Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-BL-A0C8-01A-11D-A10T-01	TCGA-BL-A13I-01A-11D-A13V-01	TCGA-BL-A13J-01A-11D-A10T-01	TCGA-BL-A3JM-01A-12D-A219-01	TCGA-BT-A0S7-01A-11D-A10T-01	TCGA-BT-A0YX-01A-11D-A10T-01	TCGA-BT-A20J-01A-11D-A14V-01	TCGA-BT-A20N-01A-11D-A14V-01	TCGA-BT-A20O-01A-21D-A14V-01	TCGA-BT-A20P-01A-11D-A14V-01	TCGA-BT-A20Q-01A-11D-A14V-01	TCGA-BT-A20R-01A-12D-A16M-01	TCGA-BT-A20T-01A-11D-A14V-01	TCGA-BT-A20U-01A-11D-A14V-01	TCGA-BT-A20V-01A-11D-A14V-01	TCGA-BT-A20W-01A-21D-A14V-01	TCGA-BT-A20X-01A-11D-A16M-01	TCGA-BT-A2LA-01A-11D-A18E-01	TCGA-BT-A2LB-01A-11D-A18E-01	TCGA-BT-A2LD-01A-12D-A20B-01	TCGA-C4-A0EZ-01A-21D-A10T-01	TCGA-C4-A0F0-01A-12D-A10T-01	TCGA-C4-A0F6-01A-11D-A10T-01	TCGA-CF-A1HR-01A-11D-A13V-01	TCGA-CF-A1HS-01A-11D-A13V-01	TCGA-CF-A27C-01A-11D-A16M-01	TCGA-CF-A3MF-01A-12D-A219-01	TCGA-CF-A3MG-01A-11D-A20B-01	TCGA-CF-A3MH-01A-11D-A20B-01	TCGA-CF-A3MI-01A-11D-A20B-01	TCGA-CU-A0YN-01A-21D-A10T-01	TCGA-CU-A0YO-01A-11D-A10T-01	TCGA-CU-A0YR-01A-12D-A10T-01	TCGA-CU-A3KJ-01A-11D-A219-01	TCGA-DK-A1A3-01A-11D-A13V-01	TCGA-DK-A1A5-01A-11D-A13V-01	TCGA-DK-A1A6-01A-11D-A13V-01	TCGA-DK-A1A7-01A-11D-A13V-01	TCGA-DK-A1AA-01A-11D-A13V-01	TCGA-DK-A1AB-01A-11D-A13V-01	TCGA-DK-A1AC-01A-11D-A13V-01	TCGA-DK-A1AD-01A-11D-A13V-01	TCGA-DK-A1AE-01A-11D-A13V-01	TCGA-DK-A1AF-01A-11D-A13V-01	TCGA-DK-A1AG-01A-11D-A13V-01	TCGA-DK-A2HX-01A-12D-A18E-01	TCGA-DK-A2I1-01A-11D-A17S-01	TCGA-DK-A2I2-01A-11D-A17S-01	TCGA-DK-A2I4-01A-11D-A219-01	TCGA-DK-A2I6-01A-12D-A18E-01	TCGA-DK-A3IK-01A-32D-A219-01	TCGA-DK-A3IL-01A-11D-A20B-01	TCGA-DK-A3IM-01A-11D-A20B-01	TCGA-DK-A3IN-01A-11D-A20B-01	TCGA-DK-A3IQ-01A-31D-A20B-01	TCGA-DK-A3IS-01A-21D-A219-01	TCGA-DK-A3IT-01A-31D-A20B-01	TCGA-DK-A3IU-01A-11D-A20B-01	TCGA-DK-A3IV-01A-22D-A219-01	TCGA-E5-A2PC-01A-11D-A201-01	TCGA-FD-A3B3-01A-12D-A201-01	TCGA-FD-A3B4-01A-12D-A201-01	TCGA-FD-A3B5-01A-11D-A20B-01	TCGA-FD-A3B6-01A-21D-A20B-01	TCGA-FD-A3B7-01A-31D-A20B-01	TCGA-FD-A3B8-01A-31D-A20B-01	TCGA-FD-A3N5-01A-11D-A219-01	TCGA-FD-A3N6-01A-11D-A219-01	TCGA-FD-A3NA-01A-11D-A219-01	TCGA-FT-A3EE-01A-11D-A201-01	TCGA-G2-A2EF-01A-12D-A18E-01	TCGA-G2-A2EJ-01A-11D-A17S-01	TCGA-G2-A2EK-01A-22D-A18E-01	TCGA-G2-A2EL-01A-12D-A18E-01	TCGA-G2-A2EO-01A-11D-A17S-01	TCGA-G2-A2ES-01A-11D-A17S-01	TCGA-G2-A3IB-01A-11D-A20B-01	TCGA-G2-A3IE-01A-11D-A20B-01	TCGA-GC-A3I6-01A-11D-A20B-01	TCGA-GD-A2C5-01A-12D-A17S-01	TCGA-GV-A3JW-01A-11D-A20B-01	TCGA-GV-A3JX-01A-11D-A20B-01	TCGA-GV-A3JZ-01A-11D-A219-01	TCGA-H4-A2HO-01A-11D-A17S-01	TCGA-H4-A2HQ-01A-11D-A17S-01	TCGA-HQ-A2OE-01A-11D-A201-01	
Amplification Peak  1	1p34.2  	chr1:39531274-40539227(probes 19150:19617)        	chr1:40264333-40381290(probes 19469:19524)      	chr1:39531715-41085925(probes 19151:19853)      	0.0056607	  0.0056607		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	1	0	1	1	1	0	0	2	0	0	0	0	0	1	0	0	0	2	0	0	2	0	1	0	0	0	0	0	0	1	0	1	0	0	1	1	1	0	0	1	1	0	0	0	0	2	0	1	0	0	0	1	0	0	0	0	1	0	0	0	1	0	2	1	0	0	0	0	1	
Amplification Peak  2	1q23.3  	chr1:161032152-161086944(probes 73778:73805)    	chr1:161033016-161074091(probes 73779:73796)  	chr1:156321155-176072738(probes 70795:83844)  	3.8622e-10	 3.8622e-10		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	2	1	0	0	1	2	0	0	0	0	1	0	1	2	0	1	1	1	2	1	0	0	1	0	0	0	0	1	0	0	2	2	1	1	0	2	0	0	2	2	0	0	0	0	2	1	1	1	2	2	2	1	0	2	1	1	0	1	0	1	0	0	1	0	0	0	1	1	2	0	0	0	0	0	0	0	0	1	1	1	2	1	2	1	
Amplification Peak  3	3p25.2  	chr3:12481505-12491536(probes 266633:266637)      	chr3:12483452-12485885(probes 266634:266636)    	chr3:1-14229471(probes 260552:267756)            	6.4541e-10	 6.4541e-10		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	1	2	0	0	0	0	2	0	0	0	0	0	0	0	2	0	1	1	1	0	0	0	1	0	0	2	1	0	1	0	1	2	0	1	1	2	2	0	0	2	1	0	0	0	1	2	0	2	2	0	0	2	2	0	1	0	1	0	0	0	0	1	1	0	0	0	0	0	2	1	0	0	0	1	1	0	2	0	0	2	0	1	2	0	1	
Amplification Peak  4	4p16.3  	chr4:1752421-1817427(probes 367194:367210)          	chr4:1752532-1816689(probes 367195:367209)        	chr4:1629705-2175732(probes 367129:367343)        	0.0055855	  0.0055855		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	1	1	0	0	1	2	2	2	0	0	0	0	1	0	1	1	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	
Amplification Peak  5	5p15.33 	chr5:1-15331281(probes 469766:479642)               	chr5:1-1287702(probes 469766:469816)               	chr5:1-3334856(probes 469766:471136)               	0.018395	   0.018395		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	0	1	0	0	0	0	0	2	0	0	1	0	2	2	0	2	0	0	1	0	1	0	2	0	1	2	2	0	1	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	1	1	0	0	0	1	1	0	1	2	1	0	0	0	2	0	1	2	1	0	0	0	1	0	1	1	1	0	0	1	2	0	2	1	
Amplification Peak  6	6p22.3  	chr6:20361033-21757620(probes 583987:584846)      	chr6:20783619-20851834(probes 584258:584296)    	chr6:11562906-25923136(probes 577747:587693)    	1.4627e-21	 1.4627e-21		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	1	0	0	0	0	0	0	2	0	0	0	2	0	2	0	2	2	0	0	0	2	0	0	0	0	0	2	0	0	0	0	1	2	1	0	0	2	2	0	0	0	0	1	2	1	2	0	1	1	0	0	1	0	1	0	1	2	0	0	2	1	0	2	0	1	1	2	0	0	0	0	0	0	0	1	1	1	0	2	0	0	2	
Amplification Peak  7	6q21    	chr6:107302810-107457456(probes 629173:629259)  	chr6:107302956-107451530(probes 629174:629258)	chr6:107302956-107458284(probes 629174:629261)	0.15379	    0.15379		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	2	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	
Amplification Peak  8	7p11.2  	chr7:54286143-56022730(probes 698744:699934)      	chr7:55088416-55090869(probes 699248:699254)    	chr7:51719273-57923946(probes 696992:700240)    	9.5403e-06	 9.5403e-06		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	1	0	1	0	2	2	1	0	0	0	0	0	1	1	1	1	1	1	0	0	1	0	1	0	0	1	0	1	2	1	0	1	1	2	0	1	0	0	1	1	0	0	0	1	1	1	1	1	1	1	2	1	0	1	0	1	2	1	1	0	1	2	2	0	2	0	0	2	0	0	0	0	1	0	0	0	2	1	2	0	1	0	1	1	
Amplification Peak  9	8p11.23 	chr8:36905670-37763904(probes 769612:770105)      	chr8:37544498-37550874(probes 770044:770044)    	chr8:36733517-38236889(probes 769504:770280)    	0.0082157	  0.0082157		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	1	0	0	0	1	0	0	0	0	0	0	2	0	0	1	0	1	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	2	1	0	0	0	1	1	0	2	0	1	0	0	0	0	2	0	0	0	1	2	0	0	0	0	0	1	0	2	1	2	1	2	0	0	0	1	
Amplification Peak 10	8q22.2  	chr8:101180651-102354063(probes 803304:804062)  	chr8:101371614-101615461(probes 803394:803568)	chr8:93539199-118303508(probes 798827:812668)  	2.8441e-12	   2.32e-10		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	1	1	0	0	1	1	0	0	0	0	1	0	2	2	1	1	1	2	1	2	1	0	1	1	0	1	1	0	1	0	2	1	1	1	2	2	0	0	1	1	2	0	0	0	2	0	1	2	2	0	2	1	1	1	0	1	0	1	0	0	1	1	1	0	0	2	2	2	0	0	2	0	2	1	0	2	1	0	1	1	2	2	2	2	
Amplification Peak 11	8q24.21 	chr8:119209188-146364022(probes 813327:829782)  	chr8:128214500-128431693(probes 819418:819565)	chr8:118903710-146364022(probes 813086:829782)	2.6052e-07	   0.066402		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	1	1	0	2	1	1	0	0	0	0	1	0	1	2	1	1	1	0	1	2	1	0	1	1	0	1	1	1	1	0	2	1	1	1	1	1	0	0	1	1	1	0	0	0	2	0	1	1	2	0	2	1	1	1	2	1	0	1	0	0	0	1	1	0	0	2	0	2	1	0	2	0	2	1	0	1	1	0	1	1	2	0	2	2	
Amplification Peak 12	10p15.1 	chr10:4197255-6398978(probes 900038:901743)        	chr10:5610350-5628570(probes 901160:901164)      	chr10:1-11830184(probes 897835:905908)           	0.0003082	  0.0003082		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	1	0	1	0	0	1	0	0	2	2	0	0	1	1	0	0	1	2	2	0	1	0	1	0	1	1	0	0	1	0	0	1	1	1	1	0	0	0	2	2	0	0	0	2	1	0	0	1	0	1	1	1	0	0	0	0	2	0	1	0	1	1	0	0	2	0	1	2	0	0	0	0	2	2	0	1	0	1	1	0	0	0	0	1	
Amplification Peak 13	11q13.3 	chr11:69464719-70027203(probes 1015214:1015502)  	chr11:69830437-69896347(probes 1015366:1015422)	chr11:67129272-72689092(probes 1014277:1016846)	2.9265e-09	 2.9265e-09		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	2	0	0	1	1	1	2	1	2	2	0	0	0	0	0	0	1	0	0	1	1	0	1	0	1	2	0	1	0	0	0	0	1	0	0	2	1	1	0	0	0	1	0	0	0	0	0	0	2	2	1	1	1	1	0	1	0	2	1	
Amplification Peak 14	12p13.32	chr12:1-8309432(probes 1056022:1060278)             	chr12:3467829-4347163(probes 1057210:1057825)    	chr12:3467829-4350990(probes 1057210:1057828)    	0.21034	    0.21034		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	1	0	0	2	1	0	2	0	0	0	0	2	2	1	1	1	1	0	1	0	0	0	0	0	1	1	0	1	1	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	2	0	1	0	0	2	
Amplification Peak 15	12q15   	chr12:69120903-70175610(probes 1092585:1093312)  	chr12:69966460-70000333(probes 1093154:1093176)	chr12:68946029-73662796(probes 1092496:1095284)	2.1122e-05	 2.1122e-05		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	1	1	2	0	1	1	0	1	0	1	0	0	1	0	1	0	1	0	0	0	2	0	0	0	2	1	1	2	0	1	1	0	1	1	1	2	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	0	0	0	1	0	1	0	0	2	2	2	
Amplification Peak 16	13q22.1 	chr13:67509993-115169878(probes 1157196:1186670)	chr13:73843930-73997007(probes 1160800:1160935)	chr13:73843930-74003083(probes 1160800:1160938)	0.21688	    0.21688		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	1	1	0	2	2	0	0	1	0	0	1	0	0	0	0	0	2	0	1	0	1	2	0	0	1	0	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	1	1	0	0	1	1	1	1	0	1	0	0	1	1	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	
