Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-CS-4938-01B-11D-1892-01	TCGA-CS-4941-01A-01D-1466-01	TCGA-CS-4942-01A-01D-1466-01	TCGA-CS-4943-01A-01D-1466-01	TCGA-CS-4944-01A-01D-1466-01	TCGA-CS-5390-01A-02D-1466-01	TCGA-CS-5393-01A-01D-1466-01	TCGA-CS-5394-01A-01D-1466-01	TCGA-CS-5395-01A-01D-1466-01	TCGA-CS-5396-01A-02D-1466-01	TCGA-CS-5397-01A-01D-1892-01	TCGA-CS-6186-01A-12D-2023-01	TCGA-CS-6188-01A-11D-1892-01	TCGA-CS-6290-01A-11D-1704-01	TCGA-CS-6665-01A-11D-1892-01	TCGA-CS-6666-01A-11D-1892-01	TCGA-CS-6667-01A-12D-2023-01	TCGA-CS-6668-01A-11D-1892-01	TCGA-CS-6669-01A-11D-1892-01	TCGA-CS-6670-01A-11D-1892-01	TCGA-DB-5270-01A-02D-1466-01	TCGA-DB-5273-01A-01D-1466-01	TCGA-DB-5274-01A-01D-1466-01	TCGA-DB-5275-01A-01D-1466-01	TCGA-DB-5276-01A-01D-1466-01	TCGA-DB-5277-01A-01D-1466-01	TCGA-DB-5278-01A-01D-1466-01	TCGA-DB-5279-01A-01D-1466-01	TCGA-DB-5280-01A-01D-1466-01	TCGA-DB-5281-01A-01D-1466-01	TCGA-DH-5140-01A-01D-1466-01	TCGA-DH-5141-01A-01D-1466-01	TCGA-DH-5142-01A-01D-1466-01	TCGA-DH-5143-01A-01D-1466-01	TCGA-DH-5144-01A-01D-1466-01	TCGA-DU-5847-01A-11D-1704-01	TCGA-DU-5849-01A-11D-1704-01	TCGA-DU-5851-01A-13D-1892-01	TCGA-DU-5852-01A-11D-1704-01	TCGA-DU-5853-01A-11D-1892-01	TCGA-DU-5854-01A-11D-1704-01	TCGA-DU-5855-01A-11D-1704-01	TCGA-DU-5870-01A-11D-1704-01	TCGA-DU-5871-01A-12D-1704-01	TCGA-DU-5872-01A-11D-1704-01	TCGA-DU-5874-01A-11D-1704-01	TCGA-DU-6392-01A-11D-1704-01	TCGA-DU-6393-01A-11D-1704-01	TCGA-DU-6394-01A-11D-1704-01	TCGA-DU-6395-01A-12D-1704-01	TCGA-DU-6396-01A-11D-1704-01	TCGA-DU-6397-01A-11D-1704-01	TCGA-DU-6399-01A-12D-1704-01	TCGA-DU-6400-01A-12D-1704-01	TCGA-DU-6401-01A-11D-1704-01	TCGA-DU-6402-01A-11D-1704-01	TCGA-DU-6403-01A-11D-1704-01	TCGA-DU-6404-01A-11D-1704-01	TCGA-DU-6405-01A-11D-1704-01	TCGA-DU-6406-01A-11D-1704-01	TCGA-DU-6407-01A-13D-1704-01	TCGA-DU-6408-01A-11D-1704-01	TCGA-DU-6410-01A-11D-1892-01	TCGA-DU-6542-01A-11D-1892-01	TCGA-DU-7006-01A-11D-2023-01	TCGA-DU-7007-01A-11D-2023-01	TCGA-DU-7008-01A-11D-2023-01	TCGA-DU-7009-01A-11D-2023-01	TCGA-DU-7010-01A-11D-2023-01	TCGA-DU-7011-01A-11D-2023-01	TCGA-DU-7012-01A-11D-2023-01	TCGA-DU-7013-01A-11D-2023-01	TCGA-DU-7014-01A-11D-2023-01	TCGA-DU-7015-01A-11D-2023-01	TCGA-DU-7018-01A-11D-2023-01	TCGA-DU-7019-01A-11D-2023-01	TCGA-DU-7290-01A-11D-2023-01	TCGA-DU-7292-01A-11D-2023-01	TCGA-DU-7294-01A-11D-2023-01	TCGA-DU-7298-01A-11D-2023-01	TCGA-DU-7299-01A-21D-2023-01	TCGA-DU-7300-01A-21D-2085-01	TCGA-DU-7301-01A-11D-2085-01	TCGA-DU-7302-01A-11D-2085-01	TCGA-DU-7304-01A-12D-2085-01	TCGA-DU-7306-01A-11D-2085-01	TCGA-DU-7309-01A-11D-2085-01	TCGA-E1-5302-01A-01D-1466-01	TCGA-E1-5303-01A-01D-1466-01	TCGA-E1-5304-01A-01D-1466-01	TCGA-E1-5305-01A-01D-1892-01	TCGA-E1-5307-01A-01D-1892-01	TCGA-E1-5311-01A-01D-1466-01	TCGA-E1-5318-01A-01D-1466-01	TCGA-E1-5319-01A-01D-1892-01	TCGA-E1-5322-01A-01D-1466-01	TCGA-EZ-7264-01A-11D-2023-01	TCGA-FG-5962-01B-11D-1892-01	TCGA-FG-5963-01A-11D-1704-01	TCGA-FG-5964-01A-11D-1704-01	TCGA-FG-5965-01B-11D-1892-01	TCGA-FG-6688-01A-11D-1892-01	TCGA-FG-6689-01A-11D-1892-01	TCGA-FG-6690-01A-11D-1892-01	TCGA-FG-6691-01A-11D-1892-01	TCGA-FG-6692-01A-11D-1892-01	TCGA-FG-7634-01A-11D-2085-01	TCGA-FG-7636-01A-11D-2085-01	TCGA-FG-7638-01B-11D-2085-01	TCGA-FG-7643-01A-11D-2085-01	TCGA-FN-7833-01A-11D-2085-01	TCGA-HT-7467-01A-11D-2023-01	TCGA-HT-7468-01A-11D-2023-01	TCGA-HT-7470-01A-12D-2085-01	TCGA-HT-7472-01A-11D-2023-01	TCGA-HT-7473-01A-11D-2023-01	TCGA-HT-7474-01A-11D-2023-01	TCGA-HT-7475-01A-11D-2023-01	TCGA-HT-7476-01A-11D-2023-01	TCGA-HT-7478-01A-11D-2023-01	TCGA-HT-7479-01A-11D-2023-01	TCGA-HT-7480-01A-11D-2085-01	TCGA-HT-7481-01A-11D-2023-01	TCGA-HT-7482-01A-11D-2023-01	TCGA-HT-7483-01A-11D-2023-01	TCGA-HT-7485-01A-11D-2023-01	TCGA-HT-7601-01A-11D-2085-01	TCGA-HT-7602-01A-21D-2085-01	TCGA-HT-7603-01A-21D-2085-01	TCGA-HT-7604-01A-11D-2085-01	TCGA-HT-7605-01A-11D-2085-01	TCGA-HT-7606-01A-11D-2085-01	TCGA-HT-7607-01A-11D-2085-01	TCGA-HT-7608-01A-11D-2085-01	TCGA-HT-7609-01A-11D-2085-01	TCGA-HT-7610-01A-21D-2085-01	TCGA-HW-7486-01A-11D-2023-01	TCGA-HW-7487-01A-11D-2023-01	TCGA-HW-7489-01A-11D-2023-01	TCGA-HW-7490-01A-11D-2023-01	TCGA-HW-7491-01A-11D-2023-01	TCGA-HW-7493-01A-11D-2023-01	TCGA-HW-7495-01A-11D-2023-01	TCGA-IK-7675-01A-11D-2085-01	
Amplification Peak 1	1q32.1  	chr1:203710591-204630921(probes 100783:101422)	chr1:204436521-204488590(probes 101253:101275)	chr1:203195690-204961308(probes 100446:101688)	1.4959e-07	 1.4959e-07		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	1	0	0	0	0	0	0	2	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 2	4q12    	chr4:48068784-56491855(probes 395157:397715)    	chr4:55877830-56051981(probes 397386:397473)    	chr4:53949829-56493404(probes 395867:397717)    	0.018356	   0.018356		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	2	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 3	7p11.2  	chr7:54942676-55107468(probes 699183:699313)    	chr7:54944082-55107195(probes 699184:699312)    	chr7:54068619-56282618(probes 698621:700058)    	1.6527e-24	 1.6527e-24		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	2	1	0	0	0	2	0	1	0	1	1	2	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	2	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	2	1	2	2	1	0	1	0	1	0	0	0	0	0	1	2	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	2	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 4	12p13.32	chr12:3496687-4659158(probes 1057279:1058117)    	chr12:4530142-4602560(probes 1058038:1058091)    	chr12:1-7458621(probes 1056075:1060018)           	0.00045132	 0.00045132		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 5	12q14.1 	chr12:58125396-58163019(probes 1085697:1085719)	chr12:58125439-58162738(probes 1085698:1085718)	chr12:57886610-58537349(probes 1085590:1085935)	7.3432e-11	 7.3432e-11		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	
Amplification Peak 6	19q13.2 	chr19:40246077-40291097(probes 1417600:1417635)	chr19:40246341-40290275(probes 1417601:1417634)	chr19:40246341-40294952(probes 1417601:1417637)	0.11431	    0.11431		0: t<0.3; 1: 0.3<t< 0.9; 2: t>0.9	0	0	1	0	2	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  1	1p36.23 	chr1:1-28845930(probes 1:13400)                    	chr1:7829434-8090227(probes 2872:3027)              	chr1:7452023-8567431(probes 2647:3253)              	0.10174	    0.10174		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	1	0	1	0	0	1	1	0	0	1	1	0	0	0	1	0	0	1	0	1	0	1	0	0	0	1	0	1	1	0	1	1	0	1	1	0	1	0	1	0	0	1	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	1	0	1	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	1	1	1	0	1	1	0	1	0	0	0	0	0	1	1	0	1	0	0	1	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	1	1	0	0	1	1	0	0	1	0	1	0	
