Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
AHI1	54806	broad.mit.edu	37	6	135784313	135784313	+	Missense_Mutation	SNP	T	T	C			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr6:135784313T>C	ENST00000367800.4	-	6	1097	c.881A>G	c.(880-882)cAa>cGa	p.Q294R	AHI1_ENST00000327035.6_Missense_Mutation_p.Q294R|AHI1_ENST00000457866.2_Missense_Mutation_p.Q294R	NM_001134830.1	NP_001128302.1	Q8N157	AHI1_HUMAN	Abelson helper integration site 1	294						adherens junction|cilium|microtubule basal body		p.Q294R(1)		NS(1)|breast(1)|central_nervous_system(1)|endometrium(5)|haematopoietic_and_lymphoid_tissue(1)|kidney(3)|large_intestine(6)|lung(18)|ovary(1)	37	Breast(56;0.239)|Colorectal(23;0.24)			GBM - Glioblastoma multiforme(68;0.00904)|OV - Ovarian serous cystadenocarcinoma(155;0.00991)		TGTATCATCTTGCATGCTGTC	0.313000													5	66					0	0	1	0	0
ST6GALNAC2	10610	broad.mit.edu	37	17	74562272	74562272	+	Missense_Mutation	SNP	A	A	G			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr17:74562272A>G	ENST00000225276.5	-	9	1358	c.1039T>C	c.(1039-1041)Ttt>Ctt	p.F347L		NM_006456.2	NP_006447.2	Q9UJ37	SIA7B_HUMAN	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2	347					protein glycosylation	integral to Golgi membrane	sialyltransferase activity			NS(1)|cervix(1)|endometrium(1)|kidney(1)|large_intestine(2)|lung(1)|prostate(1)|skin(2)|upper_aerodigestive_tract(1)	11						TTTGCATAAAATATCAATGGC	0.502000													58	92					0	0	1	0	0
PNKP	11284	broad.mit.edu	37	19	50370414	50370414	+	Silent	SNP	A	A	G			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr19:50370414A>G	ENST00000322344.3	-	2	157	c.48T>C	c.(46-48)ccT>ccC	p.P16P	PNKP_ENST00000600573.1_Silent_p.P16P|PNKP_ENST00000600910.1_Silent_p.P16P|PNKP_ENST00000596014.1_Silent_p.P16P|PNKP_ENST00000595792.1_5'UTR	NM_007254.3	NP_009185.2	Q96T60	PNKP_HUMAN	polynucleotide kinase 3'-phosphatase	16					DNA damage response, detection of DNA damage|DNA-dependent DNA replication|nucleotide-excision repair, DNA damage removal|response to oxidative stress|response to radiation	nucleolus	ATP binding|ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity|damaged DNA binding|double-stranded DNA binding|endonuclease activity|nucleotide kinase activity|polynucleotide 3'-phosphatase activity|protein binding	p.P16P(8)		breast(1)|cervix(1)|endometrium(2)|kidney(2)|large_intestine(1)|lung(10)|ovary(1)|urinary_tract(1)	19		all_lung(116;1.05e-05)|Lung NSC(112;3.77e-05)|all_neural(266;0.107)|Ovarian(192;0.231)		GBM - Glioblastoma multiforme(134;0.0118)|OV - Ovarian serous cystadenocarcinoma(262;0.0134)		GCGCTCCCCCAGGGGGGCTCT	0.721000								Other BER factors					7	25					0	0	1	0	0
OR5B2	390190	broad.mit.edu	37	11	58190069	58190069	+	Silent	SNP	G	G	A			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr11:58190069G>A	ENST00000302581.2	-	1	717	c.666C>T	c.(664-666)acC>acT	p.T222T		NM_001005566.2	NP_001005566.1	Q96R09	OR5B2_HUMAN	olfactory receptor, family 5, subfamily B, member 2	222					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			NS(2)|large_intestine(2)|lung(19)|ovary(3)|skin(3)|stomach(1)|upper_aerodigestive_tract(1)|urinary_tract(1)	32	Esophageal squamous(5;0.0027)	Breast(21;0.0778)				TCTTCAAGATGGTGATGAATA	0.383000													5	65					0	0	1	0	0
