Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	 ensembl_gene_id	tier	dbSNP	GMAF	n_ref_count	n_alt_count	normal_vaf	t_ref_count	t_alt_count	tumor_vaf	n_ref_count_val	n_alt_count_val	normal_vaf_val	t_ref_count_val	t_alt_count_val	tumor_vaf_val
NOL12	0	genome.wustl.edu	37	22	38084916	38084916	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	22	38084916	38084916	C	T	SNP	NOL12	ENST00000359114	human	ensembl	74_37	+1	known	missense	c.298	p.H100Y	1.000	pfam_Nucleolar_protein_12	pfam_Nucleolar_protein_12	-	no_errors	NOL12	HGNC	ENSG00000100101	tier1	-	-	37	0	0.00	25	12	32.43	53	0	0.00	22	18	43.90
MED12L	0	genome.wustl.edu	37	3	151083705	151083705	+	Silent	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	3	151083705	151083705	C	T	SNP	MED12L	ENST00000474524	human	ensembl	74_37	+1	known	silent	c.3148	p.L1050	1.000	NULL	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893	tier1	-	-	96	0	0.00	89	27	23.28	75	1	1.32	40	16	28.57
SP91	0	genome.wustl.edu	37	6	84290167	84290167	+	Splice_Site	SNP	A	A	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	6	84290167	84290167	A	T	SNP	SP91	ENST00000369694	human	ensembl	74_37	-1	known	splice_site	c.2299+2	e23+2	1.000	-	-	-	no_errors	SP91	HGNC	ENSG00000065609	tier1	-	-	45	0	0.00	35	17	32.69	33	0	0.00	26	10	27.78
ZNF768	0	genome.wustl.edu	37	16	30536059	30536059	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	16	30536059	30536059	G	A	SNP	ZNF768	ENST00000380412	human	ensembl	74_37	-1	known	missense	c.1402	p.R468C	0.955	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_R_pol_II_repeat_euk,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF768	HGNC	ENSG00000169957	tier1	-	-	62	0	0.00	72	28	27.72	15	0	0.00	21	9	30.00
DCLK2	0	genome.wustl.edu	37	4	151141922	151141922	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	4	151141922	151141922	G	A	SNP	DCLK2	ENST00000302176	human	ensembl	74_37	+1	known	missense	c.1175	p.S392N	1.000	NULL	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK2	HGNC	ENSG00000170390	tier1	-	-	45	0	0.00	30	6	16.67	84	0	0.00	63	18	22.22
DCAF8L1	0	genome.wustl.edu	37	X	27997691	27997691	+	Silent	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	X	27997691	27997691	G	A	SNP	DCAF8L1	ENST00000441525	human	ensembl	74_37	-1	known	silent	c.1761	p.S587	0.782	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF8L1	HGNC	ENSG00000226372	tier1	-	-	35	0	0.00	51	24	32.00	55	0	0.00	77	33	30.00
MS4A2	0	genome.wustl.edu	37	11	59857896	59857896	+	Missense_Mutation	SNP	A	A	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	11	59857896	59857896	A	C	SNP	MS4A2	ENST00000278888	human	ensembl	74_37	+1	known	missense	c.274	p.I92L	0.000	pfam_CD20-like	pfam_CD20-like	-	no_errors	MS4A2	HGNC	ENSG00000149534	tier1	-	-	79	0	0.00	49	13	20.97	116	1	0.85	64	18	21.95
ARHGEF26	0	genome.wustl.edu	37	3	153909093	153909093	+	Silent	SNP	C	C	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	3	153909093	153909093	C	A	SNP	ARHGEF26	ENST00000356448	human	ensembl	74_37	+1	known	silent	c.1656	p.S552	0.138	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF26	HGNC	ENSG00000114790	tier1	-	-	82	0	0.00	68	16	19.05	98	0	0.00	95	14	12.84
PSMC2	0	genome.wustl.edu	37	7	102988198	102988198	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	7	102988198	102988198	G	T	SNP	PSMC2	ENST00000292644	human	ensembl	74_37	+1	known	nonsense	c.40	p.E14*	1.000	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC2	HGNC	ENSG00000161057	tier1	-	-	31	0	0.00	29	4	12.12	91	0	0.00	61	22	26.51
GREM2	0	genome.wustl.edu	37	1	240656641	240656641	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	240656641	240656641	C	A	SNP	GREM2	ENST00000318160	human	ensembl	74_37	-1	known	missense	c.135	p.W45C	1.000	pirsf_Gremlin_precursor	pfam_DAN,pfam_Cys_knot,smart_Cys_knot_C,pirsf_Gremlin_precursor,pfscan_Cys_knot_C	-	no_errors	GREM2	HGNC	ENSG00000180875	tier1	-	-	86	0	0.00	60	35	36.84	14	0	0.00	13	7	33.33
CLYBL	0	genome.wustl.edu	37	13	100518604	100518604	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	13	100518604	100518604	C	T	SNP	CLYBL	ENST00000339105	human	ensembl	74_37	+1	known	nonsense	c.745	p.R249*	0.387	pfam_Aldehyde-lyase_domain,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,pirsf_Citrate_lyase_beta	pfam_Aldehyde-lyase_domain,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,pirsf_Citrate_lyase_beta	-	no_errors	CLYBL	HGNC	ENSG00000125246	tier1	-	-	93	0	0.00	28	46	62.16	84	0	0.00	26	31	54.39
CHD8	0	genome.wustl.edu	37	14	21894403	21894403	+	Splice_Site	SNP	T	T	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	14	21894403	21894403	T	G	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	splice_site	c.1602-2	e4-2	1.000	-	-	-	no_errors	CHD8	HGNC	ENSG00000100888	tier1	-	-	18	0	0.00	34	7	17.07	111	0	0.00	134	19	12.42
PCDHA6	0	genome.wustl.edu	37	5	140208144	140208144	+	Silent	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	5	140208144	140208144	C	T	SNP	PCDHA6	ENST00000529310	human	ensembl	74_37	+1	known	silent	c.468	p.G156	0.996	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA6	HGNC	ENSG00000081842	tier1	-	-	51	0	0.00	40	9	18.37	96	0	0.00	80	18	18.37
