Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID
ADAM22	53616	hgsc.bcm.edu	36	7	87648798	87648798	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CALCR	799	hgsc.bcm.edu	36	7	92893730	92893730	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
C20orf117	140710	hgsc.bcm.edu	36	20	34855475	34855475	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
BPI	671	hgsc.bcm.edu	36	20	36398976	36398976	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
MAPK1	5594	hgsc.bcm.edu	36	22	20490202	20490202	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
KREMEN1	83999	hgsc.bcm.edu	36	22	27824867	27824867	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
RTN1	6252	hgsc.bcm.edu	36	14	59282533	59282533	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
TSHR	7253	hgsc.bcm.edu	36	14	80679091	80679091	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
ABCA7	10347	hgsc.bcm.edu	36	19	1004334	1004334	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
PTPRS	5802	hgsc.bcm.edu	36	19	5195269	5195269	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
OR7C1	26664	hgsc.bcm.edu	36	19	14771584	14771584	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
FCGBP	8857	hgsc.bcm.edu	36	19	45060393	45060393	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CCDC114	93233	hgsc.bcm.edu	36	19	53507167	53507167	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
PRKCG	5582	hgsc.bcm.edu	36	19	59086752	59086752	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
HOOK3	84376	hgsc.bcm.edu	36	8	42938657	42938657	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CSMD3	114788	hgsc.bcm.edu	36	8	113368628	113368628	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
BAI1	575	hgsc.bcm.edu	36	8	143611776	143611776	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
NPHP4	261734	hgsc.bcm.edu	36	1	5857618	5857618	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
NECAP2	55707	hgsc.bcm.edu	36	1	16650944	16650944	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
TAL1	6886	hgsc.bcm.edu	36	1	47458218	47458218	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
LPPR4	9890	hgsc.bcm.edu	36	1	99526242	99526242	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
FLG	2312	hgsc.bcm.edu	36	1	150546625	150546625	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SPTA1	6708	hgsc.bcm.edu	36	1	156878849	156878849	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
HSD17B7	158160	hgsc.bcm.edu	36	1	161039937	161039937	+	Silent	SNP	G	G	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
MAEL	84944	hgsc.bcm.edu	36	1	165257704	165257704	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
ASTN1	460	hgsc.bcm.edu	36	1	175104729	175104729	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
LYST	1130	hgsc.bcm.edu	36	1	233907505	233907505	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
NID1	4811	hgsc.bcm.edu	36	1	234211549	234211549	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
OR51B4	79339	hgsc.bcm.edu	36	11	5279076	5279076	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SYT9	143425	hgsc.bcm.edu	36	11	7291542	7291542	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
MADD	8567	hgsc.bcm.edu	36	11	47307193	47307193	+	Silent	SNP	C	C	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
OR4S1	256148	hgsc.bcm.edu	36	11	48285216	48285216	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SF1	7536	hgsc.bcm.edu	36	11	64300622	64300622	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
C11orf30	56946	hgsc.bcm.edu	36	11	75852606	75852606	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
PICALM	8301	hgsc.bcm.edu	36	11	85411135	85411135	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
GRIA4	2893	hgsc.bcm.edu	36	11	105302711	105302711	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
ATM	472	hgsc.bcm.edu	36	11	107603562	107603562	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SYCP2L	221711	hgsc.bcm.edu	36	6	11002102	11002102	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
DAXX	1616	hgsc.bcm.edu	36	6	33395475	33395475	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
GSTA2	2939	hgsc.bcm.edu	36	6	52724382	52724382	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
LMBRD1	55788	hgsc.bcm.edu	36	6	70467422	70467422	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
MDN1	23195	hgsc.bcm.edu	36	6	90439773	90439773	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
TP53	7157	hgsc.bcm.edu	36	17	7517866	7517866	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
MYH2	4620	hgsc.bcm.edu	36	17	10384724	10384724	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