LINC00969	0	broad.mit.edu	37	3	195400728	195400728	+	RNA	SNP	A	A	G	rs12107841	by1000genomes	TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr3:195400728A>G	ENST00000445430.1	+	0	1324																											GATTGTGCCCAGCCTGTACGC	0.587000													3	35					0	0	1	0	0
XDH	7498	broad.mit.edu	37	2	31572963	31572963	+	Missense_Mutation	SNP	C	C	G			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr2:31572963C>G	ENST00000379416.3	-	25	2806	c.2758G>C	c.(2758-2760)Ggg>Cgg	p.G920R		NM_000379.3	NP_000370.2	P47989	XDH_HUMAN	xanthine dehydrogenase	920					purine nucleotide catabolic process|xanthine catabolic process	cytosol|extracellular region|peroxisome	2 iron, 2 sulfur cluster binding|electron carrier activity|flavin adenine dinucleotide binding|iron ion binding|molybdopterin cofactor binding|protein homodimerization activity|xanthine dehydrogenase activity|xanthine oxidase activity			breast(3)|central_nervous_system(2)|cervix(1)|endometrium(6)|haematopoietic_and_lymphoid_tissue(1)|kidney(2)|large_intestine(13)|lung(31)|ovary(1)|pancreas(1)|prostate(3)|skin(9)|urinary_tract(1)	74	Acute lymphoblastic leukemia(172;0.155)				Allopurinol(DB00437)|Carvedilol(DB01136)|Daunorubicin(DB00694)|Deferoxamine(DB00746)|Desflurane(DB01189)|Menadione(DB00170)|Mercaptopurine(DB01033)|Methotrexate(DB00563)|NADH(DB00157)|Nitrofurazone(DB00336)|Papaverine(DB01113)|Procarbazine(DB01168)|Pyrazinamide(DB00339)|Rasburicase(DB00049)|Spermine(DB00127)|Trifluoperazine(DB00831)|Vitamin E(DB00163)	ATGAGCATCCCCTGGGGCCCC	0.577000													8	197					0	0	1	0	0
TP53BP2	7159	broad.mit.edu	37	1	223986347	223986347	+	Silent	SNP	A	A	C			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr1:223986347A>C	ENST00000391878.2	-	13	1899	c.1131T>G	c.(1129-1131)ccT>ccG	p.P377P	TP53BP2_ENST00000343537.7_Silent_p.P506P|TP53BP2_ENST00000498843.1_5'UTR|TP53BP2_ENST00000391879.2_Intron	NM_005426.2	NP_005417.1	Q13625	ASPP2_HUMAN	tumor protein p53 binding protein, 2	500					apoptosis|cell cycle|induction of apoptosis|negative regulation of cell cycle|signal transduction	nucleus|perinuclear region of cytoplasm	NF-kappaB binding|protein binding|SH3 domain binding|SH3/SH2 adaptor activity			NS(1)|endometrium(4)|kidney(3)|large_intestine(7)|lung(9)|ovary(2)|prostate(1)|skin(2)	29				GBM - Glioblastoma multiforme(131;0.0958)		TAGGAACAGGAGGTGGTACTT	0.368000													31	53					0	0	1	0	0
SH3PXD2B	285590	broad.mit.edu	37	5	171773196	171773196	+	Missense_Mutation	SNP	C	C	T			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr5:171773196C>T	ENST00000311601.5	-	12	1302	c.1132G>A	c.(1132-1134)Gaa>Aaa	p.E378K	SH3PXD2B_ENST00000519643.1_Missense_Mutation_p.E378K	NM_001017995.2	NP_001017995.1	A1X283	SPD2B_HUMAN	SH3 and PX domains 2B	378	SH3 3.				adipose tissue development|bone development|cell communication|cell differentiation|eye development|heart development|podosome assembly	cell junction|cell projection|cytoplasm|podosome	phosphatidylinositol-3,5-bisphosphate binding|phosphatidylinositol-3-phosphate binding|phosphatidylinositol-5-phosphate binding|SH2 domain binding			NS(1)|breast(1)|endometrium(1)|kidney(3)|large_intestine(9)|lung(12)|ovary(3)|prostate(1)|skin(3)|stomach(1)|upper_aerodigestive_tract(1)	36	Renal(175;0.000159)|Lung NSC(126;0.011)|all_lung(126;0.0175)	Medulloblastoma(196;0.0207)|all_neural(177;0.0625)	Kidney(164;7.24e-05)|KIRC - Kidney renal clear cell carcinoma(164;0.000516)			GTCTGGAATTCGGCGATGGTG	0.567000													82	143					0	0	1	0	0
