index chromosome region_start region_end peak_start peak_end enlarged_peak_start enlarged_peak_end n_genes_in_region genes_in_region n_genes_in_peak genes_in_peak n_genes_on_chip genes_on_chip top 3 1 1 149910674 154791407 150550594 150627614 119996645 154771891 281 ADAR,ARNT,BCL9,CHRNB2,CTSK,CTSS,DRD5P2,ECM1,ENSA,FCGR1A,FCGR1B,FLG,FMO5,GJA5,GJA8,IL6R,ILF2,IVL,KCNN3,LOR,MCL1,SMCP,NOTCH2,NPR1,PDZK1,PI4KB,PRKAB2,PSMB4,PSMD4,RAB13,RFX5,RNU1-4,RORC,RPS27,S100A1,S100A2,S100A3,S100A4,S100A5,S100A6,S100A7,S100A8,S100A9,S100A10,S100A11,S100A12,S100A13,SPRR1A,SPRR1B,SPRR2A,SPRR2B,SPRR2C,SPRR2D,SPRR2E,SPRR2F,SPRR2G,SPRR3,VPS72,TCHH,TPM3,TUFT1,HIST2H2AA3,HIST2H2AC,HIST2H2BE,HIST2H4A,PIP5K1A,ANXA9,ITGA10,PEX11B,SELENBP1,PRPF3,SEC22B,CHD1L,PDE4DIP,SETDB1,UBAP2L,SV2A,DENND4B,RBM8A,SF3B4,PIAS3,HAX1,SEMA6C,POLR3C,TXNIP,JTB,MTMR11,MLLT11,SLC27A3,TDRKH,CD160,CELF3,VPS45,POGZ,RPRD2,SNAPIN,CA14,NBPF14,C1orf43,CHTOP,LCE2B,RNVU1-7,RNU1-3,RNU1-2,RNU1-1,SLC39A1,RNF115,TMOD4,CERS2,CRNN,BOLA1,APH1A,PLEKHO1,ACP6,GPR89B,OAZ3,MRPS21,ADAMTSL4,CRCT1,C1orf56,GOLPH3L,UBE2Q1,FAM63A,CDC42SE1,OTUD7B,PGLYRP4,ATP8B2,LINC00869,S100A14,GATAD2B,CGN,ZNF687,PRUNE1,MRPL9,INTS3,SCNM1,TNFAIP8L2,C1orf54,TARS2,SNX27,ANP32E,HORMAD1,POLR3GL,LCE3D,AQP10,NUP210L,PGLYRP3,GNRHR2,THEM4,GABPB2,TCHHL1,RPTN,TDRD10,SHE,LIX1L,S100A16,CREB3L4,CIART,HFE2,ANKRD35,NBPF12,LELP1,BNIPL,SPRR4,NUDT4P2,PDIA3P1,LCE4A,NBPF11,NUDT17,CRTC2,LCE5A,RIIAD1,THEM5,NBPF15,ANKRD34A,HIST2H2AB,HIST2H3A,HIST2H2BC,HIST2H2BA,S100A7A,LINGO4,FLG-AS1,LOC343052,LCE1A,LCE1B,LCE1C,LCE1D,LCE1E,LCE1F,LCE2A,LCE2C,LCE2D,LCE3A,LCE3B,LCE3C,LCE3E,NOTCH2NL,LINC01138,LOC388692,LYSMD1,HRNR,FLG2,C1orf189,NBPF9,NUDT4P1,HIST2H2BF,NBPF18P,KPRP,LCE6A,FAM72C,ADAMTSL4-AS1,PRR9,PPIAL4G,FAM231D,NBPF13P,PPIAL4D,LOC645166,S100A7L2,EMBP1,SRGAP2B,SRGAP2C,PPIAL4A,GPR89A,PPIAL4C,HIST2H3D,FAM72B,MIR554,FAM72D,NBPF8,LINC00623,LOC728989,PPIAL4E,PFN1P2,PDZK1P1,MIR190B,C1orf68,LOC100131107,LOC100132057,LOC100132111,NBPF10,FCGR1CP,C2CD4D,NBPF20,HYDIN2,LINC00624,MIR4257,LOC100505824,LOC100507670,TNFAIP8L2-SCNM1,MIR5698,MIR5087,SRGAP2-AS1,FALEC,UBE2Q1-AS1,SRGAP2D,RNVU1-8,LOC101927429,LOC101927468,GBAT2,LOC101928009,LOC101928034,LOC101928979,NBPF25P,LOC101929798,RNVU1-4,RNVU1-14,RNVU1-15,RNVU1-20,RNVU1-17,RNVU1-3,RNVU1-1,RNVU1-6,RNVU1-19,MIR6737,MIR6878,MIR6736,MIR6077,MIR8083,CH17-408M7.1,LOC103091866,LOC105371433, 7 ECM1,ENSA,MCL1,ADAMTSL4,ADAMTSL4-AS1,MIR4257,FALEC, 2 2 60452544 61836131 60452544 61825826 3767900 88525623 637 