Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_file	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	Genome_Change	Annotation_Transcript	Transcript_Strand	Transcript_Exon	Transcript_Position	cDNA_Change	Codon_Change	Protein_Change	Other_Transcripts	Refseq_mRNA_Id	Refseq_prot_Id	SwissProt_acc_Id	SwissProt_entry_Id	Description	UniProt_AApos	UniProt_Region	UniProt_Site	UniProt_Natural_Variations	UniProt_Experimental_Info	GO_Biological_Process	GO_Cellular_Component	GO_Molecular_Function	COSMIC_overlapping_mutations	COSMIC_fusion_genes	COSMIC_tissue_types_affected	COSMIC_total_alterations_in_gene	Tumorscape_Amplification_Peaks	Tumorscape_Deletion_Peaks	TCGAscape_Amplification_Peaks	TCGAscape_Deletion_Peaks	DrugBank	ref_context	gc_content	CCLE_ONCOMAP_overlapping_mutations	CCLE_ONCOMAP_total_mutations_in_gene	CGC_Mutation_Type	CGC_Translocation_Partner	CGC_Tumor_Types_Somatic	CGC_Tumor_Types_Germline	CGC_Other_Diseases	DNARepairGenes_Role	FamilialCancerDatabase_Syndromes	MUTSIG_Published_Results	OREGANNO_ID	OREGANNO_Values	t_alt_count	t_ref_count	validation_alt_allele	validation_method	validation_status	validation_tumor_sample	pox	qox	pox_cutoff	isArtifactMode	oxoGCut
MYH7	4625	broad.mit.edu	37	14	23898270	23898270	+	Missense_Mutation	SNP	C	C	T			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr14:23898270C>T	ENST00000355349.3	-	14	1463	c.1301G>A	c.(1300-1302)aGg>aAg	p.R434K		NM_000257.2	NP_000248.2	P12883	MYH7_HUMAN	myosin, heavy chain 7, cardiac muscle, beta	434	Myosin head-like.				adult heart development|muscle filament sliding|regulation of heart rate|ventricular cardiac muscle tissue morphogenesis	focal adhesion|muscle myosin complex|myosin filament|nucleus|sarcomere	actin binding|actin-dependent ATPase activity|ATP binding|calmodulin binding|microfilament motor activity|structural constituent of muscle			NS(3)|breast(4)|central_nervous_system(2)|cervix(2)|endometrium(14)|haematopoietic_and_lymphoid_tissue(3)|kidney(5)|large_intestine(19)|lung(57)|ovary(5)|prostate(9)|skin(5)|stomach(1)|upper_aerodigestive_tract(3)|urinary_tract(5)	137	all_cancers(95;2.54e-05)			GBM - Glioblastoma multiforme(265;0.00725)		GTTGAACATCCTCTCATACAC	0.542000													5	122					0	0	1	0	0
TTN	7273	broad.mit.edu	37	2	179428462	179428462	+	Missense_Mutation	SNP	G	G	T			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr2:179428462G>T	ENST00000589042.1	-	326	82621	c.82397C>A	c.(82396-82398)cCt>cAt	p.P27466H	TTN-AS1_ENST00000456053.1_RNA|TTN_ENST00000359218.5_Missense_Mutation_p.P18526H|TTN-AS1_ENST00000590932.1_RNA|TTN_ENST00000342992.6_Missense_Mutation_p.P24898H|TTN-AS1_ENST00000592600.1_RNA|TTN-AS1_ENST00000419746.1_RNA|TTN-AS1_ENST00000586707.1_RNA|TTN_ENST00000591111.1_Missense_Mutation_p.P25825H|TTN_ENST00000460472.2_Missense_Mutation_p.P18401H|TTN-AS1_ENST00000592630.1_RNA|TTN-AS1_ENST00000592689.1_RNA|TTN-AS1_ENST00000438095.1_RNA|TTN-AS1_ENST00000591332.1_RNA|TTN-AS1_ENST00000592750.1_RNA|TTN-AS1_ENST00000590807.1_RNA|TTN-AS1_ENST00000586831.1_RNA|TTN_ENST00000342175.6_Missense_Mutation_p.P18593H|TTN-AS1_ENST00000586452.1_RNA|TTN-AS1_ENST00000585451.1_RNA	