Sample	Chromosome	Start.bp	End.bp	Num.Markers	Seg.CN
C3L-00081	1	1	103520001	10286	0.000000
C3L-00081	1	103790001	103910000	19	-0.170961
C3L-00081	1	103910001	153150000	1915	0.000000
C3L-00081	1	153150001	157680000	488	0.132667
C3L-00081	1	157680001	242880000	9008	0.000000
C3L-00081	1	243200000	243300000	14	-0.190525
C3L-00081	1	243300001	248956422	346	0.000000
C3L-00081	2	1	17320000	1664	0.000000
C3L-00081	2	17320001	17500000	22	0.127015
C3L-00081	2	17500001	73780000	5493	0.000000
C3L-00081	2	73780001	73820000	7	0.178695
C3L-00081	2	73820001	140220000	5420	0.000000
C3L-00081	2	140220001	140530000	43	0.342157
C3L-00081	2	140530001	140720000	27	0.000000
C3L-00081	2	140720001	140770000	8	-0.770237
C3L-00081	2	140770001	141240000	70	-1.151788
C3L-00081	2	141240001	141460000	37	-0.429892
C3L-00081	2	141460001	141500000	7	0.000000
C3L-00081	2	141500001	141840000	51	-0.736045
C3L-00081	2	141840001	145460000	396	0.000000
C3L-00081	2	145460001	145500000	5	0.218485
C3L-00081	2	145500001	168940000	2509	0.000000
C3L-00081	2	168940001	169000000	5	0.142416
C3L-00081	2	169000001	235650000	6939	0.000000
C3L-00081	2	235650001	235720000	10	-0.372364
C3L-00081	2	235720001	242193529	603	0.000000
C3L-00081	3	1	67460000	6166	0.000000
C3L-00081	3	67480001	67590000	12	-0.364201
C3L-00081	3	67590001	71430000	400	0.000000
C3L-00081	3	71430001	71540000	8	-0.165450
C3L-00081	3	71540001	80770000	901	0.000000
C3L-00081	3	80770001	80830000	8	-0.394257
C3L-00081	3	80830001	90480000	1040	0.000000
C3L-00081	3	90480001	90700000	32	-0.448796
C3L-00081	3	90700001	93800001	359	0.000000
C3L-00081	3	94010001	126990000	3581	0.777424
C3L-00081	3	126990001	127020000	6	1.010108
C3L-00081	3	127020001	145600000	1899	0.777424
C3L-00081	3	145600001	148570000	227	1.062423
C3L-00081	3	148570001	153310000	529	1.171418
C3L-00081	3	153310001	154900000	151	1.062423
C3L-00081	3	154900001	154960000	8	0.897535
C3L-00081	3	154960001	159210000	439	1.099108
C3L-00081	3	159210001	162270000	312	1.886274
C3L-00081	3	162270001	164730000	242	1.764098
C3L-00081	3	164730001	168960000	423	1.877181
C3L-00081	3	168960001	169070000	11	1.984805
C3L-00081	3	169070001	170100000	121	1.877181
C3L-00081	3	170100001	170170000	9	1.587518
C3L-00081	3	170170001	190350000	2151	1.999962
C3L-00081	3	190350001	190390000	7	2.312270
C3L-00081	3	190390001	197690000	626	1.999962
C3L-00081	3	197690001	198180000	15	1.889453
C3L-00081	3	198180001	198295559	17	0.897535
C3L-00081	4	1	21130000	1988	0.000000
C3L-00081	4	21130001	21690000	60	-0.121009
C3L-00081	4	21690001	28620000	720	0.000000
C3L-00081	4	28620001	28660000	5	-0.174290
C3L-00081	4	28660001	54250000	2231	0.000000
C3L-00081	4	54250001	59920000	660	0.327517
C3L-00081	4	59920001	88800000	2922	0.000000
C3L-00081	4	88800001	89870000	114	0.351354
C3L-00081	4	89870001	89920000	7	0.528234
C3L-00081	4	89920001	90250000	32	0.351354
C3L-00081	4	90250001	90770000	66	0.000000
