Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
ANKRD36	375248	broad.mit.edu	37	2	97808552	97808552	+	Missense_Mutation	SNP	A	A	G			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr2:97808552A>G	ENST00000420699.2	+	8	1125	c.881A>G	c.(880-882)gAt>gGt	p.D294G	ANKRD36_ENST00000461153.2_Missense_Mutation_p.D294G	NM_001164315.1	NP_001157787.1	A6QL64	AN36A_HUMAN	ankyrin repeat domain 36	294										endometrium(9)|kidney(5)|liver(1)|lung(3)|ovary(2)|prostate(2)|upper_aerodigestive_tract(1)	23						GAAATAAAGGATGGACAAAAA	0.353000													4	6					0	0	1	0	0
SERPINB11	89778	broad.mit.edu	37	18	61379924	61379924	+	RNA	SNP	T	T	A			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr18:61379924T>A	ENST00000544088.1	+	0	416				SERPINB11_ENST00000382749.5_RNA|SERPINB11_ENST00000536691.1_RNA|SERPINB11_ENST00000538847.1_RNA|SERPINB11_ENST00000489748.1_RNA	NM_080475.2	NP_536723.2	Q96P15	SPB11_HUMAN	serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)						regulation of proteolysis	cytoplasm	serine-type endopeptidase inhibitor activity			breast(1)|cervix(1)|kidney(1)|lung(3)	6		Esophageal squamous(42;0.129)				TGGCATTTCATCAGGTAAGTC	0.438000													34	46					0	0	1	0	0
ANKRD36	375248	broad.mit.edu	37	2	97867960	97867960	+	Missense_Mutation	SNP	C	C	G			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr2:97867960C>G	ENST00000420699.2	+	47	3123	c.2879C>G	c.(2878-2880)gCc>gGc	p.A960G	ANKRD36_ENST00000461153.2_Missense_Mutation_p.A960G	NM_001164315.1	NP_001157787.1	A6QL64	AN36A_HUMAN	ankyrin repeat domain 36	960										endometrium(9)|kidney(5)|liver(1)|lung(3)|ovary(2)|prostate(2)|upper_aerodigestive_tract(1)	23						AAACCACCAGCCTTGAAGGTA	0.338000													3	37					0	0	1	0	0
CCDC97	90324	broad.mit.edu	37	19	41822618	41822618	+	Missense_Mutation	SNP	G	G	A			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr19:41822618G>A	ENST00000269967.3	+	2	498	c.376G>A	c.(376-378)Gtg>Atg	p.V126M		NM_052848.1	NP_443080.1	Q96F63	CCD97_HUMAN	coiled-coil domain containing 97	126										biliary_tract(1)|central_nervous_system(2)|endometrium(3)|kidney(1)|large_intestine(4)|lung(6)	17						CTTTGGCCACGTGCGTGGCGA	0.677000													5	37					0	0	1	0	0
NLRP7	199713	broad.mit.edu	37	19	55449556	55449556	+	Missense_Mutation	SNP	C	C	T			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr19:55449556C>T	ENST00000588756.1	-	7	2471	c.1985G>A	c.(1984-1986)cGc>cAc	p.R662H	NLRP7_ENST00000590030.1_Missense_Mutation_p.R662H|NLRP7_ENST00000592784.1_Missense_Mutation_p.R662H|NLRP7_ENST00000446217.1_Missense_Mutation_p.R690H|NLRP7_ENST00000340844.2_Missense_Mutation_p.R662H|NLRP7_ENST00000328092.5_Intron|NLRP7_ENST00000448121.2_Intron			Q8WX94	NALP7_HUMAN	NLR family, pyrin domain containing 7	662							ATP binding			autonomic_ganglia(1)|breast(2)|central_nervous_system(2)|cervix(1)|endometrium(4)|kidney(3)|large_intestine(17)|liver(1)|lung(33)|prostate(2)|skin(2)|upper_aerodigestive_tract(2)|urinary_tract(3)	73				GBM - Glioblastoma multiforme(193;0.0325)		TGTCCAGAGGCGAAGAGAGCG	0.493000													4	111					0	0	1	0	0
CTNNA3	29119	broad.mit.edu	37	10	69366808	69366808	+	Splice_Site	SNP	C	C	A			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr10:69366808C>A	ENST00000433211.1	-	3	274		c.e3-1		CTNNA3_ENST00000373744.4_Splice_Site|CTNNA3_ENST00000545309.1_Splice_Site	NM_013266.2	NP_037398.2	Q9UI47	CTNA3_HUMAN	catenin (cadherin-associated protein), alpha 3						cell-cell adhesion	actin cytoskeleton|cytoplasm|fascia adherens	cadherin binding|structural molecule activity			breast(1)|central_nervous_system(1)|cervix(2)|endometrium(6)|haematopoietic_and_lymphoid_tissue(1)|kidney(4)|large_intestine(14)|liver(1)|lung(50)|ovary(2)|pancreas(2)|prostate(2)|skin(7)|stomach(1)|urinary_tract(1)	95						GTGTGGTAACCTAAAATTGGA	0.408000													18	31					6.94344e-10	8.24534e-10	1	1	0