NM_001267550.1	NP_001254479.1	Q8WZ42	TITIN_HUMAN	titin	25825							ATP binding|nucleic acid binding|protein serine/threonine kinase activity|protein tyrosine kinase activity			NS(24)|autonomic_ganglia(1)|breast(64)|central_nervous_system(14)|cervix(14)|endometrium(96)|haematopoietic_and_lymphoid_tissue(16)|kidney(91)|large_intestine(303)|liver(1)|lung(595)|ovary(58)|pancreas(17)|prostate(38)|skin(60)|stomach(29)|upper_aerodigestive_tract(1)|urinary_tract(26)	1448			OV - Ovarian serous cystadenocarcinoma(117;0.023)|Epithelial(96;0.0454)|all cancers(119;0.134)			TGGCTTATAAGGATTACAGGC	0.478000													7	95					0.00198382	0.00207829	1	1	0
PRMT8	56341	broad.mit.edu	37	12	3649791	3649791	+	Missense_Mutation	SNP	A	A	C			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr12:3649791A>C	ENST00000382622.3	+	2	485	c.95A>C	c.(94-96)cAg>cCg	p.Q32P	PRMT8_ENST00000452611.2_Missense_Mutation_p.Q23P|PRMT8_ENST00000261252.4_3'UTR	NM_019854.4	NP_062828.3	Q9NR22	ANM8_HUMAN	protein arginine methyltransferase 8	32					regulation of protein binding	cytoplasm|plasma membrane	histone-arginine N-methyltransferase activity|protein heterodimerization activity|protein homodimerization activity|protein-arginine omega-N asymmetric methyltransferase activity|protein-arginine omega-N monomethyltransferase activity			breast(1)|central_nervous_system(2)|endometrium(1)|kidney(1)|large_intestine(9)|lung(14)|ovary(3)|skin(5)|upper_aerodigestive_tract(1)	37			OV - Ovarian serous cystadenocarcinoma(31;0.0109)|COAD - Colon adenocarcinoma(12;0.0264)			CCCCCCTCCCAGCCCCCCCAG	0.652000													10	88					0	0	1	0	0
ATN1	1822	broad.mit.edu	37	12	7045127	7045127	+	Missense_Mutation	SNP	A	A	G	rs149811742		TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr12:7045127A>G	ENST00000356654.4	+	5	934	c.697A>G	c.(697-699)Atg>Gtg	p.M233V	ATN1_ENST00000396684.2_Missense_Mutation_p.M233V	NM_001007026.1	NP_001007027.1	P54259	ATN1_HUMAN	atrophin 1	233					cell death|central nervous system development	cytoplasm|nucleus	protein domain specific binding			breast(5)|central_nervous_system(1)|endometrium(3)|kidney(1)|large_intestine(4)|lung(15)|ovary(2)|pancreas(1)|prostate(1)|skin(4)|upper_aerodigestive_tract(1)|urinary_tract(2)	40						TGGACCCCCAATGGGTCCCAA	0.637000													11	32					0	0	1	0	0
CCNK	8812	broad.mit.edu	37	14	99976639	99976639	+	Silent	SNP	G	G	C			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr14:99976639G>C	ENST00000389879.5	+	11	1386	c.1263G>C	c.(1261-1263)ccG>ccC	p.P421P	CCNK_ENST00000555049.1_Intron	NM_001099402.1	NP_001092872.1	O75909	CCNK_HUMAN	cyclin K	421					cell division|mitosis|regulation of cyclin-dependent protein kinase activity|regulation of transcription, DNA-dependent|transcription from RNA polymerase II promoter		protein kinase binding			NS(1)|endometrium(2)|lung(3)	6		all_cancers(154;0.224)|all_epithelial(191;0.0643)|Melanoma(154;0.0866)				ACCGGCCCCCGCCCCCACCCC	0.682000													4	10					0	0	1	0	0