Amplification Peak 17	16p11.2 	chr16:28605319-30334145(probes 1293933:1294011)  	chr16:29103032-29228592(probes 1293939:1293982)	chr16:28490518-30344970(probes 1293885:1294013)	0.04376	    0.04376		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	2	0	1	0	0	0	0	0	0	1	0	0	1	0	1	2	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	1	2	1	0	0	0	1	0	0	2	1	2	0	0	2	0	0	0	0	0	1	1	0	0	0	1	0	0	1	1	0	1	0	1	0	1	0	
Amplification Peak 18	17q11.2 	chr17:27386448-27864389(probes 1332113:1332316)  	chr17:27687687-27813031(probes 1332259:1332298)	chr17:27388958-28479104(probes 1332114:1332567)	0.014768	    0.05794		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	2	1	0	0	0	0	1	1	1	1	1	0	1	0	0	0	1	1	0	0	1	0	0	1	1	0	1	0	0	1	0	0	1	1	2	0	0	2	1	0	0	0	0	1	1	0	0	1	0	1	0	0	1	0	0	0	1	0	0	1	1	0	0	1	0	1	1	0	0	0	0	2	0	0	1	0	2	1	0	1	0	1	1	
Amplification Peak 19	17q12   	chr17:37813857-37905815(probes 1336707:1336784)  	chr17:37891066-37904210(probes 1336783:1336783)	chr17:37623532-38173352(probes 1336633:1336892)	0.0011087	  0.0015275		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	1	2	1	0	0	0	1	1	1	1	0	1	0	1	1	0	0	1	1	0	0	1	0	0	1	1	0	1	0	0	2	0	0	2	2	1	0	0	0	1	0	0	0	0	1	1	0	2	0	0	1	0	0	1	0	0	0	1	0	0	1	1	1	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	2	1	1	1	
Amplification Peak 20	19q12   	chr19:30245583-30529931(probes 1411742:1411947)  	chr19:30478432-30526125(probes 1411922:1411944)	chr19:29215149-32985841(probes 1410914:1413663)	2.4183e-07	 2.4183e-07		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	1	0	0	1	2	1	0	0	0	0	0	2	2	1	2	1	2	0	1	1	0	1	0	1	1	0	0	2	0	0	2	2	0	1	2	0	1	0	2	0	0	0	1	0	0	1	2	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	1	1	0	0	0	1	0	0	1	0	1	2	0	2	0	1	1	
Amplification Peak 21	20q11.21	chr20:30064458-31121563(probes 1442104:1442582)  	chr20:30110754-30270838(probes 1442127:1442191)	chr20:30072987-31128557(probes 1442105:1442584)	0.028443	   0.028443		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	1	2	1	0	1	1	0	2	1	1	1	0	2	1	1	0	0	1	1	1	2	1	2	0	1	1	0	1	1	1	1	1	0	1	2	1	0	0	1	1	0	0	0	1	1	1	1	1	1	2	1	1	1	2	0	1	2	1	1	0	0	1	1	0	1	0	2	1	1	1	1	0	1	0	0	0	2	1	1	1	1	0	1	2	
Amplification Peak 22	22q11.23	chr22:22281639-26820434(probes 1483886:1485517)  	chr22:25346762-25421569(probes 1484500:1484556)	chr22:22281655-26821417(probes 1483887:1485519)	0.014768	   0.014768		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	2	0	0	0	2	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	2	0	1	0	1	0	0	0	0	0	2	1	0	0	0	0	0	2	0	0	0	1	1	0	2	1	1	0	0	1	0	0	1	
Deletion Peak  1	1p36.11 	chr1:1-117645743(probes 1:66136)                	chr1:26601386-26902880(probes 12580:12700)          	chr1:26639145-27119974(probes 12583:12760)          	0.089446	   0.088646		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  2	2q22.1  	chr2:139655617-143637838(probes 201409:203839)	chr2:140976294-142894275(probes 202131:203402)    	chr2:141646698-142557129(probes 202510:203167)    	4.0754e-08	 4.2025e-07		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	0	1	0	0	1	0	1	1	0	1	0	0	1	0	1	0	0	0	1	0	0	1	1	0	0	1	1	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	1	0	0	1	1	0	1	0	0	0	0	0	0	1	0	1	0	0	0	
Deletion Peak  3	2q34    	chr2:213401694-214143899(probes 242874:243376)	chr2:213789275-213792626(probes 243111:243112)    	chr2:213551095-214659585(probes 242976:243603)    	2.9364e-05	  0.0093461		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	0	1	0	0	0	0	1	0	1	1	1	1	0	0	1	0	0	0	1	0	1	0	0	1	1	0	0	1	0	1	0	0	0	0	1	1	0	0	0	1	1	1	0	0	1	1	1	0	0	1	1	0	1	0	0	1	1	0	0	0	1	0	0	0	1	0	1	1	0	0	0	0	0	0	1	0	0	0	0	1	
Deletion Peak  4	2q37.1  	chr2:214143901-243199373(probes 243378:260551)	chr2:233604893-234686156(probes 255112:255712)    	chr2:215266520-243199373(probes 243943:260551)    	0.0010542	   0.036753		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	1	1	0	0	1	0	1	0	1	1	1	1	0	0	1	0	0	1	1	0	1	1	0	1	1	0	1	1	0	1	0	0	0	0	1	1	0	0	1	1	1	0	0	0	1	1	1	0	0	1	1	1	1	0	0	1	1	0	0	0	1	0	0	0	1	0	1	1	0	0	0	0	0	0	1	1	0	0	0	1	
Deletion Peak  5	3p21.31 	chr3:25755999-84920597(probes 274603:308889)    	chr3:48397047-48440177(probes 287680:287690)        	chr3:45987981-82823845(probes 286564:308001)        	0.025941	    0.16067		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	1	0	0	0	0	0	1	0	1	0	1	0	0	0	1	1	0	0	1	0	0	0	0	0	1	1	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	1	0	1	0	1	0	0	1	0	0	0	1	1	0	1	0	1	1	0	1	0	1	0	0	0	1	1	
Deletion Peak  6	3p14.2  	chr3:1-198022430(probes 260552:366976)          	chr3:59702822-61238217(probes 293971:294172)        	chr3:45987981-82823845(probes 286564:308001)        	0.0043233	    0.72395		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1	0	0	0	1	1	0	0	1	0	0	0	0	0	1	0	1	1	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	1	0	0	0	1	0	1	0	1	0	0	1	0	0	0	1	1	0	0	0	1	1	1	1	0	1	0	0	0	1	1	
Deletion Peak  7	3p14.1  	chr3:40211012-88046665(probes 283305:310337)    	chr3:68032162-68596629(probes 299101:299507)        	chr3:45987981-82823845(probes 286564:308001)        	0.020403	    0.12578		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	1	1	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	1	1	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	1	0	1	0	1	0	0	1	0	0	0	1	1	1	0	0	0	1	0	1	0	1	0	0	0	1	1	
Deletion Peak  8	3p11.2  	chr3:1-198022430(probes 260552:366976)          	chr3:87247201-87328364(probes 310026:310056)        	chr3:86772336-87636244(probes 309773:310229)        	0.10817	    0.33256		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	0	1	1	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	1	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	1	0	
Deletion Peak  9	4q22.1  	chr4:90844993-93240505(probes 416880:418037)    	chr4:91035787-92526033(probes 416927:417725)        	chr4:91380058-92054562(probes 417115:417528)        	5.7425e-06	 1.7413e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	1	1	0	1	1	1	1	0	0	1	0	1	1	1	1	0	1	0	0	1	0	0	0	1	0	0	0	1	1	1	0	1	1	0	1	1	1	0	1	0	0	1	1	0	0	1	1	0	0	0	0	0	1	0	0	1	1	1	1	0	0	1	0	0	0	0	1	0	
Deletion Peak 10	4q31.21 	chr4:90804644-191154276(probes 416851:469765)  	chr4:142947547-143771324(probes 445306:445845)    	chr4:143321910-143327731(probes 445576:445577)    	0.088002	    0.16562		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	1	1	0	1	0	1	1	0	0	1	0	1	1	1	1	0	1	0	0	1	0	0	0	1	0	0	1	1	1	0	0	1	1	1	1	1	0	0	1	0	0	0	1	0	0	1	0	0	0	0	1	0	1	0	0	1	0	0	1	1	0	1	1	0	0	0	1	0	
Deletion Peak 11	5q11.2  	chr5:58260298-59787985(probes 500855:501799)    	chr5:58260298-59787985(probes 500855:501799)        	chr5:50124857-78425187(probes 495714:511683)        	6.6605e-09	 6.6605e-09		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	1	0	1	1	0	0	0	1	1	0	1	1	0	1	1	1	0	0	1	1	1	0	0	1	1	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	1	0	1	1	1	1	1	1	1	1	1	1	1	1	0	0	1	1	0	0	1	0	0	0	1	0	0	1	0	0	1	0	0	1	1	1	0	0	1	1	
Deletion Peak 12	6p25.3  	chr6:1-4026921(probes 570314:572561)              	chr6:1309651-1315945(probes 570616:570618)            	chr6:1-1877957(probes 570314:571014)                  	0.042133	   0.042571		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	1	1	0	1	0	0	1	1	1	1	0	0	1	0	0	0	0	1	0	0	0	0	1	0	1	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	0	
Deletion Peak 13	6q22.31 	chr6:92230434-122757952(probes 620965:637814)  	chr6:119497524-119674502(probes 635993:636104)    	chr6:105959607-122527365(probes 628226:637691)    	0.0014245	  0.0014245		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	1	0	0	0	0	1	0	1	0	0	0	1	1	0	1	0	1	0	0	0	1	0	1	0	0	0	0	1	0	1	1	0	1	0	0	0	0	0	1	1	1	1	0	1	1	0	0	1	1	1	0	0	1	0	0	1	0	0	0	0	0	1	0	0	1	0	0	1	1	0	1	1	0	1	1	1	0	1	1	
Deletion Peak 14	8p23.1  	chr8:1-39792913(probes 748205:770960)             	chr8:12577793-12585729(probes 753292:753293)        	chr8:12562456-13222153(probes 753285:753811)        	0.10817	    0.10817		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	1	0	1	1	0	0	1	1	0	0	0	1	1	0	1	1	1	1	0	1	0	0	1	1	0	0	1	1	1	0	1	1	1	1	1	1	1	0	1	1	1	0	0	1	1	1	1	0	1	0	1	0	1	0	1	0	0	0	0	1	0	1	0	1	1	0	1	0	
Deletion Peak 15	9p23    	chr9:1-21008376(probes 829783:842634)             	chr9:8310705-10619051(probes 834328:835662)          	chr9:9216981-9221296(probes 834996:834997)            	0.0036188	    0.12578		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	1	1	1	0	0	1	0	1	0	0	1	1	1	1	0	0	1	0	1	0	1	1	1	1	1	0	1	0	1	1	0	0	0	1	1	0	0	0	1	1	0	1	0	0	0	1	0	0	1	1	1	1	0	0	1	0	1	1	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	1	0	0	0	1	1	
Deletion Peak 16	9p21.3  	chr9:21865498-22448737(probes 843222:843585)    	chr9:21959052-21997722(probes 843272:843285)        	chr9:20057788-24075081(probes 841943:844665)        	5.9073e-47	  1.357e-45		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	0	1	1	1	1	0	1	1	0	1	1	1	1	1	0	1	0	0	1	1	1	0	1	1	1	1	1	0	1	0	1	1	1	0	0	1	1	0	0	1	1	1	0	1	0	0	0	1	0	0	1	1	1	1	0	0	1	0	0	1	0	0	0	0	1	1	0	1	0	0	0	1	0	1	1	0	0	1	0	0	0	1	1	
Deletion Peak 17	9q22.33 	chr9:101016723-101979393(probes 873199:873937)	chr9:101864709-101918083(probes 873871:873906)    	chr9:101903956-101907671(probes 873889:873890)    	0.113	    0.11097		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	0	0	1	0	1	1	0	1	0	0	0	0	0	1	1	0	0	1	1	0	1	1	1	1	0	0	1	0	1	0	1	1	0	1	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	1	1	1	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	1	1	1	0	0	1	0	1	1	0	0	0	0	1	