ACTG2,ACYP2,ADCY3,ADD2,ALK,ANXA4,APOB,RHOB,ATP6V1B1,AUP1,BCYRN1,ZFP36L2,CAD,CALM2,CAPG,CD8A,CD8B,CENPA,CTNNA2,CYP1B1,DCTN1,DDX1,DGUOK,DHFRP3,DNAH6,DNMT3A,DOK1,DTNB,E2F6,EGR4,EMX1,EPAS1,FABP1,EFEMP1,FKBP1B,FOSL2,FSHR,FTH1P3,GCKR,GFPT1,GGCX,MSH6,GTF3C2,HADHA,HADHB,HK2,TLX2,HPCAL1,FOXN2,ID2,KCNF1,KCNK3,KCNS3,KHK,KIF3C,LHCGR,LTBP1,EPCAM,MXD1,MAT2A,MATN3,MDH1,MEIS1,MPV17,MSH2,MTIF2,MYCN,ODC1,OTX1,REG3A,PCBP1,PEX13,VIT,PIGF,PLEK,PLGLB2,PLGLB1,POMC,PPM1B,PPM1G,PPP1CB,PPP3R1,PRKCE,EIF2AK2,RAB1A,REL,REG1A,REG1B,REG1CP,RPS27A,RRM2,RTKN,SDC1,SRSF7,SFTPB,SIX3,SLC1A4,SLC3A1,SLC8A1,SNRPG,SOS1,SOX11,SPAST,SPR,SPTBN1,SRD5A2,STRN,ADAM17,TACR1,GCFC2,TGFA,TIA1,UCN,UGP2,VRK2,VSNL1,XDH,XPO1,SLC30A3,ALMS1,MOGS,RNF103,DYSF,DUSP11,KLF11,MAP4K3,NCOA1,VAMP8,SUCLG1,ASAP2,ST3GAL5,SLC5A6,EIF2B4,TAF1B,NAT8,COX7A2L,TMSB10,ITGB1BP1,NRXN1,OTOF,CRIPT,ROCK2,TP53I3,MRPL33,BRE,PREPL,FEZ2,SOCS5,GREB1,USP34,LAPTM4A,RNF144A,SNX17,SERTAD2,MRPL19,SUPT7L,ARHGAP25,ACTR2,PREB,LRPPRC,PDIA6,CEBPZ,MPHOSPH10,SMYD5,MYCNOS,C1D,SEMA4F,CCT7,CCT4,GNLY,CDC42EP3,STAMBP,TGOLN2,CGREF1,B3GNT2,USP39,SIX2,VAMP5,MTHFD2,PROKR1,RAB10,GPR75,YWHAQ,IMMT,SNRNP27,GTF2A1L,STON1,EMILIN1,GPN1,AAK1,MAPRE3,SLC4A1AP,EFR3B,WDR43,LPIN1,CEP68,PSME4,EXOC6B,EHBP1,PUM2,RHOQ,HAAO,WBP1,NTSR2,PRKD3,RASGRP3,QPCT,VAX2,POLR1A,CNRIP1,FAM98A,RAB11FIP5,IFT172,SNORD53,NFU1,ERLEC1,BMP10,ZNF638,HTRA2,EML4,TRIB2,LGALSL,GRHL1,NRBP1,EHD3,CD207,ITSN2,TPRKB,WDPCP,MEMO1,ASB3,CRIM1,RNF181,DNAJC27,KRCC1,MRPL35,ATRAID,PCYOX1,NAT8B,VPS54,NBAS,DYNC2LI1,SF3B6,YPEL5,CHMP3,CPSF3,BCL11A,ATAD2B,ETAA1,HEATR5B,AFTPH,TMEM214,RETSAT,SLC35F6,C2orf42,TRMT61B,PTCD3,FANCL,SRBD1,MOB1A,ASXL2,THNSL2,NDUFAF7,NAGK,TTC27,SLC30A6,CCDC88A,KDM3A,GKN1,CYP26B1,POLE4,KCNK12,KCMF1,DPYSL5,PNO1,RPL23AP32,RTN4,TRIM54,PELI1,TTC7A,PPP4R3B,BIRC6,KIDINS220,MTA3,WDR35,RDH14,SLC4A5,NLRC4,AGBL5,LDAH,THADA,RBKS,ATL2,ABCG5,ABCG8,HS1BP3,GMCL1,TTC31,RMND5A,FNDC4,PAPOLG,REEP1,CENPO,OR7E91P,GALNT14,CCDC121,SMC6,CLIP4,CAMKMT,GEMIN6,NOL10,ANKRD53,LRRTM4,FBXO11,WDCP,THUMPD2,FAM49A,LBH,TCF7L1,INO80B,WDR54,FAM161A,EVA1A,ANTXR1,ELMOD3,C2orf16,YIPF4,PRADC1,ZNF512,KIAA1841,DPY30,MCEE,LOXL3,ABHD1,PCGF1,CCDC142,FAM136A,ATOH8,EPT1,LBX2,PNPT1,MCFD2,ATP6V1E2,LOC90784,DHX57,PKDCC,RSAD2,CAPN13,DRC1,HNRNPLL,NT5C1B,SFXN5,LINC00152,CFAP36,TEX261,CCDC85A,KLHL29,WDR92,MRPL53,PPP1R21,TRABD2A,TMEM150A,CMPK2,MBOAT2,C2orf73,CIB4,REG3G,CLHC1,PLEKHH2,OSR1,TTC32,ZNF513,GALM,TMEM178A,C2orf50,PQLC3,AHSA2,M1AP,SMYD1,LINC01105,COMMD1,FBXO41,TCF23,GAREM2,PUS10,LINC00309,PLB1,MYADML,FAM84A,RMDN2,GDF7,ASPRV1,LBX2-AS1,ADGRF3,OXER1,FAM179A,UBXN2A,CLEC4F,DQX1,KCNG3,CYS1,ALMS1P1,TET3,GKN2,TEX37,APLF,KRTCAP3,TMEM17,SPRED2,SPDYA,ATP6V1C2,LCLAT1,GPATCH11,SH2D6,LOC284950,LOC285043,LINC00486,C2orf61,LOC285074,DNAJC5G,IAH1,FLJ33534,CYP1B1-AS1,STON1-GTF2A1L,C2orf70,PRR30,LINC00298,LINC00299,LOC339803,C2orf74,LOC339807,MSGN1,FIGLA,NOTO,FOXI3,CDKL4,PRORSD1P,LRRTM1,GEN1,C2orf48,PFN4,FAM228B,LOC375196,RNF144A-AS1,MFSD2B,C2orf71,LOC388942,TMEM247,LINC01118,TSPYL6,C2orf78,BOLA3,C2orf81,FUNDC2P2,C2orf68