Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
POFUT2	23275	broad.mit.edu	37	21	46689817	46689817	+	Missense_Mutation	SNP	G	G	A			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr21:46689817G>A	ENST00000331343.7	-	7	975	c.949C>T	c.(949-951)Cgc>Tgc	p.R317C	POFUT2_ENST00000471540.1_5'UTR|POFUT2_ENST00000349485.5_Missense_Mutation_p.R317C	NM_015227.4	NP_056042.1	Q9Y2G5	OFUT2_HUMAN	protein O-fucosyltransferase 2	317					fucose metabolic process	endoplasmic reticulum	peptide-O-fucosyltransferase activity			breast(1)|endometrium(1)|kidney(2)|large_intestine(2)|liver(1)|lung(9)|skin(2)|upper_aerodigestive_tract(2)	20				Colorectal(79;0.243)		ATGAGGCTGCGGATCTTCCTC	0.542000													9	55					0	0	1	0	0
PCDH12	51294	broad.mit.edu	37	5	141329142	141329142	+	Silent	SNP	T	T	C			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr5:141329142T>C	ENST00000231484.3	-	3	4195	c.2985A>G	c.(2983-2985)gcA>gcG	p.A995A		NM_016580.2	NP_057664.1	Q9NPG4	PCD12_HUMAN	protocadherin 12	995					neuron recognition	integral to plasma membrane	calcium ion binding			breast(2)|endometrium(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(13)|lung(14)|ovary(3)|prostate(2)|skin(1)	38		all_hematologic(541;0.0999)	KIRC - Kidney renal clear cell carcinoma(527;0.00112)|Kidney(363;0.00191)			TGTCTGGGATTGCACTCCTGC	0.493000													16	77					0	0	1	0	0
SH2D3A	10045	broad.mit.edu	37	19	6754188	6754188	+	Missense_Mutation	SNP	T	T	C	rs2305807	by1000genomes	TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr19:6754188T>C	ENST00000437152.3	-	6	1112	c.980A>G	c.(979-981)gAt>gGt	p.D327G	SH2D3A_ENST00000245908.6_Intron			Q9BRG2	SH23A_HUMAN	SH2 domain containing 3A	425					JNK cascade|small GTPase mediated signal transduction	intracellular	guanyl-nucleotide exchange factor activity|SH3/SH2 adaptor activity			breast(3)|endometrium(3)|kidney(1)|large_intestine(4)|lung(9)|skin(3)|urinary_tract(1)	24						GGAGAAGAGATCTGAGCACGC	0.657000													3	18					0	0	1	0	0
TERT	0	broad.mit.edu	37	5	1280291	1280291	+	Silent	SNP	C	C	T	rs148582238		TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr5:1280291C>T	ENST00000310581.5	-	4	1989	c.1932G>A	c.(1930-1932)acG>acA	p.T644T	TERT_ENST00000296820.5_Silent_p.T644T|TERT_ENST00000508104.2_Silent_p.T644T|TERT_ENST00000334602.6_Silent_p.T644T	NM_001193376.1|NM_198253.2	NP_001180305.1|NP_937983.2	O14746	TERT_HUMAN	telomerase reverse transcriptase	644	Reverse transcriptase.				anti-apoptosis|DNA strand elongation|replicative senescence|telomere formation via telomerase|telomere maintenance via telomerase	cytoplasm|nucleolus|PML body|telomerase holoenzyme complex	protein homodimerization activity|telomeric DNA binding|telomeric RNA binding|telomeric template RNA reverse transcriptase activity			NS(1)|breast(1)|central_nervous_system(3)|endometrium(2)|kidney(4)|large_intestine(3)|lung(22)|ovary(2)|skin(2)|upper_aerodigestive_tract(1)	41	all_cancers(3;3.17e-16)|Lung NSC(6;8.55e-15)|all_lung(6;7.2e-14)|all_epithelial(6;1.87e-10)		Epithelial(17;0.00105)|all cancers(22;0.00178)|OV - Ovarian serous cystadenocarcinoma(19;0.00239)|Lung(60;0.185)			CTCTGCGGAACGTTCTGGCTC	0.552000									TERT Mutation-Associated Haematological Disorders;Pulmonary Fibrosis, Idiopathic;Congenital Dyskeratosis				6	99					0	0	1	0	0