Deletion Peak  2	1q44    	chr1:234036808-249250621(probes 120490:129201)  	chr1:247686455-249250621(probes 129117:129201)  	chr1:247690418-247692282(probes 129121:129122)  	0.10804	     0.1081		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  3	2p25.3  	chr2:1-243199373(probes 129202:260562)             	chr2:2322141-2332195(probes 129648:129652)          	chr2:2327999-2332195(probes 129651:129652)          	0.23562	    0.24564		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  4	2q37.3  	chr2:233736245-243199373(probes 255170:260562)  	chr2:240878347-243199373(probes 259706:260562)  	chr2:232343111-243199373(probes 254616:260562)  	1.1914e-09	 1.1914e-09		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	
Deletion Peak  5	3p14.3  	chr3:1-198022430(probes 260563:366989)            	chr3:57606401-57686559(probes 292717:292744)      	chr3:57645375-57654186(probes 292731:292732)      	0.2449	    0.24564		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  6	3q13.31 	chr3:89150943-138203274(probes 310922:336552)    	chr3:116426639-116440933(probes 324037:324044)  	chr3:116034713-117588027(probes 323746:324952)  	0.10804	     0.1081		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	
Deletion Peak  7	3q29    	chr3:194502405-198022430(probes 366258:366989)  	chr3:196365920-198022430(probes 366853:366989)  	chr3:196970126-198022430(probes 366855:366989)  	0.14672	    0.14114		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  8	4q35.1  	chr4:169416144-191154276(probes 459848:469783)  	chr4:183534656-184213557(probes 467727:467728)  	chr4:148522361-191154276(probes 448343:469783)  	2.4912e-06	 2.4912e-06		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	1	0	1	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	1	0	1	0	0	0	0	0	1	0	0	0	1	0	1	0	1	1	0	0	1	0	0	0	1	0	1	0	0	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	
Deletion Peak  9	6p24.1  	chr6:1-15538684(probes 570337:580589)              	chr6:13279389-13331096(probes 579174:579218)      	chr6:12703053-13591685(probes 578719:579429)      	0.07614	    0.07614		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	
Deletion Peak 10	6q12    	chr6:57206295-82464215(probes 604256:615335)      	chr6:64422985-66417935(probes 605252:606248)      	chr6:65423479-65424005(probes 605751:605752)      	0.13046	     0.1275		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 11	9p21.3  	chr9:21991753-22448737(probes 843324:843626)      	chr9:21991924-22125346(probes 843325:843434)      	chr9:20036747-29399549(probes 841967:847638)      	6.9653e-37	 6.9653e-37		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	2	0	0	1	0	2	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	1	1	0	0	0	0	2	0	1	2	0	1	1	0	0	0	0	0	0	0	1	0	0	1	0	0	1	1	0	1	2	1	0	0	1	2	0	0	0	0	0	1	0	1	0	1	1	0	1	0	1	0	0	1	1	1	1	0	0	0	1	0	0	0	0	0	0	1	0	1	1	2	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	
Deletion Peak 12	10q26.13	chr10:111624142-135534747(probes 963343:978784)	chr10:118301522-135534747(probes 967971:978784)	chr10:111744671-135534747(probes 963424:978784)	0.0010176	  0.0010176		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	1	0	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	1	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	1	1	1	0	0	0	1	1	0	0	1	0	1	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	
Deletion Peak 13	11p15.5 	chr11:1-71303995(probes 978785:1016367)            	chr11:1-1920254(probes 978785:979179)               	chr11:1-5948237(probes 978785:981342)               	0.020932	   0.022809		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	
Deletion Peak 14	11q14.1 	chr11:79148041-87846595(probes 1020614:1026010)  	chr11:82436793-82446910(probes 1022799:1022800)  	chr11:82233046-82485301(probes 1022753:1022816)  	0.18231	    0.18746		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 15	14q24.3 	chr14:58901446-80681882(probes 1207586:1220961)  	chr14:75889234-75942922(probes 1217660:1217709)  	chr14:69539789-79190913(probes 1213835:1219938)  	0.01465	   0.014571		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	1	0	0	1	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	1	1	1	0	0	1	0	1	0	0	0	0	1	1	0	0	1	0	0	0	1	0	0	0	0	0	1	1	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 16	15q21.1 	chr15:1-65284370(probes 1236202:1259582)         	chr15:48411822-48638342(probes 1248644:1248754)  	chr15:48384908-48901419(probes 1248632:1248937)  	0.18592	    0.18746		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	
Deletion Peak 17	17q25.3 	chr17:80379333-81195210(probes 1358269:1358571)  	chr17:80692067-81195210(probes 1358453:1358571)  	chr17:80703381-80714326(probes 1358456:1358457)  	0.19934	     0.2067		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	
Deletion Peak 18	19q13.41	chr19:42881099-59128983(probes 1418723:1425219)  	chr19:52838750-53041106(probes 1422751:1422797)  	chr19:42685298-59128983(probes 1418673:1425219)  	7.6233e-09	   0.058439		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	1	1	0	1	0	1	0	0	0	0	0	0	0	2	0	1	0	1	1	1	0	1	1	1	0	0	0	1	1	0	1	0	1	1	0	0	0	0	1	0	1	1	0	1	1	0	1	1	1	1	0	0	0	0	0	0	0	1	1	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	1	0	1	0	1	0	1	1	1	0	0	1	0	1	1	1	1	1	1	0	1	1	0	0	1	0	0	1	1	1	0	0	1	1	0	1	0	0	1	0	0	0	1	1	0	0	0	1	0	0	0	1	1	0	1	0	1	1	1	0	0	1	0	1	0	
Deletion Peak 19	19q13.43	chr19:54037464-59128983(probes 1423098:1425219)  	chr19:57167024-57185745(probes 1424323:1424326)  	chr19:42685298-59128983(probes 1418673:1425219)  	3.3971e-10	 1.5129e-08		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	1	0	1	1	0	1	0	1	0	0	0	1	0	1	0	1	0	1	1	1	1	1	0	1	1	1	0	0	0	1	1	0	1	0	1	1	0	0	0	0	1	0	1	1	0	1	1	0	1	1	1	1	0	0	0	0	0	0	0	1	1	1	0	1	0	1	1	0	1	0	0	0	1	0	0	0	1	1	0	1	0	1	0	1	1	1	0	0	1	0	1	1	1	1	1	1	0	1	1	0	0	1	0	0	1	1	1	0	0	1	1	0	1	0	0	1	0	0	0	1	1	0	1	0	1	0	0	0	1	1	0	1	1	1	1	1	0	0	1	0	1	0	
Deletion Peak 20	22q13.31	chr22:39424515-51304566(probes 1493837:1500050)  	chr22:44566797-51304566(probes 1496588:1500050)  	chr22:42128462-51304566(probes 1495163:1500050)  	0.076257	    0.07614		0: t>-0.3; 1: -0.3>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 1 - CN values	1q32.1  	chr1:203710591-204630921(probes 100783:101422)	chr1:204436521-204488590(probes 101253:101275)	chr1:203195690-204961308(probes 100446:101688)	1.4959e-07	 1.4959e-07		Actual Copy Change Given	0.0033299	0.43294	0.0058309	-0.028122	-0.0015243	0.0089497	-0.0021892	-0.001834	6	0.016845	0.55283	0.018287	-0.0036406	0.0023207	0.31482	0.064225	-0.03576	0.027216	9.7671e-05	0.0065884	-0.0064266	0.0045538	0.087882	0.0097816	0	0.11102	0.010006	0.020063	0.0045985	-0.0020784	0.016146	0.00052632	0.010982	0.0034687	0.028856	0.0012481	0.017404	-0.030417	0.0038854	0.00027728	-0.0019545	0.0081959	0.010982	-0.26729	0.023876	0.014209	0.2868	0.019749	0.015587	-0.0083005	0.0060548	0.01459	0.0056693	0.099199	0.0033762	0.0036076	5.7473	0.000139	0.0063871	-0.012776	0.0091462	0.0058004	0.0075677	0.011958	-0.079395	0.018671	0.021783	0.0058198	0.76945	0.0068044	0	0.022551	0.028903	0.45135	0.0084737	0.041461	0.43513	6	0.0078419	0.00097849	0.030451	0.00026363	-0.028458	0.0075	0.092694	-0.014372	0.0045686	-0.36125	0	-0.1685	-0.0012473	0.0063871	0.0095956	0.0558	0.012525	-0.21339	0.012208	0.25261	0.021323	0.0022246	0	5.5129	-0.017566	-0.0035625	0	0.65001	-0.0085349	-0.038012	-0.0087146	-0.024251	-0.011058	0.0054938	0.015028	0.015708	0.0019418	0.0022865	0.080168	0.55772	0.0026357	-0.0080244	0.0080639	0.0083351	0.0076653	-0.014799	0.0031121	0.022073	0.0025833	-0.052396	0.49662	-0.0083072	0.0068206	0.0043632	0.0029133	0.00597	-0.011198	0.0010258	0.0085737	0.01803	0	-0.039147	0.0097136	0.0056919	0.01523	0.047455	
