index chromosome region_start region_end peak_start peak_end enlarged_peak_start enlarged_peak_end n_genes_in_region genes_in_region n_genes_in_peak genes_in_peak n_genes_on_chip genes_on_chip top 3 1 1 161430001 161700001 161440001 161460000 161430000 161690000 8 FCGR2A,FCGR2B,FCGR3A,FCGR3B,HSPA6,HSPA7,FCGR2C,RPL31P11, 0 [FCGR2A] 2 2 58210001 68690001 63870001 63910000 36030000 69590001 221 ACYP2,BCYRN1,ZFP36L2,CALM2,CYP1B1,EPAS1,EFEMP1,FSHR,GFPT1,MSH6,FOXN2,LHCGR,EPCAM,MDH1,MEIS1,MSH2,MTIF2,OTX1,PEX13,VIT,PIGF,PLEK,PPM1B,PPP3R1,PRKCE,EIF2AK2,RAB1A,REL,RPS27A,SRSF7,SIX3,SLC1A4,SLC3A1,SLC8A1,SOS1,SPTBN1,STRN,UGP2,VRK2,XPO1,MAP4K3,COX7A2L,NRXN1,CRIPT,PREPL,FEZ2,SOCS5,USP34,SERTAD2,ARHGAP25,ACTR2,LRPPRC,CEBPZ,C1D,CCT4,CDC42EP3,B3GNT2,SIX2,PROKR1,GPR75,GTF2A1L,STON1,AAK1,CEP68,PSME4,EHBP1,RHOQ,HAAO,PRKD3,QPCT,CNRIP1,NFU1,ERLEC1,BMP10,EML4,LGALSL,WDPCP,ASB3,CRIM1,VPS54,DYNC2LI1,BCL11A,ETAA1,HEATR5B,AFTPH,FANCL,SRBD1,NDUFAF7,CCDC88A,GKN1,KCNK12,PNO1,RPL23AP32,RTN4,PELI1,TTC7A,PPP4R3B,MTA3,THADA,ATL2,ABCG5,ABCG8,PAPOLG,CAMKMT,GEMIN6,FBXO11,THUMPD2,FAM161A,ANTXR1,KIAA1841,PNPT1,MCFD2,ATP6V1E2,DHX57,PKDCC,HNRNPLL,CFAP36,CCDC85A,WDR92,PPP1R21,C2orf73,CLHC1,PLEKHH2,GALM,TMEM178A,AHSA2,COMMD1,PUS10,LINC00309,RMDN2,OXER1,KCNG3,GKN2,APLF,TMEM17,SPRED2,GPATCH11,C2orf61,CYP1B1-AS1,STON1-GTF2A1L,LOC339803,C2orf74,LOC339807,CDKL4,PRORSD1P,LOC375196,LOC388942,TMEM247,LINC01118,TSPYL6,SULT6B1,C2orf91,LINC01121,EML6,LINC01122,LINC01185,LOC400958,MIR216A,MIR217,CHAC2,FBXO48,HCG2040054,LOC644838,MIR559,LOC728730,C1GALT1C1L,LOC729348,MORN2,LOC730100,MEIS1-AS3,SNORA36C,SNORA70B,MIR216B,SLC8A1-AS1,LOC100129434,LINC01126,LOC100132215,LINC01119,DBIL5P2,ARHGEF33,LOC100288911,GPR75-ASB3,MIR3126,MIR3682,CEBPZOS,SIX3-AS1,LOC100506142,LOC100507006,LOC100507073,MIR4433A,MIR4426,MIR4434,MIR4431,MIR4778,MIR4432,MIR5192,MEIS1-AS2,LOC101060019,RMDN2-AS1,LOC101805491,LOC101927043,LOC101927165,LOC101927285,LOC101927402,LOC101927438,LOC101927577,LOC101927661,LOC101927701,LINC00211,LOC101929596,LOC101929723,MIR4433B,MIR548BA,LOC102723824,LOC102723854,LINC01628,LOC102800447,MIR8485,MIR217HG,LOC105374596,MIR4432HG, 