Unique Name Descriptor Wide Peak Limits Peak Limits Region Limits q values Residual q values after removing segments shared with higher peaks Broad or Focal Amplitude Threshold CPT0001020005 CPT0007740009 CPT0008330006 CPT0010050006 CPT0023470005 CPT0024970009 CPT0063430009 CPT0063480009 CPT0064040006 CPT0068280006 CPT0069890006 CPT0079050009 CPT0079100009 CPT0082970010 CPT0083980006 CPT0086260009 CPT0087190009 CPT0089880009 CPT0090440009 CPT0091050009 CPT0091610009 CPT0091820009 CPT0098770009 CPT0101130009 CPT0102790009 CPT0104360011 CPT0104930009 CPT0105420009 CPT0108560009 CPT0111150015 CPT0112540009 CPT0112580006 CPT0112650009 CPT0112720006 CPT0115830009 CPT0117720009 CPT0123350009 CPT0126390006 CPT0126450006 CPT0126530006 CPT0126670006 CPT0126740006 CPT0126810006 CPT0128890006 CPT0130030009 CPT0130270009 CPT0130410009 CPT0136640009 CPT0146380010 CPT0146480010 CPT0147180010 CPT0147680010 CPT0175120006 CPT0175260006 CPT0175390006 CPT0175560006 CPT0183250007 CPT0186130006 CPT0186180006 CPT0187370006 CPT0190550006 CPT0191710006 CPT0191860006 CPT0192540007 CPT0195510009 CPT0196810009 CPT0197090009 CPT0197150009 CPT0197210006 CPT0197480006 CPT0197740006 CPT0202020011 CPT0202170006 CPT0202350007 CPT0202530007 CPT0202720006 CPT0204600010 CPT0204800006 CPT0204990006 CPT0207210006 CPT0208770006 CPT0209020007 CPT0209490006 CPT0217420006 CPT0218280006 CPT0219360006 CPT0221200006 CPT0221650006 CPT0222730006 CPT0223790006 CPT0225380006 CPT0227020006 CPT0227400006 CPT0232670006 CPT0233120006 CPT0233320006 CPT0233600006 CPT0234560006 CPT0234790006 CPT0234930007 CPT0236420006 CPT0237060007 CPT0237200007 CPT0237410007 CPT0237550010 CPT0237690007 CPT0237760006 CPT0237970010 CPT0238110010 CPT0241170006 CPT0245780006 CPT0245830006 CPT0245880006 Amplification Peak 1 1q21.2 chr1:119987105-154781648(probes 9773:10204) chr1:150513490-150629038(probes 9822:9830) chr1:119996646-154801163(probes 9774:10206) 0.0033068 0.0033068 0: t<0.1; 1: 0.10.9 1 1 1 0 0 1 0 0 0 0 1 0 0 0 1 0 2 0 0 1 1 0 1 1 1 0 1 0 1 2 2 0 1 0 1 0 1 1 1 2 1 0 0 1 1 1 1 0 0 1 0 0 0 0 1 0 0 1 0 1 0 1 1 0 1 1 0 0 0 1 0 0 0 1 1 1 0 2 1 1 0 1 0 1 1 1 1 2 1 0 0 1 1 0 1 1 1 1 0 0 0 0 1 1 1 1 2 2 0 0 0 0 1 Amplification Peak 2 2p15 chr2:3758129-88535405(probes 18142:23729) chr2:58241336-61825826(probes 21844:21982) chr2:58241336-61838516(probes 21844:21985) 0.15085 0.15085 0: t<0.1; 1: 0.10.9 1 0 1 1 0 0 0 0 1 0 1 0 0 0 2 0 2 0 1 1 1 0 2 1 2 1 1 0 1 1 2 0 1 1 2 0 1 1 1 0 0 0 0 1 1 1 1 1 1 1 0 1 1 0 1 1 1 1 0 0 1 0 1 1 0 1 0 1 0 0 1 0 0 1 1 1 1 0 0 1 0 1 1 1 1 1 1 1 1 1 1 1 0 0 1 0 1 1 1 0 1 0 1 1 1 1 1 1 0 1 1 1 0 Amplification Peak 3 3q26.33 chr3:180967222-184187340(probes 46299:46367) chr3:180989795-182820237(probes 46302:46303) chr3:118550945-198295559(probes 42402:47240) 3.235e-48 4.385e-24 0: t<0.1; 1: 0.10.9 2 0 1 1 2 1 1 1 2 2 2 1 0 0 2 1 2 0 1 1 1 1 2 1 2 1 1 0 1 2 2 1 1 1 2 1 1 2 1 1 1 1 2 2 1 2 2 1 1 2 1 2 2 0 2 0 0 2 0 0 1 1 1 0 2 2 1 1 1 1 0 1 0 2 2 2 1 2 1 2 2 2 2 1 1 2 1 0 2 2 2 1 1 1 2 2 2 2 2 2 1 0 1 2 2 2 2 2 1 1 1 1 2 Amplification Peak 4 3q27.1 chr3:180983690-184187340(probes 46301:46367) chr3:183162678-184177455(probes 46343:46366) chr3:118550945-198295559(probes 42402:47240) 4.1592e-49 2.7779e-11 0: t<0.1; 1: 0.10.9 2 0 1 1 2 1 1 1 2 2 2 1 0 0 2 1 2 0 1 1 1 1 2 1 2 2 1 0 1 2 2 1 1 1 2 1 1 2 1 1 1 1 2 2 1 2 2 1 1 2 1 2 2 0 2 0 0 2 0 0 2 1 1 0 2 2 1 1 1 1 0 1 0 2 2 2 1 2 1 2 2 2 2 1 1 2 1 0 2 2 2 2 1 1 2 2 2 2 1 2 1 0 1 2 2 2 2 1 1 1 1 1 2 Amplification Peak 5 4q12 chr4:53490283-56815900(probes 50163:50365) chr4:55125316-55831342(probes 50273:50302) chr4:51877877-61524726(probes 50047:50393) 0.0016037 0.0016037 0: t<0.1; 1: 0.10.9 1 0 0 1 0 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 2 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 1 0 0 0 0 0 0 0 1 0 1 0 0 1 0 1 2 0 0 0 0 0 0 Amplification Peak 6 5p15.2 chr5:7899893-16077395(probes 60628:60962) chr5:11732295-14581872(probes 60861:60944) chr5:6656202-21871708(probes 60571:61395) 0.00098104 0.00098104 0: t<0.1; 1: 0.10.9 2 1 1 1 1 1 1 2 1 2 2 1 1 1 1 0 0 0 1 1 2 2 2 1 2 1 0 0 2 0 1 1 1 2 1 1 1 1 1 0 1 2 1 1 1 1 2 1 1 1 2 2 2 0 1 1 1 1 1 0 1 0 2 1 1 1 1 1 1 1 1 2 0 0 1 1 1 2 0 1 1 1 1 1 1 2 1 0 1 2 0 2 1 0 1 1 1 1 1 2 1 1 1 0 1 1 1 1 0 2 1 1 1 Amplification Peak 7 6p21.1 chr6:40423168-61681081(probes 76646:77846) chr6:41638848-42048480(probes 76693:76721) chr6:41350887-42077726(probes 76678:76724) 0.17557 0.17557 0: t<0.1; 1: 0.10.9 0 0 0 0 0 1 0 1 1 1 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 2 1 0 1 1 2 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 2 0 2 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 1 1 0 1 1 0 1 0 1 1 1 0 1 0 1 0 1 2 0 0 0 0 0 0 0 Amplification Peak 8 7p11.2 chr7:53035651-55375829(probes 89605:89671) chr7:53036585-55366003(probes 89606:89670) chr7:53036585-55825286(probes 89606:89699) 0.0077632 0.010039 0: t<0.1; 1: 0.10.9 1 0 1 1 0 0 0 0 0 1 1 1 0 1 1 0 1 1 1 0 0 0 1 1 0 0 1 0 0 1 0 1 1 1 1 1 0 0 1 0 0 2 0 0 1 0 1 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 1 1 0 1 1 0 0 1 1 0 1 0 2 1 1 0 1 0 1 1 2 1 0 1 0 0 1 0 0 0 0 0 1 0 1 2 1 0 0 0 1 1 0 1 1 1 0 0 0 2 1 Amplification Peak 9 7q31.1 chr7:90403968-110896494(probes 91312:92685) chr7:107475385-109959603(probes 92563:92680) chr7:90413434-110663742(probes 91313:92683) 0.017189 0.019776 0: t<0.1; 1: 0.10.9 1 0 1 1 0 0 0 1 0 0 1 1 0 0 0 0 2 0 0 0 0 0 2 1 1 0 1 0 0 1 0 0 1 2 0 1 0 0 0 1 0 2 0 0 1 1 1 1 0 1 0 2 0 0 1 0 1 1 0 0 0 0 0 1 0 1 0 1 0 1 0 0 1 0 0 1 0 0 1 1 1 1 0 1 0 1 0 0 1 0 0 0 0 0 1 0 1 0 1 1 1 0 0 0 0 0 1 1 0 0 0 0 1 Amplification Peak 10 8p11.23 chr8:38281446-38522237(probes 98141:98158) chr8:38305468-38512364(probes 98146:98157) chr8:33597538-46842371(probes 98026:98439) 3.5641e-29 3.5641e-29 0: t<0.1; 1: 0.10.9 1 0 0 0 0 0 0 0 0 2 0 0 0 0 2 2 2 0 1 0 0 2 2 2 2 2 0 2 0 0 0 0 0 2 0 2 2 1 0 2 0 2 0 0 1 1 0 0 2 1 0 1 0 0 0 0 1 0 0 2 2 2 2 1 1 2 2 1 2 0 1 0 0 0 1 2 0 0 1 0 1 1 0 0 2 1 1 0 2 0 1 1 2 0 0 0 0 1 2 2 2 0 0 1 2 2 2 1 2 0 1 1 2 Amplification Peak 11 8q24.21 chr8:125426703-133306419(probes 104292:104664) chr8:126557412-129748478(probes 104295:104368) chr8:90005390-145138636(probes 101518:105252) 1.7771e-06 1.7771e-06 0: t<0.1; 1: 0.10.9 1 0 1 1 1 1 0 2 0 1 0 1 1 1 2 1 2 0 1 0 1 1 1 1 1 1 1 1 1 1 0 1 1 2 1 1 2 2 0 2 1 0 0 0 1 2 1 1 2 1 1 2 1 0 0 0 1 0 0 0 1 1 1 1 1 1 1 1 1 1 0 0 0 1 1 1 1 0 1 2 2 1 0 1 0 1 2 1 1 0 1 1 0 0 1 1 0 1 1 1 1 0 0 1 1 1 2 1 1 1 1 1 1 Amplification Peak 12 9p13.3 chr9:35554106-36849553(probes 106685:106781) chr9:35870424-36052242(probes 106723:106729) chr9:32635602-68452788(probes 106431:106966) 0.00057929 0.00057929 0: t<0.1; 1: 0.10.9 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 2 0 0 1 0 0 0 0 1 0 0 1 0 1 0 2 0 1 0 0 0 0 0 0 1 0 1 2 0 0 2 0 1 0 0 1 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 2 0 0 1 0 1 0 1 0 1 1 0 0 0 0 1 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 Amplification Peak 13 11q13.3 chr11:70116343-70661788(probes 127381:127424) chr11:70153149-70283934(probes 127387:127399) chr11:68449093-77305239(probes 127261:127991) 3.8211e-19 3.8211e-19 0: t<0.1; 1: 0.10.9 2 0 0 0 0 0 0 0 0 0 0 0 2 1 2 0 2 1 1 0 1 0 0 1 0 0 0 0 2 0 1 0 0 1 0 1 1 0 0 2 2 0 0 0 2 2 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 1 1 0 0 2 1 0 1 2 0 1 0 0 0 2 0 0 2 2 2 0 0 1 1 0 0 1 1 1 0 0 1 0 1 1 0 2 2 0 0 2 1 0 0 Amplification Peak 14 12p12.1 chr12:24583598-25513591(probes 133708:133730) chr12:25089813-25503737(probes 133713:133729) chr12:24584142-27991853(probes 133709:133941) 0.00068669 0.00068669 0: t<0.1; 1: 0.10.9 1 1 0 0 0 0 0 0 0 1 1 1 0 1 1 0 2 1 1 0 0 1 1 1 0 0 2 0 0 1 0 0 1 1 1 1 1 0 1 2 1 0 0 0 1 2 1 1 0 1 1 0 0 0 1 0 1 0 0 2 0 1 1 0 1 1 1 1 0 0 0 0 0 0 1 0 0 0 1 2 1 1 2 1 0 1 1 0 0 0 1 0 1 0 1 2 1 1 1 0 1 0 0 2 2 1 0 1 1 2 0 1 0 Amplification Peak 15 12q15 chr12:68846781-70533883(probes 136732:136877) chr12:69390339-69958423(probes 136788:136828) chr12:68856702-70552752(probes 136733:136879) 0.027938 0.027938 0: t<0.1; 1: 0.10.9 0 0 2 0 0 0 0 0 1 2 1 1 0 1 1 0 1 0 0 0 0 0 1 1 1 0 0 0 0 0 1 0 0 1 1 1 0 0 1 0 1 0 0 0 1 0 2 2 0 1 2 0 1 0 1 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 1 0 1 1 1 0 1 0 1 1 1 0 0 0 0 2 0 1 1 0 0 2 0 1 1 Amplification Peak 16 13q34 chr13:112559636-114364328(probes 147211:147299) chr13:112683403-113433719(probes 147214:147256) chr13:112068637-114364328(probes 147191:147299) 0.013177 0.013177 0: t<0.1; 1: 0.10.9 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 2 2 0 0 0 1 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 2 1 0 0 0 1 0 0 2 0 0 0 0 0 0 0 0 0 Amplification Peak 17 14q13.3 chr14:33940969-38218702(probes 148133:148425) chr14:36734596-37812291(probes 148323:148419) chr14:36491312-38237373(probes 148299:148427) 0.1129 0.1129 0: t<0.1; 1: 0.10.9 1 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 1 0 0 0 1 2 0 0 0 1 1 0 0 1 0 0 0 2 0 0 0 0 0 0 0 2 0 1 0 1 0 0 0 0 0 1 0 1 1 1 0 1 0 1 1 0 1 0 1 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 1 1 0 0 0 0 1 1 0 1 0 0 0 1 1 0 0 0 0 1 1 0 1 1 0 1 0 1 1 0 Amplification Peak 18 15q26.3 chr15:83010906-101991189(probes 158092:159423) chr15:98969672-99105178(probes 159262:159263) chr15:98969672-99130344(probes 159262:159266) 0.20028 0.20028 0: t<0.1; 1: 0.10.9 0 0 0 0 0 0 0 2 0 0 0 0 1 0 2 0 0 0 1 0 0 0 1 0 0 1 1 0 1 0 1 0 1 1 1 0 1 0 0 1 2 1 0 0 1 0 1 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 0 0 1 0 1 0 0 1 0 1 0 0 0 0 0 Amplification Peak 19 17q23.3 chr17:61858062-83257441(probes 168377:169933) chr17:64329744-64551561(probes 168632:168641) chr17:64329744-64581311(probes 168632:168644) 0.20936 0.20936 0: t<0.1; 1: 0.10.9 1 0 1 1 0 0 0 0 0 1 1 1 1 0 1 1 2 0 1 1 0 0 1 1 1 1 1 1 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 1 1 1 1 0 0 1 0 1 0 0 1 0 0 1 0 0 1 0 0 1 0 2 0 1 0 1 0 2 0 0 1 1 0 1 0 1 0 0 0 0 0 1 1 0 1 2 1 0 0 0 0 0 1 0 1 0 0 0 0 1 1 1 1 1 0 1 0 0 1 Amplification Peak 