C3L-00081	4	90770001	91120000	42	0.217584
C3L-00081	4	91120001	91280000	19	0.113610
C3L-00081	4	91280001	91450001	22	0.220118
C3L-00081	4	91560001	91630000	9	0.000000
C3L-00081	4	91630001	100320000	882	0.225559
C3L-00081	4	100320001	140360000	3951	0.000000
C3L-00081	4	140360001	140460000	12	0.330783
C3L-00081	4	140460001	190214555	4404	0.000000
C3L-00081	5	1	1030000	14	0.208877
C3L-00081	5	1290000	30710000	2911	0.000000
C3L-00081	5	30710001	30750000	7	0.206620
C3L-00081	5	30750001	30910000	21	0.000000
C3L-00081	5	30910001	44380000	1380	0.100772
C3L-00081	5	44380001	45390001	121	0.000000
C3L-00081	5	50830001	52220000	179	0.229927
C3L-00081	5	52220001	56000000	399	0.336839
C3L-00081	5	56000001	59160000	336	0.000000
C3L-00081	5	59160001	59530000	35	-0.403995
C3L-00081	5	59530001	85740000	2468	0.000000
C3L-00081	5	85740001	85790000	6	-0.145070
C3L-00081	5	85790001	181538259	9475	0.000000
C3L-00081	6	1	130000	19	0.169531
C3L-00081	6	130001	35630000	3260	0.000000
C3L-00081	6	35630001	35670000	7	-0.138686
C3L-00081	6	35670001	66080000	2899	0.000000
C3L-00081	6	66080001	66170000	10	-0.152169
C3L-00081	6	66170001	72780000	667	0.000000
C3L-00081	6	72780001	72960000	22	-0.792912
C3L-00081	6	72960001	77000000	434	0.000000
C3L-00081	6	77000001	77060000	7	-0.755206
C3L-00081	6	77060001	124810000	4740	0.000000
C3L-00081	6	124810001	125240000	57	-0.286218
C3L-00081	6	125240001	170590000	4354	0.000000
C3L-00081	6	170748996	170805979	7	0.208218
C3L-00081	7	1	1410000	123	0.000000
C3L-00081	7	1410001	1560000	27	0.200606
C3L-00081	7	1560001	8140001	586	0.000000
C3L-00081	7	8490001	8530000	6	0.131517
C3L-00081	7	8580001	70700000	5379	0.000000
C3L-00081	7	70700001	70780000	14	-0.181989
C3L-00081	7	70780001	136990000	6540	0.000000
C3L-00081	7	136990001	137090000	17	0.121532
C3L-00081	7	137090001	151040000	1267	0.000000
C3L-00081	7	151040001	151090000	10	0.244373
C3L-00081	7	151090001	159345973	700	0.000000
C3L-00081	8	1	3500000	202	-0.216065
C3L-00081	8	3500001	3690001	25	-0.367708
C3L-00081	8	3800001	3860000	7	-0.588592
C3L-00081	8	3860001	4100001	23	-0.704347
C3L-00081	8	4120000	4360001	10	-0.367708
C3L-00081	8	4380001	37470000	3044	-0.216065
C3L-00081	8	37470001	59440000	2076	0.000000
C3L-00081	8	59440001	59520000	10	-0.101171
C3L-00081	8	59520001	73480000	1503	0.000000
C3L-00081	8	73480001	73570000	13	0.105470
C3L-00081	8	73570001	145138636	7401	0.000000
C3L-00081	9	1	20950000	1753	-0.470753
C3L-00081	9	20950001	26890000	681	-1.224125
C3L-00081	9	26890001	29230000	198	-0.470753
C3L-00081	9	29230001	29270000	6	-0.638822
C3L-00081	9	29270001	30640000	106	0.564843
C3L-00081	9	30710001	96900000	3962	0.000000
C3L-00081	9	96900001	97030000	18	0.105919
C3L-00081	9	97030001	136120000	4040	0.000000
C3L-00081	9	136120001	137440000	136	0.101352
C3L-00081	9	137440001	138260000	67	0.000000
C3L-00081	9	138260001	138394717	16	0.358003
C3L-00081	10	1	79870001	7398	0.000000
