Clinical Features Time to Death AGE GENDER KARNOFSKY.PERFORMANCE.SCORE HISTOLOGICAL.TYPE PATHOLOGY.T PATHOLOGY.N PATHOLOGICSPREAD(M) TUMOR.STAGE RADIATIONS.RADIATION.REGIMENINDICATION NEOADJUVANT.THERAPY nCNV (%) nWild-Type logrank test_P logrank test_Q t-test_P t-test_Q Fisher's exact test_P Fisher's exact test_Q t-test_P t-test_Q Chi-square test_P Chi-square test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Amp Peak 1(1p34.3) 82 (29%) 203 0.95031 1 0.0015901 1 1 1 0.49771 1 0.18365 1 0.88426 1 0.39476 1 0.47778 1 0.82387 1 0.76323 1 0.85554 1 Amp Peak 2(1p22.3) 77 (27%) 208 0.67063 1 9.9183e-05 0.0762 1 1 0.48029 1 0.12281 1 0.84397 1 0.18526 1 0.50396 1 0.45061 1 0.34719 1 0.1347 1 Amp Peak 3(1q21.3) 209 (73%) 76 0.12325 1 0.029389 1 0.13912 1 0.28844 1 0.042406 1 0.89923 1 0.70036 1 0.71925 1 0.95045 1 0.19572 1 0.45485 1 Amp Peak 4(3p11.1) 42 (15%) 243 0.46623 1 0.77933 1 0.4042 1 0.09161 1 0.34666 1 0.11943 1 0.040114 1 0.83041 1 0.21442 1 1 1 0.48305 1 Amp Peak 5(3q26.2) 103 (36%) 182 0.7681 1 0.094469 1 1 1 0.67185 1 0.77959 1 0.87892 1 0.16054 1 0.43384 1 0.25323 1 0.77538 1 1 1 Amp Peak 6(5p15.33) 184 (65%) 101 0.21185 1 0.002596 1 0.063581 1 0.022709 1 0.29649 1 0.091756 1 0.5267 1 0.35845 1 0.59467 1 1 1 0.22633 1 Amp Peak 7(5p12) 168 (59%) 117 0.048617 1 0.0035718 1 0.053575 1 0.70687 1 0.3367 1 0.019093 1 0.39475 1 0.08116 1 0.18676 1 0.56893 1 1 1 Amp Peak 8(6p25.3) 108 (38%) 177 0.64841 1 0.14712 1 0.71444 1 0.96506 1 0.82115 1 0.44567 1 0.026057 1 0.36401 1 0.17123 1 1 1 0.86507 1 Amp Peak 9(6p21.1) 100 (35%) 185 0.55409 1 0.20418 1 0.38347 1 0.86115 1 0.92466 1 0.4741 1 0.25954 1 0.1624 1 0.54058 1 1 1 0.22434 1 Amp Peak 10(7p11.2) 149 (52%) 136 0.13992 1 0.02843 1 0.81196 1 0.70705 1 0.56604 1 0.087851 1 0.0074193 1 0.82933 1 0.11676 1 0.77868 1 1 1 Amp Peak 11(7q31.2) 118 (41%) 167 0.95062 1 0.0061401 1 0.90415 1 0.48166 1 0.4876 1 0.5415 1 0.2717 1 0.63071 1 0.53448 1 0.1554 1 0.61588 1 Amp Peak 12(8p11.21) 95 (33%) 190 0.4698 1 0.031247 1 0.043595 1 0.26989 1 0.31272 1 0.93375 1 0.18881 1 0.44634 1 0.25095 1 0.55427 1 0.16044 1 Amp Peak 13(8q11.1) 127 (45%) 158 0.70503 1 0.02593 1 0.40452 1 0.77486 1 0.17615 1 0.36724 1 0.48768 1 0.66854 1 0.60489 1 0.77869 1 0.019618 1 