ZNF81	0	genome.wustl.edu	37	X	47775958	47775958	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	X	47775958	47775958	A	G	SNP	ZNF81	ENST00000338637	human	ensembl	74_37	+1	known	missense	c.1913	p.Y638C	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF81	HGNC	ENSG00000197779	tier1	-	-	39	0	0.00	79	15	15.96	73	0	0.00	124	18	12.68
C4BPA	0	genome.wustl.edu	37	1	207304944	207304944	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	207304944	207304944	A	T	SNP	C4BPA	ENST00000367070	human	ensembl	74_37	+1	known	missense	c.943	p.R315W	0.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	C4BPA	HGNC	ENSG00000123838	tier1	-	-	66	0	0.00	53	25	32.05	117	0	0.00	80	17	17.53
GREM2	0	genome.wustl.edu	37	1	240656642	240656642	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	240656642	240656642	C	A	SNP	GREM2	ENST00000318160	human	ensembl	74_37	-1	known	missense	c.134	p.W45L	1.000	pirsf_Gremlin_precursor	pfam_DAN,pfam_Cys_knot,smart_Cys_knot_C,pirsf_Gremlin_precursor,pfscan_Cys_knot_C	-	no_errors	GREM2	HGNC	ENSG00000180875	tier1	-	-	89	0	0.00	61	35	36.46	14	0	0.00	14	6	28.57
ENSG00000260628	0	genome.wustl.edu	37	16	31995067	31995067	+	R	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	16	31995067	31995067	C	T	SNP	ENSG00000260628	ENST00000568570	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-1166P10.1	Clone_based_vega_gene	ENSG00000260628	tier1	-	-	45	0	0.00	45	15	25.00	16	0	0.00	28	6	17.65
DSG4	0	genome.wustl.edu	37	18	28993106	28993106	+	Nonsense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	18	28993106	28993106	C	T	SNP	DSG4	ENST00000359747	human	ensembl	74_37	+1	known	nonsense	c.2728	p.Q910*	1.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmosomal_cadherin	-	no_errors	DSG4	HGNC	ENSG00000175065	tier1	-	-	32	0	0.00	29	6	17.14	91	0	0.00	61	16	20.78
PTPRO	0	genome.wustl.edu	37	12	15654724	15654724	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	12	15654724	15654724	A	T	SNP	PTPRO	ENST00000281171	human	ensembl	74_37	+1	known	missense	c.832	p.N278Y	0.958	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRO	HGNC	ENSG00000151490	tier1	-	-	75	0	0.00	52	18	25.71	114	0	0.00	62	23	27.06
SERPINB13	0	genome.wustl.edu	37	18	61260203	61260203	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	18	61260203	61260203	A	T	SNP	SERPINB13	ENST00000344731	human	ensembl	74_37	+1	known	missense	c.470	p.N157I	0.955	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB13	HGNC	ENSG00000197641	tier1	-	-	57	0	0.00	57	8	12.31	82	0	0.00	72	25	25.77
CEACAM20	0	genome.wustl.edu	37	19	45029236	45029236	+	R	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	19	45029236	45029236	G	A	SNP	CEACAM20	ENST00000316962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CEACAM20	HGNC	ENSG00000176395	tier1	-	-	16	0	0.00	32	24	42.86	102	0	0.00	100	167	62.55
HMCN1	0	genome.wustl.edu	37	1	186086748	186086748	+	Silent	SNP	G	G	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	186086748	186086748	G	C	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	silent	c.11841	p.L3947	0.983	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	37	0	0.00	18	12	40.00	115	0	0.00	60	18	23.08
OR2T12	0	genome.wustl.edu	37	1	248458375	248458375	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	248458375	248458375	G	A	SNP	OR2T12	ENST00000317996	human	ensembl	74_37	-1	known	missense	c.506	p.A169V	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T12	HGNC	ENSG00000177201	tier1	-	-	76	0	0.00	46	8	14.81	93	0	0.00	70	23	24.73
PRNT	0	genome.wustl.edu	37	20	4713202	4713202	+	Missense_Mutation	SNP	G	G	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	20	4713202	4713202	G	C	SNP	PRNT	ENST00000326539	human	ensembl	74_37	-1	known	missense	c.121	p.P41A	0.015	NULL	NULL	-	no_errors	PRNT	HGNC	ENSG00000180259	tier1	-	-	40	0	0.00	17	3	15.00	118	0	0.00	30	4	11.76
FER1L6	0	genome.wustl.edu	37	8	125061960	125061960	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	8	125061960	125061960	C	G	SNP	FER1L6	ENST00000399018	human	ensembl	74_37	+1	known	missense	c.2837	p.S946C	0.999	superfamily_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,superfamily_ABC1_TM_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	FER1L6	HGNC	ENSG00000214814	tier1	-	-	51	0	0.00	71	13	15.29	81	0	0.00	96	11	10.19
IGF2R	0	genome.wustl.edu	37	6	160461743	160461743	+	Silent	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	6	160461743	160461743	G	T	SNP	IGF2R	ENST00000356956	human	ensembl	74_37	+1	known	silent	c.1467	p.L489	1.000	pfam_CIMR,superfamily_Man6P_isomerase_rcpt-bd_dom	pfam_CIMR,pfam_FN_type2_col-bd,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	-	no_errors	IGF2R	HGNC	ENSG00000197081	tier1	-	-	63	0	0.00	43	9	17.31	43	0	0.00	35	15	30.00
CYP2C18	0	genome.wustl.edu	37	10	96484253	96484253	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	10	96484253	96484253	C	A	SNP	CYP2C18	ENST00000285979	human	ensembl	74_37	+1	known	missense	c.1112	p.T371N	0.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2C18	HGNC	ENSG00000108242	tier1	-	-	62	0	0.00	54	11	16.92	90	0	0.00	59	27	31.40