20 18q11.2 chr18:21654812-32470449(probes 170858:171295) chr18:24468974-25089442(probes 171041:171042) chr18:24468974-25203282(probes 171041:171045) 0.11965 0.11965 0: t<0.1; 1: 0.10.9 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 2 0 1 0 0 0 0 0 1 0 0 2 1 1 0 0 0 1 1 1 1 0 0 2 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 1 0 0 2 0 1 1 1 0 0 1 0 0 1 1 0 0 1 1 1 2 2 0 0 0 0 1 1 Amplification Peak 21 19q13.13 chr19:36569686-39278560(probes 176857:177118) chr19:37887911-38164456(probes 176986:177012) chr19:23866186-41267174(probes 176273:177308) 4.3248e-07 4.3248e-07 0: t<0.1; 1: 0.10.9 1 0 1 1 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 1 1 0 1 0 1 0 1 0 1 1 0 0 0 2 1 2 1 0 0 2 1 2 0 0 1 0 0 1 0 1 0 0 0 1 1 1 0 0 0 1 0 1 0 0 1 1 0 0 1 0 1 1 1 2 0 1 1 0 0 2 0 2 0 0 0 1 1 0 1 0 0 0 0 1 1 1 2 1 0 1 1 1 0 Amplification Peak 22 20q11.21 chr20:31259439-34855164(probes 180356:180681) chr20:32084566-32215246(probes 180435:180448) chr20:31259655-35321070(probes 180357:180729) 0.0087196 0.0087196 0: t<0.1; 1: 0.10.9 1 0 1 1 1 1 0 2 1 1 0 0 2 0 1 0 0 0 1 1 1 1 1 2 1 0 1 0 1 1 1 1 1 2 1 1 1 0 0 2 2 0 0 0 1 0 1 1 0 1 1 0 0 0 1 1 1 1 0 0 1 0 1 0 0 1 0 1 0 1 1 0 0 0 1 1 0 1 0 0 1 2 0 1 1 2 1 0 2 1 0 1 1 0 1 2 1 1 1 2 1 0 0 1 1 1 1 1 1 1 1 1 0 Deletion Peak 1 1p36.23 chr1:1-149930424(probes 1:9775) chr1:8340014-8889553(probes 484:519) chr1:8361899-8889553(probes 488:519) 0.058847 0.19437 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 1 0 0 1 1 0 1 0 0 0 1 1 1 0 0 1 0 0 0 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 1 0 1 0 1 0 0 0 1 1 1 0 0 0 0 0 1 0 0 0 1 0 1 1 1 1 1 0 1 1 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 1 1 0 0 0 0 0 Deletion Peak 2 1p13.2 chr1:100520352-149930424(probes 8597:9775) chr1:112481155-112538870(probes 9214:9217) chr1:77875087-149940299(probes 6549:9776) 5.765e-06 0.00043896 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 0 0 0 1 0 0 0 1 1 1 0 0 1 0 0 0 0 1 0 0 0 1 1 1 1 1 0 1 1 0 0 1 1 1 1 1 1 0 1 0 0 1 0 1 0 1 1 1 1 0 1 0 1 0 0 1 0 1 1 1 0 1 1 1 1 0 0 0 0 0 0 1 1 0 0 1 0 0 0 1 1 0 0 1 1 1 1 1 0 0 0 0 0 0 0 1 1 0 1 0 1 0 1 1 1 1 0 0 1 0 0 Deletion Peak 3 2q36.1 chr2:212419409-242193529(probes 32641:34806) chr2:218764538-224418243(probes 33151:33434) chr2:209730420-242193529(probes 32396:34806) 0.00018825 0.00018825 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 0 1 0 1 0 1 0 0 0 0 0 1 0 1 1 0 1 1 1 0 1 0 1 1 Deletion Peak 4 3p24.1 chr3:27833851-28368392(probes 36810:36862) chr3:28223445-28368392(probes 36849:36862) chr3:28263403-28319225(probes 36853:36854) 0.017163 0.056628 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 1 0 1 1 1 1 1 0 1 1 1 1 0 0 1 1 1 1 0 1 1 0 1 1 1 1 0 0 0 0 0 1 1 1 1 0 1 1 1 1 1 0 0 1 1 1 1 1 1 0 1 0 1 1 1 1 0 1 0 1 1 1 0 0 1 0 0 1 0 1 1 1 1 1 1 0 1 1 1 1 1 1 1 0 0 1 1 1 1 0 1 0 1 0 1 1 1 0 0 1 1 1 0 1 1 1 1 1 1 Deletion Peak 5 3p12.1 chr3:79125560-86954382(probes 40907:40962) chr3:81761355-86954382(probes 40932:40962) chr3:44646548-94044428(probes 38031:41099) 1.2875e-07 1.0285e-06 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 1 0 1 1 1 1 1 0 0 0 0 1 0 0 1 1 1 1 0 1 1 1 1 1 1 1 1 0 0 1 0 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 0 1 0 1 1 1 1 0 1 0 0 0 1 0 1 0 0 0 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 0 1 1 1 0 1 1 1 0 0 1 1 0 1 1 0 1 1 1 1 Deletion Peak 6 4p14 chr4:31123269-36258126(probes 49180:49205) chr4:31133070-36258126(probes 49181:49205) chr4:1-42599040(probes 47241:49765) 5.8292e-05 5.8743e-05 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 0 1 0 0 1 1 0 1 0 1 0 1 0 0 1 1 0 1 1 1 0 1 1 1 1 1 0 1 0 1 0 0 0 1 0 0 1 1 1 0 1 1 0 1 1 0 1 1 0 1 0 0 1 1 0 1 1 0 1 1 1 0 1 0 0 0 1 0 0 1 0 0 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 0 1 0 1 0 1 0 1 0 1 1 1 1 1 1 0 1 0 0 0 Deletion Peak 7 4q13.3 chr4:57091204-190214555(probes 50389:60250) chr4:70158923-70353466(probes 50685:50703) chr4:70197253-70211791(probes 50688:50689) 0.032985 0.18198 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 0 0 1 0 0 1 1 1 1 0 0 0 1 0 0 1 1 0 0 0 1 0 1 1 0 1 1 0 0 0 0 1 1 0 0 1 0 0 1 1 1 1 0 0 1 1 0 1 1 0 0 0 0 1 1 1 0 1 0 1 0 1 0 1 0 0 1 1 0 0 0 0 0 0 1 1 1 1 1 1 1 1 1 1 0 0 1 1 0 0 1 0 1 0 0 1 1 0 1 0 1 0 1 1 0 1 0 1 0 Deletion Peak 8 4q35.2 chr4:169701596-190214555(probes 58970:60250) chr4:186456231-190214555(probes 60235:60250) chr4:92590309-190214555(probes 52499:60250) 4.5633e-06 0.00018825 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 1 0 1 1 1 1 0 1 1 1 1 0 1 0 1 0 0 1 1 0 0 1 1 0 1 1 1 1 1 0 1 1 1 1 1 0 0 1 1 0 1 1 1 1 1 0 1 1 0 1 1 0 1 0 0 1 1 1 0 1 0 0 0 1 1 1 0 0 1 1 0 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 1 0 0 0 0 1 1 0 1 1 1 1 1 1 0 1 1 1 1 Deletion Peak 9 5q15 chr5:44388705-181538259(probes 62332:73597) chr5:94598877-94708799(probes 65826:65836) chr5:83539985-96824006(probes 64759:66048) 0.044031 0.044031 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 0 1 1 1 1 1 1 0 1 1 1 0 1 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 0 1 0 0 0 0 1 0 1 1 0 1 0 1 1 1 0 1 0 0 1 1 1 0 1 1 0 0 1 0 0 1 0 1 1 0 1 1 1 1 0 1 1 1 1 1 0 0 1 1 0 1 1 1 0 1 1 1 0 1 1 0 1 0 1 1 1 1 1 1 Deletion Peak 10 6q16.1 chr6:96211270-96808369(probes 79651:79693) chr6:96551817-96808369(probes 79689:79693) chr6:96609694-96808369(probes 79692:79693) 0.00033539 0.00032456 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 1 1 1 1 1 0 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 1 1 1 0 1 0 0 0 1 0 0 Deletion Peak 11 7q36.3 chr7:108566078-159345973(probes 92649:96058) chr7:156936273-159345973(probes 95922:96058) chr7:156833815-159345973(probes 95911:96058) 0.2194 0.22147 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 Deletion Peak 12 8p21.3 chr8:1-28026172(probes 96059:97681) chr8:22817616-22930006(probes 97243:97244) chr8:1-37844037(probes 96059:98102) 1.0751e-18 1.0751e-18 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 1 0 0 1 0 0 1 1 1 1 1 1 1 1 0 0 1 1 1 1 0 1 1 1 1 1 0 1 0 0 0 1 1 0 1 1 1 1 1 1 1 0 1 1 1 0 1 1 1 0 0 0 0 1 1 1 1 1 1 0 1 1 1 0 1 1 1 1 1 0 1 1 1 1 1 0 1 0 1 1 0 1 1 1 1 0 1 0 1 1 0 1 1 0 1 1 1 1 1 1 1 1 0 1 0 1 0 0 0 1 Deletion Peak 13 9p21.3 chr9:21427296-26109931(probes 106251:106291) chr9:21931220-21983896(probes 106271:106272) chr9:1-32437024(probes 105253:106410) 1.0612e-23 1.0612e-23 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 1 0 1 1 1 1 0 1 1 1 0 0 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 0 0 1 0 1 0 1 1 1 1 1 0 1 1 1 1 1 0 1 1 1 1 0 0 0 1 1 0 1 1 1 0 1 0 1 0 1 0 0 1 1 1 1 1 0 1 1 1 1 1 1 1 0 1 1 0 0 1 0 1 0 0 0 1 0 1 1 1 1 1 0 1 1 1 1 1 0 1 1 1 1 1 Deletion Peak 14 10p15.1 chr10:1-25120196(probes 113010:114775) chr10:5029609-5163897(probes 113180:113187) chr10:5068567-5107524(probes 113184:113185) 0.17879 0.18198 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 1 0 0 0 1 0 1 1 1 0 1 1 0 0 0 1 0 1 0 0 0 1 1 0 0 0 1 0 0 0 0 1 Deletion Peak 15 10q23.31 chr10:79345556-110209229(probes 118481:120793) chr10:87804631-87881151(probes 118971:118973) chr10:79445463-110130249(probes 118491:120785) 0.0012597 0.0013009 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 0 1 1 0 0 0 0 0 0 0 0 0 1 1 0 0 1 1 0 0 0 1 1 1 0 1 0 1 1 0 0 0 1 1 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 1 0 0 1 1 1 1 0 0 1 0 1 0 0 1 1 0 0 1 0 1 0 0 1 0 1 0 1 0 0 0 1 0 1 0 1 0 1 0 0 0 1 1 0 0 0 1 0 0 1 0 1 1 1 0 1 0 1 1 Deletion Peak 16 11p15.4 chr11:1-10759220(probes 122740:123604) chr11:2983200-5068361(probes 122972:123122) chr11:1-8647461(probes 122740:123426) 0.015768 0.015924 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 1 0 0 1 1 1 0 0 0 0 1 1 0 0 1 0 1 0 0 0 1 1 1 0 0 0 1 0 0 1 0 1 0 1 0 1 1 1 0 1 1 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 1 0 1 1 0 1 1 0 1 0 0 0 0 1 1 0 1 1 0 0 1 0 1 0 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 Deletion Peak 17 11q22.1 chr11:78554852-135086622(probes 128098:131922) chr11:96382281-100697467(probes 129075:129121) chr11:92832032-135086622(probes 128786:131922) 0.009789 0.010238 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 1 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 1 0 1 0 1 1 1 1 1 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 1 1 1 0 0 0 0 0 Deletion Peak 18 13q14.2 chr13:43777504-72736067(probes 143374:144778) chr13:48372364-48462011(probes 143694:143697) chr13:27793971-109038571(probes 142063:146992) 2.7832e-06 0.00027066 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 1 1 1 1 1 1 1 1 0 1 1 0 1 1 1 0 0 1 0 1 1 1 1 1 1 0 1 1 1 0 0 1 1 1 1 1 0 1 1 1 1 1 0 1 0 1 1 1 1 1 1 0 0 0 1 1 1 0 1 1 0 1 0 1 1 0 1 1 0 1 0 0 1 0 0 0 0 0 0 1 1 0 1 1 0 1 1 0 1 1 1 0 0 0 0 0 1 0 0 0 1 0 1 1 0 1 0 1 1 0 1 Deletion Peak 19 13q33.1 chr13:43777504-114364328(probes 143374:147299) chr13:102711371-102778381(probes 146468:146481) chr13:27793971-109038571(probes 142063:146992) 0.0011497 0.18347 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 1 1 0 0 0 1 1 0 1 1 0 1 0 0 0 0 0 0 1 0 1 1 1 1 0 1 1 1 0 0 1 1 1 1 0 0 1 1 1 1 1 0 1 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 0 0 0 1 1 0 1 1 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 1 0 1 1 0 1 1 1 0 0 0 0 0 1 0 0 0 1 0 1 1 1 1 0 1 1 0 1 Deletion Peak 20 15q21.1 chr15:1-58989607(probes 153295:155904) chr15:44518096-45291741(probes 154756:154815) chr15:1-55520141(probes 153295:155579) 0.012086 0.012026 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 1 0 1 1 0 0 0 1 0 0 1 0 1 0 1 1 0 0 0 0 1 1 0 1 1 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 1 0 0 0 0 0 1 1 0 1 0 1 0 1 1 0 1 Deletion Peak 21 16p11.2 chr16:28566968-29036734(probes 161136:161148) chr16:28576630-28620040(probes 161137:161146) chr16:28595953-28606738(probes 161139:161140) 0.056628 0.056628 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 1 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 1 1 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 Deletion