ADAM21	8747	broad.mit.edu	37	14	70924812	70924812	+	Missense_Mutation	SNP	C	C	T			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr14:70924812C>T	ENST00000603540.1	+	2	854	c.596C>T	c.(595-597)tCt>tTt	p.S199F	ADAM21_ENST00000267499.3_Missense_Mutation_p.S199F|RP11-486O13.4_ENST00000556646.1_lincRNA	NM_003813.3	NP_003804.2	Q9UKJ8	ADA21_HUMAN	ADAM metallopeptidase domain 21	199					proteolysis|single fertilization	integral to membrane	metalloendopeptidase activity|zinc ion binding			central_nervous_system(1)|endometrium(1)|kidney(4)|large_intestine(10)|lung(10)|pancreas(1)|prostate(1)|skin(2)|stomach(1)	31				all cancers(60;0.00326)|BRCA - Breast invasive adenocarcinoma(234;0.00646)|OV - Ovarian serous cystadenocarcinoma(108;0.0401)		GAACCAAAATCTGCTGGTGAC	0.448000													5	88					0	0	1	0	0
KDR	3791	broad.mit.edu	37	4	55946325	55946325	+	Missense_Mutation	SNP	A	A	G			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr4:55946325A>G	ENST00000263923.4	-	30	4149	c.3854T>C	c.(3853-3855)aTg>aCg	p.M1285T	RP11-530I17.1_ENST00000511222.1_RNA	NM_002253.2	NP_002244.1	P35968	VGFR2_HUMAN	kinase insert domain receptor (a type III receptor tyrosine kinase)	1285					angiogenesis|cell differentiation|interspecies interaction between organisms|positive regulation of endothelial cell migration|positive regulation of endothelial cell proliferation|positive regulation of focal adhesion assembly|positive regulation of positive chemotaxis|regulation of cell shape	integral to plasma membrane	ATP binding|growth factor binding|Hsp90 protein binding|integrin binding|receptor signaling protein tyrosine kinase activity|vascular endothelial growth factor receptor activity			NS(1)|breast(3)|central_nervous_system(4)|endometrium(2)|haematopoietic_and_lymphoid_tissue(6)|kidney(8)|large_intestine(16)|lung(71)|ovary(2)|prostate(2)|skin(10)|soft_tissue(4)|stomach(3)|upper_aerodigestive_tract(1)|urinary_tract(2)	135	all_cancers(7;0.0255)|all_lung(4;0.00175)|Lung NSC(11;0.00384)|all_epithelial(27;0.034)|Glioma(25;0.08)|all_neural(26;0.101)		Epithelial(7;0.189)		Sorafenib(DB00398)|Sunitinib(DB01268)	GCTGGGCACCATTCCACTGCA	0.507000			Mis		"""NSCLC, angiosarcoma"""					TSP Lung(20;0.16)			8	37					0	0	1	0	0
TIAM2	26230	broad.mit.edu	37	6	155504495	155504495	+	Silent	SNP	G	G	C	rs145603552	byFrequency	TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr6:155504495G>C	ENST00000461783.3	+	16	4198	c.2925G>C	c.(2923-2925)ccG>ccC	p.P975P	TIAM2_ENST00000456877.2_Silent_p.P287P|TIAM2_ENST00000318981.5_Silent_p.P975P|TIAM2_ENST00000456144.1_Silent_p.P975P|TIAM2_ENST00000529824.2_Silent_p.P975P|TIAM2_ENST00000528391.2_Silent_p.P311P|TIAM2_ENST00000367174.2_Silent_p.P351P|TIAM2_ENST00000360366.4_Silent_p.P999P			Q8IVF5	TIAM2_HUMAN	T-cell lymphoma invasion and metastasis 2	975	PDZ.				apoptosis|cellular lipid metabolic process|induction of apoptosis by extracellular signals|nerve growth factor receptor signaling pathway|regulation of Rho protein signal transduction|small GTPase mediated signal transduction	cytosol|filopodium|growth cone|lamellipodium	receptor signaling protein activity|Rho guanyl-nucleotide exchange factor activity			breast(2)|endometrium(8)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(20)|lung(21)|ovary(5)|prostate(1)|skin(2)|upper_aerodigestive_tract(4)	65		Ovarian(120;0.196)		OV - Ovarian serous cystadenocarcinoma(155;8.1e-13)|BRCA - Breast invasive adenocarcinoma(81;0.0053)		CCCGGCCTCCGGACACAAAAG	0.547000													4	53					0	0	1	0	0
RP11-204M4.2	0	broad.mit.edu	37	9	41962602	41962602	+	RNA	SNP	G	G	T			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr9:41962602G>T	ENST00000454645.1	-	0	902					NR_003670.1																						TTCTTTCTTTGTTTTTTTTCC	0.373000													4	37					1	1	1	1	0
RP11-69H14.6	0	broad.mit.edu	37	15	22332432	22332432	+	RNA	SNP	C	C	T			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr15:22332432C>T	ENST00000558896.1	+	0	239																											AAGATTCTAACGTGACAGAAC	0.343000													10	43					0	0	1	0	0