,PTRHD1,SULT6B1,LOC400940,LINC00487,LINC01376,LINC00954,C2orf91,LINC01121,EML6,LINC01122,LINC01185,LOC400958,PCBP1-AS1,PAIP2B,RGPD1,FLJ31356,MIR216A,MIR217,CAPN14,CHAC2,FBXO48,HCG2040054,LOC644838,LOC645949,FAM228A,LOC653602,SNORD92,SNORD94,MIR558,MIR559,LINC01249,DCDC2C,LOC728730,C1GALT1C1L,LOC729348,RAD51AP2,DNAJC27-AS1,RGPD2,MORN2,LOC730100,MEIS1-AS3,SNORA36C,SNORA70B,MIR216B,SLC8A1-AS1,OST4,TDRD15,LOC100129434,LINC01126,LINC01460,LOC100132215,LOC100133985,LINC01119,DBIL5P2,SNAR-H,DCTN1-AS1,ARHGEF33,LOC100271832,ANAPC1P1,LOC100288911,MIR1301,MIR1285-2,BRE-AS1,GPR75-ASB3,SNORA80B,MIR548S,MIR4264,MIR4261,MIR4263,MIR3125,MIR4262,MIR3126,LINC00276,MIR3682,MIR3681,GTF3C2-AS1,LOC100505716,LOC100505736,CEBPZOS,LINC01304,SIX3-AS1,LOC100506142,LOC100506274,ID2-AS1,MIR3681HG,LOC100506474,LOC100507006,LOC100507073,BOLA3-AS1,LOC100507201,RNF103-CHMP3,NT5C1B-RDH14,INO80B-WBP1,MIR4430,MIR4779,MIR4765,MIR4433A,MIR4757,MIR4435-2,MIR4426,MIR4771-1,MIR4434,MIR4431,MIR4780,MIR4778,MIR4429,MIR4432,MIR548AD,MIR4435-1,PARTICL,MIR5000,MIR5192,MEIS1-AS2,AGBL5-AS1,DGUOK-AS1,LINC00570,TGFA-IT1,ALMS1-IT1,HS1BP3-IT1,LOC101060019,RMDN2-AS1,LOC101805491,LOC101926966,LOC101927043,LOC101927165,LOC101927285,LOC101927402,LOC101927438,LOC101927577,LOC101927661,LOC101927701,ATP6V1B1-AS1,LOC101927884,LOC101927907,LOC101927926,LOC101927948,LOC101927967,LOC101927987,ST3GAL5-AS1,LOC101928222,LINC01247,LOC101929452,LOC101929551,LINC00211,LOC101929567,LOC101929596,LOC101929715,LOC101929723,LOC101929733,LOC101929882,MIR7158,MIR4433B,MIR548BA,MIR8080,MIR7515,MIR6071,LOC102723362,LINC01248,LOC102723824,LOC102723854,LINC01628,LINC01291,LOC102724579,MIR7515HG,LINC01246,LOC102800447,MIR8485,MYCNUT,BIRC6-AS2,NRIR,LINC01143,LINC01317,LINC01320,MIR217HG,GACAT3,LOC105373394,LOC105374389,LOC105374596,LOC105374820,LINC01381,LINC01318,MIR4432HG, 19 PEX13,REL,XPO1,USP34,BCL11A,FANCL,PAPOLG,FAM161A,KIAA1841,AHSA2,PUS10,LOC339803,C2orf74,LINC01122,LINC01185,SNORA70B,MIR4432,LOC101927285,MIR4432HG, 3 3 118662390 198169872 183179358 183400551 180989794 184177456 34 AP2M1,DVL3,SOX2,EIF2B5,ABCC5,MCF2L2,ATP11B,RNU6-1,LAMP3,DCUN1D1,KLHL24,ABCF3,PARL,YEATS2,MCCC1,MAP6D1,B3GNT5,KLHL6,DNAJC19,HTR3C,HTR3D,HTR3E,SOX2-OT,FLJ46066,LINC00888,MIR4448,ABCC5-AS1,KLHL6-AS1,LINC01206,RNU6-7,LOC102724604,RNU6-2,LOC105374244,HTR3E-AS1, 20 AP2M1,DVL3,EIF2B5,ABCC5,MCF2L2,LAMP3,KLHL24,PARL,YEATS2,MAP6D1,B3GNT5,KLHL6,HTR3C,HTR3D,HTR3E,LINC00888,MIR4448,ABCC5-AS1,KLHL6-AS1,HTR3E-AS1, 4 3 118662390 198169872 181712339 181713336 180976314 184177456 35 AP2M1,DVL3,SOX2,FXR1,EIF2B5,ABCC5,MCF2L2,ATP11B,RNU6-1,LAMP3,DCUN1D1,KLHL24,ABCF3,PARL,YEATS2,MCCC1,MAP6D1,B3GNT5,KLHL6,DNAJC19,HTR3C,HTR3D,HTR3E,SOX2-OT,FLJ46066,LINC00888,MIR4448,ABCC5-AS1,KLHL6-AS1,LINC01206,RNU6-7,LOC102724604,RNU6-2,LOC105374244,HTR3E-AS1, 