Amplification Peak 2 - CN values	4q12    	chr4:48068784-56491855(probes 395157:397715)    	chr4:55877830-56051981(probes 397386:397473)    	chr4:53949829-56493404(probes 395867:397717)    	0.018356	   0.018356		Actual Copy Change Given	-0.0056757	-0.014366	-0.016841	3.8512	0.014749	-0.071873	-0.0071958	-0.017391	0.002018	0.01178	0.0040243	-0.010168	0.0071699	-0.003836	6	0.72187	0.0089155	-0.0175	0.00041593	-0.007544	-0.0039708	-0.0008316	-0.31307	-0.81414	-0.0049481	0.95583	0.0015255	-0.42963	-0.018628	0.033047	-0.011749	-0.012369	0.010842	-0.0035712	-0.063166	0.011818	-0.0062286	-0.0081624	-0.015329	-0.0027707	0.0098669	-0.0016629	-0.0012943	0.0043021	-0.012373	-0.021158	-0.012989	-0.037522	-0.0099565	-0.0077482	-0.0021324	-0.012381	-0.12119	-0.22194	0.0011556	-0.0042015	-0.017146	-0.0076623	0.0066011	0.0052498	-0.0058466	-0.031214	-0.2741	0.015674	0.032085	-0.0059403	-0.04275	-0.023519	0.59764	-0.0056757	-0.0042451	-0.021592	-0.05725	-0.006401	-0.71659	0	-0.027186	0.0025893	-0.64216	0.0043021	0.010146	-0.034535	0.037364	1.548	-0.011335	-0.0077482	0.46142	-0.13304	-0.099341	0.34096	0	0.072396	-0.34664	-0.02469	-0.022469	0.0052749	-0.018655	-0.45697	0.025812	-0.53721	-0.005313	-0.0064156	0.0038854	-0.0027089	-0.013066	0.0040243	-0.0078863	0	-0.20099	0.0039725	-0.0024376	-0.16764	-0.17271	-0.018216	0.013531	-0.0044329	0	0.025895	0.010761	-0.007472	-0.01961	-0.2292	-0.0062383	0.0021799	-0.00033961	0.019856	-0.013315	0.00097064	0.00072462	0.0079175	-0.0025027	-0.014056	-0.0069782	-0.014641	-0.0094046	-0.014363	-0.0036407	-0.28859	0.003191	0.0030783	-0.80347	-0.018609	-0.014641	0.050595	
Amplification Peak 3 - CN values	7p11.2  	chr7:54942676-55107468(probes 699183:699313)    	chr7:54944082-55107195(probes 699184:699312)    	chr7:54068619-56282618(probes 698621:700058)    	1.6527e-24	 1.6527e-24		Actual Copy Change Given	0.0090097	6	0.69092	0.0039467	0.013492	0.040782	1.7412	-0.0078863	0.79491	0.17543	0.5523	0.7199	6	0	0.35353	0.10555	0.0036736	0	-0.0044901	0.10964	0.51217	0.004719	0.0030522	0.020302	0.013708	0.055847	0	0.0095131	0.013074	0.019447	0.019923	0.0014562	0.46144	0.037782	-0.021416	0.011958	0.0034089	0.0094491	6	0.018548	6	-0.0031859	-0.0023553	0.010608	-0.022303	0.0072405	0.69063	0.0026027	0.0077783	0.7429	0.0068892	0	0.037934	0.10468	0.01609	0.55049	6	0.49057	6	6	0.73248	0.015556	0.81689	0.013048	0.67048	0.0038603	0.049591	-0.0028622	0.061651	0.20978	0.50279	6	0.20874	0.71091	0.025412	-0.0033991	0.0070826	6	0.030336	-0.0051713	0.0078079	0.0013458	-0.012148	-0.0031859	-0.02284	-0.050911	-0.017045	0.0041632	0.0037465	0.40111	0.0043021	0.021463	0.0072217	0.0039893	-0.00055444	0.02525	0.0017749	0.24694	0.035218	0.0070944	0.00081621	6	0.0037465	-0.00052235	0.66567	6	0.37545	0.062103	0.0080227	0.26938	0.0071502	0	-0.0011084	0.0041518	-0.020951	0.66145	0.029606	0.0075826	0.018803	0.0017219	0.031488	0.031014	0.00030331	0.0053489	0.0049097	0.0043513	0	0.0018553	-0.0087484	0.0081959	0.00029343	0.0025527	0	0	-0.0066432	0.071592	0	-1.5069e-05	0.0024214	-0.0031805	0.016932	0.064654	-0.00014516	0.037947	
Amplification Peak 4 - CN values	12p13.32	chr12:3496687-4659158(probes 1057279:1058117)    	chr12:4530142-4602560(probes 1058038:1058091)    	chr12:1-7458621(probes 1056075:1060018)           	0.00045132	 0.00045132		Actual Copy Change Given	0.063509	0.0058309	0.018803	5.1411	0.0024969	0.015447	0.017544	0.008892	-0.0081624	0.0092455	-0.013402	0.00097064	-0.00069303	-0.019457	-0.43181	-0.0031383	-0.0055141	0.010424	-0.0008316	0	0	0.89319	0.00064027	0.83302	-0.00024081	1.5954	0.011211	-0.4097	0.00041116	0.39828	0.00097064	0.0054436	-0.083465	-0.02151	0.010647	0	0.011403	-0.0067813	0.00027728	-0.060693	0.003191	0.013353	0.0065336	0.074984	-0.0015145	-0.0015057	0	0.009416	0.00802	1.4716	0.61781	0.0092276	0.11419	0.10463	-0.0071313	0.0036076	0.52748	0.00064082	-0.00064576	-0.006511	0.0068442	0.73754	-0.0069046	-0.19608	0	4.9022	0.035281	0.04448	-0.035447	-0.038578	0.0078264	-0.012195	0.024408	0.011644	-0.0059582	-0.004476	0.0095883	-0.0027707	0.00096429	0.0026357	1.5998	4.7673e-05	0	-0.0009446	0.15636	0.0093349	0.021031	-0.16599	0.66771	3.591	-0.0049165	0.014609	0.0063871	0.012097	0.0049884	0.0065262	0.10144	-0.037898	0.029466	0.00063269	0.47873	-0.0018425	0.0086135	0.37169	0.6653	-0.0038475	0.39446	0.022142	0.010424	0	0.002233	0.0012481	0.052809	0.010842	0.012097	0.50194	0.0041896	0.0031346	0.010146	0.51298	0.04614	0.028763	0.0059961	-0.0063155	0.041544	-0.018203	-0.018925	0.00069327	-0.0023875	1.8373	0.011958	0.019559	0.0023581	0.010842	0.068235	-0.0096257	0.017644	0.0052021	0.015866	0.0095883	-0.0032384	0.010564	0.012237	0.020496	
Amplification Peak 5 - CN values	12q14.1 	chr12:58125396-58163019(probes 1085697:1085719)	chr12:58125439-58162738(probes 1085698:1085718)	chr12:57886610-58537349(probes 1085590:1085935)	7.3432e-11	 7.3432e-11		Actual Copy Change Given	0.0093924	6	0.018803	0.017885	0.0024969	-0.0071666	0.017544	0.008892	-0.0081624	0.0092455	-0.013402	-0.0058326	-0.00069303	-0.11392	1.8485	-0.0031383	-0.00094254	0.010424	-0.0008316	0	0	-0.059942	0.00064027	-0.14562	-0.00024081	-0.34797	-0.0088526	-0.42193	0.0036076	0.020063	-0.010536	-0.0097951	-0.083465	-0.02151	0.010647	0	0.013632	-0.0067813	0.00027728	-0.060693	-0.0063242	0.0040243	0.0065336	-0.22702	0.0050264	-0.0015057	0	0.009416	0.00802	-0.0039385	-0.0073878	0.0092276	-0.045885	0.10463	-0.39893	-0.0082667	3.9381	0	-0.00064576	0.0035906	0.00073532	0.0092792	0	-0.19608	0	-0.37351	-0.20867	0	6	-0.038578	0.00054587	6	0.011206	0.0005749	0.0027745	0.00041593	0.0021299	-0.0027707	0.0033299	0.43868	-0.086253	4.7673e-05	0	0.0026357	0.0090312	0.0093349	0.00095924	-0.16599	0.0043021	-0.1422	0.4166	0.014609	0.0063871	1.5781	0.0077783	0.0065262	0.00030514	-0.018337	0.029466	0	-0.0050216	-0.0018425	-0.54411	-0.13042	-0.0042929	-0.0038475	0.36692	0.096404	0.029888	0	0.0062968	0.0012481	0.0063232	-0.16758	-0.04985	-0.0079277	-0.12016	0.011204	-0.003966	-0.55683	-0.018581	0.0023581	0.0059961	-0.0018661	-0.0013858	-0.010184	-0.018925	-0.00057261	0.0052409	-0.082402	0.0082121	-0.010027	0.0023581	0.0046013	-0.0050391	-0.0096257	0.0050191	0.0052021	0.015866	-0.0011314	-0.0032384	-0.062753	0.010049	6	