C3L-00081	10	80250001	86930000	715	-0.431202
C3L-00081	10	86930001	87850000	66	0.000000
C3L-00081	10	87850001	89450000	169	-0.416849
C3L-00081	10	89450001	133797422	4460	0.000000
C3L-00081	11	1	69550000	6446	0.000000
C3L-00081	11	69550001	71730000	288	3.355210
C3L-00081	11	71730001	71860000	12	2.598648
C3L-00081	11	71860001	71890000	6	3.355210
C3L-00081	11	71890001	72040000	16	2.598648
C3L-00081	11	72040001	72430000	46	3.410957
C3L-00081	11	72430001	72610000	23	2.803540
C3L-00081	11	72610001	73790000	154	3.410957
C3L-00081	11	73790001	87860000	1544	0.000000
C3L-00081	11	87910001	87940000	5	0.160226
C3L-00081	11	87940001	95410000	720	0.000000
C3L-00081	11	95410001	95600000	23	0.134006
C3L-00081	11	95600001	135086622	3981	0.000000
C3L-00081	12	1	33370001	3276	0.000000
C3L-00081	12	38830001	39270000	46	0.921454
C3L-00081	12	39270001	39520000	31	0.680112
C3L-00081	12	39520001	133275309	9523	0.000000
C3L-00081	13	1	16110000	1620	-0.318119
C3L-00081	13	16110001	16230000	22	0.000000
C3L-00081	13	16230001	16280000	10	-0.330989
C3L-00081	13	16280001	16370000	15	0.000000
C3L-00081	13	16370001	16410000	6	0.238437
C3L-00081	13	16410001	60010000	4062	0.000000
C3L-00081	13	60010001	60150000	16	-0.794083
C3L-00081	13	60150001	86170000	2590	0.000000
C3L-00081	13	86170001	86290000	18	0.486401
C3L-00081	13	86290001	91830000	582	0.000000
C3L-00081	13	91830001	92540000	72	-0.411977
C3L-00081	13	92540001	114364328	2213	0.000000
C3L-00081	14	1	16070000	1608	1.735342
C3L-00081	14	16070001	17200000	117	-0.131241
C3L-00081	14	17200001	18220000	103	0.000000
C3L-00081	14	20040001	26100000	482	-0.496999
C3L-00081	14	26100001	45940000	2009	0.000000
C3L-00081	14	45940001	45990000	5	0.131907
C3L-00081	14	45990001	107043718	6355	0.000000
C3L-00081	15	1	18360000	1881	-0.329885
C3L-00081	15	18360001	54440000	2885	0.000000
C3L-00081	15	54440001	54490000	6	-0.156236
C3L-00081	15	54490001	77330000	2453	0.000000
C3L-00081	15	77330001	77480000	19	-0.409566
C3L-00081	15	77480001	87190000	919	0.000000
C3L-00081	15	87190001	87330001	13	-0.107473
C3L-00081	15	87430001	94070000	627	0.000000
C3L-00081	15	94070001	94160000	10	-0.728152
C3L-00081	15	94160001	101950000	709	0.000000
C3L-00081	15	101950001	101991189	8	0.266174
C3L-00081	16	1	1750001	129	0.000000
C3L-00081	16	1770000	1800000	6	0.135573
C3L-00081	16	1800001	1960000	22	0.000000
C3L-00081	16	1960001	2240000	40	0.108032
C3L-00081	16	2240001	2960000	76	0.000000
C3L-00081	16	2960001	3030000	11	0.122287
C3L-00081	16	3030001	31840000	2077	0.000000
C3L-00081	16	46470000	59240000	1337	2.534933
C3L-00081	16	59240001	64280000	539	2.372815
C3L-00081	16	64280001	64390000	13	1.941879
C3L-00081	16	64390001	64620000	28	2.427710
C3L-00081	16	64620001	64670000	6	2.214269
C3L-00081	16	64670001	65190000	70	2.433844
C3L-00081	16	65190001	68900000	411	2.634169
C3L-00081	16	68900001	69040000	17	1.941879
C3L-00081	16	69040001	70500000	145	2.714241