10 SOX2,ATP11B,RNU6-1,SOX2-OT,FLJ46066,LINC01206,RNU6-7,LOC102724604,RNU6-2,LOC105374244, 5 4 51886546 61515576 55346315 55636214 53498865 56810117 30 KDR,KIT,PDGFRA,PPAT,SPINK2,SRP72,CLOCK,CEP135,PAICS,NMU,CHIC2,EXOC1,TMEM165,KIAA1211,SRD5A3,HOPX,LNX1,ARL9,AASDH,PDCL2,GSX2,LOC339978,RPL21P44,LOC644145,LOC100506444,SRD5A3-AS1,THEGL,LNX1-AS1,LNX1-AS2,MIR7641-2, 8 KDR,CLOCK,NMU,TMEM165,SRD5A3,PDCL2,LOC644145,SRD5A3-AS1, 6 5 6662794 21861852 13691962 14531794 7900080 16067450 39 CTNND2,DAP,DNAH5,MTRR,TRIO,SEMA5A,MARCH6,CCT5,FBXL7,TAS2R1,FAM105A,ANKH,ROPN1L,OTULIN,FAM173B,CMBL,LOC285692,LOC389273,LINC01194,MARCH11,ANKRD33B,LOC729506,SNORD123,MIR887,LOC100130744,MIR4458HG,SNHG18,ROPN1L-AS1,MIR4458,MIR4454,MIR4637,MIR4636,LOC101929284,CTD-2201E9.1,LOC101929412,LOC101929454,CTD-2350J17.1,MIR6131,SNORD141A, 6 CTNND2,DNAH5,TRIO,FAM105A,LINC01194,MIR4454, 7 6 41502539 42067979 41649597 41941671 40433135 61680941 198 CRISP1,BMP5,DST,BYSL,RUNX2,CCND3,CDC5L,SLC29A1,GCLC,GSTA1,GSTA2,GSTA3,GSTA4,GUCA1A,GUCA1B,HCRTR2,HSP90AB1,IL17A,MCM3,MDFI,MEA1,MEP1A,MUT,NFKBIE,NFYA,PEX6,PGC,PGK2,PKHD1,POLH,PPP2R5D,PRIM2,PTK7,PRPH2,RHAG,SRF,TBCC,TFAP2B,CRISP2,VEGFA,PLA2G7,TFEB,SUPT3H,GCM1,NCR2,MED20,SLC25A27,BAG2,POLR1C,MAD2L1BP,TRAM2,CUL7,RCAN2,CRISP3,DNPH1,CNPY3,FRS3,SLC22A7,APOBEC2,CAPN11,ICK,ENPP4,CUL9,UBR2,GLTSCR1L,CD2AP,ZNF318,YIPF3,USP49,ZNF451,FBXO9,GNMT,TNFRSF21,TINAG,TMEM14A,PRICKLE4,MRPL2,CYP39A1,RAB23,CLIC5,TREM2,TREM1,HMGCLL1,GTPBP2,CENPQ,MRPS18A,MRPS10,LRRC1,TMEM63B,TRERF1,LRFN2,AARS2,XPO5,KIAA1586,ENPP5,ELOVL5,MRPL14,DLK2,TREML2,COL21A1,TFAP2D,TTBK1,PAQR8,RRP36,ABCC10,KLC4,MLIP,TJAP1,IL17F,EFHC1,FOXP4,KLHDC3,RN7SK,TAF8,C6orf141,PTCRA,TCTE1,KHDRBS2,BEND6,GSTA5,OPN5,ADGRF4,ADGRF5,TDRD6,SPATS1,C6orf223,RSPH9,LRRC73,TREML5P,ADCY10P1,OARD1,FAM83B,ADGRF2,TSPO2,UNC5CL,DEFB110,DEFB112,DEFB113,DEFB114,ADGRF1,TREML4,RPL7L1,TREML1,TREML3P,SLC35B2,GUSBP4,GLYATL3,GFRAL,LOC401261,CRIP3,TRAM2-AS1,KLHL31,DEFB133,MIR206,C6orf226,TMEM151B,ATP6V0CP3,PTCHD4,MIR133B,C6orf132,RPS16P5,MIR586,LOC730101,GSTA7P,LINC01512,TOMM6,ANKRD66,MIR548U,MTRNR2L9,LOC100506188,MIR4647,MIR4641,MIR4642,MIR5685,MLIP-IT1,FOXP4-AS1,LINCMD1,LOC101926898,LOC101926915,LOC101926934,LOC101926962,LOC101927020,LOC101927048,LOC101927082,LOC101927136,LINC01564,LOC101927189,LOC101927211,LOC101929555,LOC101929705,LOC101929726,LOC101930010,MIR6780B,LINC01276,LOC105375075,LINC00680,LINC00680-GUSBP4,CNPY3-GNMT, 10 BYSL,CCND3,MDFI,PGC,TFEB,MED20,FRS3,USP49,PRICKLE4,TOMM6, 8 7 54542710 55815488 54542710 55205639 53036584 55366004 12 EGFR,HPVC1,SEC61G,LANCL2,VSTM2A,POM121L12,VSTM2A-OT1,LINC01446,EGFR-AS1,LOC100996654,LINC01445,ELDR, 12 