RP11-417J8.6	0	broad.mit.edu	37	1	142713773	142713773	+	RNA	SNP	C	C	G			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr1:142713773C>G	ENST00000369381.2	-	0	832																											TCTTTTTCCACATTGTCATTT	0.284000													7	50					0	0	1	0	0
SYN2	6854	broad.mit.edu	37	3	12183431	12183431	+	RNA	SNP	G	G	A			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr3:12183431G>A	ENST00000432424.2	+	0	634							Q86VA8	Q86VA8_HUMAN	synapsin II						neurotransmitter secretion	synaptic vesicle	ATP binding|ligase activity			breast(5)|central_nervous_system(1)|endometrium(1)|large_intestine(5)|lung(5)|ovary(1)	18						TCAACCTGGTGGCCCATGCAG	0.478000													7	38					0	0	1	0	0
RP11-417J8.6	0	broad.mit.edu	37	1	142713944	142713944	+	RNA	SNP	C	C	T			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr1:142713944C>T	ENST00000369381.2	-	0	661																											TGATTACCTCCGAAGTTAAAG	0.308000													3	22					0	0	1	0	0
RP11-417J8.6	0	broad.mit.edu	37	1	142713774	142713774	+	RNA	SNP	A	A	G			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr1:142713774A>G	ENST00000369381.2	-	0	831																											CTTTTTCCACATTGTCATTTT	0.284000													7	49					0	0	1	0	0
OR8K5	219453	broad.mit.edu	37	11	55927697	55927697	+	Missense_Mutation	SNP	C	C	T			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr11:55927697C>T	ENST00000313447.1	-	1	96	c.97G>A	c.(97-99)Gtc>Atc	p.V33I		NM_001004058.2	NP_001004058.2	Q8NH50	OR8K5_HUMAN	olfactory receptor, family 8, subfamily K, member 5	33					sensory perception of smell	integral to membrane|plasma membrane	olfactory receptor activity			large_intestine(3)|lung(24)|ovary(2)|pancreas(2)|skin(1)|stomach(1)|upper_aerodigestive_tract(1)	34	Esophageal squamous(21;0.00693)	Lung NSC(402;0.197)|all_epithelial(135;0.236)				AGGTAGATGACGAGGAAGACT	0.433000													19	72					0	0	1	0	0
CDH8	1006	broad.mit.edu	37	16	61761114	61761114	+	Missense_Mutation	SNP	G	G	T			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr16:61761114G>T	ENST00000577390.1	-	9	2374	c.1420C>A	c.(1420-1422)Cac>Aac	p.H474N	CDH8_ENST00000299345.6_Missense_Mutation_p.H474N|CDH8_ENST00000584337.1_Missense_Mutation_p.H474N|CDH8_ENST00000577730.1_Missense_Mutation_p.H474N	NM_001796.4	NP_001787.2	P55286	CADH8_HUMAN	cadherin 8, type 2	474	Cadherin 4.				adherens junction organization|cell junction assembly|homophilic cell adhesion	integral to membrane|plasma membrane	calcium ion binding			biliary_tract(1)|breast(3)|cervix(1)|endometrium(7)|kidney(6)|large_intestine(22)|liver(2)|lung(49)|ovary(6)|pancreas(2)|prostate(5)|skin(4)|urinary_tract(4)	112		Ovarian(137;0.0799)|Melanoma(118;0.16)		UCEC - Uterine corpus endometrioid carcinoma (183;0.196)|Epithelial(162;0.0155)|all cancers(182;0.0305)|OV - Ovarian serous cystadenocarcinoma(108;0.0499)|BRCA - Breast invasive adenocarcinoma(181;0.249)		ATCTGACTGTGGTTCCCTATG	0.398000													14	117					6.31663e-08	6.52718e-08	1	1	0
FBXO3	26273	broad.mit.edu	37	11	33777500	33777500	+	Silent	SNP	C	C	T			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr11:33777500C>T	ENST00000530401.1	-	5	500	c.480G>A	c.(478-480)ctG>ctA	p.L160L	FBXO3_ENST00000534136.1_Silent_p.L165L|FBXO3_ENST00000526785.1_Silent_p.L52L|FBXO3_ENST00000448981.2_Silent_p.L165L|FBXO3_ENST00000265651.3_Silent_p.L165L			Q9UK99	FBX3_HUMAN	F-box protein 3	165					proteolysis	nucleus	ubiquitin-protein ligase activity			NS(1)|breast(2)|central_nervous_system(1)|haematopoietic_and_lymphoid_tissue(1)|kidney(1)|large_intestine(3)|lung(2)|pancreas(1)|stomach(1)	13		Lung NSC(402;0.0804)		BRCA - Breast invasive adenocarcinoma(625;0.00315)|Lung(977;0.00488)|LUSC - Lung squamous cell carcinoma(625;0.008)		AGTGATTAGACAGTGCCATGC	0.428000													3	24					0	0	1	0	0