Amp Peak 14(8q24.21) 183 (64%) 102 0.32806 1 0.19081 1 0.62158 1 0.96495 1 0.065456 1 0.2179 1 0.8527 1 0.97532 1 0.92396 1 0.39058 1 0.60674 1 Amp Peak 15(11q13.3) 99 (35%) 186 0.96158 1 0.00010993 0.0843 0.26492 1 0.61157 1 0.42188 1 0.60232 1 0.48543 1 0.662 1 0.16276 1 1 1 0.49024 1 Amp Peak 16(12p12.1) 100 (35%) 185 0.02544 1 0.21298 1 0.90095 1 0.94743 1 0.79667 1 0.32768 1 0.19493 1 0.41779 1 0.4202 1 0.7739 1 1 1 Amp Peak 17(12q14.1) 91 (32%) 194 0.15807 1 0.030909 1 0.79948 1 0.48577 1 0.60985 1 0.41074 1 0.30924 1 0.55568 1 0.1643 1 1 1 0.598 1 Amp Peak 18(12q15) 93 (33%) 192 0.40407 1 0.12879 1 1 1 0.38607 1 0.6095 1 0.34643 1 0.24091 1 0.65392 1 0.40847 1 0.7631 1 0.86012 1 Amp Peak 19(13q32.1) 49 (17%) 236 0.9565 1 0.66465 1 0.27588 1 NA NA 0.89321 1 0.27498 1 0.77605 1 0.68989 1 0.93413 1 1 1 0.51118 1 Amp Peak 20(14q13.3) 126 (44%) 159 0.44825 1 0.43465 1 0.54981 1 0.55479 1 0.45844 1 0.44343 1 0.95608 1 0.25701 1 0.84399 1 1 1 1 1 Amp Peak 21(17q12) 127 (45%) 158 0.8087 1 0.629 1 1 1 0.11193 1 0.4864 1 0.56195 1 0.55777 1 0.17787 1 0.55025 1 0.087343 1 0.40583 1 Amp Peak 22(17q25.3) 147 (52%) 138 0.45536 1 0.049437 1 0.72274 1 0.37542 1 0.52935 1 0.36032 1 0.24845 1 0.059391 1 0.59804 1 1 1 0.40887 1 Amp Peak 23(18q11.2) 59 (21%) 226 0.92022 1 0.7825 1 0.30475 1 0.82942 1 0.078023 1 0.91741 1 0.68716 1 0.15535 1 0.47802 1 1 1 0.22202 1 Amp Peak 24(19q12) 74 (26%) 211 0.79051 1 0.28567 1 0.041614 1 0.28216 1 0.6714 1 0.46342 1 0.58642 1 0.71373 1 0.64349 1 0.19488 1 0.71073 1 Amp Peak 25(20p11.21) 108 (38%) 177 0.55085 1 0.67568 1 0.54192 1 0.18976 1 0.19106 1 0.033778 1 0.017677 1 0.32146 1 0.0062501 1 1 1 0.0058218 1 Amp Peak 26(20q13.2) 132 (46%) 153 0.96113 1 0.36459 1 0.47499 1 0.12474 1 0.10881 1 0.060003 1 0.082304 1 0.20249 1 0.044425 1 0.77719 1 0.13481 1 Amp Peak 27(20q13.33) 135 (47%) 150 0.57919 1 0.49416 1 0.81295 1 0.19015 1 0.20315 1 0.044302 1 0.16479 1 0.2005 1 0.039488 1 0.57928 1 0.18492 1 Amp Peak 28(Xq28) 100 (35%) 185 0.17722 1 0.063802 1 0.13748 1 0.27856 1 0.34521 1 0.51779 1 0.3448 1 0.43619 1 0.26052 1 0.38907 1 0.73267 1 Del Peak 1(1p36.13) 72 (25%) 213 0.038397 1 0.50044 1 0.13225 1 0.5275 1 0.6193 1 0.06272 1 0.10474 1 0.50897 1 0.10461 1 0.74393 1 0.57011 