AKAP1	0	genome.wustl.edu	37	17	55189859	55189859	+	Silent	SNP	A	A	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	17	55189859	55189859	A	G	SNP	AKAP1	ENST00000337714	human	ensembl	74_37	+1	known	silent	c.1983	p.Q661	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_Tudor,pfam_KH_dom_type_1,smart_KH_dom,smart_Tudor,pfscan_Tudor,pfscan_KH_dom_type_1	-	no_errors	AKAP1	HGNC	ENSG00000121057	tier1	-	-	49	0	0.00	37	9	19.57	132	0	0.00	75	13	14.77
CYSLTR1	0	genome.wustl.edu	37	X	77528983	77528983	+	Silent	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	X	77528983	77528983	G	T	SNP	CYSLTR1	ENST00000373304	human	ensembl	74_37	-1	known	silent	c.261	p.G87	0.823	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_Cyst_leuk_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_Cyst_leuk_rcpt,prints_CLT1_recept,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	CYSLTR1	HGNC	ENSG00000173198	tier1	-	-	26	0	0.00	17	6	26.09	46	0	0.00	29	7	19.44
BEND7	0	genome.wustl.edu	37	10	13541962	13541962	+	Silent	SNP	G	G	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	10	13541962	13541962	G	C	SNP	BEND7	ENST00000396900	human	ensembl	74_37	-1	known	silent	c.264	p.P88	1.000	NULL	pfam_BEN_domain	-	no_errors	BEND7	HGNC	ENSG00000165626	tier1	-	-	56	0	0.00	65	15	18.75	111	0	0.00	97	21	17.80
ZNF507	0	genome.wustl.edu	37	19	32873817	32873817	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	19	32873817	32873817	C	G	SNP	ZNF507	ENST00000311921	human	ensembl	74_37	+1	known	missense	c.2690	p.S897C	0.022	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF507	HGNC	ENSG00000168813	tier1	-	-	35	0	0.00	33	4	10.81	80	0	0.00	86	21	19.63
PRDM11	0	genome.wustl.edu	37	11	45203362	45203362	+	Silent	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	11	45203362	45203362	C	T	SNP	PRDM11	ENST00000263765	human	ensembl	74_37	+1	known	silent	c.147	p.A49	0.628	NULL	pfscan_SET_dom	-	no_errors	PRDM11	HGNC	ENSG00000019485	tier1	-	-	24	0	0.00	22	16	42.11	63	0	0.00	83	24	22.43
PCDHA8	0	genome.wustl.edu	37	5	140221827	140221827	+	Silent	SNP	T	T	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	5	140221827	140221827	T	C	SNP	PCDHA8	ENST00000531613	human	ensembl	74_37	+1	known	silent	c.921	p.N307	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA8	HGNC	ENSG00000204962	tier1	-	-	92	0	0.00	89	15	14.42	84	0	0.00	63	9	12.50
ADAM3A	0	genome.wustl.edu	37	8	39363347	39363347	+	R	SNP	T	T	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	8	39363347	39363347	T	A	SNP	ADAM3A	ENST00000424066	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ADAM3A	HGNC	ENSG00000197475	tier1	-	-	70	0	0.00	24	15	38.46	59	0	0.00	22	6	20.69
SLC22A25	0	genome.wustl.edu	37	11	62996923	62996923	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	11	62996923	62996923	T	A	SNP	SLC22A25	ENST00000306494	human	ensembl	74_37	-1	known	missense	c.202	p.S68C	0.364	pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A25	HGNC	ENSG00000196600	tier1	-	-	54	0	0.00	34	11	24.44	90	0	0.00	59	16	21.33
TRPM6	0	genome.wustl.edu	37	9	77377199	77377199	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	9	77377199	77377199	G	A	SNP	TRPM6	ENST00000451710	human	ensembl	74_37	-1	known	missense	c.4388	p.T1463I	0.227	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM6	HGNC	ENSG00000119121	tier1	-	-	31	0	0.00	32	13	28.89	116	1	0.85	63	57	47.11
PAPPA	0	genome.wustl.edu	37	9	118997486	118997486	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	9	118997486	118997486	C	T	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	missense	c.2302	p.P768S	0.996	superfamily_Fibronectin_type3	pfam_Sushi_SCR_CCP,pfam_Notch_dom,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA	HGNC	ENSG00000182752	tier1	-	-	34	0	0.00	34	11	24.44	91	0	0.00	53	23	30.26
IL23A	0	genome.wustl.edu	37	12	56732989	56732989	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	12	56732989	56732989	T	A	SNP	IL23A	ENST00000228534	human	ensembl	74_37	+1	known	missense	c.161	p.M54K	0.542	superfamily_4_helix_cytokine-like_core	pfam_IL-6/IL-23/GCSF/MGF,superfamily_4_helix_cytokine-like_core	-	no_errors	IL23A	HGNC	ENSG00000110944	tier1	-	-	26	0	0.00	23	5	17.86	44	0	0.00	42	10	19.23
KIF20B	0	genome.wustl.edu	37	10	91492692	91492692	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	10	91492692	91492692	C	G	SNP	KIF20B	ENST00000416354	human	ensembl	74_37	+1	known	missense	c.2424	p.N808K	0.004	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF20B	HGNC	ENSG00000138182	tier1	-	-	79	0	0.00	74	17	18.68	58	0	0.00	48	8	14.29
PADI2	0	genome.wustl.edu	37	1	17395742	17395742	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	17395742	17395742	C	T	SNP	PADI2	ENST00000375486	human	ensembl	74_37	-1	known	missense	c.1795	p.G599S	1.000	pfam_PAD_C,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI2	HGNC	ENSG00000117115	tier1	-	-	31	0	0.00	54	9	14.29	55	0	0.00	77	18	18.95