Amplification Peak 6 - CN values	19q13.2 	chr19:40246077-40291097(probes 1417600:1417635)	chr19:40246341-40290275(probes 1417601:1417634)	chr19:40246341-40294952(probes 1417601:1417637)	0.11431	    0.11431		Actual Copy Change Given	0.0052749	0.021043	0.71867	-0.26528	1.1451	-0.7403	0.024127	-0.77269	0.61734	-0.76189	0.096234	0.72232	0.28026	0.012279	-0.033677	0.091445	-0.01145	-0.76886	0.0045705	-0.61477	0.0011127	0.013632	-0.71069	-0.052614	0.0011458	-0.40026	-0.66835	-0.82489	-0.036401	-0.028901	-0.10788	-0.66406	-0.70792	0.0068044	-0.80202	-0.0081624	-0.55957	-0.41014	0.031859	-0.076586	-0.04211	-0.11116	-0.67242	0.030873	0.015617	-0.76508	0.00013863	-0.76773	-0.83946	0.0026357	0.02267	-0.68318	-0.02486	-0.73573	-0.016933	0.43868	0.0024969	0.029604	-0.044957	0.71847	0.022882	-0.70767	-0.84006	-0.025893	0.048228	-0.017164	-0.053934	-0.75013	6	-0.014503	-0.0063191	-0.0077814	-0.16539	-0.073509	-0.78623	-0.060748	0.017963	-0.015196	-0.81289	-0.67976	-0.042924	-0.60567	-0.089831	-0.80635	-0.012438	-0.034631	-0.013551	-0.021098	-0.017666	-0.16764	-0.73749	-0.022469	-0.6875	-0.75158	-0.59467	-0.74072	-0.80193	-0.60197	-0.057767	-0.54718	0.0015255	0.00065211	-0.0083005	-0.3357	0.020063	0.60503	-0.55717	-0.50896	-0.80384	0.22993	-0.026498	-0.32232	-0.81222	-0.033558	0.49753	0.010074	0.0029133	-0.77749	0.0057094	0.013911	0.00056179	-0.75831	-0.50015	-0.056505	-0.024661	0.0075493	0.02562	-0.08974	-0.0013014	0.003191	-0.6233	-0.83306	-0.31302	-0.70334	0.00597	0.026991	-0.47335	-0.51061	-0.052126	0.00038788	-0.84974	-0.0095426	-0.56525	-0.070402	
Deletion Peak  1 - CN values	1p36.23 	chr1:1-28845930(probes 1:13400)                    	chr1:7829434-8090227(probes 2872:3027)              	chr1:7452023-8567431(probes 2647:3253)              	0.10174	    0.10174		Actual Copy Change Given	0.0033299	0.44359	0.0058309	-0.065093	-0.017464	-0.74846	0.01127	-0.81122	-0.065607	-0.80551	0.0030522	-0.049965	-0.010508	0.0013361	0.31482	-0.0065543	0.002104	-0.84198	9.7671e-05	-0.64912	0.0056415	0.0045538	-0.74474	-0.70726	0	0.050307	-0.69094	-0.84808	-0.0060949	-0.026441	0.0059687	-0.7135	0.010982	0.0034687	-0.86342	-0.0040828	-0.57962	-0.030417	-0.41827	-0.00088328	-0.017281	0.0018422	-0.71146	-0.075458	-0.36881	-0.79694	0.032281	-0.79913	-0.8694	0.0026164	-0.31054	-0.68802	0.0056693	-0.78732	0	-0.42931	0.020203	0.010093	-1.1849	-0.050988	0.029061	-0.0034931	-0.88831	0	-0.3725	0.0032367	0.018422	-0.75751	0.65231	0.021603	0	0.040792	-0.17986	0	-0.82158	-0.0017559	-0.62226	-0.0017522	-0.81252	0.0012078	-0.037069	-0.61722	-0.016841	-0.81511	0.0054158	-0.0066658	-0.0084458	0.015447	0	0.28467	-0.049154	-0.015912	-0.68988	-0.78883	-0.58029	-0.03906	-0.83577	-0.63071	-0.054825	-0.55261	-0.023083	0.003011	-0.017566	0.010999	0.033185	-0.78143	-0.58343	-0.038012	-0.81005	0.0022963	-0.0033243	-0.33063	-0.8248	0.032422	-0.0075625	0.0022865	0.080168	-0.073664	-0.0092974	-0.0080244	0.0080639	-0.80402	-0.51556	0.0049319	-0.0044312	0.0016541	0.031032	-0.052396	0.0012141	0.014749	-0.63565	0.023202	-0.33022	-0.71748	-0.011198	0.0010258	-0.49039	-0.52864	0	-0.039147	-0.85764	0.0053409	-0.57305	-0.0080244	
Deletion Peak  2 - CN values	1q44    	chr1:234036808-249250621(probes 120490:129201)  	chr1:247686455-249250621(probes 129117:129201)  	chr1:247690418-247692282(probes 129121:129122)  	0.10804	     0.1081		Actual Copy Change Given	0.0033299	0.43294	-0.02436	-0.82648	-0.0015243	0.0089497	-0.0021892	-0.013953	0.00097064	0.016845	-0.0015243	0.031999	-0.0036406	-0.0021749	0.31482	0.064225	-0.053657	0.0079094	0.006109	0.0065884	0.0026813	0.0045538	0.087882	-0.00098227	0.002117	0.71376	0.010006	0.020063	-0.02835	-0.01648	0.014087	0.0045106	0.010982	0.0034687	0.013253	0.0012481	0.0067685	-0.030417	-0.0059522	0.00027728	0.0022193	0.0081959	0.010982	-0.26729	0.013848	0.014209	0.30423	0.019749	0.015587	-0.0083005	-0.29572	0.01459	-0.0049319	0.08644	0.0033762	0.0036076	-0.00041585	0.00091819	0.013772	-0.012315	0.0091462	0.0058004	-0.0060918	-0.61424	-0.10282	0.026881	0.021783	0.0069907	0.37199	-0.05066	0.0026836	0.022551	0.028903	-0.49676	-0.022512	0.035383	0.43513	0.0033299	0.014051	0.00097849	0.005902	-0.0095214	-0.0013858	0.0075	0.087763	-0.014372	0.0045686	-0.36125	0	1.4759	-0.0012473	0.0063871	0.016565	0.048726	0.0024969	-0.21339	0.0076691	0.2237	0.021323	-0.0015849	0	-0.005302	-0.03245	-0.0035625	0	0.0082738	-0.0085349	-0.038012	-0.018983	-0.024251	-0.81005	-0.003525	0.014816	-0.00027724	-0.0044008	0.0022865	0.080168	0.504	-0.032212	-0.060832	0.0080639	0.0083351	0.0076653	-0.042304	0.0031121	-0.75561	-0.0039285	-0.052396	-0.0029429	-0.013472	0.0068206	0.018299	0.0029133	0.00597	-0.011198	-0.014443	0.0085737	0.0005154	0	-0.007472	0.003972	0.0056919	0.01523	0.047455	
Deletion Peak  3 - CN values	2p25.3  	chr2:1-243199373(probes 129202:260562)             	chr2:2322141-2332195(probes 129648:129652)          	chr2:2327999-2332195(probes 129651:129652)          	0.23562	    0.24564		Actual Copy Change Given	0.0024075	-0.0016629	-0.0011087	-0.77035	0.00597	0.0029133	-0.042517	0.0029133	0.067232	-0.016841	-0.0034049	-0.1071	-0.0027707	0.00031925	-0.015604	-0.1698	-0.036513	-0.0136	0.0026357	-0.0099565	0.0099127	0.0066653	0.24934	-0.049237	0.0043386	-1.5	-0.0051227	0	-0.01476	0.32963	0.045849	-0.0054683	0.051387	-0.0047079	0.0099508	-0.00055444	-0.0020558	0.0023581	-0.0008316	0.0024969	0.001646	0	-0.0033243	-0.35068	0.0041927	-0.0070638	0.00083195	0.0041302	0.012097	0.0066653	-0.29407	-0.045057	0.0076489	0.079216	-0.048568	0.0036076	0.0063871	0.003694	-0.010922	-0.0049471	0.71116	-0.0061937	-0.014614	0.012934	0.043102	-0.00060807	0.0081434	-0.0082537	-0.35433	0.00013863	-0.0029997	0.034643	-0.28691	-0.0013397	-0.043236	-0.073048	-0.0078863	0.0041632	-0.016745	-0.048569	0.001803	-0.0057166	-0.0090751	-0.013473	-0.0010613	0.012237	-0.046729	0	-0.00059214	1.4283	0.0030762	-0.57021	-0.012903	-0.0087146	-0.025428	0	-0.027176	-0.00099223	0.0098669	-0.010128	0.0077783	-0.013876	0.0033299	-0.010077	0.00097064	0	-0.00019808	-0.0063439	-0.0013858	-0.0214	0.001803	-0.019314	-0.010784	-0.017755	0.001803	0.82793	-0.00027724	0.0049404	0.0062481	-0.02955	-0.015872	-0.0013858	0.0014128	-0.0028354	0	-0.0013368	0.0077274	0	0.00028049	-0.021798	-0.0030314	0.014386	-0.00055444	-0.0062648	0	0.0069988	-0.0022564	-0.0058863	-0.0010135	0.00069327	-0.020876	-0.065045	-7.4996e-06	-0.035731	