AIM1	202	broad.mit.edu	37	6	107011755	107011755	+	Silent	SNP	C	C	A			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr6:107011755C>A	ENST00000369066.3	+	19	5518	c.5031C>A	c.(5029-5031)ggC>ggA	p.G1677G	AIM1_ENST00000535438.1_Silent_p.G496G	NM_001624.2	NP_001615.1	Q9Y4K1	AIM1_HUMAN	absent in melanoma 1	1677	Ricin B-type lectin.						sugar binding			breast(8)|central_nervous_system(1)|cervix(2)|endometrium(6)|kidney(7)|large_intestine(13)|lung(20)|ovary(5)|prostate(2)|skin(2)|stomach(1)|upper_aerodigestive_tract(2)	69	Breast(9;0.0138)|all_epithelial(6;0.169)	all_cancers(87;4.67e-25)|all_epithelial(87;5.46e-21)|Acute lymphoblastic leukemia(125;2.15e-07)|all_hematologic(75;5.28e-06)|Colorectal(196;3.46e-05)|all_lung(197;5.94e-05)|Lung NSC(302;7.26e-05)|Ovarian(999;0.00473)	Epithelial(6;0.00114)|all cancers(7;0.00726)|BRCA - Breast invasive adenocarcinoma(8;0.0114)|OV - Ovarian serous cystadenocarcinoma(5;0.0305)	all cancers(137;1.73e-50)|Epithelial(106;2.42e-48)|OV - Ovarian serous cystadenocarcinoma(136;1.51e-27)|BRCA - Breast invasive adenocarcinoma(108;0.00104)|GBM - Glioblastoma multiforme(226;0.00858)		AGTCCGATGGCAGGATTTACA	0.443000													4	84					1	1	1	1	0
KMT2D	8085	broad.mit.edu	37	12	49427459	49427459	+	Silent	SNP	G	G	A			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr12:49427459G>A	ENST00000301067.7	-	39	11028	c.11029C>T	c.(11029-11031)Ctg>Ttg	p.L3677L		NM_003482.3	NP_003473.3			lysine (K)-specific methyltransferase 2D																		TGTTGGGCCAGAGCTGTATTA	0.637000													30	62					0	0	1	0	0
IQCG	84223	broad.mit.edu	37	3	197616452	197616452	+	Nonstop_Mutation	SNP	C	C	G			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr3:197616452C>G	ENST00000265239.6	-	12	1755	c.1331G>C	c.(1330-1332)tGa>tCa	p.*444S	IQCG_ENST00000455191.1_Nonstop_Mutation_p.*444S	NM_032263.3	NP_115639.1	Q9H095	IQCG_HUMAN	IQ motif containing G	0										autonomic_ganglia(1)|breast(2)|cervix(1)|kidney(1)|large_intestine(3)|lung(10)|skin(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	21	all_cancers(143;1.15e-09)|Ovarian(172;0.0418)|Breast(254;0.0976)		Epithelial(36;7.19e-24)|all cancers(36;3.34e-22)|OV - Ovarian serous cystadenocarcinoma(49;1.1e-18)|LUSC - Lung squamous cell carcinoma(58;6.94e-07)|Lung(62;9.92e-07)	GBM - Glioblastoma multiforme(93;0.149)		AGAACTTGGTCACTTCTTCTT	0.423000													13	121					0	0	1	0	0
AIMP1	9255	broad.mit.edu	37	4	107258085	107258085	+	Silent	SNP	A	A	G			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr4:107258085A>G	ENST00000394701.4	+	6	776	c.735A>G	c.(733-735)gtA>gtG	p.V245V	AIMP1_ENST00000358008.3_Silent_p.V221V|AIMP1_ENST00000442366.1_Silent_p.V221V	NM_001142416.1	NP_001135888.1	Q12904	AIMP1_HUMAN	aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	221	tRNA-binding.				angiogenesis|apoptosis|cell adhesion|cell-cell signaling|chemotaxis|glucose metabolic process|inflammatory response|leukocyte migration|negative regulation of endothelial cell proliferation|signal transduction|tRNA aminoacylation for protein translation	aminoacyl-tRNA synthetase multienzyme complex|cytosol|endoplasmic reticulum|extracellular space|Golgi apparatus|nucleus|transport vesicle	cell surface binding|cytokine activity|protein homodimerization activity|tRNA binding			breast(1)|endometrium(2)|kidney(1)|lung(5)|skin(1)|urinary_tract(1)	11						TGAGGGGAGTATTATCTCAAG	0.388000													4	113					0	0	1	0	0