EYS	0	genome.wustl.edu	37	6	65707520	65707520	+	Silent	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	6	65707520	65707520	G	A	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	silent	c.2214	p.I738	0.136	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	49	0	0.00	58	14	19.44	92	0	0.00	87	26	23.01
EPHA8	0	genome.wustl.edu	37	1	22915658	22915658	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	22915658	22915658	C	A	SNP	EPHA8	ENST00000166244	human	ensembl	74_37	+1	known	missense	c.1274	p.P425H	0.993	pirsf_Tyr_kinase_ephrin_rcpt,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA8	HGNC	ENSG00000070886	tier1	-	-	60	0	0.00	82	17	17.17	37	0	0.00	36	13	26.53
WNK1	0	genome.wustl.edu	37	12	1009691	1009691	+	Silent	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	12	1009691	1009691	C	T	SNP	WNK1	ENST00000530271	human	ensembl	74_37	+1	known	silent	c.7992	p.T2664	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK1	HGNC	ENSG00000060237	tier1	-	-	23	0	0.00	64	53	45.30	65	0	0.00	135	114	45.78
AXDND1	0	genome.wustl.edu	37	1	179380379	179380379	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	179380379	179380379	C	G	SNP	AXDND1	ENST00000367618	human	ensembl	74_37	+1	known	missense	c.1208	p.A403G	1.000	NULL	pfam_Axonemal_dynein_light_chain	-	no_errors	AXDND1	HGNC	ENSG00000162779	tier1	-	-	142	0	0.00	134	28	17.28	105	0	0.00	81	22	21.36
ANKRD31	0	genome.wustl.edu	37	5	74408388	74408388	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	5	74408388	74408388	T	C	SNP	ANKRD31	ENST00000274361	human	ensembl	74_37	-1	known	missense	c.4022	p.E1341G	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD31	HGNC	ENSG00000145700	tier1	-	-	50	0	0.00	42	13	23.64	44	0	0.00	46	11	18.97
OR6C75	0	genome.wustl.edu	37	12	55759380	55759380	+	Silent	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	12	55759380	55759380	G	T	SNP	OR6C75	ENST00000343399	human	ensembl	74_37	+1	known	silent	c.486	p.L162	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C75	HGNC	ENSG00000187857	tier1	-	-	21	0	0.00	24	7	22.58	86	0	0.00	75	16	17.58
PKHD1L1	0	genome.wustl.edu	37	8	110527530	110527530	+	Silent	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	8	110527530	110527530	C	T	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	silent	c.11685	p.Y3895	0.000	NULL	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1	-	-	83	0	0.00	93	16	14.68	109	0	0.00	106	21	16.54
RAB27A	0	genome.wustl.edu	37	15	55497751	55497751	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	15	55497751	55497751	G	A	SNP	RAB27A	ENST00000336787	human	ensembl	74_37	-1	known	missense	c.620	p.T207M	0.000	superfamily_P-loop_NTPase,smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Ras,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB27A	HGNC	ENSG00000069974	tier1	rs151048993	-	41	0	0.00	26	7	21.21	75	0	0.00	63	22	25.88
PEG3	0	genome.wustl.edu	37	19	57335828	57335828	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	19	57335828	57335828	T	C	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	missense	c.196	p.K66E	0.993	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300	tier1	-	-	25	0	0.00	28	6	17.65	120	0	0.00	81	9	10.00
BTBD16	0	genome.wustl.edu	37	10	124089035	124089035	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	10	124089035	124089035	C	T	SNP	BTBD16	ENST00000368994	human	ensembl	74_37	+1	known	missense	c.955	p.R319W	0.969	NULL	superfamily_BTB/POZ_fold	-	no_errors	BTBD16	HGNC	ENSG00000138152	tier1	-	-	45	0	0.00	54	7	11.48	72	0	0.00	68	23	25.27
KIAA1109	0	genome.wustl.edu	37	4	123128768	123128768	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	4	123128768	123128768	C	T	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	missense	c.1727	p.T576I	1.000	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688	tier1	-	-	78	0	0.00	87	43	32.82	92	0	0.00	57	22	27.50
XIST	0	genome.wustl.edu	37	X	73040985	73040985	+	R	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	X	73040985	73040985	C	T	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	tier1	-	-	41	0	0.00	16	42	72.41	60	0	0.00	20	32	61.54
C19orf55	0	genome.wustl.edu	37	19	36259390	36259390	+	Silent	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	19	36259390	36259390	G	A	SNP	C19orf55	ENST00000396908	human	ensembl	74_37	+1	known	silent	c.1383	p.R461	0.204	NULL	NULL	-	no_errors	C19orf55	HGNC	ENSG00000167595	tier1	-	-	74	0	0.00	166	24	12.63	62	0	0.00	110	14	11.02
KNDC1	0	genome.wustl.edu	37	10	135013927	135013927	+	Silent	SNP	C	C	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	10	135013927	135013927	C	A	SNP	KNDC1	ENST00000368572	human	ensembl	74_37	+1	known	silent	c.2958	p.R986	0.021	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_Kinase-like_dom,smart_KIND,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	KNDC1	HGNC	ENSG00000171798	tier1	-	-	129	0	0.00	126	27	17.65	3	0	0.00	11	2	15.38
RNF222	0	genome.wustl.edu	37	17	8296735	8296735	+	Silent	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	17	8296735	8296735	G	T	SNP	RNF222	ENST00000344001	human	ensembl	74_37	-1	known	silent	c.45	p.P15	0.935	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF222	HGNC	ENSG00000189051	tier1	-	-	19	0	0.00	17	4	19.05	35	0	0.00	25	8	23.53