Deletion Peak  4 - CN values	2q37.3  	chr2:233736245-243199373(probes 255170:260562)  	chr2:240878347-243199373(probes 259706:260562)  	chr2:232343111-243199373(probes 254616:260562)  	1.1914e-09	 1.1914e-09		Actual Copy Change Given	0.00063578	-0.0090547	-0.0011087	-0.12635	-0.011428	-0.0057864	0.0094061	0.037641	0.063509	-0.016841	-0.60012	0.0071336	-0.016704	0.00031925	-0.01106	-0.86531	0.013516	0.074121	0.0026357	-0.0076101	-0.41242	-0.072064	0.23943	-0.082918	0.0043386	-0.30482	-0.0051227	-0.017941	-0.014588	-0.48712	0.033905	-0.00062365	-0.22318	-0.0047079	-0.0029091	-0.019005	0.046275	0.010424	0.00083195	0.0024969	-0.00097017	-0.70446	-0.012438	0	0.0041927	0.037237	0.00083195	-0.021817	0.050819	-0.77286	-0.65895	-0.0052043	-0.043944	0.10322	0.016472	-0.006822	-0.0025276	0.0057783	-0.029721	-0.039191	-0.7855	-0.24482	-0.018561	-0.23802	0.022073	-0.75645	-0.78806	-0.0082537	0.030451	-0.020128	-0.0029997	0.033938	-0.18584	-0.028517	-0.036321	-0.04368	-0.0028164	-0.0041145	-0.012576	0.0030522	-0.017636	-0.0097213	0.010179	-0.012024	-0.84419	-0.859	-0.098181	0	0.00027728	-0.36601	0.00083195	0.023426	-0.012903	-0.013024	0.0051484	0.0080567	0.021105	0.016135	0.024969	-0.012774	-0.015604	-0.0010716	-0.014683	-0.010077	-0.0013858	0	-0.0048777	-0.0063439	0.018803	-0.00097017	-0.065321	-0.0033202	-0.015604	0	0.030169	-0.7127	-0.032996	-0.036729	-0.013474	0.005025	-0.015872	-0.012631	-0.0037503	-0.029102	0	-0.0013368	-0.61435	0	0	-0.016292	-0.003585	-0.84071	-0.0010182	0.0351	0	0	-0.0022564	-0.0058863	-0.060326	0.00069327	-0.0032761	-0.24014	0	-0.9597	
Deletion Peak  5 - CN values	3p14.3  	chr3:1-198022430(probes 260563:366989)            	chr3:57606401-57686559(probes 292717:292744)      	chr3:57645375-57654186(probes 292731:292732)      	0.2449	    0.24564		Actual Copy Change Given	-0.0033782	0.0048579	-0.002579	-0.073662	0.0096543	0.0049217	0	0	0.0036076	0.0058309	0.0041632	-0.0024938	0.0015264	-0.0031951	-0.021098	-0.2	0.0098469	0.80509	0.0029133	-0.0030475	-0.00068403	0.0020805	0	0.010618	0.0054504	-0.79048	0.0065262	0.020807	0.018943	0.027216	0	-0.0028298	-0.039258	0.0041632	0.021121	0.0043021	0.0081959	0.0033299	0.0033299	0.0037313	0	-0.016841	0.009076	0.078871	0.0088349	0	0.0051359	0	0.027638	0.045807	-0.29844	0.0026531	0.020308	0.10205	0.15851	-4.0168e-05	0.0013109	-0.0064509	0.011051	0.0092846	-0.023001	-0.03248	0.0056608	-0.18677	-0.059124	-0.0042081	-0.072103	0.0019888	-0.36503	0.0020399	0.0053761	0.0011758	0.021603	0.0014592	0.012036	0.016286	-0.0026722	0.0063871	0.0062981	0.0070826	0.021637	-0.095674	0.017636	0.0037461	0.059708	0.0087528	0.020417	-0.092742	0.016146	-0.64252	0.012311	-0.033618	0	0	0.0041596	-0.99681	0.0045519	0.27771	0.0097276	0.0091097	0.013911	-0.0018425	0.00083195	0.001071	-0.0028489	0.0013868	-0.0019564	-0.00011569	0.017495	0.00069327	0.023426	0.0029133	0.019783	0.026554	-0.10884	-0.19756	0.0075	-0.0051013	0.060145	-0.47786	0.0041704	0.015308	-0.00080558	-0.38072	0.00069327	-0.016314	-0.050285	0.0066653	0.02915	0	0.0048741	0.16601	0.00597	-0.0038779	0.0090301	-0.018928	-0.0025333	0.0032572	0.0072217	-0.040388	0.025759	0.0018915	-0.0031859	-0.12082	
Deletion Peak  6 - CN values	3q13.31 	chr3:89150943-138203274(probes 310922:336552)    	chr3:116426639-116440933(probes 324037:324044)  	chr3:116034713-117588027(probes 323746:324952)  	0.10804	     0.1081		Actual Copy Change Given	-0.0033782	0.020203	-0.002579	-0.0050617	0.015587	-0.0031859	0	0	0.00055459	0	0.0041632	-0.021276	0.0031536	-0.0031951	-0.023753	-0.2	0.010948	-0.020348	0.0014522	-0.0030475	-0.00068403	-0.0026404	0	0.049737	-0.004594	-0.74461	-0.0068159	0.0014714	0.018943	-0.78215	0	-0.011889	-0.039258	0.0041632	-0.00045913	0.0043021	-0.0044954	0.0033299	-0.011668	0	0	-0.016841	-0.0042929	-0.0053191	0.0071648	0	0.00097064	0	-0.006424	-0.0030994	0.0050817	0.0026531	0.020308	0.10205	0.020605	-0.5853	0.0034687	-0.0064509	0.016985	0.0092846	-0.023001	-0.03248	0.0052647	-0.017529	-0.053934	-0.38601	-0.072754	-0.011202	-0.02151	0.0020399	0.0017121	0.75626	-0.37123	0.0014592	0.011555	-0.047339	-0.0026722	-0.0073093	0.0035432	0.016168	0.013151	-0.10538	0.017636	-0.00032024	-0.068321	0.0035352	0.019771	-0.4034	0.016146	-0.081738	0.014051	0.01522	0	-0.0073339	-0.008348	-0.083067	0.0045519	0.26878	-0.33756	0.0091097	-0.020225	-0.0018425	0.00083195	0.0027918	-0.0028489	0.0013868	-0.0056366	-0.26871	-0.0020784	0.00069327	0.023426	0.0015178	-0.012774	0.064368	-0.10884	-0.01404	-0.073571	-0.0051013	0.019783	-0.0026322	0.0033459	-0.0049485	-0.00080558	0.015474	0.00069327	-0.016314	-0.050285	-0.0018567	-0.54535	0	-0.0065621	-0.86732	-0.0057695	-0.0038779	0.0090301	-0.007759	-0.0025333	0	-0.32379	-0.040388	0.0014636	0.0018915	-0.0031859	-0.23777	
Deletion Peak  7 - CN values	3q29    	chr3:194502405-198022430(probes 366258:366989)  	chr3:196365920-198022430(probes 366853:366989)  	chr3:196970126-198022430(probes 366855:366989)  	0.14672	    0.14114		Actual Copy Change Given	0.0029133	0.020203	0.04741	-0.0050617	0.015587	-0.0031859	0	-0.0025093	0.79011	0	0.0041632	-0.0016629	0.00083195	-0.30189	-0.023753	-0.20781	0.010948	-0.0092666	0.0014522	0.010285	-0.00068403	-0.0026404	0	0.0079269	-0.004594	-0.73547	-0.0087146	0.0014714	0.018943	-0.3755	0	-0.011889	-0.039258	0.0041632	0.017124	0.0043021	-0.0044954	0.0033299	0.016006	0	-0.0012473	-0.016841	-0.0042929	-0.0053191	0.025841	0	0.00097064	-0.00025036	-0.006424	-0.77456	0.0050817	0.0076962	0.019652	0.097169	0.020605	0.014888	0.0034687	-0.0064509	-0.14881	0.0092846	-0.023001	-0.03248	0.0039627	-0.049289	-0.048666	-0.37441	1.0547	-0.011202	-0.79017	0.0020399	0.0017121	0.7877	-0.35453	0.0014592	0.0065617	-0.047339	0.0016642	-0.0073093	0.0035432	-0.42462	0.013151	-0.10538	0.019476	-0.01301	-0.068321	0.014609	0.019771	-0.25914	0.016146	0.87647	0.014051	0.017544	0	-0.010908	-0.008348	0.01797	0.0010365	0.26745	-0.38156	0.0091097	-0.11482	-0.0018425	0.00083195	0.0014401	-0.42036	0.0013868	-0.012162	0.4647	0.0013868	0.00069327	0.017857	-0.0055375	-0.012774	-0.45394	-0.15148	-0.01404	-0.065313	-0.0051013	0.016286	0.0040243	0.0020727	-0.0049485	-0.00080558	0.0078524	0.00069327	0.0092198	-0.050285	-0.0018567	0.00024338	-0.82928	-0.0065621	0.16357	-0.0047079	-0.0098819	-0.039801	-0.007759	-0.0025333	0	-0.0092666	-0.077078	0.019424	-0.00067345	-0.0031859	-0.23777	