Deletion Peak 18	10q23.31	chr10:89617158-91063177(probes 950039:951117)  	chr10:89617402-89735596(probes 950040:950228)      	chr10:89560539-89701031(probes 950008:950155)      	0.0032676	  0.0032676		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	1	0	0	0	1	0	1	1	1	0	0	0	1	0	1	1	0	0	1	0	0	0	0	0	1	0	1	0	1	0	1	0	0	0	1	0	0	0	1	0	1	0	1	1	1	1	1	0	1	0	0	1	1	0	0	0	1	0	0	1	0	0	0	0	0	1	1	0	0	1	1	0	0	1	1	1	0	1	0	
Deletion Peak 19	11q13.4 	chr11:1-135006516(probes 978737:1056021)        	chr11:6513597-128815336(probes 981575:1052770)     	chr11:6530139-6533230(probes 981585:981586)          	0.07006	   0.070635		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	1	1	0	0	0	0	0	1	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	
Deletion Peak 20	12p13.2 	chr12:3980957-24365820(probes 1057531:1069718)  	chr12:11477352-11718581(probes 1061592:1061705)    	chr12:11477536-11582896(probes 1061593:1061594)    	0.12958	    0.13163		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	
Deletion Peak 21	13q14.2 	chr13:45382430-50471178(probes 1146387:1149612)	chr13:48984816-48992809(probes 1148762:1148772)    	chr13:37870521-62943883(probes 1141487:1155355)    	1.1701e-06	 1.1701e-06		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	1	0	0	0	1	0	0	0	1	1	0	1	0	1	1	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	1	1	0	0	1	0	1	1	1	1	0	1	1	1	0	0	0	1	1	1	0	1	1	1	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	1	1	0	0	0	1	
Deletion Peak 22	14q32.32	chr14:1-107349540(probes 1186671:1236138)     	chr14:102823875-104331556(probes 1234969:1235691)	chr14:102885225-102959276(probes 1234991:1235033)	0.24602	    0.24257		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	1	1	0	0	0	1	0	0	0	0	0	1	0	1	1	0	1	1	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	1	0	1	1	
Deletion Peak 23	15q13.1 	chr15:1-32934882(probes 1236139:1239382)       	chr15:28097279-31135788(probes 1238812:1238826)    	chr15:1-32934882(probes 1236139:1239382)           	0.0050497	  0.0051122		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	1	0	1	1	0	0	0	0	0	0	0	1	1	0	1	1	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	1	0	0	0	1	0	1	1	0	0	0	1	1	0	0	0	0	0	1	1	0	0	0	0	0	1	0	1	0	1	0	0	1	0	0	0	1	0	0	1	1	0	0	1	1	
Deletion Peak 24	16p13.3 	chr16:3029029-4013466(probes 1281311:1281746)    	chr16:3773626-3933344(probes 1281600:1281702)        	chr16:1-5248571(probes 1280689:1282370)               	7.6082e-05	 7.6135e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	1	0	0	1	0	0	0	1	0	0	0	1	0	1	1	0	0	0	1	0	1	0	0	0	0	0	1	0	0	1	1	0	0	1	0	0	0	0	0	0	0	1	0	0	1	1	1	0	1	1	0	0	1	0	1	0	1	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	1	1	1	1	0	1	1	
Deletion Peak 25	16q23.1 	chr16:78129058-79627770(probes 1313916:1315281)	chr16:78129058-79247026(probes 1313916:1314929)    	chr16:78583258-78586506(probes 1314423:1314424)    	0.088002	   0.086273		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	1	1	1	1	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	1	1	0	0	0	0	0	1	0	0	0	1	1	0	1	1	
Deletion Peak 26	17p12   	chr17:14131834-15999789(probes 1328971:1329115)	chr17:15583978-15695417(probes 1328981:1328987)    	chr17:15557741-17326362(probes 1328973:1329712)    	0.00011404	 0.00011949		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	0	0	0	1	1	0	1	1	0	1	0	0	0	1	1	1	0	1	1	0	1	1	1	0	1	0	1	0	0	0	1	0	1	1	1	0	1	1	1	0	0	0	1	1	0	0	1	1	1	0	1	1	1	1	0	1	1	0	1	1	0	0	0	0	0	1	0	1	1	0	1	1	0	0	1	0	1	0	0	1	0	1	1	
Deletion Peak 27	19p13.3 	chr19:1-9203991(probes 1401192:1404023)           	chr19:1-462697(probes 1401192:1401232)                 	chr19:1-9081766(probes 1401192:1403965)               	0.013136	   0.013317		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	1	0	0	0	0	1	1	0	1	1	0	0	1	1	1	0	1	1	1	0	0	1	0	0	0	0	0	0	0	1	0	1	0	1	0	1	0	0	0	1	0	0	0	1	0	1	0	1	1	0	1	0	1	1	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	1	1	1	0	0	1	1	1	1	1	0	
Deletion Peak 28	22q13.32	chr22:34146369-51304566(probes 1490564:1499980)	chr22:49174995-49176650(probes 1499901:1499902)    	chr22:49091880-49288584(probes 1499799:1499949)    	0.14542	    0.14542		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	1	0	0	0	0	1	0	0	1	1	0	0	0	0	1	1	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	1	1	0	0	1	1	1	1	0	1	0	0	1	1	1	1	1	0	0	1	0	1	0	1	0	0	0	0	0	1	1	0	1	0	1	0	0	1	0	
Deletion Peak 29	Xq23    	chrX:77910652-128658341(probes 1529373:1552298)	chrX:110361510-110469654(probes 1543520:1543583)  	chrX:110406757-110413449(probes 1543552:1543553)  	0.086273	   0.086273		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	1	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	1	0	0	1	1	
Amplification Peak  1 - CN values	1p34.2  	chr1:39531274-40539227(probes 19150:19617)        	chr1:40264333-40381290(probes 19469:19524)      	chr1:39531715-41085925(probes 19151:19853)      	0.0056607	  0.0056607		Actual Copy Change Given	-0.076412	-0.0024938	-0.034768	-0.0085943	-0.017291	0.010982	3.6569	0.076279	0.069956	0.012396	0.00055459	0.77947	-0.19987	0.024766	-0.025023	0.01241	0.03369	0.43159	-0.0024938	0.2233	0.18328	0.11418	-0.0022168	-0.30287	1.2116	0.096234	-0.00063369	-0.011749	0.0072267	-0.38314	0.14631	-0.1412	-0.36329	0.041458	2.0443	0.0040243	-0.54118	1.8842	0.028622	0.49909	-0.026653	0.0041632	0.0071141	-0.092669	0.01094	0	0.43176	-0.3024	0.26468	0	0.0072605	0.15844	0.37545	0.12748	-0.12733	0	0.33577	0.14087	0.0019418	-0.25443	0	0.028622	1.4039	-0.055364	0.12409	0.029676	0.010842	0.021043	0.12444	-0.063703	0.0054139	-0.0010947	0.039054	0.75681	-0.029783	-0.045087	-0.0034148	0.20183	-0.044845	3.6569	0.17422	0.025812	-0.047056	-0.03395	0.042449	0.5713	
Amplification Peak  2 - CN values	1q23.3  	chr1:161032152-161086944(probes 73778:73805)    	chr1:161033016-161074091(probes 73779:73796)  	chr1:156321155-176072738(probes 70795:83844)  	3.8622e-10	 3.8622e-10		Actual Copy Change Given	3.0494	-0.0024938	3.6569	0.62654	-0.017291	0	0.38155	1.0639	0.069956	0.0029284	-0.0048461	0.0069589	0.64724	0.024766	0.46411	1.8485	0.03369	0.47341	0.34697	0.28137	0.93488	0.11418	-0.0022168	-0.10053	0.60575	-0.00063361	0.0065262	-0.0092666	0.015587	0.43885	0.023644	-0.1412	1.5487	1.0285	0.40661	0.39031	-0.011335	3.4302	0.09246	0.0029133	1.625	2.219	0.0025283	-0.023215	0.01094	-0.29733	2.7549	0.44901	0.35218	0.72943	2.025	1.2702	1.4257	0.12748	-0.12473	2.534	0.26467	0.64854	0.0019418	0.65089	0	0.63975	0.088181	-0.055364	0.12409	0	0.010424	0.0029133	0.1825	0.55679	0.9146	-0.0010947	0.019363	0.021463	-0.014641	-0.0020784	0.045274	-0.2368	-0.044845	0.69352	0.17422	0.54303	2.5109	0.6257	2.9764	0.74461	
Amplification Peak  3 - CN values	3p25.2  	chr3:12481505-12491536(probes 266633:266637)      	chr3:12483452-12485885(probes 266634:266636)    	chr3:1-14229471(probes 260552:267756)            	6.4541e-10	 6.4541e-10		Actual Copy Change Given	3.6569	0.21914	1.004	-0.034786	-0.017941	-0.0075547	0.0076392	1.0088	0.0030522	-0.013249	-0.0031859	0.073131	-0.079476	0.022031	-0.47606	0.9709	-0.35965	0.45496	0.34502	0.77022	-0.17132	-0.14571	0.011261	0.59404	-0.25125	0.017264	0.93963	0.47025	0.0080567	0.48595	-0.25401	0.15412	3.6569	-0.55717	0.34655	0.4168	1.0272	1.5045	0	-0.55827	1.1638	0.32592	-0.0095114	-0.0047767	0.006109	0.32656	3.1505	-0.32147	2.5052	1.9174	0.027357	0.0087528	2.3388	3.6569	0.020957	0.22561	0.051387	0.15065	0.0012481	-0.45319	-0.0027707	-0.20685	0.14221	0.3579	0.052952	-0.0027018	-0.46664	-0.0040903	-0.011417	1.165	0.10614	-0.66002	0.0081959	0.026233	0.13155	0.51002	-0.86153	1.2775	-0.16408	0.0091583	2.57	0.013074	0.49476	3.6569	-0.20697	0.88646	
Amplification Peak  4 - CN values	4p16.3  	chr4:1752421-1817427(probes 367194:367210)          	chr4:1752532-1816689(probes 367195:367209)        	chr4:1629705-2175732(probes 367129:367343)        	0.0055855	  0.0055855		Actual Copy Change Given	1.9942	-0.0036011	-0.069867	-0.042021	-0.050641	-0.0085807	-0.33583	0.080168	-0.013778	3.6569	0.012934	-0.28262	0.94731	-0.0026946	-0.52081	-0.32289	-0.14028	-0.042517	-0.34641	-0.19912	-0.10092	0.30011	0.34307	-0.25467	-0.34297	0.81123	0.99696	0.95734	1.3718	-0.61825	-0.22471	-0.2781	-0.01904	0.51961	0.0084253	0.45224	0.5135	-0.47782	-0.0049844	0.014609	0.45837	-0.4504	0.0032224	0.0011866	-0.0026322	-0.40274	-0.38884	0.43902	-0.068529	0.21929	-0.011887	0.010842	0.20934	-0.45918	0.024127	3.6569	-0.59487	-0.056577	-0.5431	0	-0.16603	0.038771	-0.35565	-0.083896	-0.18961	-0.00906	-0.0095426	-0.0091286	0.31656	-0.07955	-0.16574	0.0026497	0.0075	0.0076392	0.57006	0.47907	-0.84788	0.0098669	-0.045384	-0.48473	0	0	-0.0696	0.65977	-0.19425	-0.078544	
Amplification Peak  5 - CN values	5p15.33 	chr5:1-15331281(probes 469766:479642)               	chr5:1-1287702(probes 469766:469816)               	chr5:1-3334856(probes 469766:471136)               	0.018395	   0.018395		Actual Copy Change Given	0.99488	-0.03243	-0.093153	0.44217	-0.1586	-0.0038779	-0.21651	-0.61249	-0.01012	0.92393	0.0056919	-0.020067	0.17845	-0.0083065	2.1322	3.6569	-0.057924	0.92574	-0.39553	-0.19036	0.49424	-0.022951	0.29787	-0.20685	2.5293	0.023145	0.51856	1.0902	1.3858	-0.40793	0.33327	0.019923	0.30585	-0.12082	0.33399	-0.017666	-0.017254	0.0351	0.045566	0.012376	-0.043873	0.41329	-0.030509	-0.0034995	0	-0.038254	0.067232	-0.0099565	0.47735	0.319	-0.10972	-0.28163	0.72055	0.71538	0.0042866	-0.30487	0.0041632	0.71058	0.48802	-0.39736	0.72641	1.878	0.72678	-0.13316	0	0.060865	1.403	-0.01354	0.23935	1.1033	0.8163	-0.029055	0.0024969	-0.041295	0.20137	0	0.8697	0.83176	0.44967	0.008734	0.075415	0.79103	2.9195	0.0087528	1.0356	0.33707	