KRTAP4-12	83755	broad.mit.edu	37	17	39280324	39280324	+	Silent	SNP	C	C	A			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr17:39280324C>A	ENST00000394014.1	-	1	95	c.51G>T	c.(49-51)ctG>ctT	p.L17L		NM_031854.2	NP_114060.1	Q9BQ66	KR412_HUMAN	keratin associated protein 4-12	17	31 X 5 AA repeats of C-C-[GRQVIL]-[SPTR]- [VSTQPC].					keratin filament				endometrium(3)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(5)|lung(1)|prostate(1)|upper_aerodigestive_tract(1)	13		Breast(137;0.000496)	STAD - Stomach adenocarcinoma(17;0.000371)			AGCAGTTCTCCAGGCCACAGC	0.637000													4	141					1	1	1	1	0
LRP1B	53353	broad.mit.edu	37	2	141773335	141773335	+	Missense_Mutation	SNP	T	T	C			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr2:141773335T>C	ENST00000389484.3	-	13	3091	c.2120A>G	c.(2119-2121)aAc>aGc	p.N707S		NM_018557.2	NP_061027.2	Q9NZR2	LRP1B_HUMAN	low density lipoprotein receptor-related protein 1B	707					protein transport|receptor-mediated endocytosis	integral to membrane	calcium ion binding			NS(5)|autonomic_ganglia(1)|biliary_tract(1)|breast(3)|central_nervous_system(7)|endometrium(25)|haematopoietic_and_lymphoid_tissue(10)|kidney(27)|large_intestine(98)|liver(4)|lung(337)|ovary(15)|pancreas(6)|prostate(11)|skin(30)|stomach(2)|upper_aerodigestive_tract(19)|urinary_tract(5)	606		all_cancers(3;1.1e-60)|all_epithelial(3;1.94e-59)|all_lung(3;1.09e-24)|Lung NSC(3;5.65e-24)|Esophageal squamous(3;5.41e-13)|Renal(3;0.000147)|Breast(3;0.000527)|Hepatocellular(3;0.011)|all_neural(3;0.014)|Colorectal(150;0.101)		UCEC - Uterine corpus endometrioid carcinoma (2;0.00139)|Epithelial(1;1.25e-24)|all cancers(1;8.86e-24)|OV - Ovarian serous cystadenocarcinoma(1;2.45e-12)|LUSC - Lung squamous cell carcinoma(1;2.97e-10)|Lung(1;6.05e-09)|BRCA - Breast invasive adenocarcinoma(221;0.0103)		GTATAATGTGTTGGTGTGAAA	0.408000										TSP Lung(27;0.18)			6	61					0	0	1	0	0
CTBP2	1488	broad.mit.edu	37	10	126683040	126683040	+	Missense_Mutation	SNP	G	G	T			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr10:126683040G>T	ENST00000309035.6	-	5	2528	c.2398C>A	c.(2398-2400)Cag>Aag	p.Q800K	CTBP2_ENST00000494626.2_Missense_Mutation_p.Q260K|CTBP2_ENST00000531469.1_Missense_Mutation_p.Q260K|CTBP2_ENST00000411419.2_Missense_Mutation_p.Q260K|CTBP2_ENST00000337195.5_Missense_Mutation_p.Q260K|CTBP2_ENST00000334808.6_Missense_Mutation_p.Q328K	NM_022802.2	NP_073713.2	P56545	CTBP2_HUMAN	C-terminal binding protein 2	260					negative regulation of cell proliferation|negative regulation of transcription, DNA-dependent|transcription, DNA-dependent|viral genome replication|white fat cell differentiation	cell junction|synapse|transcriptional repressor complex	NAD binding|oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor|protein binding			breast(1)|central_nervous_system(2)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(5)|lung(7)|ovary(1)|pancreas(1)|prostate(1)|skin(1)|upper_aerodigestive_tract(1)	25		all_lung(145;0.0132)|Lung NSC(174;0.0193)|all_neural(114;0.116)|Colorectal(57;0.173)		Colorectal(40;0.00572)|COAD - Colon adenocarcinoma(40;0.0127)|GBM - Glioblastoma multiforme(135;0.147)		CAAATTACCTGCTTTATGGTA	0.488000													3	31					0.115264	0.125144	1	1	0
CORO7	79585	broad.mit.edu	37	16	4462417	4462417	+	Translation_Start_Site	SNP	C	C	T			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr16:4462417C>T	ENST00000539968.1	-	0	294				CORO7_ENST00000577144.1_5'UTR|CORO7_ENST00000574025.1_Missense_Mutation_p.V58M|CORO7_ENST00000423908.2_Intron|CORO7_ENST00000537233.2_Missense_Mutation_p.V58M|CORO7-PAM16_ENST00000572467.1_Missense_Mutation_p.V58M|CORO7_ENST00000251166.4_Missense_Mutation_p.V58M					coronin 7											breast(3)|central_nervous_system(1)|cervix(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(1)|lung(8)|prostate(2)|skin(2)|urinary_tract(2)	23						TGCAGAGGCACAATGCCCAGT	0.587000													5	91					0	0	1	0	0