LL22NC03-80A10.6	0	broad.mit.edu	37	22	22664141	22664141	+	RNA	SNP	G	G	A			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr22:22664141G>A	ENST00000426066.1	+	0	664					NR_027293.1																						AAATTTGAAGGTGCTGTGATT	0.448000													4	54					0	0	1	0	0
DYSF	8291	broad.mit.edu	37	2	71909724	71909724	+	Missense_Mutation	SNP	C	C	T			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr2:71909724C>T	ENST00000258104.3	+	54	6398	c.6121C>T	c.(6121-6123)Cgg>Tgg	p.R2041W	DYSF_ENST00000413539.2_Missense_Mutation_p.R2072W|DYSF_ENST00000409651.1_Missense_Mutation_p.R2073W|DYSF_ENST00000409582.3_Missense_Mutation_p.R2079W|DYSF_ENST00000429174.2_Missense_Mutation_p.R2062W|DYSF_ENST00000410041.1_Missense_Mutation_p.R2059W|DYSF_ENST00000479049.2_3'UTR|DYSF_ENST00000409366.1_Missense_Mutation_p.R2063W|DYSF_ENST00000410020.3_Missense_Mutation_p.R2080W|DYSF_ENST00000394120.2_Missense_Mutation_p.R2042W|DYSF_ENST00000409762.1_Missense_Mutation_p.R2058W|DYSF_ENST00000409744.1_Missense_Mutation_p.R2049W	NM_001130976.1|NM_003494.3	NP_001124448.1|NP_003485.1	O75923	DYSF_HUMAN	dysferlin	2041						cytoplasmic vesicle membrane|integral to membrane|sarcolemma	calcium-dependent phospholipid binding			autonomic_ganglia(2)|breast(3)|endometrium(5)|haematopoietic_and_lymphoid_tissue(1)|kidney(4)|large_intestine(22)|lung(57)|ovary(3)|pancreas(1)|prostate(2)|skin(6)|upper_aerodigestive_tract(3)|urinary_tract(2)	111						CATCCTGTGGCGGCGTTTCCG	0.582000													12	68					0	0	1	0	0
VWA2	340706	broad.mit.edu	37	10	116045953	116045953	+	Missense_Mutation	SNP	G	G	C	rs147199528		TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr10:116045953G>C	ENST00000603594.1	+	11	1574	c.1253G>C	c.(1252-1254)gGc>gCc	p.G418A	VWA2_ENST00000392982.3_Missense_Mutation_p.G418A	NM_001272046.1	NP_001258975.1	Q5GFL6	VWA2_HUMAN	von Willebrand factor A domain containing 2	418	VWFA 2.					extracellular region				central_nervous_system(1)|cervix(1)|endometrium(2)|haematopoietic_and_lymphoid_tissue(2)|kidney(2)|large_intestine(7)|lung(6)|ovary(2)|prostate(1)|skin(1)|stomach(1)	26				Epithelial(162;0.036)|all cancers(201;0.0793)		TTCCGTGGTGGCCCCACCCTG	0.672000													14	49					0	0	1	0	0
TMSB15A	11013	broad.mit.edu	37	X	101770045	101770045	+	Missense_Mutation	SNP	G	G	A			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chrX:101770045G>A	ENST00000289373.4	-	2	182	c.47C>T	c.(46-48)tCa>tTa	p.S16L		NM_021992.2	NP_068832.1	P0CG34	TB15A_HUMAN	thymosin beta 15a	16					actin cytoskeleton organization|sequestering of actin monomers	cytoplasm|cytoskeleton	actin binding			large_intestine(1)|lung(1)	2						CTTCAGTTTTGACCTGTCAAA	0.368000													9	79					0	0	1	0	0
IGKV2D-24	0	broad.mit.edu	37	2	90044429	90044429	+	RNA	SNP	C	C	T			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr2:90044429C>T	ENST00000462693.1	+	0	380																											ACGCAAGCTACACAATTTCCT	0.522000													17	90					0	0	1	0	0
CSPG4P5	0	broad.mit.edu	37	15	84957480	84957499	+	RNA	DEL	GGCCCCACATCCATTGAGAA	GGCCCCACATCCATTGAGAA	-			TCGA-DE-A4M8-01A-21D-A257-08	TCGA-DE-A4M8-10A-01D-A25A-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	21090199-d43b-4ef6-a376-cb3ca837a2e1	f49ebc02-7d89-4558-809e-5ae294a0559b	g.chr15:84957480_84957499delGGCCCCACATCCATTGAGAA	ENST00000558801.1	-	0	7230_7249																											TGTGTGCACTGGCCCCACATCCATTGAGAAGGCCCCACAT	0.586													2	4	---	---	---	---					