TTN	7273	broad.mit.edu	37	2	179449515	179449515	+	Missense_Mutation	SNP	G	G	A			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr2:179449515G>A	ENST00000589042.1	-	310	65077	c.64853C>T	c.(64852-64854)tCc>tTc	p.S21618F	TTN-AS1_ENST00000456053.1_RNA|TTN-AS1_ENST00000590743.1_RNA|TTN-AS1_ENST00000589907.1_RNA|TTN_ENST00000359218.5_Missense_Mutation_p.S12678F|TTN-AS1_ENST00000590932.1_RNA|TTN_ENST00000342992.6_Missense_Mutation_p.S19050F|TTN-AS1_ENST00000592600.1_RNA|TTN-AS1_ENST00000419746.1_RNA|TTN-AS1_ENST00000586707.1_RNA|TTN_ENST00000591111.1_Missense_Mutation_p.S19977F|TTN_ENST00000460472.2_Missense_Mutation_p.S12553F|TTN-AS1_ENST00000592630.1_RNA|TTN-AS1_ENST00000592689.1_RNA|TTN-AS1_ENST00000591332.1_RNA|TTN-AS1_ENST00000592750.1_RNA|TTN-AS1_ENST00000590807.1_RNA|TTN-AS1_ENST00000586831.1_RNA|TTN_ENST00000342175.6_Missense_Mutation_p.S12745F|TTN-AS1_ENST00000586452.1_RNA|TTN-AS1_ENST00000585451.1_RNA	NM_001267550.1	NP_001254479.1	Q8WZ42	TITIN_HUMAN	titin	19977	Fibronectin type-III 57.						ATP binding|nucleic acid binding|protein serine/threonine kinase activity|protein tyrosine kinase activity			NS(24)|autonomic_ganglia(1)|breast(64)|central_nervous_system(14)|cervix(14)|endometrium(96)|haematopoietic_and_lymphoid_tissue(16)|kidney(91)|large_intestine(303)|liver(1)|lung(595)|ovary(58)|pancreas(17)|prostate(38)|skin(60)|stomach(29)|upper_aerodigestive_tract(1)|urinary_tract(26)	1448			OV - Ovarian serous cystadenocarcinoma(117;0.023)|Epithelial(96;0.0454)|all cancers(119;0.134)			AACCCTGCAGGAAGTTTTTGT	0.507000													13	254					0	0	1	0	0
ANKRD45	339416	broad.mit.edu	37	1	173596291	173596291	+	Missense_Mutation	SNP	C	C	A			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr1:173596291C>A	ENST00000333279.2	-	4	564	c.504G>T	c.(502-504)agG>agT	p.R168S		NM_198493.2	NP_940895.1	Q5TZF3	ANR45_HUMAN	ankyrin repeat domain 45	184										NS(2)|endometrium(2)|large_intestine(4)|lung(3)|skin(1)	12						TCAGAGTCAGCCTTGCATCTG	0.428000													4	66					0.000602214	0.000662436	1	1	0
CYB5D1	124637	broad.mit.edu	37	17	7761479	7761479	+	Silent	SNP	G	G	A			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr17:7761479G>A	ENST00000332439.4	+	1	179	c.27G>A	c.(25-27)ggG>ggA	p.G9G	LSMD1_ENST00000576861.1_Intron|CYB5D1_ENST00000570446.1_Silent_p.G9G|LSMD1_ENST00000570555.1_Intron|CYB5D1_ENST00000571846.1_Silent_p.G9G	NM_144607.4	NP_653208.2	Q6P9G0	CB5D1_HUMAN	cytochrome b5 domain containing 1	9							heme binding			breast(1)|endometrium(1)|large_intestine(2)|skin(2)	6		all_cancers(10;0.11)|Prostate(122;0.219)				TGGTGGCTGGGCCAGACTTGG	0.582000													4	140					0	0	1	0	0
