Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
ClinicalAnalysisAllGenes_new1.data.file	PANCANCER.mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.data.txt	gdac.broadinstitute.org_PANCANCER.Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.Level_3.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	PANCANCER.clin.merged.picked.clindata.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.data.file	PANCANCER.mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.data.txt	gdac.broadinstitute.org_PANCANCER.Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.Level_3.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	table10.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.data.file	PANCANCER.mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.data.txt	gdac.broadinstitute.org_PANCANCER.Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.Level_3.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	table4.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.data.file	PANCANCER.mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.data.txt	gdac.broadinstitute.org_PANCANCER.Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.Level_3.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	table6.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.data.file	PANCANCER.mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.data.txt	gdac.broadinstitute.org_PANCANCER.Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.Level_3.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	table1.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.data.file	PANCANCER.mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.data.txt	gdac.broadinstitute.org_PANCANCER.Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.Level_3.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	supp.table1.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.data.file	PANCANCER.mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.data.txt	gdac.broadinstitute.org_PANCANCER.Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.Level_3.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	V3ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.data.file	PANCANCER.mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.data.txt	gdac.broadinstitute.org_PANCANCER.Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.Level_3.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	V6ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.data.file	PANCANCER.mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.data.txt	gdac.broadinstitute.org_PANCANCER.Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.Level_3.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	V2ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.data.file	PANCANCER.mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.data.txt	gdac.broadinstitute.org_PANCANCER.Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.Level_3.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.data.file	PANCANCER.mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.data.txt	gdac.broadinstitute.org_PANCANCER.Merge_mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data.Level_3.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.clinical.file	PANCANCER.clin.merged.picked.txt	gdac.broadinstitute.org_PANCANCER.Clinical_Pick_Tier1.Level_4.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	PANCANCER.clin.merged.picked.clindata.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.clinical.file	PANCANCER.clin.merged.picked.txt	gdac.broadinstitute.org_PANCANCER.Clinical_Pick_Tier1.Level_4.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	table10.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.clinical.file	PANCANCER.clin.merged.picked.txt	gdac.broadinstitute.org_PANCANCER.Clinical_Pick_Tier1.Level_4.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	table4.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.clinical.file	PANCANCER.clin.merged.picked.txt	gdac.broadinstitute.org_PANCANCER.Clinical_Pick_Tier1.Level_4.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	table6.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.clinical.file	PANCANCER.clin.merged.picked.txt	gdac.broadinstitute.org_PANCANCER.Clinical_Pick_Tier1.Level_4.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	table1.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.clinical.file	PANCANCER.clin.merged.picked.txt	gdac.broadinstitute.org_PANCANCER.Clinical_Pick_Tier1.Level_4.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	supp.table1.txt	clinical_Correlation-Clinical_Expression	Level_4	text	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.clinical.file	PANCANCER.clin.merged.picked.txt	gdac.broadinstitute.org_PANCANCER.Clinical_Pick_Tier1.Level_4.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	V3ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.clinical.file	PANCANCER.clin.merged.picked.txt	gdac.broadinstitute.org_PANCANCER.Clinical_Pick_Tier1.Level_4.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	V6ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.clinical.file	PANCANCER.clin.merged.picked.txt	gdac.broadinstitute.org_PANCANCER.Clinical_Pick_Tier1.Level_4.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	V2ex.png	clinical_Correlation-Clinical_Expression	Level_4	png	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.clinical.file	PANCANCER.clin.merged.picked.txt	gdac.broadinstitute.org_PANCANCER.Clinical_Pick_Tier1.Level_4.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
ClinicalAnalysisAllGenes_new1.clinical.file	PANCANCER.clin.merged.picked.txt	gdac.broadinstitute.org_PANCANCER.Clinical_Pick_Tier1.Level_4.2012082500.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00337:25	Correlate_Clinical_vs_miR_2012082500	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_PANCANCER.Correlate_Clinical_vs_miR.Level_4.2012082500.0.0	yes