EGFR,HPVC1,SEC61G,LANCL2,VSTM2A,POM121L12,VSTM2A-OT1,LINC01446,EGFR-AS1,LOC100996654,LINC01445,ELDR, 9 7 90596607 110663580 107527215 108884554 90413433 110886571 246 ACHE,ASNS,AZGP1,CALCR,KRIT1,CDK6,AP1S1,COL1A2,CUX1,CYP3A7,CYP3A4,CYP3A5,CYP51A1,DLD,DLX5,DLX6,DYNC1I1,SLC26A3,EPHB4,EPO,GNB2,GNG11,GNGT1,GPR22,AGFG2,LAMB1,LRCH4,MCM7,DNAJB9,MUC3A,NPTX2,NRCAM,OCM2,ORC5,SERPINE1,PCOLCE,PDK4,SLC26A4,PEX1,CDK14,PIK3CG,PMS2P1,POLR2J,PON1,PON2,PON3,PRKAR2B,RELN,PSMC2,SRPK2,SYPL1,TAC1,TAF6,TFR2,TRIP6,VGF,ZAN,ZNF3,ZKSCAN1,ZSCAN21,MTERF1,SHFM1,TFPI2,TRRAP,FZD1,BUD31,SGCE,PLOD3,CLDN12,AP4M1,PMPCB,ATP5J2,MUC12,ARPC1B,NAMPT,AKAP9,RASA4,SLC25A13,LRRC17,POP7,BET1,COG5,ZNHIT1,ARPC1A,SH2B2,STAG3,CPSF4,COPS6,DUS4L,PDAP1,LAMB4,LMTK2,PEG10,ZKSCAN5,CLDN15,BRI3,TECPR1,PTCD1,FBXO24,HBP1,DNAJC2,PILRB,PILRA,ERVW-1,PNPLA8,FIS1,ACTL6B,SRRT,ASB4,ANKIB1,PUS7,ALKBH4,SAMD9,ZCWPW1,C7orf43,PPP1R9A,VPS50,KMT2E,BAIAP2L1,BCAP29,MEPCE,SLC12A9,SDHAF3,SMURF1,GATAD1,NFE4,RINT1,MOSPD3,GIGYF1,IFT22,CYP3A43,CASD1,ZNF655,PVRIG,GAL3ST4,PRKRIP1,CBLL1,ORAI2,OR2AE1,TSC22D4,TRIM56,ARMC10,IMMP2L,RBM48,ZNF394,MYH16,TRIM4,MYL10,COL26A1,MUC17,C7orf66,THAP5,CCDC71L,BHLHA15,SAMD9L,ZSCAN25,FAM200A,PPP1R35,GPC2,LRWD1,FAM185A,FBXL13,NAPEPLD,ATXN7L1,CDHR3,TMEM130,NYAP1,CNPY4,POLR2J2,HEPACAM2,MBLAC1,FAM133B,DLX6-AS1,ZNF789,SLC26A4-AS1,MOGAT3,GJC3,DPY19L2P2,GATS,NAT16,SLC26A5,LHFPL3,MGC72080,LAMTOR4,LRRD1,C7orf76,KPNA7,C7orf61,UFSP1,MIR106B,MIR25,MIR93,SPDYE3,SPDYE2,EIF3IP1,POLR2J3,MIR489,CYP51A1-AS1,LHFPL3-AS1,AZGP1P1,MIR591,LHFPL3-AS2,MIR653,SPDYE6,RPL19P12,PCOLCE-AS1,EFCAB10,UPK3BL,KMT2E-AS1,LINC01004,RASA4B,GS1-259H13.2,LOC100289561,MIR1285-1,MIR548O,SAP25,MIR4285,MIR3609,LOC100506136,LINC01007,ATP5J2-PTCD1,MIR4653,MIR4652,MIR4467,MIR4658,LOC100630923,MIR5692C2,MIR5692A2,MIR5692A1,MIR5090,CYP3A7-CYP3A51P,STAG3L5P,PVRIG2P,STAG3L5P-PVRIG2P-PILRB,LOC101927497,LOC101927550,ZASP,LOC101927746,LOC101927870,MIR6840,MIR6875,LOC102724094,LOC105375396,LOC105375401,LOC105375429,SCARNA28, 17 DLD,SLC26A3,GPR22,LAMB1,DNAJB9,NRCAM,SLC26A4,COG5,DUS4L,LAMB4,PNPLA8,BCAP29,CBLL1,C7orf66,THAP5,SLC26A4-AS1,EIF3IP1, 10 8 35544426 46842279 38314625 38429970 38281605 38512365 4 FGFR1,WHSC1L1,LETM2,C8orf86, 4 FGFR1,WHSC1L1,LETM2,C8orf86, 11 8 90006215 144173821 127415846 128150208 125436493 133296484 46 ADCY8,KCNQ3,MYC,POU5F1B,PVT1,SLA,TG,WISP1,HHLA1,TRIB1,NDRG1,EFR3A,LRRC6,ASAP1-IT1,ASAP1,PHF20L1,FAM49B,GSDMC,HPYR1,CCDC26,TMEM71,FAM84B,TMEM75,CASC8,LINC00977,OC90,LINC00861,CASC11,MIR1205,MIR1206,MIR1207,MIR1204,MIR1208,MIR3686,CCAT1,ASAP1-IT2,PCAT1,MIR5194,CCAT2,PRNCR1,LOC101927657,LINC00824,MIR7848,CASC21,CASC19,PCAT2, 24 MYC,POU5F1B,PVT1,GSDMC,CCDC26,FAM84B,TMEM75,CASC8,LINC00977,CASC11,MIR1205,MIR1206,MIR1207,MIR1204,MIR1208,MIR3686,CCAT1,PCAT1,CCAT2,PRNCR1,LINC00824,CASC21,CASC19,PCAT2, 