C1QL4	338761	broad.mit.edu	37	12	49730112	49730112	+	Missense_Mutation	SNP	G	G	T			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr12:49730112G>T	ENST00000334221.3	-	1	859	c.149C>A	c.(148-150)cCc>cAc	p.P50H		NM_001008223.1	NP_001008224.1	Q86Z23	C1QL4_HUMAN	complement component 1, q subcomponent-like 4	50						collagen				large_intestine(2)|lung(1)|ovary(1)|skin(1)	5						CGGGAAGGGGGGCACGGAAGC	0.751000													4	7					0.150653	0.150653	1	1	0
FYCO1	79443	broad.mit.edu	37	3	46009639	46009639	+	Missense_Mutation	SNP	G	G	A			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr3:46009639G>A	ENST00000296137.2	-	8	1392	c.1187C>T	c.(1186-1188)gCg>gTg	p.A396V	FYCO1_ENST00000535325.1_Missense_Mutation_p.A396V	NM_024513.3	NP_078789.2	Q9BQS8	FYCO1_HUMAN	FYVE and coiled-coil domain containing 1	396					transport	integral to membrane	metal ion binding|protein binding			NS(4)|breast(3)|central_nervous_system(1)|endometrium(11)|kidney(2)|large_intestine(9)|lung(17)|prostate(4)|skin(2)|upper_aerodigestive_tract(1)	54				BRCA - Breast invasive adenocarcinoma(193;0.00147)|KIRC - Kidney renal clear cell carcinoma(197;0.0272)|Kidney(197;0.0323)		CTCCTGGGCCGCATCACTGGG	0.567000													5	260					0	0	1	0	0
ALDH3B2	222	broad.mit.edu	37	11	67432919	67432919	+	Silent	SNP	G	G	A			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr11:67432919G>A	ENST00000349015.3	-	7	981	c.543C>T	c.(541-543)ccC>ccT	p.P181P	ALDH3B2_ENST00000530069.1_Silent_p.P181P	NM_000695.3	NP_000686.2	P48448	AL3B2_HUMAN	aldehyde dehydrogenase 3 family, member B2	181					alcohol metabolic process|cellular aldehyde metabolic process|lipid metabolic process		3-chloroallyl aldehyde dehydrogenase activity|aldehyde dehydrogenase			central_nervous_system(1)|endometrium(3)|kidney(2)|large_intestine(3)|lung(5)|prostate(2)|stomach(1)|urinary_tract(1)	18					NADH(DB00157)	TCTGCAGGGCGGGCAGCAGCC	0.642000													4	138					0	0	1	0	0
PCLO	27445	broad.mit.edu	37	7	82784471	82784471	+	Missense_Mutation	SNP	A	A	G			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr7:82784471A>G	ENST00000423517.2	-	2	1823	c.1486T>C	c.(1486-1488)Tca>Cca	p.S496P	PCLO_ENST00000333891.8_Missense_Mutation_p.S496P	NM_014510.2	NP_055325.2	Q9Y6V0	PCLO_HUMAN	piccolo presynaptic cytomatrix protein	442	10 X 10 AA tandem approximate repeats of P-A-K-P-Q-P-Q-Q-P-X.|Gln-rich.|Pro-rich.				cytoskeleton organization|synaptic vesicle exocytosis	cell junction|cytoskeleton|synaptic vesicle	calcium ion binding|calcium-dependent phospholipid binding|profilin binding|transporter activity	p.S496P(6)|p.?(3)		breast(3)|central_nervous_system(3)|cervix(5)|endometrium(19)|haematopoietic_and_lymphoid_tissue(3)|kidney(19)|large_intestine(35)|lung(145)|ovary(7)|prostate(4)|upper_aerodigestive_tract(14)|urinary_tract(2)	259						GGCTTTGCTGAGCCAGGCTGT	0.607000													8	244					0	0	1	0	0