CPA5	0	genome.wustl.edu	37	7	130002370	130002370	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	7	130002370	130002370	C	T	SNP	CPA5	ENST00000355388	human	ensembl	74_37	+1	known	missense	c.626	p.T209I	0.029	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA5	HGNC	ENSG00000158525	tier1	-	-	9	0	0.00	4	5	55.56	29	0	0.00	27	9	25.00
CHST1	0	genome.wustl.edu	37	11	45671752	45671752	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	11	45671752	45671752	G	T	SNP	CHST1	ENST00000308064	human	ensembl	74_37	-1	known	missense	c.722	p.A241D	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST1	HGNC	ENSG00000175264	tier1	-	-	48	0	0.00	63	15	19.23	40	0	0.00	53	11	17.19
CLLU1	0	genome.wustl.edu	37	12	92818639	92818639	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	12	92818639	92818639	C	A	SNP	CLLU1	ENST00000378485	human	ensembl	74_37	+1	known	missense	c.183	p.S61R	0.072	NULL	NULL	-	no_errors	CLLU1	HGNC	ENSG00000257127	tier1	-	-	74	0	0.00	66	10	13.16	82	0	0.00	47	9	16.07
MAST2	0	genome.wustl.edu	37	1	46493510	46493510	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	46493510	46493510	A	G	SNP	MAST2	ENST00000361297	human	ensembl	74_37	+1	known	missense	c.2027	p.D676G	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST2	HGNC	ENSG00000086015	tier1	-	-	43	0	0.00	35	25	41.67	122	0	0.00	101	80	44.20
CCDC54	0	genome.wustl.edu	37	3	107096946	107096946	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	3	107096946	107096946	A	G	SNP	CCDC54	ENST00000261058	human	ensembl	74_37	+1	known	missense	c.512	p.Y171C	0.004	NULL	NULL	-	no_errors	CCDC54	HGNC	ENSG00000138483	tier1	-	-	38	0	0.00	16	15	48.39	149	0	0.00	49	49	50.00
SAT2	0	genome.wustl.edu	37	17	7530066	7530066	+	R	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	17	7530066	7530066	C	T	SNP	SAT2	ENST00000570850	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	SAT2	HGNC	ENSG00000141504	tier1	-	-	49	0	0.00	57	7	10.94	119	0	0.00	118	24	16.90
EMR1	0	genome.wustl.edu	37	19	6890543	6890543	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	19	6890543	6890543	C	A	SNP	EMR1	ENST00000312053	human	ensembl	74_37	+1	known	missense	c.83	p.P28Q	0.002	NULL	pfam_GPCR_2_secretin-like,pfam_EGF-like_Ca-bd_dom,pfam_GPS_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_EMR1_rcpt,prints_GPCR_2_secretin-like	-	no_errors	EMR1	HGNC	ENSG00000174837	tier1	-	-	22	0	0.00	35	14	28.57	108	1	0.92	114	46	28.75
FAM151A	0	genome.wustl.edu	37	1	55078384	55078384	+	Splice_Site	SNP	C	C	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	55078384	55078384	C	A	SNP	FAM151A	ENST00000302250	human	ensembl	74_37	-1	known	splice_site	c.576-1	e5-1	1.000	-	-	-	no_errors	FAM151A	HGNC	ENSG00000162391	tier1	-	-	27	0	0.00	30	4	11.76	80	0	0.00	101	15	12.82
NUMA1	0	genome.wustl.edu	37	11	71715046	71715046	+	Missense_Mutation	SNP	T	T	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	11	71715046	71715046	T	G	SNP	NUMA1	ENST00000393695	human	ensembl	74_37	-1	known	missense	c.6223	p.K2075Q	1.000	NULL	superfamily_Prefoldin	-	no_errors	NUMA1	HGNC	ENSG00000137497	tier1	-	-	74	0	0.00	64	19	22.89	46	0	0.00	33	13	28.26
MARK1	0	genome.wustl.edu	37	1	220804450	220804450	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	220804450	220804450	C	T	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	missense	c.983	p.P328L	1.000	pfscan_UBA/transl_elong_EF1B_N_euk	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141	tier1	-	-	66	0	0.00	73	25	25.51	128	0	0.00	93	26	21.85
PRSS22	0	genome.wustl.edu	37	16	2908114	2908114	+	R	SNP	G	G	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	16	2908114	2908114	G	C	SNP	PRSS22	ENST00000574768	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PRSS22	HGNC	ENSG00000005001	tier1	-	-	53	0	0.00	81	11	11.96	8	0	0.00	18	2	10.00
MARCH9	0	genome.wustl.edu	37	12	58152549	58152549	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	12	58152549	58152549	C	T	SNP	MARCH9	ENST00000266643	human	ensembl	74_37	+1	known	missense	c.910	p.R304C	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH9	HGNC	ENSG00000139266	tier1	-	-	20	0	0.00	6	3	33.33	21	0	0.00	22	10	31.25
GRIN3A	0	genome.wustl.edu	37	9	104433255	104433255	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	9	104433255	104433255	C	G	SNP	GRIN3A	ENST00000361820	human	ensembl	74_37	-1	known	missense	c.1439	p.R480P	1.000	superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	-	no_errors	GRIN3A	HGNC	ENSG00000198785	tier1	-	-	36	0	0.00	36	9	20.00	111	0	0.00	99	18	15.38
SIDT1	0	genome.wustl.edu	37	3	113325907	113325907	+	Missense_Mutation	SNP	A	A	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	3	113325907	113325907	A	G	SNP	SIDT1	ENST00000393830	human	ensembl	74_37	+1	known	missense	c.1424	p.N475S	1.000	NULL	NULL	-	no_errors	SIDT1	HGNC	ENSG00000072858	tier1	-	-	42	0	0.00	61	13	17.57	120	0	0.00	129	22	14.57