2 UGP2,VPS54, 3 2 177210001 177330001 177220001 177230000 177120000 177360001 6 NFE2L2,HNRNPA3,LOC100130691,MIR3128,MIR4444-1,MIR6512, 1 HNRNPA3, 4 3 109950001 198295559 181790001 182100000 181630000 182860001 6 SOX2,ATP11B,SOX2-OT,FLJ46066,LINC01206,LOC105374244, 1 LINC01206, 5 4 52770001 56590000 55470001 55520000 52300000 56710001 39 KDR,KIT,PDGFRA,PPAT,SRP72,CLOCK,CEP135,PAICS,NMU,CHIC2,EXOC1,TMEM165,DANCR,KIAA1211,USP46,RASL11B,SRD5A3,FIP1L1,HOPX,LNX1,ARL9,AASDH,PDCL2,LINC01618,SCFD2,GSX2,LOC339978,RPL21P44,USP46-AS1,LOC644145,SNORA26,ERVMER34-1,LOC100506444,SRD5A3-AS1,THEGL,MIR4449,LNX1-AS1,LNX1-AS2,MIR7641-2, 1 CLOCK, 6 5 34760001 41350001 36920001 37010000 33940000 50830001 93 hsa-mir-1274a,C6,C7,C9,DAB2,FGF10,FYB,GDNF,GHR,HMGCS1,IL7R,LIFR,OXCT1,PRKAA1,PRLR,PTGER4,RAD1,RPL37,SEPP1,SKP2,SLC1A3,ZNF131,OSMR,NUP155,PAIP1,MRPS30,NNT,TTC33,AMACR,NIPBL,RAI14,FBXO4,SLC45A2,RXFP3,WDR70,BRIX1,CCL28,TMEM267,AGXT2,C5orf42,PARP8,SPEF2,CARD6,LMBRD2,C1QTNF3,EMB,MROH2B,EGFLAM,NADK2,UGT3A1,CAPSL,DNAJC21,TTC23L,LOC153684,UGT3A2,NIM1K,RANBP3L,RICTOR,C5orf51,PLCXD3,HCN1,C5orf34,ANXA2R,SNORD72,FLJ32255,NIPBL-AS1,LOC648987,MIR580,CCDC152,LOC100132356,MIR3650,LOC100506406,EGFLAM-AS2,LIFR-AS1,LOC100506548,LOC100506639,BRCAT54,C1QTNF3-AMACR,NNT-AS1,EGFLAM-AS4,GDNF-AS1,OXCT1-AS1,LINC01265,LOC101926940,LOC101926960,FGF10-AS1,LOC101929745,OSMR-AS1,MIR7641-2,LINC00603,BRCAT107,LOC105374727,LOC105374729, 1 NIPBL, 7 5 1 1900001 1 1030000 1 1290000 27 SDHA,SLC9A3,TERT,TRIP13,PDCD6,SLC12A7,TPPP,EXOC3,PP7080,CEP72,AHRR,BRD9,ZDHHC11,NKD2,EXOC3-AS1,CCDC127,PLEKHG4B,SLC6A19,SLC6A18,LRRC14B,LOC100288152,LOC100506688,MIR4456,MIR4635,LOC100996325,CTD-3080P12.3,HRAT5, 27 SDHA,SLC9A3,TERT,TRIP13,PDCD6,SLC12A7,TPPP,EXOC3,PP7080,CEP72,AHRR,BRD9,ZDHHC11,NKD2,EXOC3-AS1,CCDC127,PLEKHG4B,SLC6A19,SLC6A18,LRRC14B,LOC100288152,LOC100506688,MIR4456,MIR4635,LOC100996325,CTD-3080P12.3,HRAT5, 8 6 1 90001 1 80000 1 80001 0 [LINC00266-3] 0 [LINC00266-3] 9 7 1410001 1560001 1440001 1470000 1420000 1500001 2 INTS1,MICALL2, 1 MICALL2, 10 7 90600001 100040001 