Amplification Peak  6 - CN values	6p22.3  	chr6:20361033-21757620(probes 583987:584846)      	chr6:20783619-20851834(probes 584258:584296)    	chr6:11562906-25923136(probes 577747:587693)    	1.4627e-21	 1.4627e-21		Actual Copy Change Given	0	-0.0040162	0.84396	0	0.13835	-0.0029091	0.071035	-0.17866	0	-0.0078713	-0.0069195	3.6569	0.0026357	0.071967	0	1.9958	-0.36374	3.6569	-0.35681	3.6569	3.6569	0	-0.014641	-0.10736	3.5709	0.015028	-0.031918	-0.25422	0.012934	0.064368	2.673	-0.0019399	-0.037626	-0.028765	0.018103	0.42402	3.4923	0.52766	-0.0041546	-0.56416	3.6569	3.6569	-0.001216	-0.0191	-0.011335	-0.29367	0.58811	2.6712	0.69204	1.0669	0.084787	0.51577	0.22947	0	0.015512	0.2196	-0.29201	0.86513	0	0.19771	1.8061	-0.0041546	0.086811	3.6569	0.30154	0.012939	3.6569	0.001803	0.37394	0.55319	1.1689	0.0075141	-0.0062286	0.0013868	-0.19432	-0.027579	0.06989	0.0077783	0.4576	0.34342	0.56276	0.045105	3.6569	-0.012162	-0.2463	0.92432	
Amplification Peak  7 - CN values	6q21    	chr6:107302810-107457456(probes 629173:629259)  	chr6:107302956-107451530(probes 629174:629258)	chr6:107302956-107458284(probes 629174:629261)	0.15379	    0.15379		Actual Copy Change Given	0.047803	-0.0040162	-0.0051227	0.0064739	0.15069	-0.011335	3.6569	-0.18407	0	-0.0078713	-0.0069195	-0.040465	-0.86492	0.074775	-0.42144	0.0114	-0.020687	0.50759	-0.35681	-0.18332	0.0033299	-0.12824	-0.014641	-0.23728	0.10337	-0.023977	-0.019314	-0.24265	-0.014366	-0.36997	-0.0061516	-0.0019399	0.4081	-0.066595	2.8787	0.0011093	-0.55226	3.6569	-0.0041546	-0.56416	0.42721	-0.047289	0.00754	-0.0191	-0.011335	-0.29236	-0.40738	-0.16332	-0.15242	-0.46589	-0.20983	-0.51414	-0.091155	0	-0.35909	-0.29235	-0.28788	0.001803	-0.025686	-0.83381	0.047078	-0.010949	-0.3559	-0.089046	-0.059135	0.012939	-0.015466	0.001803	-0.019752	-0.071309	0.038489	0.0015395	-0.014503	0.018243	-0.17132	-0.51897	0.06989	-0.16675	-0.23425	0.39795	-0.92979	-0.53531	-0.0019399	0.0052749	-0.96915	-1.1987	
Amplification Peak  8 - CN values	7p11.2  	chr7:54286143-56022730(probes 698744:699934)      	chr7:55088416-55090869(probes 699248:699254)    	chr7:51719273-57923946(probes 696992:700240)    	9.5403e-06	 9.5403e-06		Actual Copy Change Given	0.65479	-0.0022168	0.54318	-0.025376	0.46058	-0.0042929	1.8148	1.1981	0.12226	-0.0028646	0.0013868	0.028075	0	0.025889	0.4441	0.11858	0.25339	0.32173	0.36428	0.60702	-0.061823	-0.058454	0.72981	-0.24496	0.41949	0.0083351	-0.047014	0.44892	0	0.47821	3.6569	0.43817	-0.016704	0.46178	0.32109	2.3181	0.047694	0.41513	-0.00069303	0.0049969	0.4832	0.33169	0.042121	0.047838	0.031718	0.38915	0.49061	0.67922	0.28596	0.72685	0.54506	0.44965	1.4271	0.28501	0.0081959	0.20999	0.0116	0.28501	1.0759	0.14418	0.18597	0.066231	0.53099	3.6569	2.5709	0.0079868	3.6569	-0.0087146	-0.048638	1.7324	0.0020589	-0.014765	0	-0.018353	0.31177	0.0029133	0.066658	0.043015	0.91518	0.39878	3.6269	-0.0031859	0.84475	-0.0016629	0.11888	0.4158	
Amplification Peak  9 - CN values	8p11.23 	chr8:36905670-37763904(probes 769612:770105)      	chr8:37544498-37550874(probes 770044:770044)    	chr8:36733517-38236889(probes 769504:770280)    	0.0082157	  0.0082157		Actual Copy Change Given	-0.32959	0.0027745	0.39828	0.58661	-0.044957	0.0024969	0.033831	0.41905	-0.00012065	-0.0084236	0.010381	-0.064628	-0.040616	0.0028508	1.2468	-0.75866	-0.029175	0.22499	-0.2233	0.72055	-0.63944	-0.59801	0.48354	0.03121	-0.1088	0.19695	0.0059503	0.39828	-0.015604	-0.86232	-0.32767	-0.033814	-0.37512	-0.55667	-0.34813	0.39346	-0.073079	-0.15771	0.024548	0.012795	-0.00027724	0.88006	-0.0074878	0.0041755	0.0058893	-0.28096	0.53942	0.060651	-0.40628	2.0017	0.79665	-0.54854	-0.80609	-0.44652	0.13495	0.23504	-0.62789	1.046	-0.56545	0.16325	-0.048342	-0.024935	-0.26937	-0.61863	1.2477	0.038072	-0.4985	-0.0044312	0.66094	1.1916	-0.44469	0	-0.44318	0.051245	-0.033375	0.469	0.042469	1.2775	0.66158	1.6203	0.49649	3.6569	-0.039937	-0.0029183	-0.97345	0.56393	
Amplification Peak 10 - CN values	8q22.2  	chr8:101180651-102354063(probes 803304:804062)  	chr8:101371614-101615461(probes 803394:803568)	chr8:93539199-118303508(probes 798827:812668)  	2.8441e-12	   2.32e-10		Actual Copy Change Given	3.5182	0.0027745	0.86731	0.58661	-0.045228	0.0024969	0.31659	0.68403	0.0019418	-0.0084236	0.010381	-0.064628	0.13332	0.0028508	0.95366	1.4714	0.34632	0.22499	0.21054	3.4362	0.6403	0.96934	0.48354	0.03121	0.60647	0.20183	0.029184	0.30697	0.766	0.023566	0.32552	-0.033814	3.4498	0.4958	0.20289	0.43108	3.6569	2.922	0.024548	0.012795	0.87747	0.63061	1.4709	0.0041755	0.0038854	0.048688	1.0574	0.060651	0.33011	2.4478	1.7832	-0.51989	3.6569	0.11682	0.12948	0.25777	-0.046583	0.25683	-0.057654	0.13411	-0.048342	-0.03138	0.51228	0.42856	0.22978	0.038072	-0.013127	1.4345	3.6569	1.1216	0.02525	0.012669	0.97305	0.046842	2.3945	0.53995	0.091445	1.1516	0.66158	0.014749	0.5516	0.1227	0.92649	3.2982	1.087	0.90875	
Amplification Peak 11 - CN values	8q24.21 	chr8:119209188-146364022(probes 813327:829782)  	chr8:128214500-128431693(probes 819418:819565)	chr8:118903710-146364022(probes 813086:829782)	2.6052e-07	   0.066402		Actual Copy Change Given	0.52713	0.0027745	0.86731	0.58661	-0.040752	2.4061	0.31161	0.68403	0.0019418	0.0030641	0.010381	-0.064628	0.13954	0.0028508	0.84338	1.3578	0.34632	0.22499	0.20218	0.049682	0.60702	3.6569	0.48354	0.031718	0.60647	0.20183	0.029184	0.30393	0.766	0.46075	0.31225	-0.033814	3.6309	0.49701	0.20289	0.42469	0.50134	0.41814	0.024548	0.012795	0.79029	0.63061	0.78161	0.0041755	0.0038854	-0.62617	1.0574	0.060651	0.33011	0.37561	1.0945	-0.51989	3.6569	0.13984	0.1437	0.37858	1.0287	0.25683	-0.057654	0.13411	-0.048342	-0.016473	-0.058866	0.42856	0.22978	0.038983	0.043938	1.4198	-0.02117	1.1227	0.46588	0.012669	0.95353	0.046842	3.6569	0.58005	0.037019	0.67067	0.66158	0.014749	0.67715	0.1227	1.7529	0.0033299	1.087	0.90875	
Amplification Peak 12 - CN values	10p15.1 	chr10:4197255-6398978(probes 900038:901743)        	chr10:5610350-5628570(probes 901160:901164)      	chr10:1-11830184(probes 897835:905908)           	0.0003082	  0.0003082		Actual Copy Change Given	0.63938	0.0054139	0.79316	-0.045198	0.11829	0.0052749	0.02511	0.75013	-0.0076101	0.0098821	2.3933	0.93266	0.0016642	-0.21038	0.42975	0.29374	0	-0.59497	0.34128	1.6288	0.90271	-0.42659	0.14325	0.038489	0.37726	-0.18949	0.48802	0.45956	-0.04428	0.093316	0.14437	-0.089964	-0.36542	0.87687	0.55372	0.79142	0.48699	0.0062481	0.0089242	-0.0089906	2.0731	1.3339	-0.0017373	0.017342	0.007917	2.964	0.41128	-0.29189	0.049682	0.56828	0.040609	0.47735	0.36592	0.40044	0.0070826	-0.32391	0.016565	-0.056981	0.94895	-0.32472	0.42974	-0.67477	0.11228	0.24062	-0.13109	-0.020258	1.2827	-0.0092666	0.89724	1.2387	0.053948	-0.015177	0.046133	-0.90758	3.6569	0.99314	-0.10854	0.13554	-0.057139	0.28992	0.50012	0.019923	-0.07361	-0.0096806	0.061794	0.75624	
Amplification Peak 13 - CN values	11q13.3 	chr11:69464719-70027203(probes 1015214:1015502)  	chr11:69830437-69896347(probes 1015366:1015422)	chr11:67129272-72689092(probes 1014277:1016846)	2.9265e-09	 2.9265e-09		Actual Copy Change Given	-0.21069	-0.00055444	1.5517	-0.024602	0	0.0055529	-0.051451	0.19208	-0.0048461	0.00084698	-0.010422	0.018538	0.0080567	0	-0.49642	0.05153	0.060079	0.43226	0.0051359	0	-0.30204	0.008743	0.12504	0	0.17573	0.013353	-0.53236	2.7773	-0.043195	0.0012481	0.32695	0.12505	0.3285	3.6569	0.30186	3.6569	3.6569	-0.13005	0.0056919	-0.0044312	-0.48921	0.073546	-0.0034315	0.44385	0.00027728	0.017264	0.42099	0.24934	-0.019177	0.12196	0.025812	0.59138	3.2209	-0.41564	0.21852	0.091735	-0.0015243	0.017391	-0.0023553	0.14741	0.059866	-0.0062286	1.096	0.27143	0.3137	-0.012783	0.013492	-0.0032837	0.25056	-0.068797	-0.0059424	0.0012621	0.0012481	-0.015604	-0.070536	3.6569	3.0898	0.65314	0.42006	0.43243	0.54431	0.0019418	0.43142	-0.043466	2.3226	0.21545	
Amplification Peak 14 - CN values	12p13.32	chr12:1-8309432(probes 1056022:1060278)             	chr12:3467829-4347163(probes 1057210:1057825)    	chr12:3467829-4350990(probes 1057210:1057828)    	0.21034	    0.21034		Actual Copy Change Given	0.30161	0.0048579	-0.041295	0.59649	0.052952	-0.0053992	1.3143	0.71629	0.012097	0.92799	0.075753	-0.055238	-0.010232	-0.0031098	3.6569	1.8299	0.18677	0.56632	0.21085	0.63207	-0.033814	0.17799	-0.0066432	0.045141	0.04883	0.0086135	-0.016567	0.28533	0.78254	-0.87197	0.33846	0.12299	0.52101	0.49632	-0.061823	0.013772	0.46519	-0.077478	0.0016642	0.0043021	-0.489	-0.0088526	0.0040557	0.0022236	-0.0051227	0.056513	0.04259	-0.0036011	0.058367	-0.012576	0.0058309	-0.55647	0.58883	-0.15338	0.012934	0.22222	0.012934	-0.013264	-0.10289	-0.27834	0.20503	0.00458	0.094056	0.68403	-0.0078863	0.034465	0.0038854	-0.0022168	0.51905	-0.043195	-0.0067813	0.00056862	-0.016017	0.065656	0.23495	0.0094491	-0.047531	0.04954	0.43493	-0.073476	3.6569	-0.017529	0.45122	-0.010646	-0.037626	1.3187	