ESR1	2099	broad.mit.edu	37	6	152415668	152415668	+	Silent	SNP	G	G	A			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr6:152415668G>A	ENST00000440973.1	+	9	1888	c.1518G>A	c.(1516-1518)caG>caA	p.Q506Q	ESR1_ENST00000206249.3_Silent_p.Q506Q|ESR1_ENST00000443427.1_Silent_p.Q506Q|ESR1_ENST00000544394.1_Intron|ESR1_ENST00000406599.1_Silent_p.Q245Q|ESR1_ENST00000338799.5_Silent_p.Q506Q|ESR1_ENST00000456483.2_Silent_p.Q394Q	NM_001122742.1	NP_001116214.1	P03372	ESR1_HUMAN	estrogen receptor 1	506	Interaction with AKAP13.|Steroid-binding.				positive regulation of retinoic acid receptor signaling pathway|regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor|response to estradiol stimulus	chromatin remodeling complex|cytoplasm|nucleoplasm	beta-catenin binding|enzyme binding|estrogen receptor activity|estrogen response element binding|nitric-oxide synthase regulator activity|sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity|steroid binding|zinc ion binding			NS(1)|breast(1)|central_nervous_system(2)|cervix(1)|endometrium(9)|kidney(1)|large_intestine(11)|lung(19)|ovary(1)|prostate(2)|skin(1)	49		Ovarian(120;0.0448)	BRCA - Breast invasive adenocarcinoma(37;0.0841)	OV - Ovarian serous cystadenocarcinoma(155;4.55e-10)	Chlorotrianisene(DB00269)|Clomifene(DB00882)|Conjugated Estrogens(DB00286)|Danazol(DB01406)|Desogestrel(DB00304)|Dienestrol(DB00890)|Diethylstilbestrol(DB00255)|Dromostanolone(DB00858)|Drospirenone(DB01395)|Estradiol(DB00783)|Estramustine(DB01196)|Estriol(DB04573)|Estrone(DB00655)|Ethinyl Estradiol(DB00977)|Ethynodiol Diacetate(DB00823)|Etonogestrel(DB00294)|Fluoxymesterone(DB01185)|Fulvestrant(DB00947)|Letrozole(DB01006)|Levonorgestrel(DB00367)|Medroxyprogesterone(DB00603)|Megestrol(DB00351)|Melatonin(DB01065)|Mestranol(DB01357)|Naloxone(DB01183)|Norgestimate(DB00957)|Norgestrel(DB00506)|Progesterone(DB00396)|Quinestrol(DB04575)|Raloxifene(DB00481)|Tamoxifen(DB00675)|Toremifene(DB00539)	GGCTGGCCCAGCTCCTCCTCA	0.562000													10	39					0	0	1	0	0
NUDT17	200035	broad.mit.edu	37	1	145586928	145586928	+	Missense_Mutation	SNP	C	C	T			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr1:145586928C>T	ENST00000334513.5	-	7	771	c.760G>A	c.(760-762)Gcc>Acc	p.A254T		NM_001012758.2	NP_001012776.1	P0C025	NUD17_HUMAN	nudix (nucleoside diphosphate linked moiety X)-type motif 17	254							hydrolase activity|metal ion binding			endometrium(3)|large_intestine(1)|lung(2)|skin(1)|urinary_tract(2)	9	all_hematologic(18;0.0187)|Acute lymphoblastic leukemia(18;0.0786)					AGAGGTCGGGCTCTTCCATCC	0.527000													45	81					0	0	1	0	0
PPT2-EGFL8	0	broad.mit.edu	37	6	32122382	32122382	+	Missense_Mutation	SNP	T	T	G			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr6:32122382T>G	ENST00000422437.1	+	2	202	c.11T>G	c.(10-12)cTc>cGc	p.L4R	PPT2_ENST00000493548.1_3'UTR|PPT2_ENST00000361568.2_Missense_Mutation_p.L10R|PPT2_ENST00000324816.6_Missense_Mutation_p.L4R|PPT2_ENST00000375137.2_Missense_Mutation_p.L4R|PPT2_ENST00000395523.1_Missense_Mutation_p.L4R|PPT2_ENST00000375143.2_Missense_Mutation_p.L4R|PPT2-EGFL8_ENST00000453656.2_3'UTR|PPT2_ENST00000445576.2_Missense_Mutation_p.L4R|PPT2_ENST00000437001.2_5'UTR																							ATGCTGGGGCTCTGCGGGCAG	0.677000													89	153					0	0	1	0	0
CELSR3	1951	broad.mit.edu	37	3	48697526	48697526	+	Missense_Mutation	SNP	T	T	A			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr3:48697526T>A	ENST00000544264.1	-	1	2822	c.2542A>T	c.(2542-2544)Atc>Ttc	p.I848F	CELSR3_ENST00000164024.4_Missense_Mutation_p.I848F			Q9NYQ7	CELR3_HUMAN	cadherin, EGF LAG seven-pass G-type receptor 3	848	Cadherin 5.				homophilic cell adhesion|multicellular organismal development|neuropeptide signaling pathway	integral to membrane|plasma membrane	calcium ion binding|G-protein coupled receptor activity|protein binding			NS(1)|biliary_tract(1)|breast(2)|central_nervous_system(3)|cervix(1)|endometrium(10)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(7)|lung(23)|ovary(9)|prostate(6)|skin(7)|stomach(1)|upper_aerodigestive_tract(3)|urinary_tract(5)	83				BRCA - Breast invasive adenocarcinoma(193;0.000292)|KIRC - Kidney renal clear cell carcinoma(197;0.00549)|Kidney(197;0.00619)		GCATCTGTGATGTTGATGTGC	0.507000													6	114					0	0	1	0	0