C3L-00081	16	70500001	75620000	533	0.285938
C3L-00081	16	75620001	90338345	1221	-0.345638
C3L-00081	17	1	110000	13	0.000000
C3L-00081	17	110001	11340000	984	-0.458343
C3L-00081	17	11340001	70790000	5677	0.000000
C3L-00081	17	70790001	70840000	7	0.120941
C3L-00081	17	70840001	83257441	1180	0.000000
C3L-00081	18	1	80373285	7219	0.000000
C3L-00081	19	1	90001	12	0.307494
C3L-00081	19	280000	58617616	5493	0.000000
C3L-00081	20	1	11030000	953	0.531362
C3L-00081	20	11030001	11060000	5	0.761141
C3L-00081	20	11060001	12810000	190	0.531362
C3L-00081	20	12910001	62320000	4688	0.000000
C3L-00081	20	62320001	62560000	32	0.150764
C3L-00081	20	62560001	64444167	132	0.000000
C3L-00081	21	1	5910000	634	0.000000
C3L-00081	21	5910001	6170000	40	-0.111940
C3L-00081	21	6170001	6940000	122	0.000000
C3L-00081	21	6940001	7150000	33	0.120613
C3L-00081	21	7150001	7380000	31	0.000000
C3L-00081	21	7380001	7700000	44	0.113979
C3L-00081	21	7700001	7870000	29	-0.140481
C3L-00081	21	7870001	8480000	90	0.000000
C3L-00081	21	8480001	9380000	142	0.128907
C3L-00081	21	9380001	10000000	92	0.000000
C3L-00081	21	10000001	10050000	10	-0.191258
C3L-00081	21	10050001	10330001	44	0.000000
C3L-00081	21	13970000	44120000	3015	-0.118908
C3L-00081	21	44120001	44330000	32	0.000000
C3L-00081	21	44330001	46709983	149	-0.155115
C3L-00081	22	1	11230000	1157	0.000000
C3L-00081	22	11230001	11360000	20	1.029736
C3L-00081	22	11360001	11610000	38	0.000000
C3L-00081	22	11610001	11640000	6	1.130216
C3L-00081	22	11640001	12230000	97	0.000000
C3L-00081	22	12230001	12440000	35	0.591398
C3L-00081	22	12440001	12590000	21	0.000000
C3L-00081	22	12590001	12650000	11	0.851327
C3L-00081	22	12650001	45940000	2718	0.000000
C3L-00081	22	45940001	46130000	25	0.102358
C3L-00081	22	46130001	50818468	317	0.000000
C3L-00081	X	1	10550000	294	0.000000
C3L-00081	X	10550001	11030000	56	-0.360695
C3L-00081	X	11030001	123770000	9555	0.000000
C3L-00081	X	123770001	123870000	11	0.120225
C3L-00081	X	123870001	156040895	2592	0.000000
C3L-00081	Y	1	11340000	1223	0.000000
C3L-00081	Y	11340001	11470000	25	1.330296
C3L-00081	Y	11470001	20290000	956	0.000000
C3L-00081	Y	20290001	20330000	6	-0.740772
C3L-00081	Y	20330001	57227415	3749	0.000000
C3L-00415	1	1	158390000	12786	0.000000
C3L-00415	1	158390001	158440000	7	-0.330457
C3L-00415	1	158440001	184700000	2794	0.000000
C3L-00415	1	184700001	193510000	911	-0.314517
C3L-00415	1	193510001	193560000	7	0.000000
C3L-00415	1	193560001	195660000	210	-0.315878
C3L-00415	1	195660001	195700000	5	0.000000
C3L-00415	1	195700001	195920000	19	-0.325740
C3L-00415	1	195920001	203070000	777	0.000000
C3L-00415	1	203070001	203440000	40	0.144614
C3L-00415	1	203440001	225830000	2384	0.000000
C3L-00415	1	225830001	226230000	38	0.159028
C3L-00415	1	226230001	248956422	2098	0.000000
C3L-00415	2	1	133550000	11983	0.000000
C3L-00415	2	133550001	134000000	51	0.147041
C3L-00415	2	134000001	169740000	3810	0.000000