Amplification Peak 15 - CN values	12q15   	chr12:69120903-70175610(probes 1092585:1093312)  	chr12:69966460-70000333(probes 1093154:1093176)	chr12:68946029-73662796(probes 1092496:1095284)	2.1122e-05	 2.1122e-05		Actual Copy Change Given	0.34681	0.0019418	0.32189	0.59649	3.6569	-0.0020784	0.36871	0.5953	0.012097	0.87931	0.075753	0.20456	0.0017182	-0.0031098	0.69	-0.0091286	0.17528	-0.033541	0.21085	-0.21886	0.060794	-0.33387	3.6569	0.043069	0.04883	-0.00024314	1.0629	0.28533	0.77634	1.3184	-0.31694	0.12299	0.45922	-0.065581	0.28496	0.39579	0.50266	3.6569	-0.0030169	0.0043021	0.4681	-0.0088526	0.0040557	0.0077167	-0.0051227	0.024829	0.04259	-0.0036011	0.4958	-0.17246	0.022865	-0.0089911	-0.025072	-0.13406	0.013074	0.39048	0.0083351	-0.013264	-0.10289	-0.28108	-0.016292	0.00458	0.056957	-0.30275	-0.0078863	0.034465	-0.0020211	0.00013863	-0.0092925	-0.043195	0.39297	0.015322	3.6569	0.077286	0.29596	0.048262	0.041741	0.04954	0.43629	-0.011198	0.53204	-0.017529	-0.032314	1.4084	3.6553	1.3855	
Amplification Peak 16 - CN values	13q22.1 	chr13:67509993-115169878(probes 1157196:1186670)	chr13:73843930-73997007(probes 1160800:1160935)	chr13:73843930-74003083(probes 1160800:1160938)	0.21688	    0.21688		Actual Copy Change Given	-0.0067813	-0.0069195	-0.42767	0.57891	0.73473	-0.0074777	0.98369	2.1655	-0.0036011	-0.015589	0.62224	-0.38155	-0.14515	0.10841	-0.4241	0.060044	-0.34618	-0.44113	-0.014916	1.511	-1.2929	0.63792	-0.0036011	0.29995	1.1231	-0.005961	0.015308	0.4424	-0.11665	0.22037	1.0788	0	0.28018	-0.55937	-0.33837	-0.43518	-0.031496	-0.41626	-0.0063668	0.00027728	-0.46281	0.030873	0.0093413	-0.0020012	0.0036076	1.9614	-0.0094046	-0.24776	0.059223	0.28659	0.14087	0.50689	-0.19812	-0.15016	0.48975	0.10151	0.71453	0.78949	0.0033299	0.11386	0.05637	-0.024148	0.6753	0.29772	-0.20386	-0.021639	0.38485	-0.022881	-0.046202	-0.076545	0.43446	-0.01559	0.39878	-0.021235	-0.27846	-0.51043	0.058652	0.047552	-0.051609	-0.050776	-0.26925	0.39795	0.47306	0.0075	0.092895	-0.070269	
Amplification Peak 17 - CN values	16p11.2 	chr16:28605319-30334145(probes 1293933:1294011)  	chr16:29103032-29228592(probes 1293939:1293982)	chr16:28490518-30344970(probes 1293885:1294013)	0.04376	    0.04376		Actual Copy Change Given	-0.09512	-0.0037395	1.8538	-0.014968	0.13495	0.017824	0.038347	-0.25201	-0.0089906	0.02288	0.0087386	0.18967	0.078294	-0.022394	0.34796	0.039478	0.16986	0.99177	0.011539	0.084498	0.25574	0.028622	-0.016704	0.011261	-0.29603	0.02806	-0.028081	0.016146	0.018243	-0.072808	0.30291	0.0023581	-0.070269	1.3741	-0.38291	-0.019452	-0.045561	0.52328	0.037617	-0.0022339	-0.071472	-0.47839	-0.01282	-0.024448	0.037359	-0.41555	0.43193	0.20213	-0.16879	0.4932	1.3387	0.41731	-0.076412	-0.19149	0.0081959	0.20407	-0.25503	0	1.5903	0.18753	1.6843	0.020678	-0.080541	2.5018	0.055088	-0.030882	-0.021647	0	0.035497	0.52241	0.34258	-0.017515	0.020763	0	0.21407	-0.051451	-0.04428	0.82608	0.3746	-0.12577	0.77637	-0.76265	0.72225	-0.010232	0.25981	-0.64424	
Amplification Peak 18 - CN values	17q11.2 	chr17:27386448-27864389(probes 1332113:1332316)  	chr17:27687687-27813031(probes 1332259:1332298)	chr17:27388958-28479104(probes 1332114:1332567)	0.014768	    0.05794		Actual Copy Change Given	0.020903	0.0019418	0.30378	0.99626	0.25902	0.016425	0.018803	-0.17449	-0.026136	0.88708	0.59475	0.22887	0.54171	0.10973	-0.067418	0.1604	-0.30859	-0.027808	0.0013868	0.25449	0.56223	0.077574	-0.0084385	0.41396	-0.33825	-0.0023318	0.44816	0.23861	-0.0031859	0.13228	0.055595	-0.098155	0.26451	0.014051	-0.066654	0.41949	0.38204	2.5447	0.013911	-0.56196	3.6569	0.44935	-0.0098961	-0.037958	0.018933	0.023286	0.39678	0.41329	0	-0.28096	0.80617	-0.065581	0.36092	-0.14888	0.065226	0.2087	-0.26227	-0.033541	-0.021513	0.18995	-0.02384	0.034254	0.19649	0.14206	0.076986	6.8997e-05	0.47306	0.013772	0.29212	0.54524	-0.42112	-0.036115	0.011958	-0.02603	3.6569	-0.078934	-0.087712	0.11024	-0.068686	1.5697	0.24965	0.071678	0.80792	-0.046177	0.51926	0.82118	
Amplification Peak 19 - CN values	17q12   	chr17:37813857-37905815(probes 1336707:1336784)  	chr17:37891066-37904210(probes 1336783:1336783)	chr17:37623532-38173352(probes 1336633:1336892)	0.0011087	  0.0015275		Actual Copy Change Given	1.0866	0.0019418	0.30378	0.99626	0.25902	0.016425	0.018803	-0.48596	0.17211	0.88708	0.59475	0.22887	-0.0048461	0.10973	-0.067418	0.1604	0.11902	-0.59344	0.0013868	0.25449	0.56223	0.077574	-0.0084385	0.41396	-0.32205	0.0066653	0.44816	0.2523	-0.0031859	0.13228	0.055595	-0.098155	3.6569	0.014051	-0.066654	3.6569	3.6569	0.53081	0.013911	-0.011749	-0.020138	0.44935	-0.0098961	-0.037958	0.018933	0.023286	0.39297	0.3227	0	3.6569	-0.01037	-0.065581	0.36092	-0.14888	0.065226	0.2087	-0.26973	-0.033541	-0.021513	0.18995	-0.02384	0.034254	0.19649	0.14206	0.19938	6.8997e-05	0.0052749	0.013772	0.29212	0.54524	-0.021784	-0.036115	0.011958	-0.03975	0.066372	-0.054016	-0.087712	0.11024	-0.068686	-0.15171	-0.44687	0.071678	2.1867	0.5998	0.51926	0.82118	
Amplification Peak 20 - CN values	19q12   	chr19:30245583-30529931(probes 1411742:1411947)  	chr19:30478432-30526125(probes 1411922:1411944)	chr19:29215149-32985841(probes 1410914:1413663)	2.4183e-07	 2.4183e-07		Actual Copy Change Given	-0.079476	-0.014641	0.27127	0.42211	-0.0053992	0.013234	0.51682	0.90734	0.30362	-0.015326	-0.013815	-0.12926	-0.037626	-0.047659	0.967	1.0548	0.14117	2.0756	0.25449	3.6569	-0.24229	0.23225	0.46331	0.077718	0.32834	-0.020452	0.40494	0.33464	-0.0088526	-0.031632	1.0664	-0.012162	-0.18118	0.93834	1.952	-0.18823	0.4375	3.6569	0.017544	0.48572	-0.065179	3.6569	-0.015435	-0.014839	0.028903	0.76121	-0.052261	-0.032996	0.12741	2.9011	-0.034086	0.3687	-0.078544	-0.15499	-0.12671	-0.035632	-0.28168	0.06537	-0.047435	0.14548	0.78582	0.030029	-0.079875	-0.015741	-0.0083005	0.88716	-0.018353	0.0040831	-0.024824	0.49235	0.57558	-0.03039	0.013492	-0.088242	0.65295	-0.10395	-0.1246	0.41011	-0.072831	0.13051	2.873	0.011121	3.6569	-0.035176	0.59332	0.25386	
Amplification Peak 21 - CN values	20q11.21	chr20:30064458-31121563(probes 1442104:1442582)  	chr20:30110754-30270838(probes 1442127:1442191)	chr20:30072987-31128557(probes 1442105:1442584)	0.028443	   0.028443		Actual Copy Change Given	0.34096	-0.033132	0.39429	1.0479	0.44799	0.017824	0.47752	0.13569	-0.0098185	0.94754	0.63956	0.30188	0.13628	0.0056293	1.7727	0.24653	0.17362	-0.03054	0.00458	0.3048	0.50481	0.55347	1.035	0.18238	0.94466	0.02485	0.48918	0.45428	-0.0056361	0.42133	0.29001	0.29167	0.27986	0.67196	-0.39637	0.40427	1.4013	0.62661	0.035276	-0.0018014	0.88026	0.14801	0.00044728	0.0013254	0.027778	0.31322	0.42251	0.78446	0.16625	0.29692	0.63335	1.3297	0.43969	0.15472	0.17392	0.97956	0.028903	0.24997	2.9847	0.17166	0.13376	0.011121	0.076046	0.31433	0.30553	0.018733	0.18117	0.011539	1.154	0.54471	0.75223	0.53243	0.24517	-0.035993	0.27269	0.001803	-0.054555	0.063652	3.6569	0.32695	0.51037	0.757	0.73663	-0.017529	0.89247	1.8395	
Amplification Peak 22 - CN values	22q11.23	chr22:22281639-26820434(probes 1483886:1485517)  	chr22:25346762-25421569(probes 1484500:1484556)	chr22:22281655-26821417(probes 1483887:1485519)	0.014768	   0.014768		Actual Copy Change Given	0.16415	-0.0041546	3.6569	-0.047446	-0.20436	0.019643	-0.28287	0.037641	-0.018216	0.013787	0.0040243	-0.30614	-0.0076101	0.027294	-0.071331	0.24871	0.023145	-0.078278	0.19162	0.030732	-0.41718	-0.37335	0.96096	-0.0018014	-0.027398	0.024548	0.94119	-0.020549	0.0011093	-0.24582	-0.35823	-0.0019399	0.42553	-0.52847	-0.065716	-0.023977	0.49787	-0.60873	-0.05469	-0.036946	-0.048478	0.21637	-0.010477	-0.0079474	0.031999	-0.32112	-0.097495	-0.29957	-0.16841	0.71095	0.018383	-0.11482	-0.41794	1.0637	-0.36522	0.15263	-0.2732	0.10599	-0.6385	-0.29969	-0.17145	-0.65342	-0.28857	3.6569	0.15846	-0.0075414	-0.47723	0.011539	-0.0292	-0.083864	0.96678	0.036667	0.023286	-0.043059	0.20932	0.34681	-0.10329	3.1687	0.36179	0.48854	-0.57229	-0.83704	0.28881	-0.021235	-0.32124	0.6997	
Deletion Peak  1 - CN values	1p36.11 	chr1:1-117645743(probes 1:66136)                	chr1:26601386-26902880(probes 12580:12700)          	chr1:26639145-27119974(probes 12583:12760)          	0.089446	   0.088646		Actual Copy Change Given	-0.091287	-0.0024938	-0.034768	-0.0085943	-0.76158	0.010982	-0.29284	0.076279	0.069956	0.019098	0.00055459	0.23831	-0.19987	0.024766	-0.025023	0.19756	0.03369	0.43159	-0.0024938	-0.11939	0.18328	0.11418	-0.0022168	-0.30287	-0.33399	0.096234	-0.031709	-0.011749	0.020623	-0.41218	0.14631	0.15897	-0.71542	-0.53144	0.99634	0.0040243	-0.0078863	0.59027	0.028622	-0.0067813	-0.026653	-0.03899	-0.80491	-0.092669	0.01094	-0.006889	0.43176	-0.3024	-0.040101	0.47781	-0.0055368	0.15844	0.37545	0.13717	-0.11887	0	-0.26516	0.14087	0.0019418	-0.25443	0	0.028622	-0.46408	-0.055364	0.12409	0.081897	0.010842	0.021043	0.12444	-0.063703	0.0054139	-0.0010947	0.04954	-0.84058	-0.029783	-0.076012	-0.0034148	0.20183	-0.044845	0.28327	0.17422	0.025812	-0.093535	0.71528	0.042449	0.5713	
Deletion Peak  2 - CN values	2q22.1  	chr2:139655617-143637838(probes 201409:203839)	chr2:140976294-142894275(probes 202131:203402)    	chr2:141646698-142557129(probes 202510:203167)    	4.0754e-08	 4.2025e-07		Actual Copy Change Given	0.039054	-0.3527	0.33772	-0.00074514	-0.022195	-0.01106	0.2003	0.161	0.015866	-0.97783	0.001803	0.095234	-0.16967	-0.0079485	-1.0081	-0.11247	0.082267	-0.48963	0.30985	0.088837	-0.5794	-0.051316	-0.4505	0.044715	1.7911	0	-0.49287	-0.091023	0.0058309	-0.35019	-0.29738	0.02525	0.25371	-0.55857	-0.32484	0.02525	0.47015	-0.30557	-0.007472	-0.0077482	-0.031076	0.07369	-0.00076624	0	-0.0012473	-0.58263	-0.7489	0.15159	0.0025966	-0.0094046	-0.31517	0.057939	0	0.085799	0.0030522	-0.26203	-0.0056757	-0.075078	-0.4871	0.11946	-0.052126	-0.0021852	-0.11796	0.0031726	-0.03807	-0.0040857	-0.0096806	-0.98597	-0.091709	-0.00095081	-1.0841	-1.2463	0.0019418	-0.78732	-0.010508	0.040326	0.033267	0	0	-0.0049844	-0.34721	-0.041567	-0.5065	-0.0013858	0.11242	0.27036	