KAT6A	7994	broad.mit.edu	37	8	41792173	41792173	+	Missense_Mutation	SNP	T	T	A			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr8:41792173T>A	ENST00000396930.3	-	18	4108	c.3565A>T	c.(3565-3567)Att>Ttt	p.I1189F	KAT6A_ENST00000265713.2_Missense_Mutation_p.I1189F|KAT6A_ENST00000406337.1_Missense_Mutation_p.I1189F	NM_001099412.1	NP_001092882.1	Q92794	MYST3_HUMAN	K(lysine) acetyltransferase 6A	1189					histone H3 acetylation|myeloid cell differentiation|negative regulation of transcription, DNA-dependent|nucleosome assembly|positive regulation of transcription, DNA-dependent|transcription, DNA-dependent	MOZ/MORF histone acetyltransferase complex|nucleosome	DNA binding|histone acetyltransferase activity|transcription coactivator activity|transcription factor binding|zinc ion binding										ATGGGCTCAATGACGCATGCT	0.478000													34	76					0	0	1	0	0
BPIFA1	51297	broad.mit.edu	37	20	31825610	31825610	+	Silent	SNP	C	C	A			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr20:31825610C>A	ENST00000354297.4	+	2	164	c.93C>A	c.(91-93)acC>acA	p.T31T	BPIFA1_ENST00000375422.2_Silent_p.T31T|BPIFA1_ENST00000375413.4_Silent_p.T31T	NM_130852.2	NP_570913.1	Q9NP55	PLUNC_HUMAN	BPI fold containing family A, member 1	31					innate immune response	extracellular region	lipid binding										TGGACCAGACCCTGCCCTTGA	0.557000													4	78					0.00909568	0.0101658	1	1	0
DNAH17	8632	broad.mit.edu	37	17	76457692	76457692	+	Silent	SNP	G	G	C			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr17:76457692G>C	ENST00000389840.5	-	58	9355	c.9231C>G	c.(9229-9231)gcC>gcG	p.A3077A	DNAH17_ENST00000586052.1_5'UTR|DNAH17_ENST00000585328.1_Silent_p.A3086A					dynein, axonemal, heavy chain 17											NS(2)|breast(7)|central_nervous_system(5)|cervix(1)|endometrium(15)|haematopoietic_and_lymphoid_tissue(1)|kidney(13)|large_intestine(8)|lung(37)|ovary(8)|prostate(7)|skin(4)|stomach(2)|upper_aerodigestive_tract(3)|urinary_tract(3)	116			BRCA - Breast invasive adenocarcinoma(99;0.00294)|OV - Ovarian serous cystadenocarcinoma(97;0.0656)			TGACCTTCTCGGCCTCGATGC	0.537000													7	11					0	0	1	0	0
TXNDC2	0	broad.mit.edu	37	18	9886894	9886894	+	Missense_Mutation	SNP	A	A	G	rs146821851		TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr18:9886894A>G	ENST00000306084.6	+	2	617	c.418A>G	c.(418-420)Aaa>Gaa	p.K140E	TXNDC2_ENST00000426718.3_3'UTR|TXNDC2_ENST00000357775.4_Missense_Mutation_p.K73E|TXNDC2_ENST00000584255.1_3'UTR|TXNDC2_ENST00000536353.2_Missense_Mutation_p.K73E	NM_001098529.1	NP_001091999.1	Q86VQ3	TXND2_HUMAN	thioredoxin domain containing 2 (spermatozoa)	140	22 X 15 AA approximate tandem repeat of Q-P-K-X-G-D-I-P-K-S-[PS]-E-[KE]-X-I.				cell differentiation|cell redox homeostasis|glycerol ether metabolic process|multicellular organismal development|spermatogenesis	cytoplasm	electron carrier activity|nutrient reservoir activity|protein disulfide oxidoreductase activity|thioredoxin-disulfide reductase activity	p.K140E(2)|p.K73E(2)		NS(1)|central_nervous_system(1)|cervix(1)|endometrium(2)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(4)|lung(9)|ovary(2)|pancreas(1)|skin(7)|urinary_tract(1)	31						GTCCTCAGAAAAAGCCATCCA	0.547000													4	155					0	0	1	0	0