Peak 22 16q23.3 chr16:75656400-90338345(probes 163420:164285) chr16:80995165-86355715(probes 163746:164087) chr16:77291501-89270246(probes 163526:164279) 0.067136 0.066482 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 0 0 1 0 0 0 1 0 0 1 0 0 1 1 0 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 0 1 1 1 1 0 1 0 0 0 1 0 0 1 0 1 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 1 1 0 0 0 0 0 0 0 0 1 1 0 1 1 0 0 1 0 1 1 1 0 1 0 0 0 1 0 1 1 1 0 0 1 0 0 1 0 1 0 1 0 0 1 Deletion Peak 23 18q23 chr18:46891077-80373285(probes 172020:174176) chr18:77239024-80373285(probes 174136:174176) chr18:47035287-80373285(probes 172026:174176) 0.0010783 0.0010599 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 1 0 1 0 0 1 1 0 1 1 1 1 1 0 0 0 0 1 0 1 0 1 1 0 0 1 0 1 0 1 1 1 1 0 0 0 0 0 1 1 0 0 0 1 0 1 1 0 0 0 0 1 1 1 0 1 1 0 1 0 1 1 0 1 1 1 0 1 1 0 0 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 1 1 0 0 0 0 1 0 Deletion Peak 24 19p13.2 chr19:1-29526562(probes 174177:176276) chr19:8836946-8998419(probes 174981:175010) chr19:8935867-8958474(probes 174995:174999) 0.16638 0.17026 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 0 1 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 1 1 0 0 0 1 0 0 1 0 0 1 1 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 0 1 0 0 1 1 0 0 0 0 0 1 1 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 1 1 0 0 Deletion Peak 25 19q13.32 chr19:38191770-58617616(probes 177017:178690) chr19:46327572-47284644(probes 177717:177814) chr19:45228289-47293673(probes 177618:177815) 0.13626 0.13259 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 1 0 1 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 1 0 1 0 0 1 1 0 1 0 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 Deletion Peak 26 21q22.3 chr21:43982133-46709983(probes 184468:184635) chr21:44539209-44612901(probes 184505:184514) chr21:44094256-46709983(probes 184481:184635) 0.012207 0.012026 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 1 0 0 0 1 1 1 1 0 0 0 1 0 0 1 0 1 1 0 1 1 1 1 1 1 1 1 1 0 0 0 1 0 0 0 1 1 1 1 0 0 0 1 0 0 1 0 1 1 0 0 1 0 0 1 1 0 1 0 0 1 1 1 0 0 0 0 1 1 0 1 1 1 1 0 1 1 1 1 1 1 0 1 1 0 0 0 1 1 0 0 0 0 1 0 1 1 1 0 0 1 0 0 0 1 0 1 0 0 0 Amplification Peak 1 - CN values 1q21.2 chr1:119987105-154781648(probes 9773:10204) chr1:150513490-150629038(probes 9822:9830) chr1:119996646-154801163(probes 9774:10206) 0.0033068 0.0033068 Actual Copy Change Given 0.37606 0.32554 0.39085 -0.0022168 0.005147 0.1335 0 -0.0067468 0.043864 -0.00315 0.39178 0.03691 0.006109 0 0.63428 0.0098043 1.6834 -0.016837 -0.0074596 0.16075 0.36585 -0.0012126 0.80967 0.37732 0.23043 0.081961 0.59503 0.077328 0.11247 1.516 0.97681 0 0.16514 -0.22917 0.25712 0.077105 0.1122 0.22703 0.2834 3.6569 0.71623 0.0027218 0.0021124 0.46441 0.14261 0.85663 0.39993 -0.016045 -0.1144 0.45271 0.041864 0.086004 0.060559 -0.0034959 0.29184 0.037597 0.034301 0.65309 0.01948 0.16477 -0.00083438 0.33091 0.25159 0.048128 0.38079 0.27041 0.090516 0.0001622 0.0047245 0.25668 -0.023859 0.011242 -0.0033825 0.43735 0.26338 0.37898 0.022084 1.2177 0.10422 0.41789 -0.21982 0.57199 0.070673 0.33318 0.36612 0.26102 0.16648 2.824 0.27397 0.044445 0.006344 0.27973 0.10187 -0.023564 0.56216 0.58422 0.50889 0.12462 0.095659 0.010951 0.030448 0.019185 0.60226 0.50494 0.38031 0.87068 0.97013 2.3819 -0.027174 -0.025803 0 -0.0030697 0.12855 Amplification Peak 2 - CN values 2p15 chr2:3758129-88535405(probes 18142:23729) chr2:58241336-61825826(probes 21844:21982) chr2:58241336-61838516(probes 21844:21985) 0.15085 0.15085 Actual Copy Change Given 0.60026 0.047383 0.23918 0.18887 0.01276 0.047594 0.0053888 0.0027343 0.66249 -0.016096 0.56087 0.052057 0.03954 0.0080804 1.6127 0 1.555 0.00011507 0.2224 0.20278 0.13784 0.007809 1.141 0.51994 1.2843 0.76781 0.33547 0.061632 0.15096 0.88477 1.2956 0.044501 0.18263 0.30651 2.9672 0.07977 0.30339 0.35105 0.31579 -0.066873 0.038089 0.013566 0.012866 0.34197 0.50482 0.45883 0.41752 0.14528 0.48727 0.38485 0.027763 0.45009 0.61493 0.020841 0.54985 0.18229 0.4665 0.68882 0.07633 0 0.10626 0.037839 0.54538 0.25812 0.013037 0.28907 0.051292 0.28496 0.0031633 -0.0075397 0.11022 0.014814 0 0.38021 0.1853 0.26632 0.23103 0.065749 0 0.4734 0.0062244 0.3623 0.18106 0.10655 0.22572 0.31435 0.17672 0.1239 0.33314 0.4973 0.39376 0.20411 0.0061827 0.014414 0.32421 0 0.33206 0.60564 0.18794 0.0068767 0.20791 0 0.45832 0.26574 0.48778 0.11345 0.60367 0.17618 0.022321 0.35653 0.12697 0.23338 0.043621 Amplification Peak 3 - CN values 3q26.33 chr3:180967222-184187340(probes 46299:46367) chr3:180989795-182820237(probes 46302:46303) chr3:118550945-198295559(probes 42402:47240) 3.235e-48 4.385e-24 Actual Copy Change Given 2.1955 0.017534 0.32063 0.81122 0.99878 0.19806 0.18261 0.67394 0.96753 1.0699 1.5646 0.36362 0.0018502 0.032495 1.6569 0.79873 3.6569 0.0034701 0.43882 0.83399 0.7835 0.37801 2.8532 0.57931 1.6258 0.1803 0.86036 0.097342 0.54527 3.6569 1.8524 0.14359 0.63797 0.31647 3.6569 0.31756 0.85946 1.2711 0.62815 0.35304 0.75826 0.45534 1.4144 1.8182 0.31222 3.6111 2.1869 0.39538 0.42431 2.2097 0.18941 2.1567 3.085 0.016638 1.269 0.03955 0.0031855 3.6569 0.077638 0.096057 0.85521 0.74108 0.7582 0.027367 2.2456 3.3856 0.55957 0.17754 0.17987 0.57451 -0.0067592 0.58134 -0.015252 1.2775 1.4178 1.0207 0.79304 2.9319 0.49534 2.7538 0.90904 1.5133 1.516 0.40513 0.2819 1.2761 0.58563 -0.28323 1.2105 3.6569 3.1957 0.69976 0.43673 0.11616 1.9909 1.542 1.0832 1.3613 3.2682 3.0626 0.48438 0.047119 0.46799 2.083 3.6569 0.97733 3.6569 2.7665 0.1676 0.49362 0.24278 0.55156 2.4551 Amplification Peak 4 - CN values 3q27.1 chr3:180983690-184187340(probes 46301:46367) chr3:183162678-184177455(probes 46343:46366) chr3:118550945-198295559(probes 42402:47240) 4.1592e-49 2.7779e-11 Actual Copy Change Given 2.1955 0.017534 0.32063 0.81122 0.99878 0.19806 0.18261 0.67394 0.96753 1.0699 1.5646 0.36362 0.0018502 0.032495 1.6569 0.79873 3.6569 0.0034701 0.43882 0.83399 0.7835 0.37801 2.8532 0.57931 1.6258 0.97607 0.86036 0.097342 0.54527 3.6569 1.8524 0.14359 0.63797 0.31647 3.6569 0.31756 0.85946 1.2711 0.62815 0.35304 0.75826 0.45534 1.4144 1.8182 0.31222 3.6111 2.1869 0.39538 0.42431 2.2097 0.18941 2.1567 3.085 0.016638 1.269 0.03955 0.0031855 3.6569 0.077638 0.096057 3.6569 0.74108 0.7582 0.027367 2.2456 3.3856 0.55957 0.17754 0.17987 0.57451 -0.0067592 0.58134 -0.015252 1.2775 1.4178 1.0207 0.79304 2.9319 0.49534 2.7538 0.90904 1.5133 1.516 0.40513 0.2819 1.2761 0.58563 -0.28323 1.2105 3.4391 3.1957 1.7954 0.43673 0.11616 1.9909 1.542 1.0832 2.9762 0.21649 3.0626 0.48438 0.047119 0.46799 2.083 3.6569 0.97733 3.6569 0.74172 0.1676 0.49362 0.24278 0.55156 2.4551 Amplification Peak 5 - CN values 4q12 chr4:53490283-56815900(probes 50163:50365) chr4:55125316-55831342(probes 50273:50302) chr4:51877877-61524726(probes 50047:50393) 0.0016037 0.0016037 Actual Copy Change Given 0.41149 -0.003042 -0.1831 0.15963 -0.056582 -0.059397 -0.17495 0.61719 -0.032986 -0.10942 -0.25189 -0.18957 -0.16872 -0.012261 3.6569 -0.015442 -0.15744 -0.0063129 -0.0024065 -0.22052 -0.13297 -0.051775 3.6569 0.11459 -0.15198 -0.075231 -0.21019 -0.729 0.36434 -0.57318 -0.31882 -0.0046968 -0.037748 0 -0.04823 -0.12763 -0.29256 -0.026105 0 -0.0060178 0.029709 0 -0.00077617 -0.41995 0.8014 -0.49755 -0.017173 0.0014603 -0.26479 -0.45728 0.056307 -0.72689 0.065938 -0.015951 0.84387 0.01324 -0.034505 -0.18801 -0.1262 -0.14014 0 -0.27411 0.23421 -0.26362 -0.0065492 -0.25362 0.69148 -0.13985 -0.018703 -0.0050287 -0.10057 -0.55768 0.027014 -0.072521 0.83061 -0.087557 -0.087453 -0.048034 -0.17497 -0.34846 -0.31356 -0.034284 -0.65429 -0.21987 -0.20193 -0.35109 -0.10676 2.4995 -0.42586 0.16172 0.86247 -0.82613 -0.068612 -0.043196 -0.57987 -0.033692 -0.11963 -0.03401 0.1194 -0.041907 0.60218 -0.0046954 -0.23812 0.28451 -0.46236 0.14066 3.6569 -0.17178 -0.09981 0.089393 0.022491 -0.26022 -0.062108 Amplification Peak 6 - CN values 5p15.2 chr5:7899893-16077395(probes 60628:60962) chr5:11732295-14581872(probes 60861:60944) chr5:6656202-21871708(probes 60571:61395) 0.00098104 0.00098104 Actual Copy Change Given 0.98994 0.20256 0.10326 0.70786 0.2746 0.26312 0.43338 1.9688 0.28011 1.4146 3.6569 0.40813 0.32794 0.42559 0.76644 -0.017604 -0.18362 0.075468 0.31584 0.83629 1.9148 0.9978 2.6898 0.45224 1.3515 0.59404 0.09963 -0.02574 1.2713 -0.071317 0.81326 0.17718 0.59751 0.94309 0.49286 0.14155 0.83002 0.45435 0.30683 -0.28558 0.72257 1.1488 0.38712 0.40318 0.57573 0.78981 1.5161 0.56 0.50554 0.35612 1.807 2.2934 1.1809 -0.0014385 0.65673 0.28374 0.44866 0.46844 0.28897 0.096646 0.1455 0.028263 0.93509 0.86555 0.36388 0.25236 0.1413 0.40847 0.49779 0.77934 0.13583 0.91585 0.04102 -0.072658 0.15412 0.21291 0.60729 2.6402 -0.017861 0.23011 0.84622 0.29692 0.66948 0.13147 0.65598 1.2546 0.471 -0.23182 0.61297 2.9811 0 1.6368 0.37495 -0.0093618 0.56814 0.49495 0.8371 0.84611 0.18495 3.1341 0.14048 0.22022 0.12566 -0.12212 0.21372 0.15469 0.15926 0.78616 0.098751 2.1918 0.39887 0.60137 0.1181 Amplification Peak 7 - CN values 6p21.1 chr6:40423168-61681081(probes 76646:77846) chr6:41638848-42048480(probes 76693:76721) chr6:41350887-42077726(probes 76678:76724) 0.17557 0.17557 Actual Copy Change Given -0.46886 0.00058649 -0.19027 -0.012374 -0.12748 0.10889 0.0040549 0.63959 0.22868 0.45507 0.45553 -0.011894 0.051515 -0.041594 0.015949 0.0011274 0.72161 -0.017585 0.2258 0.057385 0.064431 0.050119 -0.022169 0.067435 -0.10174 0.034003 0.30704 -0.67964 0.038889 3.6569 0.30721 -0.005214 0.11112 0.24821 2.5221 0.067921 -0.0097109 0 -0.1958 0.75855 0 -0.0016878 -0.0028759 0 -0.0073173 0.11768 -0.053973 0.12124 0.043086 0.09708 -0.018941 -0.70778 -0.43389 0.0099143 1.2045 0.019658 2.5221 0.0047384 -0.059552 0.0454 0.34246 -0.27514 -0.0095716 0.022342 -0.0062093 -0.0043762 0.067762 -0.11838 -0.012613 0.039889 0.072353 -0.56386 -0.033699 -0.017459 -0.20704 0.074281 -0.18925 0.80801 0.18604 0.012403 -0.0048503 