Deletion Peak  3 - CN values	2q34    	chr2:213401694-214143899(probes 242874:243376)	chr2:213789275-213792626(probes 243111:243112)    	chr2:213551095-214659585(probes 242976:243603)    	2.9364e-05	  0.0093461		Actual Copy Change Given	-0.058866	0.0084743	-0.89511	-0.042025	0.0052749	-0.01106	0.82236	-0.25394	0.015866	0.004873	-0.00055444	0.095234	-0.15119	-0.0079485	-0.46259	-0.11247	-0.36737	-1.0925	0.32141	0.089569	-0.5794	-0.051316	0.017544	0.05694	-0.28917	-0.0078863	-1.0472	-0.091023	0.0058309	-0.35019	-0.29738	0.02525	0.25371	-0.28035	0.039902	-0.42855	-0.046583	0.36477	-0.0076101	-0.0077482	-0.48208	-1.2929	0.014361	-0.0011701	-0.012377	-0.57259	-0.3051	-0.29087	0.0025966	0.053806	-0.33549	-0.52706	-0.3463	0.085799	0.0030522	-0.26646	-0.60022	-0.075078	-0.49216	0.14563	-0.052126	-0.11443	-0.74403	0.01433	-0.03807	-0.0040857	-0.49757	0	0.27786	0.015447	-0.37966	-0.011964	-0.4141	-0.79853	0	0.011818	0.03031	-0.031086	0	-0.0049844	-0.90548	-0.041567	0.078871	-0.011749	0.09638	-0.62493	
Deletion Peak  4 - CN values	2q37.1  	chr2:214143901-243199373(probes 243378:260551)	chr2:233604893-234686156(probes 255112:255712)    	chr2:215266520-243199373(probes 243943:260551)    	0.0010542	   0.036753		Actual Copy Change Given	-0.058866	0.0084743	-0.49099	-0.0098704	-0.00041585	-0.01106	-0.33329	-0.62912	0.015866	0.032578	-0.67177	0.095234	-0.15119	-0.0079485	-0.46259	-0.11247	-0.36737	-0.52624	0.27798	0.091445	-0.5794	-0.051316	-0.016429	-0.28549	-0.28917	-0.0078863	-0.50939	-0.14523	0.0058309	-0.35019	-0.29738	0.02525	-0.38134	-0.28035	-0.028218	-0.43962	-0.046583	0.36477	-0.0076101	-0.0077482	-0.5065	-0.36986	0.013384	-0.0011701	-1.0037	-0.59886	-0.3051	-0.022332	0.0025966	0.053806	-0.33549	-0.52706	-0.40538	0.085799	0.0030522	-0.26646	-0.60022	-0.16413	-0.49216	0.14563	-0.052126	-0.11443	-0.43669	0.01433	-0.03807	-0.0040857	-0.49726	0	0.27786	0.015447	-0.37966	0.0027886	-0.4141	-1.2929	0	0.011818	-0.065235	-0.044635	-0.066409	-0.0049844	-0.44631	-0.16942	0.078871	-0.011749	0.09638	-0.71892	
Deletion Peak  5 - CN values	3p21.31 	chr3:25755999-84920597(probes 274603:308889)    	chr3:48397047-48440177(probes 287680:287690)        	chr3:45987981-82823845(probes 286564:308001)        	0.025941	    0.16067		Actual Copy Change Given	-0.029311	0.21914	0.38731	-0.62963	-0.017941	-0.0049844	-0.31202	-0.035721	0.0030522	-0.013249	-0.0031859	-0.0053011	-0.7482	0.022031	-0.47447	-0.010922	-0.35965	0.45496	-0.013953	0.05466	-0.1679	-0.14571	0.011261	0.51374	-0.58686	0.00097064	0.9429	0.47025	0.0080567	0.46588	-0.19429	-0.29177	0.33318	-0.53388	0.34655	0.4168	-0.54714	0.015727	0	-0.55827	-0.0062097	0.32592	0.0032224	-0.0047767	-0.02035	0.33231	0.036935	-0.32147	0.069956	0.79046	0.027357	-0.0066159	-0.33209	0.1114	-0.31564	0.20786	0.016985	0.12992	0.0012481	-0.45319	-0.0027707	-0.67459	0.14221	-0.27691	0.05908	0.018237	-0.46664	-0.0040903	-0.0069454	1.165	-0.3847	-0.64816	0.0081959	-0.86287	0.13155	-0.52531	-0.8246	0.69447	-0.18032	0.0091583	-0.39764	0.013074	-0.037354	-0.039529	-0.5693	-0.66113	
Deletion Peak  6 - CN values	3p14.2  	chr3:1-198022430(probes 260552:366976)          	chr3:59702822-61238217(probes 293971:294172)        	chr3:45987981-82823845(probes 286564:308001)        	0.0043233	    0.72395		Actual Copy Change Given	-0.068797	0.21914	0.44833	-0.0037915	-0.017941	-0.0049844	0.03031	-0.035721	0.0030522	-0.013249	-0.0031859	-0.0053011	-0.7482	0.022031	-0.46727	-0.38347	-0.35965	-0.070804	-0.00027724	0.05466	-0.1679	-0.14571	0.011261	0.51374	-0.58686	0.00097064	0.9429	0.47025	0.0080567	0.47694	-0.19429	0.1595	-0.36714	-0.53388	0.34655	0.4168	-0.56616	0.015727	0	-0.55827	-0.0062097	0.32592	0.0032224	-0.0047767	-0.02035	0.33231	0.036935	-0.32147	-0.027593	0.79046	0.024689	0.45751	-0.2818	0.1114	-0.36022	-0.33491	0.016985	0.12992	0.0012481	-1.2929	-0.0027707	-0.67459	0.14221	-0.26973	0.05908	0.018237	-0.49319	-0.0040903	0.30378	1.165	-0.44161	-0.64816	0.0081959	0.012097	0.13155	-0.52512	-0.8246	-0.41608	-0.18032	0.0091583	-0.37865	0.013074	-0.037354	0.0034687	-0.56714	-0.66113	
Deletion Peak  7 - CN values	3p14.1  	chr3:40211012-88046665(probes 283305:310337)    	chr3:68032162-68596629(probes 299101:299507)        	chr3:45987981-82823845(probes 286564:308001)        	0.020403	    0.12578		Actual Copy Change Given	-0.068797	0.21914	0.44833	-0.0037915	-0.035087	-0.0049844	0.03031	-0.32437	0.0030522	-0.013249	-0.0031859	-0.0053011	-0.7482	0.022031	-0.46727	-0.38347	-0.35965	-0.070804	-0.00027724	0.05466	-0.24606	-0.14571	0.0013868	0.51374	3.6569	0.00097064	0.9429	0.47025	0.0080567	0.47694	-0.19429	0.1595	-0.36714	-0.56361	0.34655	0.4168	-0.56386	0.015727	0	-0.55827	-0.0062097	0.32592	0.0032224	0.0046574	-0.02035	0.33231	0.036935	-0.32147	-0.027593	1.5662	0.024689	0.021744	-0.82491	0.1114	-0.36022	0.21791	0.016985	0.12992	0.0012481	-0.48202	-0.0027707	-0.67459	0.14221	-0.26973	0.05908	0.018237	-0.49319	-0.0040903	0.30378	1.165	-0.37865	-0.645	-0.48418	0.012097	0.13155	0.11254	-0.8246	0.042449	-0.27678	0.0091583	-0.37865	0.013074	0.0023581	0.0034687	-0.56071	-0.63859	
Deletion Peak  8 - CN values	3p11.2  	chr3:1-198022430(probes 260552:366976)          	chr3:87247201-87328364(probes 310026:310056)        	chr3:86772336-87636244(probes 309773:310229)        	0.10817	    0.33256		Actual Copy Change Given	-0.068797	0.21914	0.44833	-0.011387	-0.021098	-0.0049844	0.11089	0.016565	0.0030522	-0.013249	-0.0031859	-0.0053011	-0.0039087	0.022031	-0.46727	-0.066252	0.19269	-0.051316	0.35692	0.05466	3.6569	-0.14571	0.0013868	0.67419	-0.28644	0.00097064	0.9429	0.47025	0.0080567	0.10687	-0.19429	0.1595	-0.36714	-1.0902	0.70082	-0.01849	0.99613	0.015727	0	-0.55827	-0.0062097	-0.47184	0.0043335	0.0046574	-0.0059522	0.33231	0.036935	-0.32147	2.9816	0.75547	0.45377	0.021744	-0.78074	0.1158	0.00073327	0.21791	0.016985	0.12992	0.0012481	-0.46674	-0.0027707	-0.67848	0.14221	-0.2624	0.05908	0.018237	-0.5151	-0.0040903	0.34044	1.2208	0.43733	-0.6294	-0.0067813	0.012097	0.13155	0.11254	-0.80219	0.042449	0.47492	0.051103	0.51054	0.013074	-0.54532	0.0034687	-1.2929	1.1824	
Deletion Peak  9 - CN values	4q22.1  	chr4:90844993-93240505(probes 416880:418037)    	chr4:91035787-92526033(probes 416927:417725)        	chr4:91380058-92054562(probes 417115:417528)        	5.7425e-06	 1.7413e-05		Actual Copy Change Given	0	-0.35931	-0.051323	-0.012848	-0.01849	-0.0094046	0	-0.072541	0.00458	-0.0077332	-0.0012473	-0.8693	-0.045841	-0.50011	-0.44291	-0.08094	0.079735	-0.05496	-0.34641	-0.16955	0.035947	-0.32461	-0.44782	-0.25467	-0.16365	-0.011335	0	-0.25376	0.0038854	-0.18144	-0.22471	-0.2781	-0.3668	0.36785	-0.3217	0.41991	0	-0.89235	-0.0049844	0.014609	-0.0037395	-0.18961	0.014501	0.0011866	-0.0026322	-0.17967	-0.3058	-0.26432	-0.068529	-0.15643	-0.28204	0.042166	-0.3282	-0.16408	-0.33214	0.081322	-0.5791	-0.056577	0.012329	-0.77439	-0.15893	-0.025483	0.0013868	-0.25406	-0.18961	-0.00906	-0.048633	0.0036076	0.31816	-0.053206	-0.37707	0.48597	-0.017803	-0.85662	-0.33087	-0.46334	-0.79494	0.089416	-0.045384	-0.40152	0.34275	0	0.022024	0.0022758	-0.49569	0.017684	
Deletion Peak 10 - CN values	4q31.21 	chr4:90804644-191154276(probes 416851:469765)  	chr4:142947547-143771324(probes 445306:445845)    	chr4:143321910-143327731(probes 445576:445577)    	0.088002	    0.16562		Actual Copy Change Given	0	0	0.29104	-0.0025909	-0.01849	-0.0094046	-0.016154	-0.71131	0.00458	-0.013112	-0.0012473	-0.24276	-0.045841	-0.0086387	-0.42799	-0.08094	0.079735	-0.05496	-0.33653	-0.16357	-0.065179	-0.32461	0.37199	-0.248	-0.11652	-0.011335	0	-0.25376	-0.0015243	-0.18144	-0.22471	-0.2781	-0.3668	0.23457	-0.31972	0.00097064	0	-0.41443	-0.0049844	0.014609	-0.0037395	-0.51938	0.71607	0.0011866	-0.32426	-0.17967	-0.35761	0.4789	-0.068529	-0.17208	-0.66476	-0.50308	-0.32495	-0.22367	0.14191	0.081322	-0.56922	-0.056577	0.050392	0.016425	-0.15055	-0.027535	0.0013868	-0.25406	1.4824	-0.00906	-0.048633	0.0036076	-0.42235	-0.038306	-0.37707	-0.0042789	-0.020275	-0.8609	0.021323	0.049682	-0.79553	-0.33929	-0.023452	-0.38951	-0.34481	0	-0.0016629	0.0037465	-0.51373	0	
Deletion Peak 11 - CN values	5q11.2  	chr5:58260298-59787985(probes 500855:501799)    	chr5:58260298-59787985(probes 500855:501799)        	chr5:50124857-78425187(probes 495714:511683)        	6.6605e-09	 6.6605e-09		Actual Copy Change Given	-0.37223	-0.028628	-0.032587	0.45881	-0.1586	-0.0038779	-0.32646	-0.41236	0.010285	0.90595	-0.0070576	-0.27638	-0.55597	-0.0083065	-0.44878	-0.15311	-0.057924	-1.1714	-0.37344	-0.19036	0.00013863	0.094637	-0.42901	-0.20685	-0.37245	0.00041877	0.51856	-0.56147	-0.8167	-0.0022168	-0.010707	-0.040646	-0.03885	0.49078	0.0081959	-0.43799	-0.0062349	-1.0149	0.0012096	0.012376	0.46144	-0.45018	-0.0006617	-0.0034995	0	0.043299	-0.40584	-0.0099565	-0.15388	-0.18131	-0.72057	-0.22711	-0.3424	-0.42068	-0.35282	-0.2787	-0.26276	-0.14884	-0.59857	-0.33075	-0.044144	-0.0040162	-0.27236	-0.13316	0	0.060865	-0.47512	-0.01354	0.001777	0.54894	-0.85678	-0.0022028	-0.017197	-0.86767	-0.0089599	0.034536	-0.81211	0.055373	0.44967	-0.41377	-0.35544	-0.85027	-0.0018014	0	-0.58849	-0.61892	