C3L-00415	2	169740001	203800000	3487	0.128355
C3L-00415	2	203800001	228690000	2676	0.000000
C3L-00415	2	228690001	242193529	1309	0.138705
C3L-00415	3	1	88760000	8328	0.000000
C3L-00415	3	88760001	103340000	1604	0.149129
C3L-00415	3	103340001	105770000	271	0.000000
C3L-00415	3	105770001	105910000	17	0.159098
C3L-00415	3	105910001	112170000	652	0.000000
C3L-00415	3	112170001	116090000	424	0.154387
C3L-00415	3	116090001	198295559	8404	0.807334
C3L-00415	4	1	3870001	304	0.000000
C3L-00415	4	4190001	5700000	156	-0.199295
C3L-00415	4	5700001	174410000	16646	0.000000
C3L-00415	4	174410001	174950000	58	-0.200099
C3L-00415	4	174950001	190214555	982	0.000000
C3L-00415	5	1	69210000	6376	0.000000
C3L-00415	5	69210001	69390000	19	0.624948
C3L-00415	5	69390001	72440000	124	0.000000
C3L-00415	5	72440001	73330000	93	0.686241
C3L-00415	5	73330001	73660000	36	0.855038
C3L-00415	5	73660001	79890000	619	0.000000
C3L-00415	5	79890001	81140000	130	0.688034
C3L-00415	5	81140001	85230000	413	0.000000
C3L-00415	5	85230001	85540000	34	0.679619
C3L-00415	5	85540001	181538259	9508	0.000000
C3L-00415	6	1	90000	11	0.559484
C3L-00415	6	90001	170805979	16472	0.000000
C3L-00415	7	1	25740000	2257	0.000000
C3L-00415	7	25740001	26420000	63	0.128495
C3L-00415	7	26420001	73510000	4018	0.000000
C3L-00415	7	73510001	74690000	130	-0.186965
C3L-00415	7	74690001	159345973	8201	0.000000
C3L-00415	8	1	80001	10	0.000000
C3L-00415	8	670001	41500000	3818	-0.202478
C3L-00415	8	41500001	42860000	170	0.630016
C3L-00415	8	42860001	100810000	5830	0.000000
C3L-00415	8	100810001	101120000	35	0.149634
C3L-00415	8	101120001	144180001	4444	0.000000
C3L-00415	8	145079319	145138636	7	0.335943
C3L-00415	9	1	40001	6	0.702135
C3L-00415	9	790000	3630000	235	0.000000
C3L-00415	9	3730001	5430000	143	0.657928
C3L-00415	9	5430001	7790000	130	0.000000
C3L-00415	9	7790001	15970000	664	0.576986
C3L-00415	9	15970001	16070000	14	0.000000
C3L-00415	9	16070001	17400000	155	0.613728
C3L-00415	9	17400001	18670000	140	0.000000
C3L-00415	9	18670001	18890000	27	0.664917
C3L-00415	9	18890001	19580000	83	0.000000
C3L-00415	9	19580001	19960000	45	0.552539
C3L-00415	9	19960001	21720000	193	0.656182
C3L-00415	9	21720001	21830000	17	0.269084
C3L-00415	9	21830001	22090000	41	-0.349785
C3L-00415	9	22090001	22200000	15	0.236840
C3L-00415	9	22200001	22260000	9	-0.287436
C3L-00415	9	22260001	22360000	13	0.000000
C3L-00415	9	22360001	25400000	354	0.619468
C3L-00415	9	25400001	25770000	44	0.000000
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C3N-04162	Y	11530001	11600000	8	-0.644260
C3N-04162	Y	11600001	20050000	905	0.000000
C3N-04162	Y	20050001	20350000	43	-0.456306
C3N-04162	Y	20350001	23230000	321	0.000000
C3N-04162	Y	23230001	23280000	7	-0.648253
C3N-04162	Y	23280001	24770000	152	0.000000
C3N-04162	Y	24770001	24900000	17	-0.427395
C3N-04162	Y	24900001	56780000	3202	0.000000
C3N-04162	Y	56780001	57227415	47	0.164491