12 9 32784162 68442799 35906266 35958116 35563848 36840508 38 CA9,CCIN,CD72,CLTA,NPR2,PAX5,RMRP,TESK1,TLN1,TPM2,RECK,RGP1,MELK,RUSC2,GNE,CREB3,SPAG8,SIT1,TMEM8B,OR2S2,GBA2,HINT2,ARHGEF39,LINC00950,RNF38,GLIPR2,LINC00961,CCDC107,FAM221B,OR13J1,HRCT1,MSMP,FAM166B,MIR4667,MIR4475,LOC101926948,MIR6852,MIR6853, 4 RECK,OR2S2,LINC00961,HRCT1, 13 11 68537643 77295540 70156926 70272458 70126215 70659806 7 CTTN,PPFIA1,FADD,SHANK2,ANO1,MIR548K,SHANK2-AS1, 3 PPFIA1,FADD,ANO1, 14 12 25069386 27981860 25090035 25245406 24584141 25503738 9 BCAT1,KRAS,LRMP,CASC1,LINC00477,ETFRF1,LMNTD1,C12orf77,LOC645177, 5 KRAS,LRMP,CASC1,ETFRF1,LMNTD1, 15 12 68858901 70543319 69569009 69958343 68856701 70524450 18 CPM,LYZ,CNOT2,PTPRB,YEATS4,CCT2,FRS2,CPSF6,KCNMB4,RAB3IP,BEST3,MYRFL,LRRC10,MIR1279,MIR3913-2,MIR3913-1,LOC101928002,LINC01481, 10 YEATS4,CCT2,FRS2,RAB3IP,BEST3,MYRFL,LRRC10,MIR3913-2,MIR3913-1,LOC101928002, 16 13 112376364 114132511 112804935 113429114 112569281 114132511 38 ATP4B,F7,F10,GAS6,LAMP1,GRK1,TFDP1,CUL4A,PROZ,CDC16,TUBGCP3,RASA3,ATP11A,MCF2L,TMCO3,DCUN1D2,PCID2,UPF3A,GRTP1,ADPRHL1,CHAMP1,TMEM255B,ATP11AUN,LINC00452,GAS6-AS1,LINC00552,MCF2L-AS1,GAS6-AS2,MIR4502,MIR548AR,LINC00565,GRTP1-AS1,LINC00454,ATP11A-AS1,LOC101928841,MIR8075,LINC01054,F10-AS1, 17 F7,F10,LAMP1,CUL4A,PROZ,ATP11A,MCF2L,PCID2,GRTP1,ADPRHL1,ATP11AUN,MCF2L-AS1,GRTP1-AS1,ATP11A-AS1,LOC101928841,MIR8075,F10-AS1, 17 14 36513091 38228038 36813896 37808868 33950774 38209368 38 CFL2,FOXA1,NFKBIA,PAX9,PSMA6,RNU1-4,SRP54,SSTR1,NKX2-1,KIAA0391,BAZ1A,NKX2-8,RNU1-3,RNU1-2,RNU1-1,MBIP,PPP2R3C,EAPP,SNX6,BRMS1L,INSM2,SLC25A21,EGLN3,MIPOL1,SPTSSA,RALGAPA1,SFTA3,IGBP1P1,FAM177A1,TTC6,LINC00517,SLC25A21-AS1,NKX2-1-AS1,MIR4503,PTCSC3,LINC00609,LOC101927178,SNORA101B, 6 FOXA1,SLC25A21,MIPOL1,TTC6,SLC25A21-AS1,MIR4503, 18 15 98971015 99121956 98971015 98971178 83020784 101975185 182 ACAN,ALDH1A3,ANPEP,BLM,BNC1,CHD2,FES,IDH2,IGF1R,ISG20,MAN2A2,MEF2A,MFGE8,NMB,NTRK3,FURIN,PCSK6,PDE8A,PLIN1,POLG,RLBP1,SH3GL3,SNRPA1,NR2F2,HSP90B2P,ST8SIA2,PEX11A,IQGAP1,PRC1,SLC28A1,ZNF592,SV2B,AP3S2,SEMA4B,CIB1,ABHD2,AKAP13,CHSY1,SYNM,SEC11A,GABARAPL3,VPS33B,MRPL46,OR4F4,SLCO3A1,HDGFRP3,NGRN,RHCG,BTBD1,TM6SF1,SCAND2P,ZSCAN2,DET1,LINS1,FANCI,MCTP2,VIMP,MESP1,UNC45A,RGMA,WDR93,ADAMTSL3,ALPK3,KLHL25,AEN,CRTC3,TTC23,MRPS11,LRRK1,TM2D3,WDR73,TICRR,RCCD1,ARRDC4,LINC00923,C15orf40,TARSL2,LRRC28,AGBL1,ASB7,LYSMD4,PGPEP1L,LINC00924,C15orf32,HAPLN3,MESP2,SPATA8,LINC00052,ADAMTS17,DNM1P46,CERS3,MIR9-3HG,LINC01579,NTRK3-AS1,LINC00928,FAM169B,ZNF774,ARPIN,GOLGA6L5P,KIF7,ZNF710,HDDC3,WASH3P,GOLGA2P7,UBE2Q2P1,SPATA41,GDPGP1,OR4F6,OR4F15,OR4F13P,FAM174B,LINC01197,LOC400464,MIR7-2,MIR9-3,DNM1P41,LOC440300,TTLL13P,LOC440311,PRKXP