Deletion Peak 12 - CN values	6p25.3  	chr6:1-4026921(probes 570314:572561)              	chr6:1309651-1315945(probes 570616:570618)            	chr6:1-1877957(probes 570314:571014)                  	0.042133	   0.042571		Actual Copy Change Given	0	-0.0040162	-0.042381	0	0.13835	-0.0029091	0.071035	0.79511	0	-0.0078713	-0.0069195	-0.03557	0.0034687	0.071967	-0.56345	0.18344	-0.36374	-1.2566	-0.35681	-0.18345	-0.017391	0	0.00027728	-0.096572	0.078438	0.015028	-0.024251	-0.25249	0.012934	0.064368	0.36388	-0.0019399	-0.73363	-0.028765	0.31113	0.42402	-0.54371	0.52766	0.0034687	-0.56416	-0.50525	-0.069466	-0.97187	-0.0191	-0.011335	-0.29367	-0.94313	-0.30698	-0.1803	0.31771	0.084787	-0.57794	0.22947	0	0.015512	0.2196	-0.29201	-0.051451	0	0.0098669	0.24249	-0.68579	0.086811	-0.31821	-0.13186	0.043794	0.48785	0.001803	-0.40165	0.55319	0.090141	0.0075141	-0.011335	0.0077783	-0.19432	0.0097276	0.06989	0.0077783	-0.037649	0.34342	0.56276	0.010285	-0.60419	-0.017666	-0.23386	0.92432	
Deletion Peak 13 - CN values	6q22.31 	chr6:92230434-122757952(probes 620965:637814)  	chr6:119497524-119674502(probes 635993:636104)    	chr6:105959607-122527365(probes 628226:637691)    	0.0014245	  0.0014245		Actual Copy Change Given	-0.029175	-0.0040162	-0.0051227	0.0064739	0.15069	-0.011335	-0.34412	-0.17348	0	-0.0078713	-0.0069195	-0.040465	-0.90107	0.074775	-0.42144	0.0114	-0.020687	0.50759	-0.35681	-0.18332	0.024408	-0.12824	-0.014641	-0.23728	0.10337	-0.0047079	-0.019314	-0.24265	-0.014366	-0.36997	-0.0061516	-0.0019399	0.4081	-0.066595	-0.35931	0.0011093	-0.55407	-0.35385	-0.0041546	-0.56416	0.42721	-0.047289	0.0069749	-0.0191	-0.011335	-0.29236	-0.40738	-0.16332	-0.15242	0.37199	-0.20983	-0.51414	0.5959	0	-0.35909	-0.81162	-0.28788	0.001803	-0.025686	-0.83381	0.047078	-0.0095426	-0.36113	0.025671	-0.059135	0.012939	-0.015466	0.001803	-0.41203	-0.071309	0.038489	-0.65946	-0.014503	0.018243	-0.17132	-0.51897	0.096089	-0.16675	-0.23425	0.39795	-0.92979	-0.53531	-0.53622	0.0052749	-0.95116	-0.98125	
Deletion Peak 14 - CN values	8p23.1  	chr8:1-39792913(probes 748205:770960)             	chr8:12577793-12585729(probes 753292:753293)        	chr8:12562456-13222153(probes 753285:753811)        	0.10817	    0.10817		Actual Copy Change Given	-0.3342	0.0041632	-0.47955	0.58661	-0.044144	0.0024969	-0.30968	1.1193	-0.0095056	-0.052382	0.010381	-0.064628	-0.040616	0.0028508	-0.5011	-0.6295	-0.029175	0.22499	-0.2233	0.62351	-0.65501	-0.58735	0.48354	0.03121	-0.44692	-0.18584	0.0059503	0.39828	-0.015604	-0.87064	-0.32767	-0.033814	-0.7317	-0.55667	-0.34813	-0.45083	-0.074112	-1.0317	0.024548	0.012795	-1.0066	-0.96681	-0.0074878	0.0041755	-0.2818	-0.28096	-0.43355	0.060651	-0.40628	-0.52685	-0.72906	-1.1082	-0.80609	-0.44652	-0.37302	0.23628	-0.62939	-0.10616	-0.56545	0.16325	-0.048342	-0.45404	-0.64809	-0.67141	-0.19812	0.038072	-0.54118	-0.0044312	-0.40994	-0.093564	-0.8679	0.00084598	-0.44814	0.035947	-0.033375	0.41094	-0.029141	-0.62868	0.66158	-0.91274	0.10235	-0.89921	-0.57658	-0.0059522	-0.97345	0.51664	
Deletion Peak 15 - CN values	9p23    	chr9:1-21008376(probes 829783:842634)             	chr9:8310705-10619051(probes 834328:835662)          	chr9:9216981-9221296(probes 834996:834997)            	0.0036188	    0.12578		Actual Copy Change Given	-0.45265	0.0070826	-0.017254	0.67245	0.45513	-0.49235	-0.31272	-0.61518	-0.0023553	-0.0060754	-0.67866	0.014764	-0.7317	-0.00020103	0.3615	-0.58127	-0.10145	-0.55897	-0.35259	-0.029448	-0.015879	-0.34687	-0.032723	-0.29969	-0.084882	-0.90692	-0.54263	-0.54875	-0.90851	-0.38515	0.091236	-0.21156	0.26624	-0.55697	-0.71301	0.10322	-0.010784	-0.057924	-0.9478	-0.55518	0.89356	0.30889	-0.0035698	-0.14752	-0.98139	0.01395	-0.40804	0.044726	0.27594	0.37051	-0.68187	-0.03749	0.1283	-0.4209	-0.3685	-0.81786	-0.26817	0.017963	-0.0029091	-0.34217	0.1498	-0.48029	-0.42789	0.57758	0.19238	-0.041363	0.73908	-0.04354	-0.047691	-0.067726	0.90774	-0.8088	-0.014916	0.016006	-0.33456	-0.0033243	-0.84115	0.056798	0.60626	0.64467	-0.3941	0.019923	2.7158	0.001803	-0.26997	-0.59351	
Deletion Peak 16 - CN values	9p21.3  	chr9:21865498-22448737(probes 843222:843585)    	chr9:21959052-21997722(probes 843272:843285)        	chr9:20057788-24075081(probes 841943:844665)        	5.9073e-47	  1.357e-45		Actual Copy Change Given	-0.45832	-0.70684	-1.2929	0.15168	-0.94034	-0.96953	-0.99437	-0.63624	-0.0023553	-1.2929	-1.2929	0.014764	-1.2929	-0.96038	-0.45917	-0.58127	-0.85536	-0.029857	-0.35076	-0.029448	-0.015879	-0.34687	-1.2929	-0.94371	-0.084882	-1.2929	-0.54263	-1.2929	-1.2929	-0.38515	0.21477	-0.21156	0.26624	-1.2929	-0.71301	-1.2929	-0.010784	-0.057924	-1.2929	-0.54613	0.87919	0.30889	-1.2929	-0.14752	-1.2929	0.01395	-1.2929	0.044726	-0.098418	0.37051	-0.68187	-0.03749	0.1283	-0.4209	-0.725	-0.8195	-0.56565	0.017963	0.0070826	-1.2929	0.1498	-0.0056757	-1.2929	0.53186	-0.018453	-0.041363	0.79646	-1.2929	-1.0939	-0.067726	-0.90076	0.6109	-0.0037395	0.030591	-0.33456	-0.021647	-0.84115	-0.77116	0.60626	0.64467	-0.93836	0.019923	0.87173	0.001803	-1.2929	-0.59351	
Deletion Peak 17 - CN values	9q22.33 	chr9:101016723-101979393(probes 873199:873937)	chr9:101864709-101918083(probes 873871:873906)    	chr9:101903956-101907671(probes 873889:873890)    	0.113	    0.11097		Actual Copy Change Given	0.35428	0.0029133	0.31514	0.0070303	-0.20074	0.0058309	0.011958	-0.43517	-0.0023553	-0.9607	-0.66938	0.0034047	-1.2401	-0.0014482	0.0039567	0	-0.09728	0.43446	-0.35829	-0.19988	-0.011749	0.48251	-0.41827	-0.36193	0.10642	-0.89985	-0.53835	-0.53042	-0.88465	0.22623	0.21477	-0.21156	0.0057238	-0.53956	-0.045	-0.44264	-0.52082	0.30074	-0.93008	0	0.40044	-0.44663	-0.0061974	-0.14752	-0.97184	0.019503	0.38882	-0.073476	-0.098418	0.099288	-0.030404	-0.03749	0.80022	0.13081	-0.35931	-0.8154	-0.56664	0.017963	0.0070826	-0.81458	0.1498	0.6605	-0.43724	-0.29591	-0.090493	-0.041363	0.047584	-0.0053513	-0.021673	-0.067726	-0.0015243	0.6109	-0.94627	-0.85702	-0.35968	-0.021647	0	-0.59967	0.41728	-0.48018	-0.39953	0.019923	0.0025524	0.001803	0.27038	-0.61374	
Deletion Peak 18 - CN values	10q23.31	chr10:89617158-91063177(probes 950039:951117)  	chr10:89617402-89735596(probes 950040:950228)      	chr10:89560539-89701031(probes 950008:950155)      	0.0032676	  0.0032676		Actual Copy Change Given	-0.13057	-0.0018014	-0.089814	-0.0054214	0.11829	0.009459	0.010424	-0.13031	-0.0076101	0.016441	0.0052749	-0.28059	0.0016642	-0.21038	-0.46408	-0.14348	0	-0.064777	0	-0.38346	-0.03749	-0.40418	-0.89649	0.015436	0.012934	-0.14875	0.50299	0.0015255	-0.04428	0.093538	0	-0.13173	-0.0027707	-1.2929	0.55372	-0.43994	0.49909	-0.51032	0.013492	-0.0089906	-0.0027707	-0.43789	0.0022507	0.017342	-0.036309	-0.28201	0	-0.28497	0.073977	-0.21193	-0.31427	-0.54047	-0.36861	-0.13652	0.0044411	-0.23948	0.020345	-0.056981	-0.52317	-0.58461	-0.054286	0.0056919	0.71058	-0.31272	-0.081339	-0.020258	-0.49078	0.0091705	-0.018791	1.1795	0.19497	-0.0081485	-0.4342	-0.85011	-0.028901	-0.011887	-0.12636	-0.22625	-0.057139	-0.03749	-0.38672	-0.83928	-0.58022	-0.010188	-0.56505	0.57809	
Deletion Peak 19 - CN values	11q13.4 	chr11:1-135006516(probes 978737:1056021)        	chr11:6513597-128815336(probes 981575:1052770)     	chr11:6530139-6533230(probes 981585:981586)          	0.07006	   0.070635		Actual Copy Change Given	-0.19575	-0.00055444	0.80228	-0.024602	0	0.0055529	-0.051451	0.19208	-0.0048461	0.00084698	-0.010422	0.018538	0.0080567	0	-0.49642	0.4977	0.060079	0.43226	0.0051359	0	-0.30204	0.008743	0.12504	0	-0.39489	0.013353	-0.53236	-0.48481	-0.043195	0.0012481	0.32695	0.12505	0.3285	-0.53388	0.30186	0.010006	0.48354	-0.13005	0.0056919	-0.55957	-0.48921	0.038913	-0.0034315	0.018881	0.00027728	0.017264	0.42099	0.24934	-0.019177	0.12196	0.025812	0.59138	1.2393	-0.41564	-0.12642	-0.31926	-0.0015243	0.017391	-0.0023553	0.14741	0.059866	-0.0062286	1.096	0.27143	-0.13018	-0.012783	0.013492	-0.0032837	0.25056	-0.088785	-0.0059424	0.0012621	0.0012481	-0.015604	-0.070536	2.3542	-0.84427	0.65314	0.42006	0.43243	0.54431	0.0019418	0.43142	0.64965	0.96637	0.21545	
Deletion Peak 20 - CN values	12p13.2 	chr12:3980957-24365820(probes 1057531:1069718)  	chr12:11477352-11718581(probes 1061592:1061705)    	chr12:11477536-11582896(probes 1061593:1061594)    	0.12958	    0.13163		Actual Copy Change Given	0.30161	0.0048579	-0.041295	0.59649	0.052952	-0.0020784	0.45683	0.83098	0.012097	-0.020123	0.075753	0.20456	-0.010232	-0.0031098	1.3352	-0.0091286	0.18677	-1.2929	0.21085	0.63207	-0.033814	0.17799	-0.0066432	0.045141	0.04883	-0.91823	-0.016567	0.28533	0.78254	-0.87197	0.33846	0.12299	0.52101	0.49632	-0.061823	0.013772	0.46519	-0.077478	0.0016642	0.0043021	-0.489	-0.0088526	0.0040557	0.0022236	-0.0051227	0.056513	0.04259	-0.0036011	0.058367	-0.012576	0.0058309	-0.55647	0.58883	-0.11626	0.024829	0.22222	0.012934	-0.013264	-0.10289	-0.27834	0.20503	0.00458	0.063878	0.68403	-0.0078863	0.034465	0.0038854	-0.0022168	0.54715	-0.043195	-0.0067813	0.00056862	-0.016017	0.065656	0.30113	0.0094491	0.041741	0.04954	0.43493	-0.49016	-0.9505	-0.017529	0.45122	-0.010646	-0.037626	1.3187	