96470001 96520000 93410000 97110001 29 CALCR,COL1A2,DLX5,DLX6,DYNC1I1,GNG11,GNGT1,PDK4,PON1,PON2,PON3,SHFM1,TFPI2,SGCE,SLC25A13,BET1,PEG10,ASB4,PPP1R9A,SDHAF3,CASD1,DLX6-AS1,C7orf76,MIR489,MIR591,MIR653,LOC100506136,MIR4652,LOC105375401, 1 C7orf76, 11 8 35400001 46560001 38300001 38360000 38290000 38690001 5 FGFR1,WHSC1L1,LETM2,RNF5P1,C8orf86, 1 WHSC1L1, 12 8 99900001 145138636 127340001 127400000 126630000 128610001 19 MYC,POU5F1B,PVT1,TMEM75,CASC8,CASC11,MIR1205,MIR1206,MIR1207,MIR1204,MIR1208,CCAT1,PCAT1,CCAT2,PRNCR1,LINC00824,CASC21,CASC19,PCAT2, 2 CASC8,CASC21, 13 8 49100001 49870000 49710001 49730000 49210000 49800001 1 LOC100507464, 0 [SNTG1] 14 8 99900001 145138636 142460001 142510000 142450000 142540001 1 ADGRB1, 1 ADGRB1, 15 9 1 800000 1 40000 1 40001 14 FOXD4,KANK1,CBWD1,DOCK8,C9orf66,FAM138A,FAM138C,WASH1,DDX11L5,MIR1302-2,MIR1302-9,MIR1302-10,MIR1302-11,PGM5P3-AS1, 8 FAM138A,FAM138C,WASH1,DDX11L5,MIR1302-2,MIR1302-9,MIR1302-10,MIR1302-11, 16 9 138260001 138394717 138260001 138290000 138260000 138394717 0 [FAM157B] 0 [FAM157B] 17 11 68680001 74900001 70420001 70450000 69550000 70730001 14 CCND1,CTTN,FGF3,FGF4,PPFIA1,FADD,FGF19,SHANK2,ANO1,ORAOV1,ANO1-AS2,MIR548K,SHANK2-AS1,LOC101928443, 1 CTTN, 18 12 50001 800001 50001 50001 50000 780001 13 NINJ2,KDM5A,SLC6A12,SLC6A13,WNK1,CCDC77,B4GALNT3,IQSEC3,LOC574538,LOC100049716,LOC101929384,LOC102723544,LOC105369595, 13 NINJ2,KDM5A,SLC6A12,SLC6A13,WNK1,CCDC77,B4GALNT3,IQSEC3,LOC574538,LOC100049716,LOC101929384,LOC102723544,LOC105369595, 19 12 69540001 69620001 69540001 69600000 66660000 72360001 50 CPM,IFNG,LYZ,MDM2,CNOT2,PTPRB,PTPRR,RAP1B,TSPAN8,YEATS4,DYRK2,LGR5,CCT2,FRS2,CPSF6,RAB21,GRIP1,KCNMB4,TRHDE,IL22,TMEM19,SLC35E3,IL26,CAND1,MDM1,NUP107,TBC1D15,THAP2,RAB3IP,TPH2,BEST3,ZFC3H1,MYRFL,TRHDE-AS1,LRRC10,MRS2P2,LOC100130075,MIR1279,SNORA70G,MIR3913-2,MIR3913-1,LOC100507175,LOC100507195,LOC100507250,IFNG-AS1,LOC101927901,LINC01479,LOC101928002,LINC01481,LOC102724421, 4 CCT2,FRS2,MIR3913-2,MIR3913-1, 20 13 16110001 16230001 16170001 16180000 16110000 16210001 0 [FAM230C] 0 [FAM230C] 21 14 