1,LOC642423,GOLGA6L4,NR2F2-AS1,EFTUD1P1,AGBL1-AS1,ASB9P1,FAM138E,LOC100128108,GOLGA6L3,LINC00930,DDX11L9,MIR1276,MIR1179,MIR1469,MIR1302-2,MIR1302-9,MIR1302-10,MIR3174,MIR1302-11,MIR3175,UBE2Q2L,LINC00933,PRC1-AS1,LINC01578,LOC100507472,C15orf38-AP3S2,MIR3529,MIR4515,MIR4714,SPATA8-AS1,MIR5009,MIR5094,MIR548AP,CRTC3-AS1,LOC101926911,CRAT37,LINC01581,LINC01580,LOC101927153,LOC101927286,LOC101927310,LINC01582,LOC101927751,LOC101929679,LINC01584,LINC01586,LINC01585,MIR7706,MIR6859-2,MIR6859-3,MIR6859-1,MIR6766,CERS3-AS1,LOC102723335,LOC102724034,LOC102724452,LOC103171574,IRAIN,LUNAR1,LOC104613533,LOC105370954,PCSK6-AS1, 3 SYNM,PGPEP1L,LUNAR1, 19 17 64465431 64571395 64465431 64547823 61867746 83094597 379 AANAT,ACOX1,ACTG1,BIRC5,APOH,ARHGDIA,CACNG1,CD7,CD79B,CDK3,CSH1,CSH2,CSHL1,CSNK1D,SLC25A10,CYB561,ACE,DDX5,ERN1,EVPL,BPTF,FASN,FDXR,FOXJ1,GAA,GALK1,GCGR,GH1,GH2,UTS2R,GPS1,GRB2,GRIN2C,H3F3B,ICAM2,MRPL58,FOXK2,ITGB4,KCNJ2,KCNJ16,KPNA2,LGALS3BP,LLGL2,MAFG,MAP3K3,NPTX1,P4HB,PDE6G,PECAM1,PRKAR1A,PRKCA,MAP2K6,PRPSAP1,PSMC5,PSMD12,PYCR1,PCYT2,RAC3,RFNG,RPL38,MRPL12,SCN4A,SEC14L1,SECTM1,SRSF2,SGSH,SMARCD2,SUMO2,SOX9,SRP68,SSTR2,TBCD,TIMP2,TK1,AXIN2,CBX4,DNAH17,RGS9,GALR2,SPHK1,SOCS3,SLC16A6,SLC16A5,SLC16A3,SYNGR2,HGS,CYTH1,SLC9A3R1,COG1,RECQL5,PGS1,AATK,TMEM94,EIF4A3,MRC2,HELZ,MED13,ALYREF,DCAF7,ABCA10,ABCA9,ABCA8,BAIAP2,ATP5H,ST6GALNAC2,GNA13,SEPT9,CD300C,RAB40B,TLK2,POLG2,CD300A,TMC6,DDX42,ARSG,CEP131,GGA3,JMJD6,EXOC7,ABCA6,ABCA5,KCTD2,WBP2,CDC42EP4,FSCN2,NOL11,TANC2,NAT9,PITPNC1,NARF,CACNG5,CACNG4,SAP30BP,NT5C,CDR2L,MRPS7,HN1,DCXR,TACO1,AMZ2,ANAPC11,SIRT7,SDK2,FAM20A,TMEM104,C17orf80,CCDC40,WIPI1,NPLOC4,ST6GALNAC1,TEX2,GPRC5C,WDR45B,CCDC47,CBX8,MIF4GD,INTS2,CASKIN2,RPTOR,BAHCC1,USP36,RNF213,TNRC6C,SLC25A19,UBE2O,DUS1L,FN3K,DNAI2,SMURF2,ENGASE,MRPL38,ASPSCR1,CARD14,MFSD11,C17orf62,ARMC7,CHMP6,RHBDF2,FN3KRP,OGFOD3,ZNF750,NUP85,MYO15B,FAAP100,LIMD2,KCNH6,TSPAN10,BRIP1,QRICH2,CBX2,FAM104A,MGC16275,FBF1,UNK,CEP95,TRIM47,STRADA,PRR29,MAFG-AS1,OTOP2,TTYH2,CYGB,RNF157,C1QTNF1,PPP1R27,FTSJ3,METTL23,SLC38A10,CANT1,USH1G,CD300LB,KIF19,TBC1D16,AFMID,MGAT5B,TEPSIN,B3GNTL1,RBFOX3,CD300LF,C17orf77,TCAM1P,EFCAB3,LOC146795,LOC146880,NOTUM,TMC8,MARCH10,CEP112,CENPX,LRRC45,SLC39A11,AMZ2P1,TRIM65,UNC13D,MYADML2,NPB,LINC00469,FADS6,HID1,TSEN54,UBALD2,LINC00868,TMEM235,CCDC57,HEXDC,C17orf58,MILR1,SLC26A11,ENDOV,NDUFAF8,LINC00482,TMEM105,METRNL,RAB37,METTL2A,ENPP7,OXLD1,CCDC137,ARL16,CD300E,OTOP3,MCRIP1,GPR142,ZACN,LRRC37A3,BTBD17,AATK-AS1,RPL23AP87,PRR29-AS1,KCNJ2-AS1,SOX9-AS1,LINC00511,LOC400620,FLJ45079,TEX19,MXRA7,TBC1D3P2,PLEKHM1P1,LOC440461,BAIAP2-AS1,MIR338,CPSF4L,SMIM5,SNHG20,SCARNA16,SNORA50C,SNORD1A,SNORD1B,SNORD1C,SNORD104,MIR548D2,MIR633,MIR634,MIR635,MIR636,MIR657,LOC729683