AP2B1	163	hgsc.bcm.edu	36	17	30975657	30975657	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
KRTAP4-8	728224	hgsc.bcm.edu	36	17	36507580	36507580	+	Missense_Mutation	SNP	A	A	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
KRTAP4-11	653240	hgsc.bcm.edu	36	17	36527837	36527837	+	Missense_Mutation	SNP	T	T	C	rs425755	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
STH	246744	hgsc.bcm.edu	36	17	41432501	41432501	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SNF8	11267	hgsc.bcm.edu	36	17	44373359	44373359	+	Missense_Mutation	SNP	T	T	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
C2CD2	25966	hgsc.bcm.edu	36	21	42200205	42200205	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SIK1	150094	hgsc.bcm.edu	36	21	43662759	43662759	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
ADCY9	115	hgsc.bcm.edu	36	16	3955910	3955910	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SMG1	23049	hgsc.bcm.edu	36	16	18790278	18790278	+	Silent	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
GTF3C1	2975	hgsc.bcm.edu	36	16	27407090	27407090	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
OSBPL1A	114876	hgsc.bcm.edu	36	18	20151126	20151126	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
GRM7	2917	hgsc.bcm.edu	36	3	7163223	7163223	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
ITIH4	3700	hgsc.bcm.edu	36	3	52834968	52834968	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
NFKBIZ	64332	hgsc.bcm.edu	36	3	103057326	103057326	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
STXBP5L	9515	hgsc.bcm.edu	36	3	122111126	122111126	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CLSTN2	64084	hgsc.bcm.edu	36	3	141764424	141764424	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
GPR87	53836	hgsc.bcm.edu	36	3	152495151	152495151	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SLITRK3	22865	hgsc.bcm.edu	36	3	166388817	166388817	+	Silent	SNP	C	C	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
PRKCI	5584	hgsc.bcm.edu	36	3	171496414	171496414	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
DCP1B	196513	hgsc.bcm.edu	36	12	1972716	1972716	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CACNA1C	775	hgsc.bcm.edu	36	12	2590061	2590061	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
KRAS	3845	hgsc.bcm.edu	36	12	25289561	25289561	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
OR6C68	403284	hgsc.bcm.edu	36	12	54172764	54172764	+	Silent	SNP	T	T	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
TMEM132C	92293	hgsc.bcm.edu	36	12	127465780	127465780	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
RYR3	6263	hgsc.bcm.edu	36	15	31642467	31642467	+	Silent	SNP	C	C	T	rs16972317	byFrequency;byHapMap	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CXorf38	159013	hgsc.bcm.edu	36	X	40381333	40381333	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
NHSL2	340527	hgsc.bcm.edu	36	X	71276862	71276862	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
GABRQ	55879	hgsc.bcm.edu	36	X	151568966	151568966	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
EPHA5	2044	hgsc.bcm.edu	36	4	65913358	65913358	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
LARP7	51574	hgsc.bcm.edu	36	4	113791074	113791074	+	Missense_Mutation	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
MAP9	79884	hgsc.bcm.edu	36	4	156500846	156500846	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
TLR3	7098	hgsc.bcm.edu	36	4	187241240	187241240	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
BIRC6	57448	hgsc.bcm.edu	36	2	32543693	32543693	+	Silent	SNP	A	A	G	rs35682129	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
GLI2	2736	hgsc.bcm.edu	36	2	121463176	121463176	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
LRP1B	53353	hgsc.bcm.edu	36	2	140918694	140918694	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
MYO3B	140469	hgsc.bcm.edu	36	2	170972551	170972551	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
TTN	7273	hgsc.bcm.edu	36	2	179145781	179145781	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CERKL	375298	hgsc.bcm.edu	36	2	182177034	182177034	+	Missense_Mutation	SNP	A	A	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
FASTKD2	22868	hgsc.bcm.edu	36	2	207361087	207361087	+	Silent	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
IDH1	3417	hgsc.bcm.edu	36	2	208821455	208821455	+	Missense_Mutation	SNP	T	T	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
UNC80	285175	hgsc.bcm.edu	36	2	210494626	210494626	+	Missense_Mutation	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