KCNJ6	0	genome.wustl.edu	37	21	38997772	38997772	+	Missense_Mutation	SNP	C	C	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	21	38997772	38997772	C	A	SNP	KCNJ6	ENST00000288309	human	ensembl	74_37	-1	known	missense	c.961	p.A321S	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.2	-	no_errors	KCNJ6	HGNC	ENSG00000157542	tier1	-	-	26	0	0.00	16	10	35.71	104	0	0.00	66	13	16.46
ANO2	0	genome.wustl.edu	37	12	5744346	5744346	+	Silent	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	12	5744346	5744346	G	A	SNP	ANO2	ENST00000356134	human	ensembl	74_37	-1	known	silent	c.1791	p.G597	0.016	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO2	HGNC	ENSG00000047617	tier1	-	-	49	0	0.00	28	19	40.43	61	0	0.00	16	17	51.52
CALCR	0	genome.wustl.edu	37	7	93072957	93072957	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	7	93072957	93072957	G	T	SNP	CALCR	ENST00000359558	human	ensembl	74_37	-1	known	missense	c.863	p.T288N	0.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GCPR_2_calcitonin_rcpt_fam,prints_GPCR_2_secretin-like,prints_GPCR_2_calcitonin_rcpt	-	no_errors	CALCR	HGNC	ENSG00000004948	tier1	-	-	36	0	0.00	14	13	48.15	101	0	0.00	40	38	48.72
SEMA4D	0	genome.wustl.edu	37	9	92001316	92001316	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	9	92001316	92001316	T	C	SNP	SEMA4D	ENST00000356444	human	ensembl	74_37	-1	known	missense	c.1412	p.E471G	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,pfam_Immunoglobulin,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,smart_Ig_sub2,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4D	HGNC	ENSG00000187764	tier1	-	-	41	0	0.00	32	5	13.51	37	0	0.00	27	4	12.90
EVC2	0	genome.wustl.edu	37	4	5664843	5664843	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	4	5664843	5664843	G	A	SNP	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	missense	c.1136	p.A379V	1.000	pfam_Limbin	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040	tier1	-	-	22	0	0.00	10	15	60.00	87	0	0.00	45	35	43.75
RPS15	0	genome.wustl.edu	37	19	1438503	1438503	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	19	1438503	1438503	G	T	SNP	RPS15	ENST00000592623	human	ensembl	74_37	+1	known	missense	c.79	p.A27S	0.000	NULL	NULL	-	no_errors	RPS15	HGNC	ENSG00000115268	tier1	-	-	51	0	0.00	79	18	18.56	19	0	0.00	25	3	10.71
KIAA1244	0	genome.wustl.edu	37	6	138610965	138610965	+	Missense_Mutation	SNP	A	A	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	6	138610965	138610965	A	T	SNP	KIAA1244	ENST00000251691	human	ensembl	74_37	+1	known	missense	c.2907	p.K969N	1.000	superfamily_ARM-type_fold	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold,superfamily_Sec7_dom,smart_Sec7_dom	-	no_errors	KIAA1244	HGNC	ENSG00000112379	tier1	-	-	63	0	0.00	36	24	40.00	83	0	0.00	25	13	34.21
PIK3CG	0	genome.wustl.edu	37	7	106508826	106508826	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	7	106508826	106508826	G	A	SNP	PIK3CG	ENST00000359195	human	ensembl	74_37	+1	known	missense	c.820	p.V274I	1.000	pfam_PI3K_Ras-bd_dom,smart_PI3K_Ras-bd_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CG	HGNC	ENSG00000105851	tier1	-	-	55	0	0.00	56	11	16.18	83	0	0.00	48	15	23.81
LRRC9	0	genome.wustl.edu	37	14	60468763	60468763	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	14	60468763	60468763	C	T	SNP	LRRC9	ENST00000254271	human	ensembl	74_37	+1	known	missense	c.2609	p.T870M	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC9	HGNC	ENSG00000131951	tier1	-	-	74	0	0.00	50	9	15.25	125	0	0.00	72	17	19.10
ETV3L	0	genome.wustl.edu	37	1	157062565	157062565	+	Missense_Mutation	SNP	T	T	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	157062565	157062565	T	A	SNP	ETV3L	ENST00000454449	human	ensembl	74_37	-1	known	missense	c.962	p.K321M	0.001	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETV3L	HGNC	ENSG00000253831	tier1	-	-	49	0	0.00	71	21	22.83	61	0	0.00	97	20	17.09
TP53	0	genome.wustl.edu	37	17	7577129	7577131	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	AAG	AAG	AAG	-	AAG	AAG	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	17	7577129	7577131	AAG	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	in_frame_del	c.809_807	p.F270in_frame_del	1.000:1.000:1.000	pfam_p53_D-bd,superfamily_p53-like_TF_D-bd,prints_p53_tumour_suppressor	pfam_p53_D-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_D-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1			12	0	0.00	7	7	50.00	112	0	0.00	48	77	61.60
SYDE1	0	genome.wustl.edu	37	19	15224613	15224618	+	In_Frame_Del	DEL	AGCGAG	AGCGAG	-			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	AGCGAG	AGCGAG	AGCGAG	-	AGCGAG	AGCGAG	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	19	15224613	15224618	AGCGAG	-	DEL	SYDE1	ENST00000342784	human	ensembl	74_37	+1	known	in_frame_del	c.2047_2052	p.SE683in_frame_del	1.000:1.000:0.990:1.000:1.000:1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	SYDE1	HGNC	ENSG00000105137	tier1			25	0	0.00	45	11	19.64	25	0	0.00	45	11	19.64
C7orf26	0	genome.wustl.edu	37	7	6629958	6629958	+	Missense_Mutation	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	7	6629958	6629958	G	A	SNP	C7orf26	ENST00000344417	human	ensembl	74_37	+1	known	missense	c.44	p.S15N	1.000	NULL	NULL	-	no_errors	C7orf26	HGNC	ENSG00000146576	tier1	-	-	31	0	0.00	17	11	39.29	9	0	0.00	5	4	44.44