Deletion Peak  8 - CN values	4q35.1  	chr4:169416144-191154276(probes 459848:469783)  	chr4:183534656-184213557(probes 467727:467728)  	chr4:148522361-191154276(probes 448343:469783)  	2.4912e-06	 2.4912e-06		Actual Copy Change Given	-0.0056757	-0.014839	-0.016841	-0.88724	0.014749	-0.089982	-0.010784	-0.017391	0.0068044	-0.0045695	0.00458	-0.010168	0.0066653	-0.07902	-0.040209	-1.2625	-0.1006	-0.025962	-0.0017591	-0.0076794	-0.079209	-0.00097017	-0.32113	-0.67119	-0.0049481	-1.0397	-0.020203	-0.44275	-0.018628	-0.41827	-0.011749	-0.024064	0.00061705	-0.007468	-0.075421	0.017264	-0.0062286	-0.37089	-0.015329	-0.3068	0.0098669	-0.0077482	-0.0014334	-0.21688	-0.0024644	-0.73546	-0.0084385	-0.037522	-0.014778	-0.0077482	-0.0021324	-0.020004	-0.26725	-0.22405	-0.12478	-0.0042015	-0.0053992	-0.0060301	-0.73345	0.0052498	-0.04272	-0.039491	-0.89315	0.014596	0.039041	-0.38054	-0.51064	-0.023519	-0.77676	-0.016979	0.0062961	0.0031577	-0.22582	-0.006401	-0.71837	-0.090028	-0.016017	0.0024969	-0.6401	0.0043021	-0.61748	-0.043109	-0.82977	-0.85734	-0.093226	-0.015927	-0.56197	-0.10066	-0.099341	-0.1338	-0.32426	-0.16256	-0.35195	-0.026577	-0.038769	-0.77259	-0.72482	-0.44405	-0.31746	-0.5504	-0.019863	-0.0066842	0.0038854	-0.014899	-0.015054	0.0016642	-0.01106	-0.26544	-0.21347	-0.00055444	0.024689	-0.18131	-0.18702	-0.019019	-0.11916	-0.34785	0.0024969	-0.0022345	-0.70154	-0.007472	-0.01961	-0.23276	-0.016063	-0.079405	-0.0092666	-0.055303	-0.013315	-0.00082557	0.010614	-0.059272	-0.01971	0.0065362	-0.0068029	-0.014641	-0.040888	-0.014363	-0.013244	-0.29124	-0.32064	0.010203	-0.81173	-0.15155	-0.022058	-0.93936	
Deletion Peak  9 - CN values	6p24.1  	chr6:1-15538684(probes 570337:580589)              	chr6:13279389-13331096(probes 579174:579218)      	chr6:12703053-13591685(probes 578719:579429)      	0.07614	    0.07614		Actual Copy Change Given	-0.0011087	-0.0037395	0.69585	-0.042748	0.0069435	0	-0.0027516	0.013772	-0.012438	0.018021	-0.46067	0.035819	-0.61307	-0.011449	0.38816	-0.15298	-0.034336	0.034113	0	0	-0.010242	-0.0031859	0.0013868	0.0032641	-0.00093375	-0.15904	-0.0036011	0.01447	-0.013953	0.031999	0.0013844	0.0029828	0.018523	-0.0015665	-0.016979	-0.051316	0.016705	0.0026728	0.0038139	-0.014366	0.0027745	0.00055459	0.0090312	-0.0058761	0.0066948	0.0005733	-0.014571	0.02519	0.032422	-0.0051227	0	0.02096	0.0059797	-0.15119	-0.0063207	-0.60004	0.0087528	0.0010569	0.0076392	-0.00044087	-0.73344	0.19539	-0.0090615	0.22083	0.014275	0.042394	0.017321	0.0069907	0.052156	-0.0012	0.0094284	-0.020034	0.083487	-0.014848	0.039619	0.01799	0.0011093	-0.0052966	-0.013677	0.0097276	-0.0087691	0.0035666	0.004511	0.0066653	0.0015667	-0.00659	-0.0019012	0.022444	-0.0060597	-0.13368	0.0094491	0	0.0044411	0.0041632	0.01419	-0.0060904	0.007255	-0.0015243	-0.39619	0.0045377	-0.0022168	0.00051344	-0.010791	-0.52922	-0.0056757	-0.011328	0.00094224	-0.44295	0.026935	0.0030595	-0.0094487	-0.0040162	0.008685	-0.10308	-0.096767	0.00020573	-0.033132	0.0021629	-0.0057665	0.0029133	0.0018408	-0.00013862	0	0.001708	-0.002472	-0.0082516	0.0067534	-0.00055444	0.00065937	-0.85878	0.0022355	0.08897	0.0026357	0.008892	-0.045916	-0.0034077	9.9014e-05	0.0075663	0.010182	-0.0032049	0.0059829	-0.1853	0.015866	-0.94463	
Deletion Peak 10 - CN values	6q12    	chr6:57206295-82464215(probes 604256:615335)      	chr6:64422985-66417935(probes 605252:606248)      	chr6:65423479-65424005(probes 605751:605752)      	0.13046	     0.1275		Actual Copy Change Given	-0.0011087	-0.0059195	-0.00055444	0.028122	-0.66467	0	-0.0015243	0.013772	0.0041632	0.010982	-0.50865	0.019783	0.013073	0.005595	0.38816	-0.19339	0.01575	0.0026701	0	0	-0.005269	-0.0031859	0.0013868	0.0032641	-0.00093375	0.17248	-0.0036011	0.01447	-0.013953	0.031999	0.044007	0.0029828	0.018523	-0.0015665	-0.016979	-0.65015	-0.0024165	0.0026728	-0.0037395	-0.014366	0.0030522	0.00055459	-0.0005111	-0.0058761	-0.025318	0.0005733	-0.013057	-0.0075048	-0.0073108	-0.0051227	0	-0.011984	0.0059797	-0.16185	-0.33453	-0.0031859	-0.012302	-0.0005436	-0.71711	-0.00044087	-0.031479	0.19539	0.014168	0.22083	0.014275	0.058522	0.034858	-0.0056575	0.052156	-0.0012	-0.00022939	-0.039543	-0.076617	0.018407	0.039619	0.01799	0.0011093	-0.0052966	0.015028	-0.48418	0.054366	0.0023797	0.023031	0.0066653	0.0015667	-0.00659	-0.0019012	0.022444	0.0051359	-0.064911	-0.045547	0	0.0044411	0.0041632	-0.010454	-0.0060904	0.007255	-0.0015243	0.036088	0.0045377	-0.0022168	0.00051344	0.0045065	0.0022366	-0.8079	-0.011328	-0.0089103	0.05198	-0.0061743	0.004719	-0.00082461	0.00458	0.008685	0.012516	-0.0041546	-0.0065204	-0.033132	0.0042904	0.015028	0.0029133	0.0018408	-0.00013862	0	0.001708	-0.002472	-0.0082516	-0.00038009	-0.00055444	0.00065937	-0.0011087	0	-0.6979	0.0026357	0.008892	-0.017529	-0.0034077	9.9014e-05	0.0075663	0.010182	0.0026357	0.0059829	-0.012483	-0.010255	0.059223	
Deletion Peak 11 - CN values	9p21.3  	chr9:21991753-22448737(probes 843324:843626)      	chr9:21991924-22125346(probes 843325:843434)      	chr9:20036747-29399549(probes 841967:847638)      	6.9653e-37	 6.9653e-37		Actual Copy Change Given	-0.0021869	0.0053582	-0.0070085	-1.5	-0.0019399	-0.004918	-0.49734	0.002988	-1.5	-0.1706	-1.1827	-0.016441	-1.2494	-0.0017914	0.34242	-0.24849	-0.0057906	-0.004789	-0.00041585	-0.24044	-0.039041	-8.3116e-05	0.01165	-0.72452	-0.0027343	-0.82254	0.016565	-0.41769	-0.0083005	-0.79001	-0.7338	0.0048948	0.0065262	-0.0045695	-0.00015695	-1.3433	-0.0041546	-0.36691	-1.5	0.0095883	-0.94627	-0.62455	0.0097276	0.071966	-0.0066138	-0.010543	-0.0062708	-0.025684	-0.01123	-0.54915	0.0027204	-0.18167	-0.4045	-0.0020272	-0.058878	-1.1636	-0.59341	0.0098143	-0.73134	-1.5	-0.6941	0.035916	0.002842	-0.36328	-1.3907	-0.28833	0.18545	0.01997	1.0529	0.0019877	-1.0487	-0.02661	-0.33964	-0.2097	-0.34584	-0.72163	0.0044411	-1.2873	0.008892	-0.69468	-0.02603	-0.014164	-0.61568	-0.82547	-0.33783	-0.56169	-0.033416	0.14132	-0.0092666	-1.171	-0.06048	-0.1508	0.01419	-0.0044058	0.0070048	0.014749	-0.69633	-0.016567	-0.71248	-0.51161	-1.3349	0.0056506	-0.0015471	-0.11257	0.00033106	-0.75633	0.0058313	-0.47995	0.00097064	0.0058311	-0.0069195	-9.8131e-05	0.035383	-0.48123	-0.044869	-0.0087782	0.54471	-0.76718	-0.80368	-0.014641	-0.025305	0.0024969	0.00030331	0.0025708	-0.019452	-0.028775	-0.0083511	0.00057466	-0.0026513	-0.022589	0.013369	-0.86467	0.0058667	0.017214	-0.017666	-0.0053443	0.00037631	-0.01942	-0.033132	-0.27619	0.0080799	-0.026167	0.019223	-0.97594	