KCTD9	54793	broad.mit.edu	37	8	25296836	25296836	+	Missense_Mutation	SNP	C	C	G			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr8:25296836C>G	ENST00000221200.4	-	6	678	c.458G>C	c.(457-459)cGt>cCt	p.R153P		NM_017634.3	NP_060104.2	Q7L273	KCTD9_HUMAN	potassium channel tetramerization domain containing 9	153	BTB.					voltage-gated potassium channel complex	voltage-gated potassium channel activity			breast(1)|endometrium(2)|large_intestine(1)|lung(6)|pancreas(1)|prostate(1)	12		all_cancers(63;0.0164)|Ovarian(32;0.000878)|all_epithelial(46;0.00542)|Breast(100;0.0164)|Hepatocellular(4;0.114)|Prostate(55;0.191)		UCEC - Uterine corpus endometrioid carcinoma (27;0.0219)|Epithelial(17;2.39e-12)|Colorectal(74;0.0129)|COAD - Colon adenocarcinoma(73;0.0438)		CTGTCCATGACGCAAGTAGTT	0.353000													4	24					0	0	1	0	0
NOTCH2	4853	broad.mit.edu	37	1	120612003	120612004	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr1:120612003_120612004delGG	ENST00000256646.2	-	1	236_237	c.17_18delCC	c.(16-18)cfs	p.P6fs		NM_024408.3	NP_077719.2	Q04721	NOTC2_HUMAN	notch 2	6					anti-apoptosis|bone remodeling|cell cycle arrest|cell fate determination|cell growth|hemopoiesis|induction of apoptosis|negative regulation of cell proliferation|nervous system development|Notch receptor processing|Notch signaling pathway|organ morphogenesis|positive regulation of Ras protein signal transduction|regulation of transcription, DNA-dependent|stem cell maintenance|transcription, DNA-dependent	cell surface|cytosol|endoplasmic reticulum lumen|extracellular region|Golgi lumen|integral to plasma membrane|nucleoplasm	calcium ion binding|ligand-regulated transcription factor activity|protein binding|receptor activity	p.P6fs*27(2)		breast(4)|central_nervous_system(6)|cervix(1)|endometrium(8)|haematopoietic_and_lymphoid_tissue(9)|kidney(9)|large_intestine(19)|liver(1)|lung(57)|ovary(4)|pancreas(1)|prostate(7)|skin(24)|stomach(2)|upper_aerodigestive_tract(5)|urinary_tract(1)	158	all_neural(166;0.153)	all_lung(203;1.96e-06)|Lung NSC(69;1.47e-05)|all_epithelial(167;0.000809)		Lung(183;0.0242)|LUSC - Lung squamous cell carcinoma(189;0.133)		ACAGCAGAGCGGGGCGCAGGGC	0.762			"""N, F, Mis"""		"""marginal zone lymphoma, DLBCL"""				Alagille Syndrome				9	33	---	---	---	---					
BTN2A3P	0	broad.mit.edu	37	6	26422388	26422390	+	RNA	DEL	CCT	CCT	-	rs113134648		TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr6:26422388_26422390delCCT	ENST00000466808.2	+	0	42_44																											GGCCAGCCTCCCTCCTCCTCCTC	0.586													7	179	---	---	---	---					
SKIDA1	387640	broad.mit.edu	37	10	21805466	21805467	+	In_Frame_Ins	INS	-	-	CCTCCT	rs138084841	by1000genomes	TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr10:21805466_21805467insCCTCCT	ENST00000449193.2	-	4	3537_3538	c.1285_1286insAGGAGG	c.(1285-1287)ggg>AGGAGGggg	p.428_429insRR	SKIDA1_ENST00000444772.3_In_Frame_Ins_p.349_350insRR	NM_207371.3	NP_997254.3			SKI/DACH domain containing 1									p.E428_G429insEE(2)									CCCGCTGCccccctcctcctcc	0.619													7	4	---	---	---	---					