SLC25A47	0	genome.wustl.edu	37	14	100795157	100795157	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	14	100795157	100795157	C	T	SNP	SLC25A47	ENST00000361529	human	ensembl	74_37	+1	known	missense	c.422	p.P141L	0.006	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A47	HGNC	ENSG00000140107	tier1	-	-	40	0	0.00	28	26	48.15	6	0	0.00	2	5	71.43
TBC1D1	0	genome.wustl.edu	37	4	38016303	38016303	+	Silent	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	4	38016303	38016303	C	T	SNP	TBC1D1	ENST00000261439	human	ensembl	74_37	+1	known	silent	c.591	p.I197	0.996	smart_PTB/PI_dom	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D1	HGNC	ENSG00000065882	tier1	-	-	26	0	0.00	32	8	19.51	23	0	0.00	8	3	27.27
ENSG00000258364	0	genome.wustl.edu	37	14	19412591	19412591	+	R	SNP	A	A	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	14	19412591	19412591	A	T	SNP	ENSG00000258364	ENST00000550928	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	RP11-536C10.16	Clone_based_vega_gene	ENSG00000258364	tier1	-	-	53	0	0.00	68	11	13.75	67	0	0.00	88	5	5.38
MUC1	0	genome.wustl.edu	37	1	155158531	155158531	+	R	SNP	T	T	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	155158531	155158531	T	C	SNP	MUC1	ENST00000462215	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MUC1	HGNC	ENSG00000185499	tier1	-	-	51	0	0.00	93	11	10.48	27	0	0.00	62	6	8.70
FCER2	0	genome.wustl.edu	37	19	7761923	7761923	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	19	7761923	7761923	C	G	SNP	FCER2	ENST00000346664	human	ensembl	74_37	-1	known	missense	c.355	p.D119H	0.057	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	FCER2	HGNC	ENSG00000104921	tier1	-	-	62	0	0.00	98	10	9.26	48	0	0.00	95	4	4.00
ZNF225	0	genome.wustl.edu	37	19	44636550	44636550	+	Missense_Mutation	SNP	C	C	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	19	44636550	44636550	C	G	SNP	ZNF225	ENST00000262894	human	ensembl	74_37	+1	known	missense	c.1783	p.P595A	0.999	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF225	HGNC	ENSG00000256294	tier1	-	-	54	0	0.00	155	15	8.82	62	0	0.00	114	10	8.06
MYH10	0	genome.wustl.edu	37	17	8380278	8380278	+	Missense_Mutation	SNP	C	C	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	17	8380278	8380278	C	T	SNP	MYH10	ENST00000396239	human	ensembl	74_37	-1	known	missense	c.5765	p.R1922H	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_HR1_rho-bd,superfamily_UBA-like,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH10	HGNC	ENSG00000133026	tier1	-	-	26	0	0.00	39	10	20.00	55	0	0.00	65	7	9.72
OSTN	0	genome.wustl.edu	37	3	190967857	190967857	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	3	190967857	190967857	G	T	SNP	OSTN	ENST00000339051	human	ensembl	74_37	+1	known	missense	c.349	p.G117C	0.993	pfam_Osteocrin	pfam_Osteocrin	-	no_errors	OSTN	HGNC	ENSG00000188729	tier1	-	-	133	0	0.00	74	64	46.38	184	2	1.08	85	53	38.41
CDK5RAP2	0	genome.wustl.edu	37	9	123205989	123205989	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	9	123205989	123205989	G	T	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	missense	c.3057	p.D1019E	0.717	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861	tier1	-	-	29	0	0.00	26	10	27.78	47	1	2.08	35	15	30.00
KRTAP10-10	0	genome.wustl.edu	37	21	46057634	46057634	+	Silent	SNP	T	T	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	21	46057634	46057634	T	C	SNP	KRTAP10-10	ENST00000380095	human	ensembl	74_37	+1	known	silent	c.300	p.C100	0.122	NULL	NULL	-	no_errors	KRTAP10-10	HGNC	ENSG00000221859	tier1	rs61029972	-	34	0	0.00	31	7	18.42	9	0	0.00	9	0	0.00
SLC4A5	0	genome.wustl.edu	37	2	74479414	74479416	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	2	74479414	74479416	CCA	-	DEL	SLC4A5	ENST00000357822	human	ensembl	74_37	-1	known	in_frame_del	c.1370_1368	p.G457in_frame_del	0.160:0.293:0.421	tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A5	HGNC	ENSG00000188687	tier1			29	0	0.00	15	2	11.76	5	0	0.00	9	0	0.00
ANKRD20A8P	0	genome.wustl.edu	37	2	95494939	95494939	+	R	SNP	A	A	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	2	95494939	95494939	A	T	SNP	ANKRD20A8P	ENST00000432432	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.278	-	-	-	no_errors	ANKRD20A8P	HGNC	ENSG00000229089	tier1	-	-	318	0	0.00	290	65	18.31	0	0	0.00	0	0	0.00
DNM1P47	0	genome.wustl.edu	37	15	102304789	102304791	+	R	DEL	GAA	GAA	-			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	15	102304789	102304791	GAA	-	DEL	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.066:0.054:0.028	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1			37	0	0.00	35	6	14.63	0	0	0.00	0	0	0.00
GS	0	genome.wustl.edu	37	20	57464277	57464278	+	R	INS	-	-	CGGCG			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	20	57464277	57464278	-	CGGCG	INS	GS	ENST00000469431	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.949:0.921	-	-	-	no_errors	GS	HGNC	ENSG00000087460	tier1			0	0	0.00	0	0	0.00	0	0	0.00	0	0	0.00