RP11-119F19.2	0	broad.mit.edu	37	10	81443821	81443821	+	RNA	SNP	C	C	G	rs150975459	by1000genomes	TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr10:81443821C>G	ENST00000600376.1	-	0	54				RP11-119F19.2_ENST00000596088.1_RNA																							GCAGCACCATCGCCTCAGACC	0.612000													3	33					0	0	1	0	0
CDC37L1	55664	broad.mit.edu	37	9	4684993	4684993	+	Silent	SNP	G	G	A			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr9:4684993G>A	ENST00000381854.3	+	2	451	c.249G>A	c.(247-249)ctG>ctA	p.L83L	CDC37L1_ENST00000479095.1_3'UTR|CDC37L1_ENST00000381858.1_Silent_p.L83L	NM_017913.2	NP_060383.2	Q7L3B6	CD37L_HUMAN	cell division cycle 37-like 1	83	Self-association.					cytoplasm				breast(1)|kidney(1)|lung(2)	4	all_hematologic(13;0.137)	Breast(48;0.238)		GBM - Glioblastoma multiforme(50;0.0318)		GCTTAGCACTGCATAATTCTG	0.463000													4	72					0	0	1	0	0
CHRNB4	1143	broad.mit.edu	37	15	78917350	78917350	+	Missense_Mutation	SNP	T	T	G			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr15:78917350T>G	ENST00000412074.2	-	5	754	c.643A>C	c.(643-645)Acc>Ccc	p.T215P	CHRNB4_ENST00000261751.3_3'UTR	NM_001256567.1	NP_001243496.1	P30926	ACHB4_HUMAN	cholinergic receptor, nicotinic, beta 4 (neuronal)	0					regulation of neurotransmitter secretion|synaptic transmission involved in micturition|synaptic transmission, cholinergic	cell junction|nicotinic acetylcholine-gated receptor-channel complex|postsynaptic membrane	acetylcholine receptor activity|nicotinic acetylcholine-activated cation-selective channel activity			endometrium(7)|kidney(1)|lung(13)|prostate(1)	22						CTGTGGCTGGTTTGATGGGGT	0.572000													6	31					0	0	1	0	0
PPARGC1A	10891	broad.mit.edu	37	4	23833371	23833371	+	Missense_Mutation	SNP	T	T	C			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr4:23833371T>C	ENST00000264867.2	-	3	357	c.238A>G	c.(238-240)Ata>Gta	p.I80V	PPARGC1A_ENST00000509702.1_5'UTR	NM_013261.3	NP_037393.1	Q9UBK2	PRGC1_HUMAN	peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	80					androgen receptor signaling pathway|brown fat cell differentiation|cellular glucose homeostasis|digestion|fatty acid oxidation|gluconeogenesis|mitochondrion organization|mRNA processing|neuron death|positive regulation of fatty acid oxidation|positive regulation of gluconeogenesis|positive regulation of histone acetylation|positive regulation of sequence-specific DNA binding transcription factor activity|positive regulation of transcription from RNA polymerase II promoter|protein complex assembly|protein stabilization|response to muscle activity|response to starvation|RNA splicing|temperature homeostasis|transcription initiation from RNA polymerase II promoter	DNA-directed RNA polymerase II, core complex	androgen receptor binding|DNA binding|ligand-dependent nuclear receptor binding|ligand-dependent nuclear receptor transcription coactivator activity|nucleotide binding|RNA binding|RNA polymerase II transcription cofactor activity|transcription factor binding			central_nervous_system(1)|endometrium(7)|kidney(3)|large_intestine(7)|liver(1)|lung(24)|ovary(3)|skin(5)	51		Breast(46;0.0503)				TCTTCATCTATCTTCTGCAGA	0.458000													79	118					0	0	1	0	0