Deletion Peak 21 - CN values	13q14.2 	chr13:45382430-50471178(probes 1146387:1149612)	chr13:48984816-48992809(probes 1148762:1148772)    	chr13:37870521-62943883(probes 1141487:1155355)    	1.1701e-06	 1.1701e-06		Actual Copy Change Given	-0.0067813	0.0079175	-0.45191	-0.66628	0.73189	-0.0074777	0.12874	-0.47131	-0.0036011	-0.0030714	0.62224	-0.38155	-0.43257	0.10841	-0.41508	-0.079742	-0.34618	-0.44113	-0.014916	0.34258	-1.2898	-0.39252	-0.017803	0.034298	-1.2124	-0.0069195	0.012062	0.4424	-0.0018387	0.17437	0.3117	0	0.29167	-0.017254	-0.33837	0.0012698	-0.023253	-0.44678	-0.0063668	0.00027728	-0.46281	-0.45469	-0.80549	-0.0020012	0.0036076	-0.31721	-0.0094046	-0.24776	-0.52747	-0.74455	-0.30721	0.50689	-0.19812	-0.24081	-0.33906	0.091735	0.00097064	0.78949	-0.65892	-0.82635	-0.26973	-0.024148	-0.22773	-0.32193	-0.21404	-0.032246	-1.0015	-0.022881	-0.034929	1.1793	0.10016	-0.01559	0.39878	-0.020055	-0.27846	-0.51043	0.058652	0.047552	-0.051609	-0.050776	-0.92369	-0.4119	0.43407	0.0075	0.092895	-0.62054	
Deletion Peak 22 - CN values	14q32.32	chr14:1-107349540(probes 1186671:1236138)     	chr14:102823875-104331556(probes 1234969:1235691)	chr14:102885225-102959276(probes 1234991:1235033)	0.24602	    0.24257		Actual Copy Change Given	-0.47533	0.0072217	0.078282	-0.0019919	0.12432	0.008663	-0.29745	-0.060345	-0.0036011	0.0075151	-0.0036011	-0.006925	-0.74316	-0.0017252	0.065092	-0.35704	-0.013815	-0.038463	-0.37155	-0.45725	0.35692	0.29899	0.741	-0.2429	0.3235	0.0095883	-0.074199	0	0.013353	-0.40639	0.56268	-0.13251	-0.36136	-0.0076101	-0.38675	-0.43913	0.51594	-0.070269	0.017124	0.0024299	-0.21404	0.37183	-0.0013545	0.00035455	0.0093098	-0.0035777	-0.37369	-0.0036011	-0.085146	-0.40782	0.10891	-0.019588	-0.031086	0.099975	-0.21676	0.12152	0.27852	-0.016292	-0.0017783	0.18959	0.13598	0.016705	0.089127	-0.32554	0.21715	-0.0069889	0.44003	0.76197	-0.019752	-0.046989	-0.39597	0.0011234	-0.0044312	0.31225	0.24004	-0.026416	0.00013863	-0.17866	0.41879	0.29192	0.083487	-0.10303	-1.1974	-0.032041	-0.67671	-0.31307	
Deletion Peak 23 - CN values	15q13.1 	chr15:1-32934882(probes 1236139:1239382)       	chr15:28097279-31135788(probes 1238812:1238826)    	chr15:1-32934882(probes 1236139:1239382)           	0.0050497	  0.0051122		Actual Copy Change Given	-0.13665	0.0095011	-0.09089	-0.022521	-0.2093	0.019223	-0.28679	-0.50441	-0.0038779	0.024283	-0.0015243	-0.021906	0.010842	0.020246	-0.010914	-0.22145	-0.3488	-0.015879	-0.35122	-0.20486	-0.65501	-0.64715	0.21717	0.03369	0.04741	0.017029	-0.024935	-0.0034627	0.18328	-0.015452	-0.039205	0.018717	-0.35647	-0.0091286	-0.0008316	0.40577	-0.54673	-0.50411	0.024548	-0.0026322	0.45165	-0.45576	-0.00080028	0.0024354	0.021043	-0.3051	0.019363	-0.24314	-0.13846	0.27742	-0.014641	-0.052126	-0.38884	-0.35846	-0.054151	0.21299	0.0083351	-0.011335	-0.039937	-0.3112	-0.1712	0.0073609	0	0	-0.060076	-0.025004	-0.57021	0.0030522	-0.39955	-0.062629	-0.42112	-0.0028951	0.038347	-0.86704	0.27237	-0.016567	-0.017391	-0.83583	0.40158	-0.052396	-0.46281	-0.83777	0.39695	0.0020805	-0.95021	-0.11848	
Deletion Peak 24 - CN values	16p13.3 	chr16:3029029-4013466(probes 1281311:1281746)    	chr16:3773626-3933344(probes 1281600:1281702)        	chr16:1-5248571(probes 1280689:1282370)               	7.6082e-05	 7.6135e-05		Actual Copy Change Given	-0.09512	-0.0037395	-0.50121	-0.079308	-0.39174	0.019083	0.038347	-0.25201	-0.012989	0.02288	-0.01037	-0.36021	0.078294	-0.022394	0.40845	-0.28679	0.16986	-0.62789	-0.36227	0.084498	0.25574	0.028622	-0.80136	0.011261	-0.31972	0.02806	-0.028081	0.016146	0.018243	-0.072808	-0.32419	0.0023581	0.25105	-0.51671	-0.38291	-0.019452	-0.029038	-0.65836	0.037617	-0.0022339	0.044007	-0.027671	-0.01282	-0.024448	0.037359	-0.41555	-0.072007	0.20213	-0.16879	-0.56376	-0.35931	0.41731	-0.48712	-0.44405	0.0081959	0.20407	-0.25503	0	-0.55727	0.18753	-0.13355	0.020678	-0.080541	-0.21354	0.055088	-0.030882	-0.022332	0.030873	-0.049855	0.52241	-0.45276	-0.017515	0.020763	-0.88758	0.21407	-0.090396	-0.04428	-0.59458	0.3746	-0.61296	-0.48123	-0.76265	-0.15924	-0.022606	-1.0703	-0.71248	
Deletion Peak 25 - CN values	16q23.1 	chr16:78129058-79627770(probes 1313916:1315281)	chr16:78129058-79247026(probes 1313916:1314929)    	chr16:78583258-78586506(probes 1314423:1314424)    	0.088002	   0.086273		Actual Copy Change Given	-0.10066	-0.0037395	0.70389	0.078384	0.13495	0.017824	0.048688	0.56045	-0.022469	0.027676	0.0087386	0.27302	0.078294	-0.022394	0.55674	-0.011749	0.16986	0.49009	0.011539	0.084498	0.32527	0.028622	-0.016704	0.011261	0.30809	0.02806	-0.028081	0.016146	0.018243	-0.072808	-0.34704	0.0023581	-0.070269	0.31822	-0.36148	0.38849	-0.021647	-0.063838	0.024408	0.0077783	-0.4959	-0.066788	-0.022301	-0.024448	0.025985	-0.39363	-0.43311	-0.35647	-0.16879	-0.17069	-0.015054	0.41731	0.31289	-0.19149	0.00458	0.26059	0.58411	-0.01354	-0.55707	0.18026	0.10701	0.020678	-0.15515	-0.03565	0.042158	-0.030882	-0.52113	0	-0.078941	0.52241	-0.22392	-0.37908	0.020763	0	0.24778	-0.04577	-0.04428	-0.51455	0.3746	1.6258	0.23907	-0.67438	-0.59468	-0.019022	-0.63793	-0.65761	
Deletion Peak 26 - CN values	17p12   	chr17:14131834-15999789(probes 1328971:1329115)	chr17:15583978-15695417(probes 1328981:1328987)    	chr17:15557741-17326362(probes 1328973:1329712)    	0.00011404	 0.00011949		Actual Copy Change Given	-0.24423	0.0019418	-0.12862	0.99626	0.25902	0.016425	-0.29721	-0.50453	-0.026136	-0.98152	-0.65919	0.22887	-0.74942	0.10973	-0.067418	0.1604	-0.30859	-0.62903	-0.37686	0.25449	-0.10605	-0.37268	-0.0084385	-0.5427	-0.29248	-0.90076	0.44816	-0.89695	-0.0031859	-0.44997	0.055595	-0.098155	0.26451	-0.54643	-0.072942	-0.46961	-0.58598	-0.99256	0.013911	-0.56196	-0.51074	-0.97708	-0.0098961	-0.037958	0.018933	-0.30733	-0.4564	-0.029311	0	-0.28096	-0.11312	-0.6069	1.7099	-0.14888	-0.36147	-0.84571	-0.59361	-0.033541	-0.64765	-1.2929	-0.02384	-0.66003	-1.2929	1.0907	0.076986	6.8997e-05	-0.023768	0.013772	-0.42769	0.54524	-0.4661	-0.67112	0.011958	-0.9147	-0.41322	-0.070269	-0.087712	-0.52667	-0.068686	-0.58941	0.24965	0.071678	-0.61066	-0.033269	-1.2929	-0.70217	
Deletion Peak 27 - CN values	19p13.3 	chr19:1-9203991(probes 1401192:1404023)           	chr19:1-462697(probes 1401192:1401232)                 	chr19:1-9081766(probes 1401192:1403965)               	0.013136	   0.013317		Actual Copy Change Given	-0.01106	-0.010232	0.25008	0.40571	-0.0053992	0.011818	-0.22773	0.11081	-0.035585	-0.041071	-0.013815	-0.12926	-0.16528	-0.0025561	-0.44867	-0.29236	0.14117	0.36068	-0.35829	-0.29863	-0.27523	0.23225	-0.22256	-0.34096	-0.64509	-0.020452	0.40494	-0.23997	-0.0088526	-0.031632	-0.086179	-0.012162	0.40928	-0.0051227	0.19345	-0.18823	-0.088374	-0.28909	0.017544	-0.55707	-0.065179	-0.20622	-0.015435	-0.014839	0.028903	-0.10171	-0.052261	-0.032996	0.12741	-0.29863	-0.034086	-0.59876	-0.078544	-0.13044	-0.12671	-0.035632	-0.25552	0.06537	-0.63292	-0.81484	0.055515	-0.62874	-0.079875	-0.34549	-0.0083005	-0.030336	-0.018353	0.0040831	-0.024824	0.54594	-0.44986	-0.03039	0.013492	-0.088242	0.041741	-0.13277	-0.93504	-0.17069	-0.072831	0.029501	-0.5065	-0.65761	-0.64095	-0.10749	-0.37042	0.086522	
Deletion Peak 28 - CN values	22q13.32	chr22:34146369-51304566(probes 1490564:1499980)	chr22:49174995-49176650(probes 1499901:1499902)    	chr22:49091880-49288584(probes 1499799:1499949)    	0.14542	    0.14542		Actual Copy Change Given	0.12329	-0.0041546	-0.5975	-0.056089	0.1348	0.017264	-0.30287	0.037641	-0.018216	0.00056963	-0.010412	-0.30614	-0.0059522	0.021931	-1.0594	-0.33883	0.023145	-0.078278	0.18714	0.030732	-0.42287	-0.37335	-0.38996	-0.0018014	-0.027398	0.024548	0.49407	-0.020549	0.0011093	-0.22982	-0.35823	-0.0019399	-0.00027724	0.040892	-0.091498	-0.020687	0.49787	-0.6367	-0.05469	-0.036946	-0.51969	0.21637	-0.010477	-0.0079474	0.031999	-0.32112	-0.097495	-0.30604	-0.16841	0.71095	0.018383	-0.11482	-0.18335	-0.46291	-0.35918	0.15263	-0.27404	0.10599	-0.029175	-0.29969	-0.19954	-0.67491	-0.28857	-0.77609	0.15846	-0.0075414	-0.47723	0.011539	-0.37597	-0.083864	-0.46977	0.033846	0.023286	-0.043059	0.20932	0.34827	-0.116	-0.40392	0.36179	-0.17246	-0.078943	-0.83704	0.27963	-0.055634	-0.32124	0.64598	
Deletion Peak 29 - CN values	Xq23    	chrX:77910652-128658341(probes 1529373:1552298)	chrX:110361510-110469654(probes 1543520:1543583)  	chrX:110406757-110413449(probes 1543552:1543553)  	0.086273	   0.086273		Actual Copy Change Given	-0.0085394	0.012795	0.33205	0.24679	0.10278	0.031718	0.017124	-0.61141	0.034113	0.32529	0.13509	0.0082113	-0.14065	-0.0013096	0.46571	0.026514	-0.054286	0.048972	-0.40085	-0.0038779	0.013074	-0.0070576	-0.67279	-0.046718	-0.16974	-0.14348	0.03214	0.42133	-0.096044	-0.085912	0.27893	5.9647e-05	0.031155	0.0019418	0.024116	0.17498	0.12358	-0.038034	-0.065179	-0.13109	-0.28703	-0.037483	0.1033	-0.014014	-0.053746	-0.091149	0.04883	-0.028355	0.011539	0.16325	-0.038986	-0.012438	-0.0123	-0.035993	-0.074077	-0.10516	-0.11299	0.073839	-1.2929	-0.17803	0.027357	-0.13561	-0.075878	0.37216	0.058081	0.0099363	-0.0047593	0.039619	0.14192	-0.1329	0.041883	0.028074	0.019088	-0.20809	0.046245	-0.017905	-0.1444	-0.06768	0.14828	0.167	0.49199	-0.14618	0.11776	0.0042043	-0.11155	-0.7674	