PAX5	5079	hgsc.bcm.edu	36	9	37010739	37010739	+	Missense_Mutation	SNP	C	C	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SNAPC4	6621	hgsc.bcm.edu	36	9	138397537	138397537	+	Silent	SNP	G	G	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CDK8	1024	hgsc.bcm.edu	36	13	25868427	25868427	+	Missense_Mutation	SNP	G	G	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CDK8	1024	hgsc.bcm.edu	36	13	25868447	25868447	+	Missense_Mutation	SNP	G	G	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
FRY	10129	hgsc.bcm.edu	36	13	31706806	31706806	+	Missense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
LHFP	10186	hgsc.bcm.edu	36	13	39073189	39073189	+	Silent	SNP	A	A	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	A	A					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SLITRK5	26050	hgsc.bcm.edu	36	13	87127447	87127447	+	Silent	SNP	C	C	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
APC	324	hgsc.bcm.edu	36	5	112203538	112203538	+	Nonsense_Mutation	SNP	C	C	T	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
FAT2	2196	hgsc.bcm.edu	36	5	150881208	150881208	+	Silent	SNP	T	T	G	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
TSKS	60385	hgsc.bcm.edu	36	19	54943238	54943238	+	Splice_Site	SNP	C	C	A	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	C	C					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
TMEM37	140738	hgsc.bcm.edu	36	2	119911121	119911122	+	In_Frame_Ins	INS	-	-	GTGTGC	rs3217464	byCluster	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SPATA3	130560	hgsc.bcm.edu	36	2	231569277	231569303	+	In_Frame_Del	DEL	CAGCAGCCTAGCCCTGAATCCACACCA	CAGCAGCCTAGCCCTGAATCCACACCA	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	CAGCAGCCTAGCCCTGAATCCACACCA	CAGCAGCCTAGCCCTGAATCCACACCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
FANCD2	2177	hgsc.bcm.edu	36	3	10063408	10063408	+	Frame_Shift_Del	DEL	G	G	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	G	G					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
MUC4	4585	hgsc.bcm.edu	36	3	196994126	196994173	+	In_Frame_Del	DEL	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT	GTGGATGCTGAGGAAGGGCTGGTGACATGAAGAGGGGTGGCGTGACCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CYP21A2	1589	hgsc.bcm.edu	36	6	32114194	32114196	+	In_Frame_Del	DEL	CTG	CTG	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	CTG	CTG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
SLC22A1	6580	hgsc.bcm.edu	36	6	160480888	160480895	+	In_Frame_Del	DEL	TGGTAAGT	TGGTAAGT	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	TGGTAAGT	TGGTAAGT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CADM1	23705	hgsc.bcm.edu	36	11	114880240	114880245	+	In_Frame_Del	DEL	AGCCGG	AGCCGG	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	AGCCGG	AGCCGG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
IFI27	3429	hgsc.bcm.edu	36	14	93651883	93651884	+	In_Frame_Ins	INS	-	-	GGCCATGGC	rs3833507	byCluster	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CCDC144NL	339184	hgsc.bcm.edu	36	17	20709348	20709348	+	Frame_Shift_Del	DEL	T	T	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	T	T					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
CCDC144NL	339184	hgsc.bcm.edu	36	17	20709354	20709355	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
MLLT6	4302	hgsc.bcm.edu	36	17	34117627	34117633	+	Frame_Shift_Del	DEL	CGTGCCT	CGTGCCT	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	CGTGCCT	CGTGCCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
UHRF1	29128	hgsc.bcm.edu	36	19	4905679	4905680	+	Frame_Shift_Ins	INS	-	-	C	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	-	-					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
FAM71E2	284418	hgsc.bcm.edu	36	19	60561692	60561715	+	In_Frame_Del	DEL	GCTCCTTCATCTCGCCCCATGGCT	GCTCCTTCATCTCGCCCCATGGCT	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	GCTCCTTCATCTCGCCCCATGGCT	GCTCCTTCATCTCGCCCCATGGCT					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
NINL	22981	hgsc.bcm.edu	36	20	25405050	25405055	+	In_Frame_Del	DEL	CTCCCA	CTCCCA	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	CTCCCA	CTCCCA					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
KRTAP10-7	386675	hgsc.bcm.edu	36	21	44845084	44845098	+	Frame_Shift_Del	DEL	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	CTGCTGCGCCCCCAG	CTGCTGCGCCCCCAG					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
VCX2	51480	hgsc.bcm.edu	36	X	8098165	8098168	+	Frame_Shift_Del	DEL	CCTC	CCTC	-	novel	unknown	TCGA-F5-6702-01A-11D-1826-10	TCGA-F5-6702-10A-01D-1826-10	CCTC	CCTC					Unknown	Unknown	Somatic	Phase_I	Capture				Illumina HiSeq	7e34a04a-ec52-44dc-857c-6ffa656387f4	9c18fd3a-c6b4-4981-9398-e06c753e5b43