,PRCD,SNORA38B,LOC100130370,LOC100130520,SMIM6,TNRC6C-AS1,CD300LD,LOC100132174,PRO1804,LOC100134391,TEN1,C17orf99,LOC100287042,LOC100294362,MIR1250,MIR4316,MIR3065,MIR3186,MIR4315-2,MIR4315-1,LINC00674,LINC00673,MIR3678,MIR3615,MIR548AA2,LOC100507002,RNF157-AS1,SNHG16,LOC100507351,C1QTNF1-AS1,MIR1273E,TEN1-CDK3,MIR1268B,MIR4739,MIR4525,MIR4738,MIR4740,MIR4524A,MIR4730,MIR3064,MIR5047,HP09025,CEP295NL,MIR4524B,LOC100996291,DNAH17-AS1,LOC101927877,PRKCA-AS1,LOC101928021,LINC01482,LINC01483,LINC01028,CASC17,LOC101928205,LOC101928251,LOC101928514,LOC101928674,LOC101928710,LOC101928738,LOC101928766,LOC101928855,LOC101929511,LOC101929552,MIR6080,MIR6786,MIR6787,MIR6868,MIR6516,MIR6785,LINC01152,LINC01497,LOC102723505,LOC102723517,HID1-AS1,ABCA9-AS1,LOC105274304,LOC105371899,LOC105371907,LOC105371925,SNHG25,CRAT40,SNORD134, 9 DDX5,PECAM1,POLG2,SMURF2,CEP95,MILR1,MIR1273E,MIR3064,MIR5047, 20 18 24476725 25195138 24476725 24477584 21664252 32470286 60 AQP4,CDH2,DSC1,DSC2,DSC3,DSG1,DSG2,DSG3,GATA6,LAMA3,MEP1B,NPC1,RBBP8,SS18,TAF4B,TTR,RIOK3,B4GALT6,TRAPPC8,ZNF521,CABYR,C18orf8,RNF138,RNF125,IMPACT,MIB1,HRH4,CTAGE1,GAREM1,CHST9,TMEM241,CABLES1,OSBPL1A,TTC39C,PSMA8,SLC25A52,DSG4,AQP4-AS1,ANKRD29,ABHD3,KCTD1,MIR1-2,MIR133A1,PCAT18,LOC729950,GATA6-AS1,MIR302F,MIR320C1,MIR320C2,LINC01543,MIR4741,DSG2-AS1,LOC101927571,DSCAS,DSG1-AS1,MIR8057,MIR133A1HG,TTC39C-AS1,LOC105372028,LOC105372038, 4 ZNF521,HRH4,LOC729950,LOC105372028, 21 19 29207526 41257424 37887911 38162393 36577298 39268655 74 ACTN4,ECH1,HNRNPL,LGALS4,LGALS7,NFKBIB,PSMD8,MRPS12,RYR1,DPF1,KCNK6,PAK4,SPINT2,MAP4K1,ZFP30,SIRT2,SIPA1L3,ZNF345,EIF3K,ZNF571,SARS2,ZNF529,CATSPERG,C19orf33,WDR87,ZNF527,ZNF607,ZNF382,YIF1B,ZNF461,ZNF585B,PPP1R14A,FBXO17,RASGRP4,ZNF573,RINL,FBXO27,ZNF420,FAM98C,CAPN12,ZNF569,ZNF570,ZNF567,ZNF383,ZNF781,ZNF540,ZNF585A,GGN,IFNL2,IFNL3,ZNF790-AS1,LOC284412,HKR1,ZNF850,NCCRP1,SYCN,ZNF829,ZNF568,ZNF790,ZNF793,ACP7,SPRED3,CCER2,LOC644554,LGALS7B,LOC728485,ZNF571-AS1,LOC100631378,IFNL4,ZNF529-AS1,LINC01534,LINC01535,ZNF793-AS1,LOC105372397, 2 SIPA1L3,WDR87, 22 20 31303190 35311304 32086606 32210214 31259654 34845306 77 AHCY,ASIP,BCL2L1,DNMT3B,E2F1,FOXS1,GGT7,HCK,ID1,PLAGL2,SNTA1,EIF2S2,CBFA2T2,KIF3B,TM9SF4,PXMP4,RALY,MAPRE1,TPX2,NCOA6,POFUT1,REM1,BPIFA1,CDK5RAP1,TP53INP2,NECAB3,BPIFB2,HM13,PDRG1,DYNLRB1,ITCH,MAP1LC3A,COX4I2,ZNF341,MYLK2,BPIFB1,DEFB118,DUSP15,TSPY26P,BPIFB6,BPIFA3,C20orf144,CHMP4B,PIGU,HMGB3P1,BPIFA2,NOL4L,CCM2L,SUN5,LINC00028,LOC149950,COMMD7,BPIFB4,TTLL9,ACTL10,ASXL1,DEFB115,DEFB116,DEFB119,DEFB121,DEFB122,DEFB123,DEFB124,C20orf203,BPIFA4P,XKR7,BPIFB3,MIR644A,MIR1825,MIR3193,MIR4755,HM13-AS1,RALY-AS1,LOC101929698,ZNF341-AS1,MIR7641-2,ABALON, 5 HCK,PLAGL2,TM9SF4,POFUT1,TSPY26P,