0.0016878 0.035027 0.21617 0.0078507 -0.18297 0.073194 0.044092 0.24386 0.79802 0.028124 0.18105 0.315 -0.06621 0.45037 0.044846 0.78078 0.19463 0.33766 -0.0069899 0.22732 -0.027879 0.45206 -0.11601 0.14859 1.2734 -0.52343 -0.15445 0.0030883 0.081152 -0.0086608 0 0 Amplification Peak 8 - CN values 7p11.2 chr7:53035651-55375829(probes 89605:89671) chr7:53036585-55366003(probes 89606:89670) chr7:53036585-55825286(probes 89606:89699) 0.0077632 0.010039 Actual Copy Change Given 0.34336 0.017319 0.22657 0.16622 0.085844 0.053376 0.0042799 0.0043174 0.043157 0.41906 0.38527 0.14181 -0.019012 0.27942 0.76731 -0.014342 0.68352 0.13834 0.19791 -0.15929 -0.15703 0.054331 0.54573 0.53727 -0.15725 0.040664 0.22152 0.060367 -0.1214 0.59401 -0.15728 0.13457 0.1577 0.21952 0.34771 0.12224 0 -0.00079142 0.31758 -0.60087 0.0058824 3.6569 0.0010955 0.016567 0.15719 -0.40633 0.6626 0.66769 -0.24593 0.2027 0.04218 0.091037 0.48233 0.0096677 0.53129 0.036101 0 0.37689 0.048252 0.052975 -0.16231 0.02911 0.24916 0.36542 0 0.26096 0.17341 -0.14697 0.01257 0.29748 0.2632 -0.0015617 0.12055 0.0046008 3.6569 0.22923 0.22379 -0.34818 0.11506 -0.34113 0.28729 0.32124 3.3821 0.11448 -0.0059425 0.26168 0.010729 -0.18417 0.2387 0 -0.19749 -0.31006 0.099863 0.011841 0.42479 -0.017441 0.54826 2.3161 0.13528 0.0082028 -0.35667 0.065738 0.60942 0.2778 0.035012 0.2912 0.6472 0.28796 0.061857 -0.28959 0.033358 3.6569 0.11384 Amplification Peak 9 - CN values 7q31.1 chr7:90403968-110896494(probes 91312:92685) chr7:107475385-109959603(probes 92563:92680) chr7:90413434-110663742(probes 91313:92683) 0.017189 0.019776 Actual Copy Change Given 0.34336 -0.30186 0.22657 0.16622 0.085844 0.053376 0.0042799 0.62385 0.031794 0.014118 0.38527 0.11177 -0.1359 -0.13689 -0.009087 -0.014342 2.3469 -0.027213 -0.0090707 0.027198 0.059331 0.054331 3.6569 0.16295 0.68037 0.058705 0.3941 0.060367 0.053437 0.10913 0.040578 -0.0057034 0.1577 3.435 0.040025 0.12224 0 0.034971 0.063701 0.63691 0.0058824 1.7761 0.0010955 0.016567 0.15719 0.35795 0.6626 0.20777 0.037959 0.19682 -0.011265 2.7864 0.054451 0.0096677 0.3344 -0.0043075 0.78337 0.37104 0.048252 0.052975 0.012414 0.02911 -0.0034392 0.60916 0 0.26096 -0.020383 0.12108 0.01257 0.76162 -0.0023595 -0.54154 0.12055 -0.0019108 0.063156 0.36068 -0.19333 -0.35659 0.11506 0.35891 0.58267 0.24933 0.033239 0.23071 -0.0059425 0.26168 -0.0027333 -0.77583 0.54379 0 0.035082 -0.31006 -0.019659 0.011841 0.42479 -0.017441 0.54092 -0.034522 0.17572 0.18934 0.22654 0.015511 0.071525 -0.093373 0.030372 0.017858 0.64483 0.1282 0.061857 -0.28959 0.033358 -0.0061554 0.11384 Amplification Peak 10 - CN values 8p11.23 chr8:38281446-38522237(probes 98141:98158) chr8:38305468-38512364(probes 98146:98157) chr8:33597538-46842371(probes 98026:98439) 3.5641e-29 3.5641e-29 Actual Copy Change Given 0.2537 -0.0013678 -0.13472 -0.17953 0 -0.09557 -0.0055098 -0.12135 0 3.6569 0 -0.14578 -0.16679 -0.1458 1.2746 2.0447 3.6569 -0.0076999 0.20978 -0.16579 -0.27219 1.0894 2.1451 1.1647 3.6569 3.6569 0.061215 1.8643 -0.1128 0.0010667 0.029967 -0.064017 -0.051584 0.95378 -0.38557 2.3768 3.6569 0.18709 0.053659 3.6569 -0.66676 2.2401 -0.41685 -0.40382 0.12714 0.10903 -0.11191 -0.19261 1.1018 0.36842 -0.11942 0.58718 0.014292 0.0010317 0.012306 -0.0061775 0.47838 -0.17416 0.023161 1.2275 3.6569 1.003 0.94233 0.28848 0.28797 2.2598 0.91785 0.12793 3.1173 0.066959 0.49451 -0.56427 0.036736 0.0090661 0.18982 1.332 -0.18405 -0.36453 0.15681 -0.71999 0.26351 0.31267 0.042269 0.094603 3.6569 0.23986 0.17077 -0.77771 0.90825 -0.83323 0.32252 0.8004 1.5288 0.0082516 0.043316 -0.58127 0.098755 0.41083 3.4503 2.6826 3.6569 0.060394 -0.75027 0.70515 0.95708 2.7295 2.7834 0.81341 1.0161 0 0.28559 0.5109 2.0715 Amplification Peak 11 - CN values 8q24.21 chr8:125426703-133306419(probes 104292:104664) chr8:126557412-129748478(probes 104295:104368) chr8:90005390-145138636(probes 101518:105252) 1.7771e-06 1.7771e-06 Actual Copy Change Given 0.47593 -0.0013678 0.34731 0.45584 0.29913 0.41094 -0.0055098 3.6569 0 0.15188 0 0.20292 0.45176 0.21489 1.4824 0.26744 2.135 -0.0076999 0.20978 -0.16579 0.40672 0.48457 0.24065 0.58385 0.70779 0.53041 0.51233 0.23805 0.10986 0.20772 0.029967 0.18102 0.47042 2.4531 0.36626 0.52445 1.1327 1.5249 0.053659 0.99654 0.7633 0.0016143 0.0072788 0.0738 0.12714 0.92743 0.73967 0.18722 1.1018 0.36842 0.37933 1.5622 0.52947 0.0010317 0.012306 -0.0061775 0.47838 -0.17416 0.023161 -0.010727 0.48839 0.40368 0.80128 0.28848 0.33397 0.51459 0.31139 0.12793 0.84531 0.25797 0.093288 -0.0049457 0.036736 0.19997 0.12736 0.34216 0.19792 -0.36762 0.15681 2.7048 1.2078 0.76228 0.042269 0.27714 0.025406 0.23986 0.96453 0.12366 0.25828 -0.0035112 0.52963 0.14271 -0.091404 0.0082516 0.55728 0.21944 -0.069242 0.51997 0.19478 0.25456 0.65482 0.060394 -0.32442 0.30149 0.79005 0.32705 1.0397 0.12267 0.3413 0.60344 0.11658 0.20103 0.10232 Amplification Peak 12 - CN values 9p13.3 chr9:35554106-36849553(probes 106685:106781) chr9:35870424-36052242(probes 106723:106729) chr9:32635602-68452788(probes 106431:106966) 0.00057929 0.00057929 Actual Copy Change Given 0.17541 -0.37652 0.11505 -0.17216 -0.22923 -0.087509 -0.16997 -0.6731 -0.61261 -0.3011 -0.029045 0.025291 -0.0057684 -0.15012 0.065464 0.011509 0.84945 -0.032464 0.60273 3.5482 -0.27835 -0.17583 0.27291 -0.24208 -0.15762 0.067282 -0.2025 0.10312 -0.13263 -0.39547 0.33346 -0.042582 0.13311 -0.32168 1.906 -0.0018152 0.56477 -0.3306 -0.20988 -0.62151 -0.70656 -0.35149 -0.010843 0.2834 -0.17587 0.6004 1.8608 -0.22793 0.00060174 1.9244 -0.19417 0.882 0.080214 0.0050219 0.55593 -0.044091 -0.47563 -0.48271 0.032149 1.0317 -0.52691 -0.24362 -0.0049844 -0.30094 0.0013313 -0.26209 -0.095194 -0.12123 -0.0024716 0.23347 0.14922 -0.5511 -0.10411 -0.41044 -0.20234 -0.070291 1.0326 -0.34963 -0.16789 0.74836 -0.29114 0.33062 -0.6437 0.48913 -0.12911 0.46932 0.37715 -0.7859 -0.43183 -0.073659 -0.21332 0.69287 -0.0446 0.032019 1.0644 0.015134 0.30319 -0.13099 -0.18197 -0.55089 -0.35149 -0.08211 -0.30359 -0.10914 -0.46495 -0.27383 -0.50877 3.6569 -0.16559 0.070765 -0.13042 0.81714 -0.11625 Amplification Peak 13 - CN values 11q13.3 chr11:70116343-70661788(probes 127381:127424) chr11:70153149-70283934(probes 127387:127399) chr11:68449093-77305239(probes 127261:127991) 3.8211e-19 3.8211e-19 Actual Copy Change Given 3.6569 0 -0.015932 -0.0035056 -0.21632 0.076552 -0.013778 0.0033382 0.061415 0.0053152 -0.0041739 -0.11701 2.7799 0.11918 3.6569 0.010966 3.6569 0.20222 0.22595 0.013201 0.22476 0 0 0.18418 -0.13685 -0.32709 0.042177 -0.54799 1.6253 -0.29117 0.13045 0.054776 0 0.35313 0 0.15481 0.3015 0.022972 -0.053835 1.0949 3.6569 0.01281 -0.0017751 -0.027055 3.6569 1.5699 -0.078801 0.12039 0.16756 0 -0.0023096 0 -0.44073 0.0033785 -0.15431 0.0017225 0.39118 -0.11105 0.087736 0.074676 0.064746 -0.048349 -0.0046415 0.040145 3.6569 -0.0055665 -0.0080685 0 -0.0013803 0.39849 0.28581 -0.0046996 0.096734 3.6569 0.54208 0 0.23236 1.357 0.060924 0.34314 0.087779 0.00065582 0.046239 1.6703 0.012354 -0.34277 1.9082 3.6569 0.91258 -0.011731 -0.046423 0.18954 0.29961 0 -0.013497 0.37517 0.46455 0.22465 -0.16115 -0.040542 0.34225 0.014433 0.18271 0.3028 -0.39245 1.8659 3.6569 0.035113 0.0042077 3.3924 0.12827 -0.015233 0.00016359 Amplification Peak 14 - CN values 12p12.1 chr12:24583598-25513591(probes 133708:133730) chr12:25089813-25503737(probes 133713:133729) chr12:24584142-27991853(probes 133709:133941) 0.00068669 0.00068669 Actual Copy Change Given 0.84195 0.46887 -0.11256 -0.008179 0.044476 0.047743 -0.011312 0 0.051274 0.25143 0.19337 0.16728 0 0.29973 0.85783 0.0046801 2.2777 0.19539 0.52144 -0.032108 0.06724 0.12621 0.5245 0.58423 -0.14924 0.056479 3.6569 0.072296 -1.8022e-05 0.68352 -0.033151 0.051909 0.20219 0.26504 0.7333 0.42451 0.25436 0.015748 0.15168 1.7387 0.72235 -0.0018249 -0.0024273 0.010196 0.17282 3.6569 0.27914 0.3479 0.006319 0.43979 0.16469 -0.0097269 0.044487 -0.0081252 0.293 -0.0075024 0.41153 0.09178 0.068785 1.1631 0.010426 0.68227 0.75471 -0.32131 0.37131 0.51728 0.11837 0.38303 0.01395 -0.065749 0.054903 0.010238 0.02446 0.0056113 0.21731 0.013407 0.060312 0.064062 0.63858 3.6569 0.57351 0.27853 0.90784 0.10568 0.0025829 0.2635 0.15854 0.060705 -0.086318 -0.014721 0.13249 -0.26935 0.10271 0.0073901 0.32051 3.6569 0.43569 0.36941 0.27589 0.011226 0.28063 -0.01913 0.084442 1.0541 1.3412 0.35534 -0.53043 0.2128 0.14881 1.1847 0.010491 0.17081 -0.052827 Amplification Peak 15 - CN values 12q15 chr12:68846781-70533883(probes 136732:136877) chr12:69390339-69958423(probes 136788:136828) chr12:68856702-70552752(probes 136733:136879) 0.027938 0.027938 Actual Copy Change Given -0.46653 0.0091621 3.6569 -0.008179 0.044476 0.047743 -0.011312 0.0013133 0.69804 0.95406 0.19337 0.29356 0 0.82644 0.83518 0.0046801 0.62408 0.0028939 0 -0.032108 0.06724 0.015735 0.26813 0.12637 0.22827 -0.35928 0.074768 0.072296 -1.8022e-05 0.039608 0.74438 0.051909 -0.043531 0.26504 0.27521 0.42451 0.0014631 0.015748 0.15168 0.041034 0.72235 -0.0018249 -0.0024273 0.010196 0.17282 -0.52377 1.0472 2.1281 0.006319 0.43979 1.2551 -0.0097269 0.40659 -0.0081252 0.293 -0.0075024 0.39626 0.09178 0.068785 0.04859 0.010426 0.033514 0.25114 0.021676 0.003584 0 -0.001383 -0.0063737 0.01395 -0.065749 0.054903 0.010238 0.02446 0.0056113 0.21731 0.013407 -0.19325 0.064062 -0.0065257 0.41489 0.012284 0.28267 0.040227 -0.001523 0.0025829 0.2635 0.014411 0.060705 0.24646 0.089522 0.25422 0.20375 0.10271 0.0073901 0.62468 0.013462 0.68335 0.13476 0.20694 0.01538 -0.039135 -0.01913 -0.29672 1.4222 0.029352 0.13178 0.50068 0.076533 -0.077782 2.402 0.010491 0.17081 0.28247 Amplification Peak 16 - CN values 13q34 chr13:112559636-114364328(probes 147211:147299) chr13:112683403-113433719(probes 147214:147256) chr13:112068637-114364328(probes 147191:147299) 0.013177 0.013177 Actual Copy Change Given -0.07805 0.028172 -0.0089699 -0.16974 -0.24934 0.13563 0.0093502 0.023357 -0.6638 -0.32277 -0.056162 -0.16186 -0.10245 -0.004813 -0.41635 -0.017246 0.691 -0.036483 -0.017972 0.06628 0.030993 -0.18239 0.21422 -0.24674 -0.53621 -0.52306 -0.21178 0 -0.13281 -0.42465 -0.21578 -0.077475 0.12526 -0.36379 -0.36151 -0.14922 -0.31594 0.47058 -0.044033 -1.2284 -0.70952 -0.3786 -0.41036 -0.18372 0.25473 0.99504 3.6569 -0.037242 -0.5243 -0.12733 0.19162 -0.73423 -0.45607 -0.02381 0.0001012 -0.041378 -0.46826 -0.4638 3.6569 -0.099862 -0.52695 -0.27512 -0.034927 -0.34635 -0.0167 -0.01707 -0.12385 -0.037304 -0.29507 -0.10722 0.18776 -0.032306 -0.042937 0.023699 -0.17691 -0.042035 -0.044892 0.7474 -0.08457 0.075335 -0.032718 -0.043937 0.022709 -0.10194 -0.19016 -0.34114 -0.084304 -0.78499 -0.17194 0.050223 -0.20487 -0.83182 1.0452 -0.082279 -0.024512 3.6569 0.76935 -0.027772 -0.26124 -0.0114 0.10503 -0.069998 -0.32713 1.5407 -0.44207 -0.36806 -0.56637 -0.22706 -0.08633 -0.31969 -0.13988 0.061592 -0.13335 Amplification Peak 17 - CN values 14q13.3 chr14:33940969-38218702(probes 148133:148425) chr14:36734596-37812291(probes 148323:148419) chr14:36491312-38237373(probes 148299:148427) 0.1129 0.1129 Actual Copy Change Given 0.158 -0.35253 1.2402 0.24353 -0.25483 0.0179 0.0095103 0.016431 -0.63722 -0.012558 -0.11573 -0.12446 -0.15188 0.012185 -0.39301 -0.23476 1.3465 -0.0051683 0.23492 0.66843 -0.28383 -0.066374 0.058203 0.44562 3.6569 0.063725 -0.16759 0.048375 0.13311 0.43625 -0.32585 0.056236 0.38404 0.028315 -0.38882 -0.22304 0.9561 -0.066327 0.032009 0.026543 0.032809 -0.35441 0.00089159 -0.41389 1.733 -0.11664 0.35022 -0.09838 0.41757 0.0086929 -0.033334 0.099618 -0.040183 -0.01504 0.2916 -0.032325 0.42373 0.36325 0.18988 -0.15094 0.4483 -0.23072 0.51994 0.36458 0.0039896 0.15532 -0.083799 0.11593 0 -0.063934 0.11809 0.017161 0.056379 -0.28982 0.25609 -0.14535 0.016237 -0.34443 0.030565 -0.015294 0.27995 -0.43754 -0.63832 0.11427 0.13138 -0.27775 0.039646 -0.46975 0 0.87691 0.10942 -0.38797 0.14646 0.0097193 0 -0.55946 0.29489 0.19557 -0.20292 -0.51679 -0.34271 0.01406 0.12945 0.52393 -0.39061 0.78955 0.60841 -0.10478 0.11982 -0.096214 0.27828 0.87181 -0.0036966 Amplification Peak 18 - CN values 15q26.3 chr15:83010906-101991189(probes 158092:159423) chr15:98969672-99105178(probes 159262:159263) chr15:98969672-99130344(probes 159262:159266) 0.20028 0.20028 Actual Copy Change Given -0.058249 -0.050485 0.05651 0.0078034 -0.0017723 0.060988 -0.0035139 3.6569 -0.23179 -0.024438 -0.070057 -0.012967 0.25932 0.0053694 1.4053 0.014907 -0.036876 0.003634 0.23325 0.036608 0 -0.058062 0.12746 0 0.087566 0.43525 0.10251 -0.67537 0.31285 -0.014322 0.58601 0.045401 0.13085 0.314 0.6603 0.0090674 0.24518 -0.054826 0.045463 0.55098 1.4213 0.36946 0 -0.0067233 0.13117 0 0.2992 -0.25989 -0.21507 0.56254 -0.067537 0.82354 -0.44764 -0.0087822 0.5697 0.024531 -0.44633 0.01052 -0.041272 -0.11038 -0.029076 -0.27194 0.25088 0.019938 0.0025177 0.053057 -0.01215 0.12727 0.010481 -0.10815 -0.10418 0.0057711 -0.11658 -0.11783 -0.014673 0.008079 0.013584 0.14203 -0.06442 -0.34559 0.015991 -0.33725 -0.58555 0.40119 -0.018681 0.012595 0.11172 0.068448 0.54858 -0.41712 -0.013604 -0.30972 -0.011287 -0.0040356 0.51856 0.027212 -0.22559 0.12204 0.015672 0.0057795 0.53383 0.013763 0.10028 -0.09056 0.097851 0.11364 -0.07211 0.20751 0.0015713 -0.28584 -0.010107 -0.021456 0.036512 Amplification Peak 19 - CN values 17q23.3 chr17:61858062-83257441(probes 168377:169933) chr17:64329744-64551561(probes 168632:168641) chr17:64329744-64581311(probes 168632:168644) 0.20936 0.20936 Actual Copy Change Given 0.46091 0.011845 0.4257 0.38013 0.029505 0 0.02191 0.0023365 -0.62372 0.18445 0.29435 0.24249 0.11452 -0.0033963 0.45029 0.28718 1.649 0.053376 0.22744 0.31614 0.072 0.058683 0.562 0.64484 0.63164 0.23449 0.32738 0.1551 -0.015382 0.65993 0.44806 -0.056364 0.17706 0.60148 0.42443 0.075192 0.022962 0.034641 0.072708 -0.039935 -0.0072717 0.029644 -0.39945 0.56117 0.16611 0.19919 0.5161 -0.10434 0.085223 0.46147 -0.011938 0.56468 0.040997 0 0.19373 -0.0073974 0.016834 0.12018 0.087905 -0.024244 0.12838 0.078741 0.024204 0.63872 0.014112 1.0426 0.007237 0.10005 -0.24559 0.20422 0.061738 2.3234 0.024115 0.039491 0.19684 0.26527 0.030914 0.11906 0.012415 0.37917 0.034814 0.013587 0.077501 0.0041813 0.04285 0.27838 0.11316 0.073243 0.28707 3.6569 0.37521 -0.27678 0.093113 -0.014148 0.0078897 0.033666 0.31032 0.094619 0.24239 0.0074402 -0.0037353 -0.037991 0.080726 0.26194 0.52303 0.8316 0.58043 0.24989 0 0.26666 0.055448 0.0071633 0.1509 Amplification Peak 20 - CN values 18q11.2 chr18:21654812-32470449(probes 170858:171295) chr18:24468974-25089442(probes 171041:171042) chr18:24468974-25203282(probes 171041:171045) 0.11965 0.11965 Actual Copy Change Given 0.32485 -0.37551 0.19633 0.14093 -0.0023027 -0.084931 -0.030258 -0.011545 -0.020433 -0.26822 0.075145 0.14401 0.010279 0.0074179 0.046753 0.0012356 3.6569 -0.008179 0.41211 -0.22726 -0.26811 0.029137 -0.0054158 -0.10217 0.65663 -0.021315 -0.21014 0.92516 0.3506 0.27416 -0.24965 -0.046611 -0.031063 0.70057 0.6096 0.11524 0.20739 0.044732 -0.096639 3.0489 0.02147 -0.0077523 0.022014 -0.40818 -0.12188 -0.18909 0.84469 -0.11937 -0.36744 0.59198 -0.12605 0.082735 0.040882 0.014217 0.077102 -0.0027541 2.1965 -0.16697 -0.093486 -0.015898 0.022692 -0.27148 -0.0056301 0.039916 -0.36158 0.27747 0.025958 0.0098837 -0.0018983 -0.029043 -0.14649 -0.018894 -0.029293 -0.0076391 -0.21782 -0.073158 -0.18454 0.077744 -0.13253 0.026488 0 0.97284 -0.011749 0.27492 -0.0014094 0.28362 0.028362 0.090848 1.123 -0.29078 0.69086 0.23198 0.16173 0.01545 -0.042893 0.60211 -0.14253 -0.31624 0.18357 0.51168 -0.048039 -0.06505 0.18374 0.67424 0.10332 2.0071 1.6736 0.056993 -0.098565 0.086068 -0.057222 0.21616 0.3682 Amplification Peak 21 - CN values 19q13.13 chr19:36569686-39278560(probes 176857:177118) chr19:37887911-38164456(probes 176986:177012) chr19:23866186-41267174(probes 176273:177308) 4.3248e-07 4.3248e-07 Actual Copy Change Given 0.4886 0.078375 0.20634 0.16961 0.69945 -0.11458 -0.0014246 0.0075793 -0.58153 0.05311 0.55342 0.23134 0.013565 -0.0081749 0.0014117 0.0051234 -0.019478 0.018454 -0.20895 0.037717 0.23438 -0.0047092 0.42331 -0.24236 0.36385 0.069084 -0.083121 -0.67078 0.46306 0.39276 0.31082 0.065291 0.51165 -0.25547 0.30552 0.061081 0.26573 1.2477e-05 0.3395 0.59161 -0.71023 -0.01112 0.01426 2.1245 0.23465 1.7736 0.53212 0.094911 -0.10526 1.5163 0.13744 3.4526 0.052549 0.0021499 0.25668 0 -0.094517 0.1184 0.070322 0.1045 0.016214 0.085605 0.031526 0.73966 0.39268 0.25156 0.071881 -0.0055914 0.027294 0.27912 -0.035142 0.28458 0.0019751 0.0064511 0.16425 0.45812 -0.039887 -0.31975 0.16923 -0.39424 0.35269 0.38349 0.77245 0.99142 0.016635 0.30791 0.59067 -0.8074 0.051261 3.6569 0.076771 3.6569 0.038551 0.016365 0.019393 0.55377 0.58661 -0.043817 0.17545 -0.037089 -0.0019731 0.042957 0 0.2802 0.37157 0.83714 3.6569 0.51902 -0.089127 0.52642 0.12642 0.46288 0.052632 Amplification Peak 22 - CN values 20q11.21 chr20:31259439-34855164(probes 180356:180681) chr20:32084566-32215246(probes 180435:180448) chr20:31259655-35321070(probes 180357:180729) 0.0087196 0.0087196 Actual Copy Change Given 0.43069 0.017169 0.5343 0.18431 0.30123 0.11404 0.015083 1.952 0.61508 0.66068 0.034309 0.041574 1.0754 -0.0092901 0.41763 0.013183 -0.028277 -0.020357 0.23142 0.11208 0.17551 0.10663 0.89654 2.717 0.83422 0.05427 0.33445 -0.24113 0.10743 0.22613 0.3337 0.13162 0.3639 1.526 0.37598 0.24615 0.60097 0.031216 -0.098198 2.4571 2.17 0.0085133 0.0050302 0.0080929 0.27403 0.072776 0.71262 0.20966 0.091601 0.25734 0.18147 -0.05562 0.045764 0.012511 0.56027 0.16808 0.86139 0.3878 0.060325 0.092437 0.16367 0.023044 0.24347 -0.11596 -0.0032261 0.2381 0.090093 0.35704 0.0037159 0.28586 0.15048 -0.0042002 0.05185 0.025477 0.17473 0.48142 0.0077143 0.17181 0.030302 0.011008 0.39848 2.3214 0.049926 0.3804 0.2535 2.0389 0.11316 0.096836 1.1651 0.498 0.051208 0.51654 0.28568 0.019778 0.27896 1.9708 0.24522 0.53664 0.8835 1.1023 0.15433 0.010359 0.076145 0.47961 0.41157 0.43302 0.55026 0.22409 0.27703 0.57908 0.46185 0.23653 0.035377 Deletion Peak 1 - CN values 1p36.23 chr1:1-149930424(probes 1:9775) chr1:8340014-8889553(probes 484:519) chr1:8361899-8889553(probes 488:519) 0.058847 0.19437 Actual Copy Change Given -0.4122 0.01032 0.048935 -0.0022168 0.005147 0.11109 0 0.71178 0.12837 0.24211 -0.23831 -0.12027 0.006109 0 -0.39873 0.0098043 -0.00037704 -0.016837 -0.039353 -0.23159 -0.2103 -0.0012126 -0.012576 -0.21431 0.25584 -0.082355 -0.16974 -0.696 0.12992 -0.4818 0.070615 0 -0.054971 -0.18586 -0.37985 -0.14812 -0.0057601 -0.0017584 -0.22406 0.03994 -0.015149 0.032621 0.019162 -0.43457 0 -0.18585 -0.01492 -0.049192 -0.22475 -0.15336 0.20053 0.086004 -0.45768 -0.0034959 -0.27381 0.073006 0.017263 -0.45636 0.01948 -0.13235 0.013917 -0.26495 -0.00062096 0.069241 0.0087917 -0.26766 -0.10459 -0.10482 0.0062926 0.026887 -0.023859 -0.018113 -0.046573 -0.39216 -0.020632 0.0036882 0.018807 -0.24727 -0.0078476 -0.72609 -0.28124 -1.2823 -0.62453 -0.25601 0.037719 -0.32789 -0.12588 0.068304 0.014188 -0.2868 -0.11743 0.25606 0.090052 -0.023564 -0.015574 0.58422 0.135 0.002862 0 0.010951 -0.12922 -0.030809 0.55779 -0.10243 -0.4453 -0.081585 -0.49172 -0.15965 -0.069544 0.068996 -0.001962 -0.0063599 0.018014 Deletion Peak 2 - CN values 1p13.2 chr1:100520352-149930424(probes 8597:9775) chr1:112481155-112538870(probes 9214:9217) chr1:77875087-149940299(probes 6549:9776) 5.765e-06 0.00043896 Actual Copy Change Given -0.4122 -0.37862 -0.071185 -0.0022168 0.005147 -0.10656 0 -0.0067468 0.043864 -0.24151 -0.23831 -0.11274 0.006109 0 -0.38748 0.0098043 -0.08729 -0.016837 -0.039353 -0.23501 -0.0024135 -0.0012126 -0.012576 -0.21431 -0.52785 -0.26123 -0.16974 -0.696 -0.06247 -0.45221 -0.69045 0 -0.054971 -0.22917 -0.39123 -0.20296 -0.15688 -0.33059 -0.2052 0.56269 -0.69447 0.0027218 0.0021124 -0.41936 0 -0.44284 -0.023045 -0.19173 -0.22475 -0.41187 -0.15341 0.086004 -0.45234 -0.0034959 -0.27381 -0.037967 0.0020444 -0.47249 0.01948 -0.17038 -0.48865 -0.26495 -0.00062096 -0.31282 -0.37755 -0.25361 -0.10305 0.0001622 0.0062926 -0.087367 -0.023859 0.011242 -0.046573 -0.3851 -0.20989 -0.018015 0.018807 -0.35943 -0.0078476 -0.038385 -0.00041446 -0.44196 -0.64732 -0.0029354 0 -0.32789 -0.10929 -0.77542 -0.15823 -0.82155 0.005494 0.27973 0.090052 -0.023564 -0.027246 0.58422 0.11168 -0.16795 -0.20051 0.010951 -0.12922 0.019185 -0.21895 0.33823 -0.12212 -0.15579 -1.2929 -0.29107 -0.069544 -0.025803 -0.10592 -0.0030697 0.013298 Deletion Peak 3 - CN values 2q36.1 chr2:212419409-242193529(probes 32641:34806) chr2:218764538-224418243(probes 33151:33434) chr2:209730420-242193529(probes 32396:34806) 0.00018825 0.00018825 Actual Copy Change Given 0 0.047383 -0.082071 -0.15788 0.01276 -0.068694 0.0053888 0.012775 -0.00077479 -0.034875 0.048154 -0.12489 0.03954 0.0080804 -0.0053965 0 -0.094636 0.00011507 0.2224 0.20278 0.036773 0.007809 0.23411 -0.22824 0.31076 -0.53311 0.18515 -0.70259 0.049391 0.070046 -0.026387 0.044501 0.18263 -0.0043773 -0.37113 -0.08894 0.15833 0.026762 0.037579 0.016822 -0.70366 0.013566 0.012866 0.030323 -0.0068186 -0.15231 -0.019734 0.14528 0.26759 -0.094085 0.027763 -0.029528 -0.9814 0.020841 -0.035405 0.042741 -0.43946 0.47954 0.07633 0 -0.2892 0.037839 0.25396 0.30272 0.013907 0.015109 0.051292 -0.00054197 0.0031633 -0.065915 0.11022 0.014814 0 0.01426 0.019602 -0.058654 0.025348 0.71386 0 -0.33065 0.0062244 -0.454 0.013372 -0.1784 0.0033688 0.23746 -0.013781 0.53741 -0.4398 -0.062816 -0.22774 0.20411 -0.1565 -0.084971 -0.57261 0 -0.086678 -0.057048 -0.019233 0.0068767 -0.39292 0 -0.31163 -0.12727 -0.022151 -0.13626 -0.31476 -0.15285 0.022321 -0.17516 0.12697 -0.26723 -0.14233 Deletion Peak 4 - CN values 3p24.1 chr3:27833851-28368392(probes 36810:36862) chr3:28223445-28368392(probes 36849:36862) chr3:28263403-28319225(probes 36853:36854) 0.017163 0.056628 Actual Copy Change Given -0.43898 -0.3701 -0.22979 -0.18113 -0.25774 -0.076438 -0.15846 -0.66905 -0.61869 -0.27845 -0.2322 0.067121 -0.17176 -0.14066 -0.41441 -0.26611 0.051926 0.0034701 -0.23113 -0.23815 -0.26172 -0.16813 -0.054389 -0.21014 -0.20757 0.48239 -0.15561 -0.69432 -0.10177 -0.46056 -0.028102 -0.055341 -0.036939 0.01307 0.13731 -0.13598 -0.28649 -0.31506 -0.19921 0.024272 -0.70129 -0.34357 -0.40576 -0.41997 -0.14152 0.034913 -0.063803 -0.20287 -0.16373 -0.42031 -0.15477 -0.67295 -0.97714 0.016638 -0.27263 -0.051689 -0.43116 -0.456 -0.11553 -0.13823 0.0049802 -0.25698 0.0058907 -0.28475 -0.37686 -0.25394 -0.08507 -0.015414 -0.26006 -0.048268 -0.0067592 -0.54384 -0.015252 -0.40748 -0.21526 -0.13624 -0.17513 -0.40357 -0.14218 0.026408 -0.2782 -0.42762 -0.64317 -0.43896 -0.19094 -0.32142 -0.10409 0.074324 -0.076626 -0.39 -0.57975 -0.8073 -1.2929 -0.070334 -0.55072 -0.013325 -0.13965 -0.028657 -0.2434 -0.53894 -0.32903 -0.082731 0.46799 -0.10748 -0.48346 -0.15967 0.46067 -0.11893 -0.15824 -0.27255 -0.12676 -0.24343 -0.12077 Deletion Peak 5 - CN values 3p12.1 chr3:79125560-86954382(probes 40907:40962) chr3:81761355-86954382(probes 40932:40962) chr3:44646548-94044428(probes 38031:41099) 1.2875e-07 1.0285e-06 Actual Copy Change Given -0.43898 -0.3701 -0.22979 -0.18113 -0.25774 -0.076438 -0.15846 -0.66905 -0.61869 -0.27845 -0.2322 0.36362 0.044847 0.032495 1.2377 -0.26611 -0.082489 0.0034701 -0.23113 -0.23815 -0.26172 -0.16813 -0.054389 -0.21014 -0.20757 -0.47334 -0.15561 -0.69432 -0.10177 -1.2929 -0.38369 -0.055341 -0.036939 -0.62431 0.50951 -0.11313 -0.28649 -0.31506 -0.19921 -0.60048 -0.70129 -0.34357 -0.40576 -0.41997 -0.14152 -0.54931 -0.063803 -0.20287 -0.47781 -0.42031 -0.15477 -0.65961 -0.46157 0.016638 -0.27263 -0.051689 -0.43116 -0.456 -0.11553 -0.13823 0.0049802 -0.25698 0.0058907 0.027367 0.00017329 -0.25394 -0.08507 -0.13291 0.17987 -0.048268 -0.0067592 -0.55828 -0.015252 -0.40748 -0.21526 -0.13624 -0.17513 -0.37304 -0.14218 -0.34906 -0.2782 -0.42762 -0.63091 -0.23528 -0.19094 -0.32142 -0.014268 -0.79331 -0.38836 -0.39 -0.10243 -0.8073 -0.16589 -0.070334 -0.55977 -0.55423 -0.13965 0.38413 -0.2434 -0.53894 -0.32903 -0.082731 0.46799 -0.10748 -0.4752 0 -1.1084 -0.11893 0.1676 -0.27255 -0.12676 -0.24343 -0.12077 Deletion Peak 6 - CN values 4p14 chr4:31123269-36258126(probes 49180:49205) chr4:31133070-36258126(probes 49181:49205) chr4:1-42599040(probes 47241:49765) 5.8292e-05 5.8743e-05 Actual Copy Change Given -0.078115 0.308 -0.1831 0.15963 -0.056582 -0.059397 -0.17495 -0.0040051 -0.032986 -0.34021 -0.25189 -0.034588 -0.16872 -0.012261 -0.83557 -0.015442 -0.12627 -0.0063129 -0.0024065 -0.22052 -0.13297 -0.051775 -0.27872 -0.57936 -0.15198 -0.075231 -0.21019 -0.729 -0.11242 -0.69388 -0.31882 -0.0046968 -0.25612 0 -0.65199 0.0026135 -0.035198 -0.026105 -0.20245 1.1501 0.017408 -0.35202 -0.25594 -0.41995 0.12856 -0.49755 -0.43852 0.0014603 -0.26479 -0.45728 0.056307 -0.72689 -0.47308 -0.015951 -0.28952 0.01324 -0.034505 -0.43807 -0.1262 0.12495 -0.17164 -0.27411 -0.0019233 -0.26362 -0.37273 -0.25362 -0.084007 -0.13985 -0.018703 -0.0050287 0.081055 -0.20403 0.027014 -0.072521 -0.21105 -0.087557 -0.087453 -0.402 -0.17497 -0.34846 -0.31356 -0.44666 -0.65429 -0.1472 -0.20193 -0.35109 -0.25201 -0.060808 -0.14033 -0.41919 -1.0121 -1.2929 -0.17694 -0.043196 -0.57987 -0.033692 -0.32069 -0.03401 -0.26643 -0.041907 -0.29264 -0.0046954 -0.23812 -0.139 -0.46236 -0.20391 -0.94292 -0.17178 -0.09981 -0.29969 0.022491 0.19096 -0.062108 Deletion Peak 7 - CN values 4q13.3 chr4:57091204-190214555(probes 50389:60250) chr4:70158923-70353466(probes 50685:50703) chr4:70197253-70211791(probes 50688:50689) 0.032985 0.18198 Actual Copy Change Given -0.0054228 -0.003042 -0.1831 0.15963 -0.056582 -0.059397 -0.17495 1.9222 -0.032986 -0.10942 -0.25189 -0.18957 -0.16872 -0.012261 0.10913 -0.015442 -0.15744 -0.0063129 -0.0024065 -0.22052 -0.13297 -0.051775 -0.029634 0.11459 -0.15198 -0.075231 -0.21019 -0.729 0.067574 -0.41045 -0.31882 -0.0046968 -0.037748 0 -0.079539 -0.12763 -0.29256 -0.026105 0 -0.62685 0.029709 0 -0.40109 -0.41995 -0.15238 -0.49755 -0.017173 0.0014603 -0.26479 -0.45728 0.056307 -0.72613 -0.476 -0.015951 0.8197 0.01324 -0.034505 -0.18801 -0.1262 -0.14014 0 -0.27411 0.23421 -0.26362 -0.0065492 -0.25362 -0.099525 -0.13985 -0.018703 -0.0050287 -0.10057 -0.55017 0.027014 -0.072521 0 -0.087557 -0.087453 -0.048034 -0.17497 -0.34846 -0.31356 -0.46793 -0.65429 -1.2929 -0.20193 -0.35109 -0.10676 -0.75204 0.1268 0.16172 -1.2414 -0.82613 -0.068612 -0.043196 -0.57987 -0.033692 -0.11963 -0.03401 0.1194 -0.54137 -0.36155 -0.0046954 -0.23812 0.28451 -0.46236 0.14066 -0.49298 -0.17178 -0.09981 -0.28948 0.84515 -0.26022 -0.062108 Deletion Peak 8 - CN values 4q35.2 chr4:169701596-190214555(probes 58970:60250) chr4:186456231-190214555(probes 60235:60250) chr4:92590309-190214555(probes 52499:60250) 4.5633e-06 0.00018825 Actual Copy Change Given -0.066343 -0.35669 -0.1831 0.15963 -0.27118 -0.24613 -0.17495 -0.67716 -0.032986 -0.60053 -0.25189 -0.18957 -0.16872 -0.012261 -0.44622 -0.015442 -0.17945 -0.0063129 -0.0024065 -0.22052 -0.13297 -0.051775 -0.029634 -0.58198 -0.15198 -0.076576 -0.21019 -0.729 -0.12324 -0.443 -0.34665 -0.0046968 -0.28985 -0.32297 -0.43551 -0.12763 -0.29256 -0.026105 0 -0.64459 -0.70135 0 -0.40109 -0.41995 -0.15238 -0.49755 -0.4414 0.0014603 -0.26479 -0.45728 0.056307 -0.2319 -0.476 -0.015951 -0.89267 0.01324 -0.034505 -0.18801 -0.1262 -0.14014 0 -0.27411 -0.043591 0 -0.039449 -0.53161 -0.10346 -0.13985 -0.018703 0.10142 -0.11553 -0.55017 0.027014 -0.33737 0 -0.087557 -0.20167 -0.65366 -0.17497 -0.33089 -0.31356 -0.46793 -0.65429 -0.14036 -0.20193 -0.35109 -0.10676 -0.60306 -0.74596 -0.17521 -0.18076 -0.8166 -0.068612 -0.043196 -0.57987 -0.033692 0 -0.03401 -0.070109 -0.55191 -0.36155 -0.0046954 -0.23812 -0.14049 -0.46236 -0.37587 -0.57109 -0.17178 -0.09981 -0.28948 -0.133 -0.26022 -0.11937 Deletion Peak 9 - CN values 5q15 chr5:44388705-181538259(probes 62332:73597) chr5:94598877-94708799(probes 65826:65836) chr5:83539985-96824006(probes 64759:66048) 0.044031 0.044031 Actual Copy Change Given -0.59532 -0.37357 -0.090075 -0.18084 -0.24166 -0.14249 -0.16752 -0.65375 -0.65627 -0.03247 -0.24276 -0.13141 -0.13795 -0.0044921 -0.40578 -0.27319 -0.15814 0.075468 -0.011599 -0.23465 -0.28765 -0.18068 -0.27616 -0.21803 -0.16341 -0.49617 -0.18538 -0.73048 -0.10467 -0.46349 -0.38865 -0.012441 -0.1377 -0.63447 -0.38372 -0.18233 -0.30275 -0.17954 -0.19818 -0.61812 -0.7019 -0.3151 -0.39935 0.0048663 -0.15508 0.25272 -0.071225 0 -0.0018706 -0.45631 -0.036953 -0.30217 -0.45628 -0.0014385 -0.29129 -0.045138 -0.48978 -0.46122 -0.15436 0.096646 -0.27 0.040744 -0.016578 -0.25304 -0.37144 -0.25071 -0.09432 -0.14751 -0.28048 0.026713 0 -0.54452 0.04102 0 -0.17638 -0.09167 -0.19731 -0.40234 -0.017861 -0.33121 -0.29812 -0.45291 -0.64895 -0.090997 -0.19402 -0.32626 -0.11757 -0.7861 -0.472 0.3575 0 -0.81612 -0.15807 -0.0093618 -0.58171 -0.57554 -0.43319 -0.097784 -0.2479 -0.54003 -0.52978 0.016937 -0.3278 -0.10125 0 -0.2041 0.0026746 -0.16301 -0.1642 -0.39643 -0.12338 -0.26345 -0.14083 Deletion Peak 10 - CN values 6q16.1 chr6:96211270-96808369(probes 79651:79693) chr6:96551817-96808369(probes 79689:79693) chr6:96609694-96808369(probes 79692:79693) 0.00033539 0.00032456 Actual Copy Change Given -0.10676 0.00058649 -0.3582 -0.012374 -0.12748 -0.002329 0.0040549 0.63959 0.10156 0.17418 0.10522 -0.011894 0.051515 -0.041594 0 0.0011274 -0.11359 -0.017585 -0.25091 0.15664 -0.111 0.050119 -0.022169 0.067435 0 0.034003 -0.23463 -0.73179 0.038889 -0.50613 -0.33946 -0.005214 -0.030808 0.24821 0.020761 0.067921 -0.0097109 0 -0.1958 0.44591 0 -0.0016878 -0.0028759 -0.42245 -0.0073173 -0.10439 0 0.12124 -0.13065 -0.38702 -0.16259 -0.4396 -0.4015 0.0099143 -0.1558 0.019658 -0.29335 -0.46376 -0.059552 0.0454 0.34246 0 -0.29118 -0.34522 -0.0062093 -0.0043762 0.067762 -0.11838 -0.25221 -0.1055 0.072353 0.009151 -0.033699 -0.017459 -0.19185 0.074281 -0.18925 0.22757 0.18604 -0.70573 -0.0048503 -0.064286 0.035027 0.077613 0.0078507 -0.18297 -0.11251 -0.19835 -0.090877 -0.42176 -0.020064 0.18105 0.34132 -0.06621 0.41142 0.53561 -0.10323 0.19463 -0.056396 -0.0069899 0.35609 -0.027879 -0.32885 -0.11601 -0.33789 0.014943 -0.50509 0 0.0030883 0.081152 -0.12042 0 0 Deletion Peak 11 - CN values 7q36.3 chr7:108566078-159345973(probes 92649:96058) chr7:156936273-159345973(probes 95922:96058) chr7:156833815-159345973(probes 95911:96058) 0.2194 0.22147 Actual Copy Change Given 0.34336 -0.30186 0.22657 0.16622 0.085844 0.053376 0.0042799 0.62385 0.031794 0 0.38527 0.11177 -0.1359 -0.13689 -0.009087 -0.21754 0.67934 -0.027213 -0.0090707 0.027198 0.059331 0.054331 -0.030039 0.16295 -0.11544 -0.47741 0.40892 0.060367 0.053437 0.0094156 0.30567 -0.0057034 0.1577 -0.091975 0.040025 0.12224 0 -0.3153 0.063701 0.63691 0.0058824 -0.33726 0.0010955 0.016567 0.15719 0.35795 0.6626 0.20777 -0.23861 0.19682 -0.011265 -0.7287 -0.016081 0.0096677 0.3344 -0.0043075 0.78337 0.093158 0.048252 0.052975 0.012414 0.02911 -0.0034392 0.0083615 0 0.26096 -0.020383 0.12108 0.01257 0.76162 -0.0023595 -0.0042514 0.12055 -0.31004 0.063156 0.61718 -0.19333 -0.31169 0.11506 0.69974 -0.31917 0.24933 0.033239 -0.046399 -0.0059425 0.26168 -0.0027333 -0.77583 -0.0049692 0 0.060619 -0.9235 -0.019659 0.011841 0.42479 -0.017441 -0.061922 -0.034522 0.17572 0.18934 0.22654 0.015511 0.071525 -0.093373 -0.027677 0.017858 -0.58729 0.1282 -0.078581 -0.28959 0.033358 -0.0061554 0.11384 Deletion Peak 12 - CN values 8p21.3 chr8:1-28026172(probes 96059:97681) chr8:22817616-22930006(probes 97243:97244) chr8:1-37844037(probes 96059:98102) 1.0751e-18 1.0751e-18 Actual Copy Change Given -0.20567 -0.0013678 -0.13472 -0.17953 0 -0.09557 -0.14847 -0.030971 0 -0.38121 -0.29417 -0.14578 -0.16679 -0.1458 -0.40478 -0.27416 -0.87193 -0.0076999 0.20978 -0.16579 -0.27219 -0.17361 -0.3029 1.1647 -0.4105 -0.50278 -0.42447 -0.70365 -0.1128 0.0010667 -0.35629 -0.064017 -0.051584 -0.033946 -0.38557 -0.1829 -0.029011 -0.30181 -0.22321 -1.223 -0.66676 -0.36217 -0.41685 -0.40382 0.12714 -0.80059 -0.11191 -0.35072 0.84835 -0.75949 -0.13125 -0.74472 0.014292 0.0010317 0.012306 -0.0061775 -0.45347 -0.17416 -0.12261 -0.13661 -0.5824 -0.26991 0.013716 -0.65788 -0.38892 -0.2688 -0.088866 -0.15539 -0.28357 -0.2331 -0.22755 -0.56427 0.036736 -0.42775 -0.22544 -0.15018 -0.18405 -0.36453 0.15681 -0.71999 0.56564 -0.46894 -0.65881 -0.039835 -0.18709 -0.37124 -0.12366 -0.79859 -0.083319 -0.83323 0.23933 -0.80644 -0.18439 0.0082516 -0.28876 -0.58127 0.098755 -0.34377 -0.27965 -0.55712 -0.66566 -0.13256 -0.75027 -0.11783 -0.65334 -0.0037132 -0.57504 0.024324 -0.16555 0 -0.062263 -0.07315 -0.2538 Deletion Peak 13 - CN values 9p21.3 chr9:21427296-26109931(probes 106251:106291) chr9:21931220-21983896(probes 106271:106272) chr9:1-32437024(probes 105253:106410) 1.0612e-23 1.0612e-23 Actual Copy Change Given -1.2929 -0.37652 -0.24092 -0.16911 -0.22923 -0.087509 -0.16997 -1.2929 -1.2929 -0.88244 -0.029045 -0.19459 -0.17519 -0.15012 0.21323 0.011509 -1.2929 -0.032464 -0.035994 -0.24355 -0.27835 -0.17583 -0.29123 -0.24208 -0.15762 -0.47475 -0.2025 -1.2929 -0.13263 -1.2929 -0.36605 -0.042582 0.13311 -0.32168 0.55056 -0.14936 0.56477 -0.3306 -0.20988 -0.62122 -1.2929 -0.35149 -0.010843 -0.3655 -0.17587 -0.52259 -0.27703 -0.22793 0.00060174 -0.3172 -0.19417 -0.75609 -0.98596 0.0050219 0.0055543 -0.044091 -0.47563 -0.49014 0.032149 -0.41316 -1.0551 -0.24362 -0.0049844 -0.66023 0.0013313 -0.26209 -0.095194 -0.30112 -0.0024716 0.23347 -0.35785 -0.5511 -0.10411 -0.41044 -0.44618 -0.070291 -0.21849 -1.1843 -0.16789 -0.33812 -0.29114 -0.4985 -0.6437 -0.074636 -0.12911 -0.37035 0.072556 0.063069 -0.43183 -0.073659 -0.21332 0.69287 -0.0446 0.032019 -0.58129 0.015134 -0.44536 -0.13099 -0.7076 -0.55089 -0.35149 -0.08211 -0.61245 -0.10914 -1.2929 -0.27383 -0.54261 0.001939 -0.16559 -1.0916 -0.13042 -0.22589 -0.11625 Deletion Peak 14 - CN values 10p15.1 chr10:1-25120196(probes 113010:114775) chr10:5029609-5163897(probes 113180:113187) chr10:5068567-5107524(probes 113184:113185) 0.17879 0.18198 Actual Copy Change Given -0.41784 -0.37439 -0.38398 0.11792 0.21497 -0.031487 0.0039187 -0.00038119 0.024395 0.12925 -0.084112 0.10871 0.21293 0.0014575 -0.41245 -0.25748 -0.10457 -0.0063848 0.21587 0.018433 -0.13376 -0.0056301 -0.19843 -0.5468 -0.15429 0.037878 0.65443 -0.033116 0.15258 0.15681 0.1713 -0.01144 0.11786 -0.014055 -0.3926 0.32361 -0.021538 -0.31956 0.2536 1.072 0.0037284 0.0047481 -0.4108 0.0022526 0.14807 0.27615 -0.076366 -0.024027 0 0.89942 -0.32846 -1.2929 0.047084 -0.012566 0.57285 -0.036344 -0.42998 -0.34788 0.065629 -0.15955 -0.015109 -0.022501 0.47795 -0.31064 -0.007664 -0.024664 -0.090007 0.11683 -0.026702 0.087945 -0.049704 -0.54213 -0.11621 -0.00066254 0.1362 -0.0067537 0.18391 0.37746 0.026954 -0.7076 0.047565 -0.45591 0 0.12213 -0.0012888 -0.31292 -0.0011018 -0.10354 -0.37729 -0.35041 0.51872 -0.29491 -0.15769 0.17889 -0.050868 0.84435 -0.1305 0.015907 -0.24123 -0.023603 0.21752 -0.032523 -0.24477 -0.11331 -0.063957 -0.056528 0.53172 -0.19291 0.026146 1.3237 0.011044 -0.022309 -0.13819 Deletion Peak 15 - CN values 10q23.31 chr10:79345556-110209229(probes 118481:120793) chr10:87804631-87881151(probes 118971:118973) chr10:79445463-110130249(probes 118491:120785) 0.0012597 0.0013009 Actual Copy Change Given -0.86069 -0.36692 -0.072293 -0.15181 -0.26019 -0.031487 0.0039187 -0.00038119 0.024395 -0.028065 -0.084112 -0.03027 0.055532 0.0014575 -0.37926 -0.26819 -0.072362 -0.0063848 -0.23873 -0.23645 -0.0079139 -0.0056301 0.27081 -0.237 -0.15429 -0.41205 0.2276 -1.2929 -0.023579 -0.45247 -0.32394 -0.01144 -0.04534 -0.014055 -0.3926 -0.13777 -0.28881 -0.33001 -0.20176 -0.052628 0.0037284 0.0047481 -0.4108 0.0022526 0.0027384 -0.013019 -0.058502 -0.024027 0 0.13558 0.0086845 -1.2929 -0.45822 -0.012566 -0.29658 -0.014875 -0.036817 -0.17706 -0.1399 -0.15137 -0.13962 -0.00068887 -0.0022404 -0.29686 -0.007664 -0.23997 -0.090007 0.11683 -0.28089 -0.11566 0.080723 0.010211 -0.11621 -0.00066254 -0.21993 -0.033896 -0.015202 -0.36389 0.026954 -0.34396 0.29372 -0.43316 0 -0.024586 -0.0012888 -0.31292 -0.0011018 -0.78174 -0.063807 -0.38292 0.056119 -0.29491 -0.015673 -0.069929 -0.050868 -0.56014 -0.1305 0.015907 -0.0081611 0 -0.34923 -0.032523 0.56885 -0.11331 0.013121 -0.25802 -0.10164 -0.15877 -0.065742 -0.36265 0.011044 -0.25286 -0.13819 Deletion Peak 16 - CN values 11p15.4 chr11:1-10759220(probes 122740:123604) chr11:2983200-5068361(probes 122972:123122) chr11:1-8647461(probes 122740:123426) 0.015768 0.015924 Actual Copy Change Given 0.24919 0 0.025306 -0.0035056 -0.22771 0.24889 -0.013778 -0.67759 -0.59549 -0.29673 -0.0041739 0.086669 -0.0095454 0.11918 -0.39443 -0.26252 -0.067639 0.011181 -0.23263 -0.087938 -0.25593 0 -0.032684 0.18418 -0.17185 -0.48838 -0.12505 0.072072 -0.098046 0.013792 -0.31755 0.054776 -0.06466 -0.34039 0 -0.19114 0.3015 -0.32739 -0.053835 -0.1305 -0.68958 -0.35612 -0.0017751 -0.16897 -0.1417 -0.57404 -0.0061885 0.15508 0.032073 0.15816 0 0 -0.43098 0.0033785 -0.08852 0.0017225 -0.47022 -0.2963 -0.050577 0.074676 0.012424 -0.050385 -0.0046415 0.018828 0.00061422 -0.0055665 -0.0080685 -0.14644 -0.27258 0 0.1313 -0.0087276 -0.028053 0.010859 -0.21752 0 -0.22295 -0.26381 0.060924 -0.35775 -0.30301 -0.056299 -0.64566 0.10879 0.012354 0.23892 0.029161 -0.32176 -0.48501 0.38864 -0.32825 -0.8191 0.12959 0 -0.56399 -0.0045585 -0.25856 -0.046842 0.0089895 -0.048322 -0.3344 0.014433 -0.32253 0.15942 -0.35584 -0.1972 -0.55558 0.035113 0.0042077 0.023854 0.1202 -0.015233 0.19982 Deletion Peak 17 - CN values 11q22.1 chr11:78554852-135086622(probes 128098:131922) chr11:96382281-100697467(probes 129075:129121) chr11:92832032-135086622(probes 128786:131922) 0.009789 0.010238 Actual Copy Change Given 0.20952 0 -0.16743 -0.0035056 -0.21632 0.076552 -0.013778 0.0033382 0.061415 0.0053152 -0.0041739 -0.11701 -0.15556 0.11918 -0.38703 0.010966 -0.057456 0.20222 0.22595 0.013201 0.15567 0 0 0.18418 -0.13448 -0.46305 0 -0.54799 -0.14868 -0.27184 0.13045 0.054776 0 -0.32657 0 0.15481 0.3015 0.022972 -0.053835 -0.14677 0.0070061 0.01281 -0.0017751 -0.027055 0.0051081 -0.53644 -0.078801 -0.22142 0.16756 0 -0.0023096 0 0 0.0033785 -0.14551 0.0017225 0.39118 -0.11105 0.011664 0.074676 0.064746 -0.048349 -0.0046415 0.040145 -0.38159 -0.0055665 -0.0080685 0 -0.0013803 0.39849 -0.014075 -0.0046996 0.096734 -0.41623 -0.21694 0 0 0.46138 0.060924 -0.35838 0.087779 -0.13238 0.046239 -0.25221 0.012354 -0.34277 -0.13373 -0.78432 -0.34436 -0.44212 -0.53654 0.18954 0.29961 0 -0.013497 -0.22589 0.46455 0.45902 -0.16115 -0.040542 0.34225 0.014433 0.18271 -0.11485 -0.14678 -0.18792 -0.5388 -0.15065 0.0042077 -0.035884 0.12827 -0.015233 0.00016359 Deletion Peak 18 - CN values 13q14.2 chr13:43777504-72736067(probes 143374:144778) chr13:48372364-48462011(probes 143694:143697) chr13:27793971-109038571(probes 142063:146992) 2.7832e-06 0.00027066 Actual Copy Change Given -0.07805 -0.37021 -0.40499 -0.16974 -0.24934 -0.23832 -0.16724 -0.66309 -0.6638 -0.32277 -0.056162 -0.16186 -0.10245 -0.004813 -0.41635 -0.27775 -0.91452 -0.036483 -0.017972 -0.24231 0.030993 -0.18239 -0.28488 -0.24674 -0.53621 -0.50591 -0.21178 0 -0.13281 -0.42465 -0.21578 -0.077475 -0.056679 -0.36379 -0.36151 -0.14922 -0.60579 -0.32831 -0.044033 -1.2284 -0.70952 -0.3786 -0.41036 -0.39549 -0.059604 -0.10002 0.35433 -0.25561 -0.53377 -0.12733 -0.23478 -0.73423 -0.45607 -0.02381 0.0001012 -0.041378 -0.46826 -0.4638 -0.15584 -0.099862 -0.52695 -0.27512 -0.034927 -0.33349 -0.0167 -0.24641 -0.12385 -0.037304 -0.29507 -0.10722 -0.098384 -0.55371 -0.042937 0.023699 -0.4116 -0.042035 -0.044892 0.50704 -0.08457 0.075335 -0.032718 -0.45096 -0.66096 0.063336 -0.19016 -0.34114 -0.084304 -0.78499 -0.17194 0.050223 -0.20746 -0.83182 -0.14858 -0.082279 -0.024512 0.026813 0.069795 -0.027772 -0.26124 -0.0114 0.13114 -0.069998 -0.32713 -0.087115 -0.44207 -0.36806 0.031994 -0.22706 -0.08633 -0.25679 -0.13988 0.061592 -0.13335 Deletion Peak 19 - CN values 13q33.1 chr13:43777504-114364328(probes 143374:147299) chr13:102711371-102778381(probes 146468:146481) chr13:27793971-109038571(probes 142063:146992) 0.0011497 0.18347 Actual Copy Change Given -0.07805 0.028172 -0.40499 -0.16974 -0.24934 0.13563 0.0093502 0.023357 -0.6638 -0.32277 -0.056162 -0.16186 -0.10245 -0.004813 -0.41635 -0.017246 0.691 -0.036483 -0.017972 0.06628 0.030993 -0.18239 0.21422 -0.24674 -0.53621 -0.52306 -0.21178 0 -0.13281 -0.42465 -0.21578 -0.077475 0.12526 -0.36379 -0.36151 -0.14922 -0.31594 0.47058 -0.044033 -1.2284 -0.70952 -0.3786 -0.41036 -0.18372 -0.059604 -0.10002 0.35433 -0.037242 -0.5243 -0.12733 0.19162 -0.73423 -0.45607 -0.02381 0.0001012 -0.041378 -0.46826 -0.4638 -0.15584 -0.099862 -0.52695 -0.27512 -0.034927 0.026237 -0.0167 -0.24641 -0.12385 -0.037304 -0.29507 -0.10722 0.18776 -0.032306 -0.042937 0.023699 -0.17691 -0.042035 -0.044892 0.7474 -0.08457 0.075335 -0.032718 -0.45096 0.022709 -1.2929 -0.19016 -0.34114 -0.084304 -0.78499 -0.17194 0.050223 -1.2929 -0.83182 -0.14858 -0.082279 -0.024512 1.5933 0.76935 -0.027772 -0.26124 -0.0114 0.10503 -0.069998 -0.32713 1.5407 -0.44207 -0.36806 -0.56637 -0.22706 -0.08633 -0.31969 -0.13988 0.061592 -0.13335 Deletion Peak 20 - CN values 15q21.1 chr15:1-58989607(probes 153295:155904) chr15:44518096-45291741(probes 154756:154815) chr15:1-55520141(probes 153295:155579) 0.012086 0.012026 Actual Copy Change Given -0.058249 -0.2949 0.02938 -0.0099565 -0.0017723 -0.1134 -0.12467 -0.0039318 -0.23179 -0.024438 -0.070057 -0.012967 -0.0038945 -0.0032178 0.026938 0.014907 -0.062274 0.003634 0.23325 -0.2245 -0.1346 -0.058062 0.12746 0 0.23087 -0.55309 0.10251 -0.67537 -0.12229 -0.014322 0 0.045401 0.13085 0.29938 0.45915 0.0090674 -0.29203 -0.054826 0.051901 -0.60475 0.014937 -0.017435 0 -0.0067233 0.13117 0 -0.090656 -0.25989 -0.51747 -0.26551 -0.054466 -0.719 -0.45693 -0.0087822 0 -0.0015329 -0.44633 0.01052 -0.041272 -0.11038 -0.029076 -0.27194 0.25088 -0.29944 -0.37639 0.053057 -0.01215 0.12727 0.010481 -0.22891 -0.10418 0.0057711 -0.11658 -0.11783 -0.014673 0.008079 0.013584 -0.71452 -0.06442 -0.26992 -0.010981 0.36074 -0.63921 0.24842 -0.018681 0.012595 0.19925 0.068448 0.54858 -0.38634 -0.013604 -0.80442 -0.11186 -0.0040356 0.48881 0.016336 -0.45863 -0.036365 0.015672 0.0057795 0.11414 0.013763 -0.32125 -0.48653 0.09001 -0.35606 -0.083206 -0.17752 0.0015713 -0.28584 -0.10985 -0.021456 -0.12928 Deletion Peak 21 - CN values 16p11.2 chr16:28566968-29036734(probes 161136:161148) chr16:28576630-28620040(probes 161137:161146) chr16:28595953-28606738(probes 161139:161140) 0.056628 0.056628 Actual Copy Change Given -0.039649 -0.23452 0.2651 0.15922 0.0047676 -0.10807 0.0059143 0.0098029 -0.10889 0.1564 0.051144 0.12256 -0.034168 0.0053346 -0.35587 0.015213 -0.064942 0.0076781 0.18046 0.032305 0.16088 -1.0761 -0.0014717 -0.2297 0.59164 -0.47928 -0.079525 -0.68955 0 0 -0.28676 0.0015644 -0.094684 -0.31358 0.0028287 0.15184 0.020974 -0.2901 0.014953 0.63316 -0.0043925 0.021007 0.0029605 0.026852 -0.0083184 0.23026 0.30904 0.088304 0.054666 -0.090526 0.27064 0.09502 0.025729 -0.012343 -0.07084 0.01543 0.017962 0.18019 0 -0.1182 3.6569 0.064896 0.011977 0.66395 0.0022942 0.25988 0.032243 0.0072398 -0.20721 0.022695 -0.013851 -0.0051753 -0.041849 -1.197 -0.21409 0.098034 0.0069477 -0.15187 -0.11818 0.019361 0.012832 0.0016684 -0.62457 0.010085 -0.015418 -0.31063 -0.12201 0.068622 0.19645 -0.38836 0.23404 -0.40269 -0.049866 0.0012841 0.84235 0.024715 -0.044426 0 -0.013012 0.011981 0.055434 0.015602 -1.2929 0.63051 0.073378 0.16395 0.30817 2.4774 -0.082396 -0.10831 0.12304 0.23731 0.0080845 Deletion Peak 22 - CN values 16q23.3 chr16:75656400-90338345(probes 163420:164285) chr16:80995165-86355715(probes 163746:164087) chr16:77291501-89270246(probes 163526:164279) 0.067136 0.066482 Actual Copy Change Given -0.46461 0.0065373 0 0.15922 -0.23575 -0.069536 0.0059143 0.0098029 -0.60233 1.0367 0.051144 -0.12391 -0.034168 0.0053346 -0.35587 -0.25728 1.6159 0.0076781 0.18046 0.0577 0.045933 0.006173 -0.0014717 -0.2297 0.58287 -0.47928 -0.079525 -0.68955 0 -0.473 0.26363 0.0015644 -0.094684 -0.31358 -0.35682 -0.12834 -0.26288 0.020683 -0.17182 -0.0075086 -0.0043925 0.021007 -0.41034 0.026852 -0.0083184 -0.13747 0.69318 -0.21473 0.054666 -0.090526 0.27777 0.09502 -0.9742 -0.012343 -0.24256 0.01543 0.017962 0.22273 0 -0.1182 -0.26993 0.064896 0.011977 -0.24107 0.0022942 0.25988 0.032243 0.0072398 -0.20721 -0.16551 -0.013851 0.53721 -0.041849 0.0027537 0.16786 -0.064981 0.0069477 0.069861 -0.11818 -0.34076 0.008065 -0.49917 -0.32384 -0.024377 -0.015418 -0.31063 0.13058 -0.77626 -0.33897 -0.38836 -0.0073491 -0.40269 -0.049866 0.0012841 0.14172 -0.56093 0.25033 -0.33995 -0.49921 -0.54048 0.09228 0.015602 -0.21303 0.63051 0.10435 -0.17745 0.30817 -0.1114 0.013169 -0.10831 -0.0007346 0.23731 -0.10396 Deletion Peak 23 - CN values 18q23 chr18:46891077-80373285(probes 172020:174176) chr18:77239024-80373285(probes 174136:174176) chr18:47035287-80373285(probes 172026:174176) 0.0010783 0.0010599 Actual Copy Change Given 0.32485 -0.37551 -0.32262 0.14093 -0.0023027 -0.17703 -0.030258 -0.011545 -0.020433 -0.26822 0.075145 0.14401 0.010279 0.0074179 0.37154 0.0012356 -0.13552 -0.008179 -0.27853 0 -0.26811 0.029137 -0.0054158 -0.10217 -0.13948 -0.021315 -0.21014 -0.72826 -0.23644 -0.12749 -0.42965 -0.046611 -0.031063 0.70057 -0.0060351 -0.15068 0.5025 -0.31347 -0.096639 -0.62085 -0.69532 -0.0077523 0.022014 -0.40818 0.14474 -0.18909 0.84469 -0.11937 -0.36744 -0.1121 -0.12605 0.082735 0.026026 0.014217 0.077102 -0.0027541 -0.48143 -0.45242 -0.093486 -0.015898 0.022692 -0.27148 -0.0056301 -0.34523 -0.37216 0.27747 0.025958 0.0098837 -0.0018983 -0.24192 -0.14649 -0.55819 -0.029293 -0.41569 -0.21782 -0.073158 -0.25331 0.077744 -0.13253 -0.72417 0 -0.88489 -0.65684 -0.30518 -0.0014094 -0.37299 -0.23298 0.16848 -0.061506 -0.44013 -0.005131 0.23198 0.16173 0.01545 -0.042893 1.1336 -0.44977 -0.31624 -0.28643 0.51168 -0.048039 -0.06505 0.18374 0.5463 0.10332 -0.16488 -0.56983 0.056993 -0.098565 0.086068 -0.057222 -0.27503 -0.010847 Deletion Peak 24 - CN values 19p13.2 chr19:1-29526562(probes 174177:176276) chr19:8836946-8998419(probes 174981:175010) chr19:8935867-8958474(probes 174995:174999) 0.16638 0.17026 Actual Copy Change Given -0.40571 -0.37945 -0.058068 -0.18609 0.040509 -0.097992 -0.0014246 0.0075793 -0.57273 -0.26548 0.051916 0.153 -0.16928 -0.0081749 0.0085425 0.0051234 -0.028102 0.018454 0.018929 -0.5193 -0.25624 -0.0047092 -0.0091562 0.23999 -0.065522 0.069084 -0.083121 0.12806 -0.11252 -0.51217 -0.30978 -0.03354 0.13722 0.026188 0.30552 0.061081 -0.28259 -0.31947 0.064232 0.46491 0.0087653 -0.33097 0.01426 0.015748 -0.1503 0.1844 -0.074233 -0.25714 -0.2129 0.016009 -0.15608 0.052033 0.57562 0.0021499 0.20556 0 -0.44255 0 -0.13597 0.1045 0.016214 0.085605 0.031526 -0.64128 0.00057955 -0.27045 0.071881 -0.0055914 -0.22234 -0.11216 -0.035142 -0.015469 0.0019751 0.0064511 0.16425 -0.14763 -0.21536 -0.35244 -0.1485 0.72208 0.015573 -0.014035 -0.61289 -0.61973 0.016635 0.30791 0.069201 0.05322 0.86249 0.0068058 0.51871 -0.79483 -0.068276 0.016365 0.019393 0.038692 -0.24769 -0.043817 0.17545 -0.037089 -0.0019731 -0.080071 -0.24128 0.10705 -0.42189 -0.0069015 0.00071546 0.23948 -0.089127 -0.28977 -0.1143 -0.02575 0.052632 Deletion Peak 25 - CN values 19q13.32 chr19:38191770-58617616(probes 177017:178690) chr19:46327572-47284644(probes 177717:177814) chr19:45228289-47293673(probes 177618:177815) 0.13626 0.13259 Actual Copy Change Given 0.4886 0.078375 0.20634 0.16961 0.00049081 -0.11458 -0.0014246 0.0075793 -0.58153 0.05311 -0.23829 -0.13811 0.013565 -0.0081749 0.0014117 0.0051234 0.039091 0.018454 -0.20895 0.037717 0.23438 -0.0047092 0.42331 -0.24236 0.11971 0.069084 -0.083121 -0.68585 0.17083 0.39276 0.17135 0.065291 0.51165 -0.25547 0.25708 0.061081 0.26573 1.2477e-05 -0.16567 -0.05374 -0.71023 -0.01112 0.01426 -0.39162 -0.017085 -0.48546 0.53212 0.094911 -0.10526 -0.46891 0.13744 -0.62892 0.052549 0.0021499 0.25668 0 -0.094517 0.1184 0.070322 0.1045 0.016214 0.085605 0.031526 -0.2915 0.64699 0.25156 0.071881 -0.0055914 0.027294 -0.21238 -0.035142 -0.01819 0.0019751 0.0064511 0.16425 -0.14556 -0.039887 -0.31975 0.16923 -0.3602 0.0052776 0.38349 -0.62021 -0.1212 0.0049159 -0.23773 -0.0022113 -0.80381 -0.39016 -0.4283 0.076771 -0.29758 0.038551 0.016365 0.019393 0.57622 0.20325 0.026505 0.17545 -0.037089 -0.0019731 0.042957 0 0.2802 0.37157 -0.1723 -0.52875 0.013602 -0.089127 0.52642 0.12642 0.46288 0.15307 Deletion Peak 26 - CN values 21q22.3 chr21:43982133-46709983(probes 184468:184635) chr21:44539209-44612901(probes 184505:184514) chr21:44094256-46709983(probes 184481:184635) 0.012207 0.012026 Actual Copy Change Given -0.36306 -0.019563 -0.21318 -0.33211 0.15914 -0.064154 -0.011736 -0.1921 -0.48068 -0.28552 -0.22897 -0.011864 -0.040535 0.041904 -0.40362 -0.0018471 -0.052527 -0.28821 0.17453 -0.23742 -0.16092 0.0013341 -0.16838 -0.57736 -0.16332 -0.22646 -0.13067 -0.6884 -0.12375 -0.43827 -0.30399 0.055792 -0.046716 -0.073321 -0.37329 -0.043584 -0.0065989 0.0089421 -0.14438 -0.10124 -0.28869 -0.34983 0.0044966 -0.0006071 0.14641 -0.17023 -0.063448 0.013068 -0.24543 -0.083719 -0.33686 -0.8872 0.0091092 0.014086 -0.26991 -0.030921 0.053837 -0.17667 -0.15475 -0.042171 -0.26663 -0.062327 0.048832 -0.30863 -0.38874 -0.25919 0.014905 -0.097705 0.0023636 -0.046752 -0.11717 -0.56233 -0.059292 -0.40528 -0.20382 -0.29383 -0.21427 0.088372 -0.16481 -0.35383 -0.63753 -0.42426 -0.63694 -0.12567 0.0036826 -0.2937 -0.11485 0.069719 -0.040396 -0.00014556 -0.37199 -0.8163 0.034954 -0.011322 -0.038367 -0.010863 -0.13142 -0.056349 -0.24331 -0.48765 -0.14036 -0.032019 0.86213 -0.11048 0.13049 -4.1589e-06 -0.013333 -0.47214 -0.07775 -0.29003 -0.0079539 -0.010878 -0.011064