EXD3	54932	broad.mit.edu	37	9	140247218	140247218	+	Silent	SNP	C	C	A			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr9:140247218C>A	ENST00000340951.4	-	11	1086	c.891G>T	c.(889-891)ccG>ccT	p.P297P	EXD3_ENST00000342129.4_5'UTR	NM_017820.3	NP_060290.3	Q8N9H8	MUT7_HUMAN	exonuclease 3'-5' domain containing 3	297					nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	intracellular	3'-5' exonuclease activity|nucleic acid binding			NS(1)|central_nervous_system(1)|endometrium(1)|kidney(1)|large_intestine(1)|lung(5)|prostate(2)	12						CCTGAAGCCACGGGCTCTGCC	0.677000													4	5					1	1	1	1	0
DMC1	11144	broad.mit.edu	37	22	38945974	38945974	+	Silent	SNP	G	G	T			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr22:38945974G>T	ENST00000216024.2	-	8	726	c.450C>A	c.(448-450)ggC>ggA	p.G150G	DMC1_ENST00000428462.2_Intron	NM_007068.2	NP_008999.2	Q14565	DMC1_HUMAN	DNA meiotic recombinase 1	150			G -> D (in dbSNP:rs58396845).		reciprocal meiotic recombination	condensed nuclear chromosome	ATP binding|DNA binding|DNA-dependent ATPase activity|protein binding			large_intestine(5)|lung(4)|ovary(1)|upper_aerodigestive_tract(1)	11	Melanoma(58;0.0286)					CTCCTGGGTAGCCACCAGCTC	0.318000								Homologous recombination					8	13					1.76689e-08	2.0346e-08	1	1	0
ANKRD36	375248	broad.mit.edu	37	2	97867947	97867947	+	Missense_Mutation	SNP	C	C	G	rs10203570	by1000genomes	TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr2:97867947C>G	ENST00000420699.2	+	47	3110	c.2866C>G	c.(2866-2868)Cag>Gag	p.Q956E	ANKRD36_ENST00000461153.2_Missense_Mutation_p.Q956E	NM_001164315.1	NP_001157787.1	A6QL64	AN36A_HUMAN	ankyrin repeat domain 36	956										endometrium(9)|kidney(5)|liver(1)|lung(3)|ovary(2)|prostate(2)|upper_aerodigestive_tract(1)	23						AGTGTCTTCTCAGAAACCACC	0.343000													3	38					0	0	1	0	0
BRAF	673	broad.mit.edu	37	7	140453136	140453136	+	Missense_Mutation	SNP	A	A	T	rs121913377		TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr7:140453136A>T	ENST00000288602.6	-	15	1859	c.1799T>A	c.(1798-1800)gTg>gAg	p.V600E		NM_004333.4	NP_004324.2	P15056	BRAF_HUMAN	v-raf murine sarcoma viral oncogene homolog B	600	Protein kinase.		V -> D (in a melanoma cell line; requires 2 nucleotide substitutions).|V -> E (in sarcoma, colorectal adenocarcinoma, metastatic melanoma, ovarian serous carcinoma, pilocytic astrocytoma; somatic mutation; most common mutation; constitutive and elevated kinase activity; efficiently induces cell transformation; suppression of mutation in melanoma causes growth arrest and promotes apoptosis).		activation of MAPKK activity|anti-apoptosis|nerve growth factor receptor signaling pathway|organ morphogenesis|positive regulation of peptidyl-serine phosphorylation|small GTPase mediated signal transduction|synaptic transmission	cytosol|nucleus|plasma membrane	ATP binding|metal ion binding	p.V600E(15453)|p.V600K(252)|p.V600R(44)|p.V600D(16)|p.V600A(12)|p.V600_K601>E(12)|p.V600G(11)|p.T599_R603>I(2)|p.V600Q(2)|p.V600_S605>EK(1)|p.V600_S605>DV(1)|p.V600_S605>D(1)|p.T599_V600insDFGLAT(1)	SLC45A3/BRAF(2)|AGTRAP/BRAF(2)|FAM131B_ENST00000443739/BRAF(7)|AKAP9_ENST00000356239/BRAF(10)|KIAA1549/BRAF(703)|FCHSD1/BRAF(2)	NS(588)|adrenal_gland(3)|autonomic_ganglia(3)|biliary_tract(29)|bone(7)|breast(21)|central_nervous_system(99)|cervix(6)|endometrium(33)|eye(72)|gastrointestinal_tract_(site_indeterminate)(2)|genital_tract(4)|haematopoietic_and_lymphoid_tissue(436)|kidney(3)|large_intestine(6953)|liver(17)|lung(192)|oesophagus(4)|ovary(275)|pancreas(15)|pituitary(1)|prostate(25)|salivary_gland(1)|skin(6285)|small_intestine(12)|soft_tissue(40)|stomach(11)|testis(7)|thyroid(12220)|upper_aerodigestive_tract(13)|urinary_tract(3)	27380	Melanoma(164;0.00956)				Sorafenib(DB00398)	TCGAGATTTCACTGTAGCTAG	0.368000	