.edu_LUAD.HumanMethylation450.Level_3.1.8.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2016012800	LUAD-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_LUAD-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0	yes
TCGA-44-6147-01B-06D-A276-05	TCGA-44-6147-01B-06D-A276-05	jhu-usc.edu_LUAD.HumanMethylation450.3.lvl-3.TCGA-44-6147-01B-06D-A276-05.txt	jhu-usc.edu_LUAD.HumanMethylation450.Level_3.3.8.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2016012800	LUAD-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_LUAD-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0	yes
TCGA-44-3918-01B-02D-A276-05	TCGA-44-3918-01B-02D-A276-05	jhu-usc.edu_LUAD.HumanMethylation450.17.lvl-3.TCGA-44-3918-01B-02D-A276-05.txt	jhu-usc.edu_LUAD.HumanMethylation450.Level_3.17.8.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2016012800	LUAD-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_LUAD-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0	yes
TCGA-44-2666-01B-02D-A276-05	TCGA-44-2666-01B-02D-A276-05	jhu-usc.edu_LUAD.HumanMethylation450.1.lvl-3.TCGA-44-2666-01B-02D-A276-05.txt	jhu-usc.edu_LUAD.HumanMethylation450.Level_3.1.8.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2016012800	LUAD-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_LUAD-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0	yes
TCGA-44-6146-01B-04D-A276-05	TCGA-44-6146-01B-04D-A276-05	jhu-usc.edu_LUAD.HumanMethylation450.3.lvl-3.TCGA-44-6146-01B-04D-A276-05.txt	jhu-usc.edu_LUAD.HumanMethylation450.Level_3.3.8.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2016012800	LUAD-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_LUAD-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0	yes
TCGA-44-3917-01B-02D-A276-05	TCGA-44-3917-01B-02D-A276-05	jhu-usc.edu_LUAD.HumanMethylation450.17.lvl-3.TCGA-44-3917-01B-02D-A276-05.txt	jhu-usc.edu_LUAD.HumanMethylation450.Level_3.17.8.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2016012800	LUAD-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_LUAD-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0	yes
TCGA-44-5645-01B-04D-A276-05	TCGA-44-5645-01B-04D-A276-05	jhu-usc.edu_LUAD.HumanMethylation450.2.lvl-3.TCGA-44-5645-01B-04D-A276-05.txt	jhu-usc.edu_LUAD.HumanMethylation450.Level_3.2.8.0	Level_3	yes	broad.mit.edu:mirror_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data:data_format_normalizer:01	urn:lsid:broadinstitute.org:cancer.genome.analysis:00141:30	Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data_2016012800	LUAD-FFPE.methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.data.txt	Firehose-Standard-Data	Level_3	txt	gdac.broadinstitute.org_LUAD-FFPE.Merge_methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data.Level_3.2016012800.0.0	yes