Deletion Peak 12 - CN values	10q26.13	chr10:111624142-135534747(probes 963343:978784)	chr10:118301522-135534747(probes 967971:978784)	chr10:111744671-135534747(probes 963424:978784)	0.0010176	  0.0010176		Actual Copy Change Given	-0.00082756	-0.55934	-0.0012363	-0.072331	-0.030293	0.014749	-0.083394	0.010703	-0.79986	-0.07067	-0.58704	-0.8031	-0.6009	-0.016937	-0.46974	-0.014778	-0.053379	0.019503	0	0.0042268	-0.050622	0.005464	-0.082402	-0.037371	-0.011098	-0.80257	0.0114	-0.41256	0	-0.01279	-0.49071	0.010355	0	0.0059068	0.019605	-0.65211	0.013074	-0.0045695	-0.78429	-0.10383	-0.47934	-0.035216	0.0079768	0.056627	-0.74217	0.006545	-0.020053	0.028167	0.018523	0	-0.27569	0.0089491	-0.20618	-0.012888	-0.27196	-0.58244	-0.59776	-5.2431e-05	-0.73661	-0.88474	-0.72313	-0.10729	-0.0050555	-0.037008	-0.63443	-0.75972	-0.25752	0.014377	-0.68399	-0.0055375	-0.5106	-0.87379	-0.12739	-0.047391	-0.024227	-0.0096806	-0.6303	-0.61222	-0.0049293	-0.14044	0.0062481	0.0053728	-0.07214	0	-0.0021772	0.00027728	-0.035943	0.009643	-0.023812	-0.59585	0.00027728	0.012295	-0.31704	0.0068044	0.0086135	0.004719	-0.0068313	-0.030796	-0.011261	-0.006289	-0.0027707	-0.34723	-0.0008316	-0.0064618	-0.0014646	-0.76361	0.0026357	0.055396	0.0080567	-0.25998	-0.00013862	-0.0082071	0.017544	-0.0026522	-0.026712	-0.73622	-0.0094113	0.01068	-0.29756	-0.034485	0.00027684	0	0.0078777	-0.10362	-0.75633	-0.7038	0.0011972	0.00027728	-0.0035709	-0.0033243	0.0094653	-0.84328	0.0066653	0.00597	0.010424	-0.00077649	0.002596	-0.0043653	-0.040971	-0.007472	-0.006557	0	0.013632	-0.93534	
Deletion Peak 13 - CN values	11p15.5 	chr11:1-71303995(probes 978785:1016367)            	chr11:1-1920254(probes 978785:979179)               	chr11:1-5948237(probes 978785:981342)               	0.020932	   0.022809		Actual Copy Change Given	-0.01498	-0.014001	0.0047439	-0.83046	-0.0036011	0.0063871	-0.0060904	0.017684	-0.0015243	0.757	-0.0040162	0	-0.0025309	-0.11089	-0.43105	-0.76492	-0.010455	0.0096337	0.0065262	0.012097	-0.016757	-0.031698	0.012376	-0.87387	0.010879	-0.80446	0.0043021	0.018243	0.010424	0.017366	-0.28001	0.088475	-0.70651	0.0015296	0.19999	0.0027745	0.0075438	-0.37178	0.0048579	-0.62489	-0.0038779	-0.0096806	0.015447	-0.0066667	0.016081	0.0046748	0.1936	0.67692	0.020063	0.013492	-0.6425	0.66538	-0.0075285	0.099579	0.016432	0.0014794	0.0068044	-0.00026729	-0.00027724	-0.0033928	-0.025996	-0.72996	-0.0096135	-0.0024938	-0.50335	-0.75654	-0.1768	0.010193	-0.80837	0.10833	0.0058789	-0.011897	-0.20576	-0.20621	0.63171	-0.020568	0.010006	0.010006	-0.0098121	-0.19802	-0.034408	0.0044942	-0.014529	0.0019418	-0.087712	-0.023302	-0.38347	-0.73622	-0.019723	-0.71039	-0.007541	-0.10361	0.018943	0.012376	0.021744	0.0079923	-0.0012753	0.23055	-0.022125	-0.00463	-0.65021	0.001394	-0.36333	-0.0050598	0.0038854	-0.025893	0.36931	0.034088	0.017124	0.0038854	0.032845	-0.0069139	0.02806	-0.67896	0.031971	-0.011356	-0.2125	-0.11524	0.0066653	-0.55458	-0.0028395	0.026233	0.080051	-0.019104	0.0072217	-0.082713	-0.59853	-0.0050619	-0.12528	0.0065262	0.023863	0.004497	-0.34412	0.0070826	0.010285	0.0011022	0.0057674	-0.0097062	-0.0047946	-0.020572	-0.021649	-0.6827	0.012516	-0.93045	
Deletion Peak 14 - CN values	11q14.1 	chr11:79148041-87846595(probes 1020614:1026010)  	chr11:82436793-82446910(probes 1022799:1022800)  	chr11:82233046-82485301(probes 1022753:1022816)  	0.18231	    0.18746		Actual Copy Change Given	0.00041593	-0.012162	0.0047439	0.048466	0.0036076	0.0063871	0.0019418	0.0012411	-0.032587	0.757	-0.0039036	0	-0.0025309	0.0047394	-0.026577	0.18556	0.019386	0.018612	0.00056955	0.012097	-0.054505	-0.0013858	0.0075537	0.031436	0.0094789	0.28888	0.0043021	0.011042	0.0070826	0.019783	-0.26107	0.0052055	0.03863	0.05153	0.11737	0.0027745	-0.0039206	0.020203	0.077286	0.1095	-0.0038779	-0.0096806	0.64471	0.50221	0	-0.77743	0.18321	0.67692	0.013544	0.025958	-0.013869	0.11776	0.039347	0.10618	0.01709	0.0014794	0	0.0018893	0	-0.0029341	-0.68605	0.42818	-0.0096135	0.00597	-0.50705	0.023652	-0.0041159	0.010193	-0.37184	0.0058083	0.0029903	-0.0095757	-0.035277	-0.12158	0.65143	0.018663	0.010006	0.0026792	0	-0.0067813	-0.0029091	-0.0054214	0.0054562	0.0019418	0.75395	0	0.088246	0.052383	0.049824	0.47426	0.0090312	0.079591	0.0070034	-0.005261	0.013353	0.0079923	-0.76896	0.24871	-0.32971	-0.0052644	0.017684	0	0.0057168	0.043883	0.00033173	0.0017586	0.37218	0.034088	0.035242	0.0032639	0.0091424	0.0052749	0.03623	0.024689	0.010035	0	0.13095	0.0073043	0.0054767	-0.0032484	0	0.016425	0.080051	0.050042	0.003679	-0.0022986	0.59721	0.014749	-0.52831	0.079131	0.0067643	-0.0010313	0.35463	0.0095492	0.0095883	0.0013032	0.0082953	-0.0010427	0.062584	0.82248	0.0021241	0	0.012516	0.022865	
Deletion Peak 15 - CN values	14q24.3 	chr14:58901446-80681882(probes 1207586:1220961)  	chr14:75889234-75942922(probes 1217660:1217709)  	chr14:69539789-79190913(probes 1213835:1219938)  	0.01465	   0.014571		Actual Copy Change Given	-0.72923	-0.56147	-0.69829	-0.033779	-0.65379	0.0114	0.001803	0.015866	0.00069327	0.036512	0.0013868	0.010842	0.0020805	0.0024471	0.30969	0.0091447	0.0011863	-0.84074	-0.00055444	-0.0026217	0.0050425	-0.0013858	0.028987	-0.0075646	0.00045238	0.08904	0.013772	-0.41462	0.0076392	0.021985	-0.76235	0.0026226	-0.31206	-0.28465	0.022865	-0.65426	0.019783	-0.18541	-0.6368	0.0020805	-0.0028699	-0.45768	0.017824	-0.055903	-0.82511	0.011977	-0.00097017	0.017855	0.0070054	-0.035448	-0.608	-0.18315	-0.14566	0.083054	-0.055858	0.0059444	-0.59136	0.0021957	0.0054979	0.0077257	0.071265	-0.72767	0.0029809	-0.71024	-0.76153	-0.32836	0.018965	0.024288	-0.37454	-0.0012473	-0.51219	-0.0043261	0.021133	-0.0013586	0.0024969	-0.55196	-0.62941	0.013362	0.0066357	-0.69839	0.010703	0.0069024	0.0036076	-0.82708	-0.019107	-0.0060904	-0.0034029	0.018103	-0.076545	-0.63614	-0.72411	-0.25648	0.017544	0.016289	-0.62846	-0.19224	-0.70494	0.0043021	-0.37347	-0.0040288	0.0063871	0.0035664	-0.02327	0.0085391	0.0011093	0.0087982	0.015447	0.037721	0.012237	-0.26143	0.032197	0.0026716	0.023286	-0.016073	0.020524	0.0040915	0.0036076	-0.0040725	0.003798	-0.014761	0.0025054	0.0087528	0.016452	0.0044675	-0.0027707	0.0058801	0.0056973	0.0026618	-0.54513	0.001803	0.0163	-0.86449	0.0037465	0.0093098	-0.024798	-0.013754	0.0058575	-0.029656	-0.15304	0.0080567	-0.024809	0.0051359	0.018243	0	
Deletion Peak 16 - CN values	15q21.1 	chr15:1-65284370(probes 1236202:1259582)         	chr15:48411822-48638342(probes 1248644:1248754)  	chr15:48384908-48901419(probes 1248632:1248937)  	0.18592	    0.18746		Actual Copy Change Given	0.0049969	-0.026805	0.0077783	0.057859	-0.013402	0.028622	0.0044411	0.031859	0.0068044	-0.044009	-0.57486	0.017742	0.0038854	-0.0017594	-0.046448	-0.053476	0.0015489	0.05153	0	0.017824	-0.0057686	0	-0.28204	-0.01445	-0.0055012	-0.76292	0.031295	-0.39319	-0.011473	0.029595	-0.24727	0.016308	-0.24788	-0.011343	-0.019177	0.015866	0.037217	0	0.11228	0.0019418	0.00027728	0.013256	0.024689	0.0069435	-0.0027456	0.026111	-0.0024527	-0.82385	0.035279	0.0015009	-0.097209	0.011875	0.067035	-0.31716	0.0022018	0.013911	0.014609	0.0066226	-0.0034627	-0.0034877	0.011696	0.044117	0.0042308	-0.040209	0.0043556	-0.37959	0.00037618	0.027967	-0.40782	0.0023581	-0.006581	0.016392	0.13066	-0.02435	-0.011887	0.053237	0.019783	0.019904	0.006109	0.0037814	-0.053341	0.0045643	-0.032178	0.0049969	-0.0051227	0.50759	0	-0.023292	-0.0042929	0.34573	0.001803	0.013772	-0.62054	0.0114	0.030732	-0.0066432	0.026064	-0.056173	-0.0019399	0.00077137	0.012516	-0.33644	-0.0078863	0.0052921	0.010703	-0.75521	-0.36011	-0.12938	0.027778	0.0068044	0.016985	0.0012481	-0.79936	0.00097064	0.00097064	-0.0007356	-0.0040974	0.0054963	0.0065262	0.0019418	-0.021777	-0.42347	0.0059961	-0.0085031	-0.0063477	-0.021324	0.011488	0.0030127	-0.039019	0.0068169	0.011695	-0.34016	0.010424	0.032281	-0.26172	0.0063656	-0.036304	0.0099052	-0.31026	0.012097	-0.011757	-0.056577	-0.029547	-0.026851	