V600D(K029AX_SKIN)|V600D(WM115_SKIN)|V600D(WM2664_SKIN)|V600E(8505C_THYROID)|V600E(A101D_SKIN)|V600E(A2058_SKIN)|V600E(A375_SKIN)|V600E(A673_BONE)|V600E(AM38_CENTRAL_NERVOUS_SYSTEM)|V600E(BCPAP_THYROID)|V600E(BHT101_THYROID)|V600E(BT474_BREAST)|V600E(C32_SKIN)|V600E(CL34_LARGE_INTESTINE)|V600E(COLO205_LARGE_INTESTINE)|V600E(COLO679_SKIN)|V600E(COLO741_SKIN)|V600E(COLO783_SKIN)|V600E(COLO800_SKIN)|V600E(COLO818_SKIN)|V600E(COLO829_SKIN)|V600E(COLO849_SKIN)|V600E(DBTRG05MG_CENTRAL_NERVOUS_SYSTEM)|V600E(DU4475_BREAST)|V600E(ES2_OVARY)|V600E(G361_SKIN)|V600E(GCT_SOFT_TISSUE)|V600E(HS294T_SKIN)|V600E(HS695T_SKIN)|V600E(HS939T_SKIN)|V600E(IGR1_SKIN)|V600E(IGR37_SKIN)|V600E(IGR39_SKIN)|V600E(K029AX_SKIN)|V600E(KG1C_CENTRAL_NERVOUS_SYSTEM)|V600E(LOXIMVI_SKIN)|V600E(MALME3M_SKIN)|V600E(MELHO_SKIN)|V600E(OUMS23_LARGE_INTESTINE)|V600E(RKO_LARGE_INTESTINE)|V600E(RPMI7951_SKIN)|V600E(RVH421_SKIN)|V600E(SH4_SKIN)|V600E(SIGM5_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE)|V600E(SKHEP1_LIVER)|V600E(SKMEL24_SKIN)|V600E(SKMEL28_SKIN)|V600E(SKMEL5_SKIN)|V600E(SW1417_LARGE_INTESTINE)|V600E(UACC257_SKIN)|V600E(UACC62_SKIN)|V600E(WM793_SKIN)|V600E(WM88_SKIN)|V600E(WM983B_SKIN)	61	"""Mis, T, O"""	"""AKAP9, KIAA1549"""	"""melanoma, colorectal, papillary thyroid, borderline ov, Non small-cell lung cancer (NSCLC), cholangiocarcinoma, pilocytic astrocytoma"""		Cardio-facio-cutaneous syndrome		Cardiofaciocutaneous syndrome				25	46					0	0	1	0	0
POM121L9P	0	broad.mit.edu	37	22	24659578	24659578	+	RNA	SNP	A	A	G			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr22:24659578A>G	ENST00000414583.2	+	0	3103					NR_003714.1																						TGCGCAGGCCAACACTCACTG	0.617000													3	21					0	0	1	0	0
LINC00969	0	broad.mit.edu	37	3	195400728	195400728	+	RNA	SNP	A	A	G	rs12107841	by1000genomes	TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr3:195400728A>G	ENST00000445430.1	+	0	1324																											GATTGTGCCCAGCCTGTACGC	0.587000													4	40					0	0	1	0	0
EGFL8	80864	broad.mit.edu	37	6	32134984	32134984	+	Missense_Mutation	SNP	T	T	C			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr6:32134984T>C	ENST00000395512.1	+	6	656	c.551T>C	c.(550-552)aTg>aCg	p.M184T	PPT2-EGFL8_ENST00000422437.1_3'UTR|EGFL8_ENST00000333845.6_Missense_Mutation_p.M184T			Q99944	EGFL8_HUMAN	EGF-like-domain, multiple 8	184	EGF-like 2; calcium-binding (Potential).					extracellular region|integral to membrane	calcium ion binding			cervix(1)|endometrium(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(1)|lung(4)|urinary_tract(1)	10						CGCACCTGCATGGAGGGGTCC	0.662000													23	44					0	0	1	0	0
CPM	1368	broad.mit.edu	37	12	69279639	69279639	+	Missense_Mutation	SNP	C	C	T			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr12:69279639C>T	ENST00000551568.1	-	3	251	c.191G>A	c.(190-192)cGg>cAg	p.R64Q	CPM_ENST00000546373.1_Missense_Mutation_p.R64Q|CPM_ENST00000338356.3_Missense_Mutation_p.R64Q	NM_001005502.2|NM_198320.3	NP_001005502.1|NP_938079.1	P14384	CBPM_HUMAN	carboxypeptidase M	64					anatomical structure morphogenesis|proteolysis	anchored to membrane|cytoplasm|nucleus|plasma membrane	metallocarboxypeptidase activity|zinc ion binding			large_intestine(1)|lung(6)|prostate(2)	9	all_epithelial(5;1.09e-35)|Lung NSC(4;1.47e-33)|all_lung(4;1.02e-31)|Breast(13;1.59e-06)		all cancers(2;2.69e-50)|GBM - Glioblastoma multiforme(2;7.34e-41)|BRCA - Breast invasive adenocarcinoma(5;5.38e-10)|Lung(24;4.61e-05)|LUAD - Lung adenocarcinoma(15;0.000376)|STAD - Stomach adenocarcinoma(21;0.00372)|Kidney(9;0.143)			CTTTGGAAACCGCCCCACAAC	0.398000													41	66					0	0	1	0	0