RNF168	165918	broad.mit.edu	37	3	196214338	196214338	+	Frame_Shift_Del	DEL	T	T	-			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr3:196214338delT	ENST00000318037.3	-	3	1084	c.490delA	c.(490-492)ggfs	p.R166fs		NM_152617.3	NP_689830.2	Q8IYW5	RN168_HUMAN	ring finger protein 168, E3 ubiquitin protein ligase	166	Glu-rich.				double-strand break repair|histone H2A K63-linked ubiquitination|positive regulation of DNA repair|response to ionizing radiation	nucleus|ubiquitin ligase complex	chromatin binding|histone binding|ubiquitin binding|ubiquitin-protein ligase activity|zinc ion binding			NS(1)|endometrium(2)|large_intestine(7)|lung(9)|ovary(1)	20	all_cancers(143;1e-08)|Ovarian(172;0.0634)|Breast(254;0.206)		Epithelial(36;5.25e-24)|all cancers(36;5.47e-22)|OV - Ovarian serous cystadenocarcinoma(49;1.76e-18)|LUSC - Lung squamous cell carcinoma(58;1.51e-06)|Lung(62;1.95e-06)	GBM - Glioblastoma multiforme(46;0.00348)		GCTCTTCGCCTTTTTTCTGCC	0.448													7	379	---	---	---	---					
YTHDC2	64848	broad.mit.edu	37	5	112862416	112862417	+	Frame_Shift_Ins	INS	-	-	A			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr5:112862416_112862417insA	ENST00000161863.4	+	4	822_823	c.609_610insA	c.(607-612)gtaaatfs	p.N204fs	YTHDC2_ENST00000515883.1_Frame_Shift_Ins_p.N204fs	NM_022828.3	NP_073739.3	Q9H6S0	YTDC2_HUMAN	YTH domain containing 2	204	Helicase ATP-binding.						ATP binding|ATP-dependent helicase activity|nucleic acid binding			NS(2)|central_nervous_system(2)|cervix(1)|endometrium(2)|kidney(6)|large_intestine(13)|lung(10)|pancreas(1)|prostate(3)|skin(2)|upper_aerodigestive_tract(1)	43		all_cancers(142;7.69e-05)|all_epithelial(76;6.42e-07)|Colorectal(10;0.00278)|Prostate(80;0.00955)|Ovarian(225;0.0444)|Lung NSC(810;0.143)|all_lung(232;0.163)|Breast(839;0.244)		OV - Ovarian serous cystadenocarcinoma(64;7.2e-08)|Epithelial(69;8.83e-08)|all cancers(49;6.9e-06)|COAD - Colon adenocarcinoma(37;0.0458)|Colorectal(14;0.0594)		AAGAAATTGTTAAAATAATTAA	0.327													7	90	---	---	---	---					
PNLIPRP2	5408	broad.mit.edu	37	10	118396277	118396277	+	RNA	DEL	G	G	-	rs148140777	by1000genomes	TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr10:118396277delG	ENST00000537242.1	+	0	962				PNLIPRP2_ENST00000433618.4_RNA|PNLIPRP2_ENST00000298771.7_RNA	NM_005396.4	NP_005387.2	P54317	LIPR2_HUMAN	pancreatic lipase-related protein 2						galactolipid catabolic process|lipid digestion|phospholipid catabolic process|triglyceride metabolic process	extracellular space	acylglycerol lipase activity|calcium ion binding|galactolipase activity|phospholipase activity|triglyceride lipase activity			endometrium(1)|large_intestine(1)|lung(11)|prostate(3)	16				all cancers(201;0.015)		GACAAATTATGGTTTTTTTTT	0.423													5	8	---	---	---	---					