EP400	57634	broad.mit.edu	37	12	132547093	132547094	+	In_Frame_Ins	INS	-	-	CAG	rs113304321	by1000genomes	TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr12:132547093_132547094insCAG	ENST00000333577.4	+	48	8398_8399	c.8289_8290insCAG	c.(8287-8292)caagca>caCAGagca	p.2763_2763Q>HR	EP400_ENST00000330386.6_In_Frame_Ins_p.2646_2646Q>HR|EP400_ENST00000332482.4_In_Frame_Ins_p.2690_2690Q>HR|EP400_ENST00000389561.2_In_Frame_Ins_p.2727_2727Q>HR|EP400_ENST00000389562.2_In_Frame_Ins_p.2726_2726Q>HR			Q96L91	EP400_HUMAN	E1A binding protein p400	2763	Interaction with ZNF42 (By similarity).|Poly-Gln.				histone H2A acetylation|histone H4 acetylation|regulation of transcription, DNA-dependent	NuA4 histone acetyltransferase complex|nuclear speck	ATP binding|DNA binding|helicase activity	p.Q2726Q(9)		NS(1)|breast(6)|central_nervous_system(10)|cervix(1)|endometrium(21)|kidney(13)|large_intestine(25)|lung(56)|ovary(5)|prostate(8)|skin(6)|stomach(4)|upper_aerodigestive_tract(2)|urinary_tract(3)	161	all_neural(191;0.0982)|Medulloblastoma(191;0.163)	all_epithelial(31;0.198)		OV - Ovarian serous cystadenocarcinoma(86;3.01e-08)|Epithelial(86;3.43e-07)|all cancers(50;2.01e-06)		agcagcaacaacagcagcagca	0.564													11	62	---	---	---	---					
MAP3K9	4293	broad.mit.edu	37	14	71275774	71275776	+	In_Frame_Del	DEL	CCT	CCT	-	rs3832971		TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chr14:71275774_71275776delCCT	ENST00000554752.2	-	1	112_114	c.113_115delAGG	c.(112-117)gcg>g	p.EA38del	MAP3K9_ENST00000555993.2_In_Frame_Del_p.EA38del|MAP3K9_ENST00000381250.4_In_Frame_Del_p.EA38del			P80192	M3K9_HUMAN	mitogen-activated protein kinase kinase kinase 9	38	Ala-rich.|Poly-Glu.				activation of JUN kinase activity|protein autophosphorylation		ATP binding|JUN kinase kinase kinase activity|MAP kinase kinase activity|protein homodimerization activity	p.E38delE(1)		breast(1)|central_nervous_system(3)|cervix(1)|endometrium(1)|kidney(2)|large_intestine(5)|lung(25)|ovary(2)|prostate(1)|skin(3)|stomach(2)	46				all cancers(60;0.00779)|BRCA - Breast invasive adenocarcinoma(234;0.00884)|OV - Ovarian serous cystadenocarcinoma(108;0.08)		GCCGCCGCCGcctcctcctcctc	0.773													4	5	---	---	---	---					
ZMYM3	9203	broad.mit.edu	37	X	70466321	70466321	+	Frame_Shift_Del	DEL	A	A	-			TCGA-EL-A3ZS-01A-12D-A23M-08	TCGA-EL-A3ZS-11A-11D-A23K-08								Untested	Somatic	Phase_I	WXS	none			Illumina GAIIx	c91019ef-9b12-40b6-bb84-8693ba5b2300	91cf9886-bdae-4fa5-b416-19840973079d	g.chrX:70466321delA	ENST00000373998.1	-	15	3115	c.2418delT	c.(2416-2418)ccfs	p.P812fs	ZMYM3_ENST00000314425.5_Frame_Shift_Del_p.P824fs|ZMYM3_ENST00000353904.2_Frame_Shift_Del_p.P824fs|ZMYM3_ENST00000373988.1_Frame_Shift_Del_p.P826fs|ZMYM3_ENST00000373984.3_Frame_Shift_Del_p.P826fs|ZMYM3_ENST00000489332.1_5'UTR	NM_001171162.1	NP_001164633.1	Q14202	ZMYM3_HUMAN	zinc finger, MYM-type 3	824					multicellular organismal development	nucleus	DNA binding|zinc ion binding			breast(1)|central_nervous_system(7)|endometrium(11)|haematopoietic_and_lymphoid_tissue(2)|kidney(2)|large_intestine(12)|lung(17)|ovary(1)|prostate(9)|upper_aerodigestive_tract(1)|urinary_tract(1)	64	Renal(35;0.156)					GTGGGGGTGGAGGGGTGGGAG	0.577													2	4	---	---	---	---					