CDK19	23097	broad.mit.edu	37	6	110935828	110935828	+	Silent	SNP	T	T	C			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr6:110935828T>C	ENST00000368911.3	-	13	1598	c.1419A>G	c.(1417-1419)ggA>ggG	p.G473G	CDK19_ENST00000323817.3_Silent_p.G413G|CDK19_ENST00000413605.2_Silent_p.G349G	NM_015076.3	NP_055891.1	Q9BWU1	CDK19_HUMAN	cyclin-dependent kinase 19	473	Ser-rich.						ATP binding|cyclin-dependent protein kinase activity|protein binding			breast(1)|central_nervous_system(1)|endometrium(1)|large_intestine(5)|lung(9)|ovary(2)|prostate(2)|skin(1)	22						ACTGAGAGGATCCCTGAACGC	0.537000													25	50					0	0	1	0	0
CNNM4	26504	broad.mit.edu	37	2	97427918	97427918	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr2:97427918delC	ENST00000377075.2	+	1	1280	c.1182delC	c.(1180-1182)ttfs	p.F394fs		NM_020184.3	NP_064569.3	Q6P4Q7	CNNM4_HUMAN	cyclin M4	394	CBS 1.				biomineral tissue development|ion transport|response to stimulus|visual perception	integral to membrane|plasma membrane				breast(2)|endometrium(4)|kidney(1)|large_intestine(1)|lung(9)|ovary(1)|prostate(2)	20						TCCTGGACTTCAACACCATGT	0.502													25	44	---	---	---	---					
MAFK	7975	broad.mit.edu	37	7	1579674	1579674	+	Frame_Shift_Del	DEL	C	C	-			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr7:1579674delC	ENST00000343242.4	+	3	363	c.134delC	c.(133-135)acfs	p.T45fs		NM_002360.3	NP_002351.1	O60675	MAFK_HUMAN	v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K	45					blood coagulation	nucleoplasm	sequence-specific DNA binding|sequence-specific DNA binding transcription factor activity						Ovarian(82;0.0253)		UCEC - Uterine corpus endometrioid carcinoma (27;0.0178)|OV - Ovarian serous cystadenocarcinoma(56;5.75e-15)		CGGGGTCTCACCAAGGAGGAG	0.662													2	4	---	---	---	---					
PMS2P4	0	broad.mit.edu	37	7	66762433	66762433	+	RNA	DEL	A	A	-	rs68053451		TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr7:66762433delA	ENST00000414507.1	-	0	184																											tctcaaaaagaaaaaaaaaaa	0.408													6	2	---	---	---	---					
STEAP2-AS1	0	broad.mit.edu	37	7	89748927	89748928	+	RNA	INS	-	-	C	rs138239781	by1000genomes	TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr7:89748927_89748928insC	ENST00000478318.2	-	0	424				RP5-1121E10.2_ENST00000471553.1_lincRNA|DPY19L2P4_ENST00000497063.1_RNA																							GGTGCGGGCCTCCCCCTTCCCC	0.639													6	3	---	---	---	---					
RGP1	9827	broad.mit.edu	37	9	35752094	35752103	+	Frame_Shift_Del	DEL	TCCCTCCCAA	TCCCTCCCAA	-			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr9:35752094_35752103delTCCCTCCCAA	ENST00000378078.4	+	8	1045_1054	c.904_913delTCCCTCCCAA	c.(904-915)tcfs	p.SLPI302fs	RGP1_ENST00000456972.2_Frame_Shift_Del_p.SLPI342fs	NM_001080496.2	NP_001073965.2	Q92546	RGP1_HUMAN	RGP1 retrograde golgi transport homolog (S. cerevisiae)	302										cervix(1)|kidney(3)|large_intestine(1)|lung(4)|ovary(1)|prostate(1)|upper_aerodigestive_tract(1)|urinary_tract(2)	14	all_epithelial(49;0.167)		Lung(28;0.00416)|LUSC - Lung squamous cell carcinoma(32;0.00418)|STAD - Stomach adenocarcinoma(86;0.194)			AACCAGCTTCTCCCTCCCAATCCCTCTCAG	0.581													11	18	---	---	---	---					
HHIPL1	84439	broad.mit.edu	37	14	100125953	100125953	+	Frame_Shift_Del	DEL	G	G	-			TCGA-DJ-A3V0-01A-11D-A22Z-08	TCGA-DJ-A3V0-10A-01D-A22Z-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	cf3b3dca-841d-4f4e-982b-596821aea371	a11340d0-5dc6-4bbe-a1ef-d48afe313e52	g.chr14:100125953delG	ENST00000330710.5	+	4	1333	c.1235delG	c.(1234-1236)ccfs	p.R412fs	HHIPL1_ENST00000357223.2_Frame_Shift_Del_p.R412fs	NM_001127258.1	NP_001120730.1	Q96JK4	HIPL1_HUMAN	HHIP-like 1	412					carbohydrate metabolic process	extracellular region|membrane	oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor|quinone binding|scavenger receptor activity			breast(1)|endometrium(2)|large_intestine(2)|lung(8)|skin(2)	15		Melanoma(154;0.128)				GGCACTGGCCGCGGGCGCCTC	0.726													2	4	---	---	---	---					