CLIP1	6249	broad.mit.edu	37	12	122812690	122812691	+	Frame_Shift_Ins	INS	-	-	T			TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr12:122812690_122812691insT	ENST00000358808.2	-	16	3173_3174	c.3019_3020insA	c.(3019-3021)ccafs	p.P1007fs	CLIP1_ENST00000537178.1_Frame_Shift_Ins_p.P972fs|CLIP1_ENST00000361654.4_Frame_Shift_Ins_p.P896fs|CLIP1_ENST00000302528.7_Frame_Shift_Ins_p.P1007fs|CLIP1_ENST00000545889.1_Frame_Shift_Ins_p.P593fs|CLIP1_ENST00000540338.1_Frame_Shift_Ins_p.P1018fs	NM_001247997.1|NM_002956.2	NP_001234926.1|NP_002947.1	P30622	CLIP1_HUMAN	CAP-GLY domain containing linker protein 1	1018					mitotic prometaphase|positive regulation of microtubule polymerization	centrosome|cytosol|endosome|intermediate filament|kinetochore	nucleic acid binding|protein homodimerization activity|zinc ion binding			NS(1)|breast(5)|endometrium(4)|kidney(5)|large_intestine(16)|liver(1)|lung(21)|ovary(2)|prostate(3)|upper_aerodigestive_tract(1)|urinary_tract(1)	60	all_neural(191;0.0837)|Medulloblastoma(191;0.163)			OV - Ovarian serous cystadenocarcinoma(86;1.81e-05)|Epithelial(86;6.85e-05)|BRCA - Breast invasive adenocarcinoma(302;0.226)		CTGGTTGTGGCTTGTTTCCATT	0.505													9	249	---	---	---	---					
EP400	57634	broad.mit.edu	37	12	132547135	132547136	+	In_Frame_Ins	INS	-	-	CAG	rs144787206	byFrequency	TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr12:132547135_132547136insCAG	ENST00000333577.4	+	48	8440_8441	c.8331_8332insCAG	c.(8329-8334)caaaca>caCAGaaca	p.2777_2777Q>HR	EP400_ENST00000330386.6_In_Frame_Ins_p.2660_2660Q>HR|EP400_ENST00000332482.4_In_Frame_Ins_p.2704_2704Q>HR|EP400_ENST00000389561.2_In_Frame_Ins_p.2741_2741Q>HR|EP400_ENST00000389562.2_In_Frame_Ins_p.2740_2740Q>HR			Q96L91	EP400_HUMAN	E1A binding protein p400	2777	Interaction with ZNF42 (By similarity).|Poly-Gln.				histone H2A acetylation|histone H4 acetylation|regulation of transcription, DNA-dependent	NuA4 histone acetyltransferase complex|nuclear speck	ATP binding|DNA binding|helicase activity			NS(1)|breast(6)|central_nervous_system(10)|cervix(1)|endometrium(21)|kidney(13)|large_intestine(25)|lung(56)|ovary(5)|prostate(8)|skin(6)|stomach(4)|upper_aerodigestive_tract(2)|urinary_tract(3)	161	all_neural(191;0.0982)|Medulloblastoma(191;0.163)	all_epithelial(31;0.198)		OV - Ovarian serous cystadenocarcinoma(86;3.01e-08)|Epithelial(86;3.43e-07)|all cancers(50;2.01e-06)		agcagcagcagcaacagcagca	0.589													9	99	---	---	---	---					
RRN3P1	0	broad.mit.edu	37	16	21817398	21817399	+	RNA	INS	-	-	A	rs144931984	by1000genomes	TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr16:21817398_21817399insA	ENST00000546471.1	-	0	1607																											TAAATGaaaataaaaaaataaa	0.302													3	3	---	---	---	---					
POLDIP2	26073	broad.mit.edu	37	17	26684394	26684395	+	Splice_Site	INS	-	-	G	rs113730440		TCGA-EL-A3ZP-01A-11D-A23M-08	TCGA-EL-A3ZP-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	d5abd938-1b6a-428e-b8bf-27735c50eda0	09b2073c-4af3-4cd5-a3bb-bdeac945d63b	g.chr17:26684394_26684395insG	ENST00000540200.1	-	1	78		c.e1+1		POLDIP2_ENST00000003607.4_5'UTR	NM_015584.3	NP_056399.1	Q9Y2S7	PDIP2_HUMAN	polymerase (DNA-directed), delta interacting protein 2							mitochondrial nucleoid|nucleus						all_lung(13;0.000354)|Lung NSC(42;0.00115)			UCEC - Uterine corpus endometrioid carcinoma (53;0.154)		AGAGCGGCTTTGCCACCGGGCC	0.762													8	6	---	---	---	---					