37160001 37780001 37350001 37380000 36440000 38020001 12 FOXA1,PAX9,NKX2-1,NKX2-8,SLC25A21,MIPOL1,SFTA3,TTC6,LINC00517,SLC25A21-AS1,NKX2-1-AS1,MIR4503, 1 MIPOL1, 22 15 101940001 101991189 101950001 101991189 101950000 101991189 10 WASH3P,FAM138E,DDX11L9,MIR1302-2,MIR1302-9,MIR1302-10,MIR1302-11,MIR6859-2,MIR6859-3,MIR6859-1, 10 WASH3P,FAM138E,DDX11L9,MIR1302-2,MIR1302-9,MIR1302-10,MIR1302-11,MIR6859-2,MIR6859-3,MIR6859-1, 23 17 81680001 82120001 81980001 82050000 81890000 82080001 20 FASN,GPS1,MAFG,PYCR1,PCYT2,RAC3,RFNG,ALYREF,DCXR,ANAPC11,SIRT7,DUS1L,ASPSCR1,MAFG-AS1,NOTUM,CENPX,LRRC45,MYADML2,NPB,SNORD134, 6 RAC3,RFNG,DCXR,ASPSCR1,CENPX,LRRC45, 24 19 28180001 40900001 37280001 37300000 37270000 37310001 3 LOC284412,HKR1,LINC01535, 0 [LOC284412] 25 19 1 290001 1 90001 1 280000 9 OR4F17,WASH5P,LINC01002,FAM138A,FAM138C,MIR1302-2,MIR1302-9,MIR1302-10,MIR1302-11, 9 OR4F17,WASH5P,LINC01002,FAM138A,FAM138C,MIR1302-2,MIR1302-9,MIR1302-10,MIR1302-11, 26 19 58590000 58617616 58590000 58617616 58370001 58617616 20 RPS5,MZF1,ZNF132,UBE2M,TRIM28,SLC27A5,ZNF324,CHMP2A,ZNF446,CENPBD1P1,ZBTB45,ZNF837,ZNF497,ZNF584,ZNF324B,RNF225,MZF1-AS1,MIR4754,MIR6807,LOC105372483, 18 RPS5,MZF1,ZNF132,UBE2M,TRIM28,SLC27A5,ZNF324,CHMP2A,ZNF446,CENPBD1P1,ZBTB45,ZNF837,ZNF584,ZNF324B,RNF225,MZF1-AS1,MIR4754,MIR6807, 27 20 31250001 35810000 31890001 31980000 31310000 32350001 33 BCL2L1,FOXS1,HCK,ID1,PLAGL2,KIF3B,TM9SF4,TPX2,POFUT1,REM1,HM13,PDRG1,COX4I2,MYLK2,DEFB118,DUSP15,TSPY26P,CCM2L,LINC00028,TTLL9,ASXL1,DEFB116,DEFB119,DEFB121,DEFB122,DEFB123,DEFB124,XKR7,MIR1825,MIR3193,HM13-AS1,MIR7641-2,ABALON, 3 PDRG1,TTLL9,XKR7, 28 21 16130001 16190001 16130001 16180000 10330001 18970001 36 BAGE,CXADR,TMPRSS15,HSPA13,TPTE,NRIP1,BTG3,USP25,RBM11,CYP4F29P,CHODL-AS1,C21orf91,SAMSN1,BAGE4,BAGE3,BAGE2,CHODL,ANKRD30BP2,LIPI,ABCC13,C21orf91-OT1,POTED,LOC388813,MIR99AHG,ANKRD20A11P,MIRLET7C,MIR125B2,MIR99A,MIR548X,MIR3118-1,MIR3156-3,LINC01549,SAMSN1-AS1,MIR548XHG,MIR8069-1,LOC102724188, 1 MIR99AHG, 29 22 11380001 11470000 11430001 11450000 11380000 11500001 0 [LOC102723769] 0 [LOC102723769]