GOLGA6L1	0	genome.wustl.edu	37	15	22743302	22743303	+	In_Frame_Ins	INS	-	-	AGG			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	15	22743302	22743303	-	AGG	INS	GOLGA6L1	ENST00000316397	human	ensembl	74_37	+1	known	in_frame_ins	c.1687_1688	p.565in_frame_insE	0.243:0.437	NULL	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	GOLGA6L1	HGNC	ENSG00000197414	tier1			53	0	0.00	54	5	8.47	2	0	0.00	0	0	0.00
GOLGA8M	0	genome.wustl.edu	37	15	28952905	28952905	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	15	28952905	28952905	T	C	SNP	GOLGA8M	ENST00000340249	human	ensembl	74_37	-1	known	missense	c.337	p.K113E	0.783	NULL	NULL	-	no_errors	GOLGA8M	HGNC	ENSG00000188626	tier1	-	-	131	0	0.00	98	32	24.62	0	0	0.00	0	0	0.00
MT-RNR2	0	genome.wustl.edu	37	MT	2647	2647	+	R	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	MT	2647	2647	G	T	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082	tier1	-	-	670	0	0.00	237	357	60.10	4	0	0.00	0	1	100.00
MT-TC	0	genome.wustl.edu	37	MT	5824	5824	+	R	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	MT	5824	5824	G	A	SNP	MT-TC	ENST00000387405	human	ensembl	74_37	-1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TC	HGNC	ENSG00000210140	tier1	-	-	112	0	0.00	89	22	19.82	0	0	0.00	2	0	0.00
MT-TF	0	genome.wustl.edu	37	MT	588	588	+	R	SNP	T	T	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	MT	588	588	T	C	SNP	MT-TF	ENST00000387314	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TF	HGNC	ENSG00000210049	tier1	-	-	98	0	0.00	41	63	60.58	0	0	0.00	0	1	100.00
PCDH8	0	genome.wustl.edu	37	13	53421442	53421444	+	In_Frame_Del	DEL	GCG	GCG	-			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	GCG	GCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	13	53421442	53421444	GCG	-	DEL	PCDH8	ENST00000377942	human	ensembl	74_37	-1	known	in_frame_del	c.1130_1128	p.A378in_frame_del	0.903:0.923:0.916	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH8	HGNC	ENSG00000136099	tier1			8	0	0.00	6	3	33.33	0	0	0.00	0	0	0.00
PDXK	0	genome.wustl.edu	37	21	45157549	45157590	+	R	DEL	GGGCCAGGAGCCTGCCGACGGACACCAGCGAGGGGCCAGGCC	GGGCCAGGAGCCTGCCGACGGACACCAGCGAGGGGCCAGGCC	-			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	GGGCCAGGAGCCTGCCGACGGACACCAGCGAGGGGCCAGGCC	GGGCCAGGAGCCTGCCGACGGACACCAGCGAGGGGCCAGGCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	21	45157549	45157590	GGGCCAGGAGCCTGCCGACGGACACCAGCGAGGGGCCAGGCC	-	DEL	PDXK	ENST00000476313	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.002:0.001:0.000:0.000:0.000:0.001:0.000:0.000:0.000:0.001:0.001:0.001:0.000:0.000:0.000:0.000:0.001:0.000:0.001:0.002:0.001:0.001:0.001:0.000:0.000:0.000:0.000:0.000:0.001:0.002:0.003:0.003:0.004:0.003:0.003:0.001:0.000:0.001:0.000:0.000:0.000	-	-	-	no_errors	PDXK	HGNC	ENSG00000160209	tier1			1	0	0.00	2	0	0.00	1	0	0.00	2	0	0.00
MT-RNR1	0	genome.wustl.edu	37	MT	686	686	+	R	SNP	A	A	G			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	MT	686	686	A	G	SNP	MT-RNR1	ENST00000389680	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR1	HGNC	ENSG00000211459	tier1	-	-	188	0	0.00	63	98	60.87	2	0	0.00	2	2	50.00
SGK223	0	genome.wustl.edu	37	8	8234306	8234306	+	Missense_Mutation	SNP	T	T	C			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	8	8234306	8234306	T	C	SNP	SGK223	ENST00000330777	human	ensembl	74_37	-1	known	missense	c.1613	p.E538G	0.003	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	SGK223	Uniprot_gn	ENSG00000182319	tier1	-	-	53	0	0.00	39	22	36.07	34	0	0.00	24	2	7.69
USH2A	0	genome.wustl.edu	37	1	215848049	215848049	+	Missense_Mutation	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	1	215848049	215848049	G	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.13204	p.Q4402K	0.516	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	16	0	0.00	20	9	31.03	58	0	0.00	60	2	3.23
CLPSL1	0	genome.wustl.edu	37	6	35754852	35754852	+	Silent	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	6	35754852	35754852	G	T	SNP	CLPSL1	ENST00000373861	human	ensembl	74_37	+1	known	silent	c.177	p.S59	0.001	smart_Colipase,prints_Colipase	smart_Colipase,prints_Colipase	-	no_errors	CLPSL1	HGNC	ENSG00000204140	tier1	-	-	214	1	0.47	239	27	10.11	28	0	0.00	34	2	5.56
UVSSA	0	genome.wustl.edu	37	4	1360147	1360147	+	Nonsense_Mutation	SNP	G	G	T			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	4	1360147	1360147	G	T	SNP	UVSSA	ENST00000389851	human	ensembl	74_37	+1	known	nonsense	c.1216	p.E406*	0.674	NULL	pfam_DUF2043,superfamily_ENTH_VHS	-	no_errors	UVSSA	HGNC	ENSG00000163945	tier1	-	-	42	0	0.00	35	4	10.26	69	0	0.00	71	2	2.74
STRN	0	genome.wustl.edu	37	2	37126759	37126759	+	Silent	SNP	G	G	A			TCGA-DX-A8BL-01A-11D-A417-09	TCGA-DX-A8BL-10A-01D-A41A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7e48209f-ba06-4da0-b1d5-3e7bb00d5cba	13d21ee5-7825-41f8-a9b2-9d73657bf6c9	2	37126759	37126759	G	A	SNP	STRN	ENST00000263918	human	ensembl	74_37	-1	known	silent	c.702	p.F234	1.000	NULL	pfam_Striatin_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	STRN	HGNC	ENSG00000115808	tier1	-	-	48	0	0.00	60	10	14.29	70	0	0.00	62	3	4.62