Deletion Peak 17 - CN values	17q25.3 	chr17:80379333-81195210(probes 1358269:1358571)  	chr17:80692067-81195210(probes 1358453:1358571)  	chr17:80703381-80714326(probes 1358456:1358457)  	0.19934	     0.2067		Actual Copy Change Given	-0.015879	0.017972	0.0282	0.00030585	-0.028765	0.054518	0.014888	0.062937	-0.045093	0.065942	0.00097064	-0.013815	-0.014641	0.011303	0.28659	0.078078	-0.79977	0.086279	-0.0008316	0.055943	0.0082416	0.0091705	0.057368	-0.67685	0.0029498	-0.081684	0.047537	0.066298	0.0091705	0	0.27553	0.052312	-0.13471	-0.033269	0.08302	-0.015879	0.094782	-0.0012473	0.030464	0.010083	-0.015329	0.059109	0.045971	0.02525	0.048797	0.10105	0.0083351	0.087789	0.12241	0.0282	0.035186	0.07303	0.38086	-0.13962	0.0094955	0.0029133	0.016845	0.018529	-0.020138	-0.041727	0.043033	0.027326	0.0071503	-0.012851	0.082433	0.0071679	-0.011297	0.064702	0.2214	0.011958	0.0062961	0.81801	0.018523	0.040716	0.0062481	-0.11169	-0.014503	-0.017759	0.038489	0.019643	-0.021352	0.013591	-0.044009	0.013911	0.76291	0.0019418	0.043145	-0.021784	0.0012481	0.30473	0.015727	0.0063871	0.053806	0.082332	0.046898	0.012491	0.039874	0.21806	-0.016109	-0.006289	0.010146	0.0023169	0.037641	0.036529	0.045282	-0.090376	0.40101	0.0034917	0.10877	-0.0099565	-0.0039794	0.015308	0.087419	-0.033132	0.029277	0.00034438	0.0026357	-0.0029654	-0.0060904	0.01003	-0.27618	0.11272	0.076881	0.0054879	-0.72031	0.010195	0.016793	0.0037465	-0.00058832	0.01572	0.085303	0.0071386	0.023566	0.057796	0.027638	0.016481	0.054762	0.027306	0.045991	-0.010508	-0.026218	-0.0076101	0.068378	-1.0079	
Deletion Peak 18 - CN values	19q13.41	chr19:42881099-59128983(probes 1418723:1425219)  	chr19:52838750-53041106(probes 1422751:1422797)  	chr19:42685298-59128983(probes 1418673:1425219)  	7.6233e-09	   0.058439		Actual Copy Change Given	0.0052749	0.021043	-0.68988	-0.26528	-0.65752	-0.71479	0.024127	-0.77269	0.61734	-0.77215	0.096234	0.72708	-0.047801	0.012279	-0.033677	0.091445	-0.01145	-1.5	0.0045705	-0.62699	0.020389	-0.62503	-0.7311	-0.37523	0.0011458	-0.40026	-0.66835	-0.82489	-0.036401	-0.028901	-0.10788	-0.68351	-0.72137	0.0068044	-0.83049	-0.0081624	-0.55957	-0.42353	0.031859	-0.076586	0.41898	-0.11116	-0.67242	0.030873	-0.79468	-0.76508	0.00013863	-0.78035	-0.8283	0.0026357	-0.60491	-0.66262	-0.44199	-0.73573	-0.016933	-0.011335	0.0024969	0.029604	-0.051806	0.71499	0.022882	-0.85502	-0.84006	-0.71595	0.048859	-0.29631	-0.053934	-0.74383	-0.10841	-0.014503	-0.0063191	-0.0077814	-0.16539	-0.073509	-0.78623	-0.060748	0.017963	-0.015196	-0.78942	-0.67976	-0.042924	-0.60755	-0.089831	-0.79611	-0.012438	-0.82562	-0.68734	-0.77048	-0.017666	-0.16764	-0.72853	-0.022469	-0.6846	-0.75158	-0.57802	-0.74072	-0.80193	-0.60197	-0.057767	-0.54718	-0.63887	0.00065211	-0.0083005	-0.3357	0.020063	0.60503	-0.55717	-0.50896	-0.80384	0.10839	-0.026498	-0.31961	-0.79495	-0.033558	-0.77346	0.010074	-0.00037579	-0.77749	0.0057094	0.013911	0.00056179	-0.75831	-0.48951	-0.056505	-0.024661	0.0075493	-0.57213	-0.08974	0.0042682	-0.027398	-0.6233	-0.83689	-0.29898	-0.70334	0.00597	-0.56389	-0.47335	-0.5022	-0.052126	0.00038788	-0.84974	-0.017453	-0.56525	-0.070402	
Deletion Peak 19 - CN values	19q13.43	chr19:54037464-59128983(probes 1423098:1425219)  	chr19:57167024-57185745(probes 1424323:1424326)  	chr19:42685298-59128983(probes 1418673:1425219)  	3.3971e-10	 1.5129e-08		Actual Copy Change Given	0.0052749	0.021043	-0.69206	-0.26528	-0.65752	-0.71479	0.024127	-0.77269	0.61734	-0.79118	0.096234	0.72708	-0.021921	-0.57927	-0.033677	-0.75599	-0.01145	-0.80792	0.0045705	-0.62699	-0.39949	-0.62503	-0.7311	-0.37523	0.0011458	-0.40026	-0.68067	-0.82954	-0.036401	-0.028901	-0.10788	-0.68351	-0.72137	0.0068044	-0.84299	-0.0081624	-0.55957	-0.42353	0.031859	-0.076586	0.41898	-0.11116	-0.67242	0.030873	-0.81702	-0.76508	0.00013863	-0.80586	-0.84627	0.0026357	-0.60491	-0.66262	-0.44199	-0.73573	-0.016933	-0.011335	0.0024969	0.029604	-0.035176	0.71499	0.032281	-0.84517	-0.86653	-0.71595	0.048859	-0.55892	-0.053934	-0.74487	-0.44113	-0.014503	-0.53973	-0.0077814	-0.16539	-0.12632	-0.78623	-0.060748	0.017963	-0.015196	-0.8065	-0.68995	-0.042924	-0.60755	-0.089831	-0.79611	-0.012438	-0.82562	-0.68734	-0.77048	-0.017666	-0.16764	-0.78135	-0.022469	-0.69015	-0.78069	-0.57802	-0.74072	-0.80193	-0.61969	-0.057767	-0.54718	-0.63887	0.00065211	-0.0083005	-0.3357	0.020063	0.60503	-0.55717	-0.54571	-0.80384	0.10839	-0.026498	-0.32267	-0.79495	-0.083067	-0.77346	0.010074	-0.00037579	-0.77417	0.0057094	0.013911	0.00056179	-0.75831	-0.48951	-0.056505	-0.72729	0.0075493	-0.57213	-0.08974	0.0042682	-0.027398	-0.6233	-0.83689	-0.29898	-0.70334	-0.83171	-0.56389	-0.47335	-0.49894	-0.052126	0.00038788	-0.84974	-0.035116	-0.56525	-0.070402	
Deletion Peak 20 - CN values	22q13.31	chr22:39424515-51304566(probes 1493837:1500050)  	chr22:44566797-51304566(probes 1496588:1500050)  	chr22:42128462-51304566(probes 1495163:1500050)  	0.076257	    0.07614		Actual Copy Change Given	0.007735	0.030169	0.037217	-0.83926	-0.028765	0.063509	-0.60883	0.066658	-0.042245	0.038684	-0.57506	-0.72788	-0.011887	-0.082292	0.31241	0.040326	-0.012277	0.087465	-0.0023553	0.054091	0.0061547	-0.63699	0.058081	-0.049642	-0.020102	-0.81113	0.064225	0.094939	-0.049289	-0.048351	0.064797	0.071479	-0.039122	0.0037465	0.076854	-0.67489	0.073258	0.0070826	-0.75874	-0.30897	-0.022195	0.0020805	0.057226	0.022164	0.021493	0.06167	0.0067075	0.11708	0.089561	0.025671	8.456e-05	0.17564	-0.11899	0.14593	-0.0053531	-0.5899	0.018663	-0.79253	-0.028319	-0.044169	0.028077	-0.034661	0.010149	-0.089699	-0.0091825	-0.76015	-0.10009	0.082474	-0.10184	0.01447	0.012982	0.030698	0	0.0042678	0.0083351	-0.028824	-0.61896	-0.015468	0.031436	-0.46539	-0.034768	0.034354	-0.062495	0.0069435	-0.041159	-0.13956	-0.050652	-0.051856	-0.35453	-0.70961	0.0075	-0.0024938	0.071391	0.069525	0.064654	-0.23741	0.03846	0.21379	-0.060484	-0.012967	0.01447	-0.0035038	-0.010922	0.063098	0.021323	-0.020214	0.044999	-0.026673	0.075703	-0.16307	-0.015054	0.013911	0.11345	0.0079175	0.046842	0.020831	-0.084793	-0.023484	-0.010094	-0.011822	0.0013068	0.07988	0.049709	-0.045021	-0.0082924	0.016615	0.031244	0.00597	-0.013573	0.022444	0.060239	0.0083911	0.026921	0.070099	0.05581	0.017962	0.063755	0.032489	-0.010232	-0.092793	-0.032229	-0.033954	0.07096	-0.074114	