1 Del Peak 2(1p13.1) 90 (32%) 195 0.61884 1 0.074311 1 0.60945 1 0.6199 1 0.4082 1 0.78974 1 0.5535 1 0.583 1 0.16915 1 1 1 0.38024 1 Del Peak 3(2q22.1) 32 (11%) 253 0.85617 1 0.1393 1 1 1 0.7766 1 0.37247 1 0.37579 1 0.40308 1 0.2156 1 0.14135 1 1 1 1 1 Del Peak 4(2q37.3) 41 (14%) 244 0.49596 1 0.62351 1 0.12731 1 0.41902 1 0.35864 1 0.82538 1 0.12411 1 0.44909 1 0.56585 1 0.22643 1 0.35636 1 Del Peak 5(3p21.31) 139 (49%) 146 0.92342 1 0.5285 1 0.81289 1 0.07406 1 0.20056 1 0.00021705 0.166 0.044425 1 0.54456 1 0.31748 1 0.57357 1 0.86871 1 Del Peak 6(3q11.1) 80 (28%) 205 0.47282 1 0.50688 1 0.89506 1 0.12469 1 0.84206 1 0.98928 1 0.76327 1 0.63203 1 0.48336 1 0.36454 1 0.58082 1 Del Peak 7(3q28) 76 (27%) 209 0.67397 1 0.11697 1 0.28537 1 0.43389 1 0.73207 1 0.84216 1 0.3078 1 0.63508 1 0.23007 1 1 1 1 1 Del Peak 8(4p15.2) 66 (23%) 219 0.93144 1 0.029041 1 0.77857 1 0.74363 1 0.22077 1 0.4991 1 0.49767 1 0.93833 1 0.61764 1 0.18701 1 1 1 Del Peak 9(4q35.2) 104 (36%) 181 0.61186 1 0.04969 1 0.32465 1 0.16264 1 0.25082 1 0.22165 1 0.47987 1 0.35292 1 0.75048 1 0.23876 1 0.39417 1 Del Peak 10(5q11.2) 104 (36%) 181 0.39847 1 0.013474 1 0.80556 1 0.49791 1 0.67528 1 0.72713 1 0.059619 1 0.412 1 0.37486 1 1 1 1 1 Del Peak 11(5q22.1) 120 (42%) 165 0.33842 1 0.00017349 0.133 0.71828 1 0.49791 1 0.40877 1 0.58537 1 0.054482 1 0.95373 1 0.079886 1 1 1 1 1 Del Peak 12(6q12) 98 (34%) 187 0.19845 1 0.58802 1 0.32011 1 0.17273 1 0.67507 1 0.64559 1 0.07673 1 0.36895 1 0.0088162 1 1 1 0.60365 1 Del Peak 13(6q22.31) 140 (49%) 145 0.45741 1 0.53772 1 0.72236 1 0.1635 1 0.78564 1 0.86314 1 0.66021 1 0.51897 1 0.24992 1 0.57278 1 1 1 Del Peak 14(6q26) 143 (50%) 142 0.54127 1 0.43708 1 0.34241 1 0.23407 1 0.4305 1 0.98124 1 0.39337 1 0.13351 1 0.070108 1 0.41208 1 0.62333 1 Del Peak 15(8p23.2) 140 (49%) 145 0.85443 1 0.16913 1 0.23478 1 0.041047 1 0.027004 1 0.32428 1 0.71142 1 0.64033 1 0.97794 1 0.40601 1 0.51164 1 Del Peak 16(8p21.3) 149 (52%) 136 0.18152 1 0.6512 1 0.15323 1 0.036617 1 0.031181 1 0.32523 1 0.37011 1 0.1541 1 0.89237 1 0.26236 1 0.62423 1 Del Peak 17(9p23) 158 (55%) 127 0.090567 1 0.10947 1 1 1 0.67805 1 0.63039 1 0.9699 1 0.012579 1 0.84857 1 0.26424 1 0.77869 1 0.50901 1 Del Peak 18(9p21.3) 167 (59%) 118 0.47804 1 0.025848 1 0.14833 1 0.8496 1 0.88725 1 0.90166 1 0.0032458 1 0.9536 1 0.043973 1 0.77759 1 0.61588 1 Del Peak 19(9q21.11) 142 (50%) 143 0.30557 1 0.24847 1 0.63506 1 0.93876 1 0.092475 1 0.23141 1 0.29264 1 0.22015 1 0.34761 1 0.084951 1 0.32092 1 Del Peak 20(10p15.3) 72 (25%) 213 0.26986 1 0.45166 1 0.0062725 1 0.61965 1 0.37784 1 0.47253 1 0.94303 1 0.11515 1 0.6641 1 1 1 1 1 Del Peak 21(10q26.3) 76 (27%) 209 0.6531 1 0.94848 1 0.043438 1 0.16162 1 0.64224 1 0.14783 1 0.49662 1 1 1 0.19465 1 0.52441 1 0.70903 1 Del Peak 22(11p15.5) 78 (27%) 207 0.62797 1 0.033324 1 0.1842 1 0.38332 1 0.21291 1 0.95477 1 0.80305 1 0.14122 1 0.53627 1 0.52511 1 0.35692 1 Del Peak 23(11q24.1) 69 (24%) 216 0.36901 1 0.48027 1 1 1 0.22562 1 0.56254 1 0.9822 1 0.14719 1 0.19611 1 0.67775 1 0.74049 1 0.44119 1 Del Peak 24(12p13.2) 81 (28%) 204 0.22791 1 0.41356 1 0.0083222 1 0.88147 1 0.32108 1 0.78229 1 0.66027 1 0.31613 1 0.23789 1 1 1 0.58231 1 Del Peak 25(12q24.33) 70 (25%) 215 0.65175 1 0.4418 1 0.27138 1 0.46327 1 0.0034983 1 0.17364 1 0.7885 1 0.25814 1 0.73424 1 0.74142 1 0.84922 1 Del Peak 26(13q12.11) 151 (53%) 134 0.6065 1 0.105 1 0.012671 1 0.015774 1 0.051609 1 0.54523 1 0.90166 1 0.15275 1 0.86673 1 0.39518 1 0.86878 1 Del Peak 27(14q32.13) 83 (29%) 202 0.5066 1 0.8085 1 1 1 0.95157 1 0.49587 1 0.42934 1 0.070266 1 0.34711 1 0.10743 1 1 1 0.067096 1 Del Peak 28(15q12) 157 (55%) 128 0.2809 1 0.12243 1 0.23359 1 0.23844 1 0.040796 1 0.62501 1 0.97063 1 0.97648 1 0.94186 1 0.77809 1 1 1 Del Peak 29(15q15.3) 156 (55%) 129 0.39645 1 0.096376 1 0.19006 1 0.23844 1 0.017721 1 0.35799 1 0.97082 1 0.95388 1 0.92046 1 0.39491 1 0.86947 1 Del Peak 30(16q23.1) 99 (35%) 186 0.95727 1 0.40482 1 0.38596 1 0.42353 1 0.52189 1 0.43509 1 0.34384 1 0.83312 1 0.82096 1 0.38456 1 0.60294 1 Del Peak 31(17p13.3) 162 (57%) 123 0.56614 1 0.067494 1 0.14979 1 0.73602 1 0.11004 1 0.3795 1 0.98515 1 0.8662 1 0.86976 1 1 1 0.06806 1 Del Peak 32(17p11.2) 137 (48%) 148 0.10033 1 0.067901 1 0.55211 1 0.18421 1 0.1568 1 0.034862 1 0.29745 1 0.26625 1 0.77065 1 0.26044 1 0.18539 1 Del Peak 33(18q21.32) 149 (52%) 136 0.30022 1 0.1393 1 0.15323 1 0.35866 1 0.56869 1 0.43109 1 0.36504 1 0.17823 1 0.2524 1 1 1 0.62423 1 Del Peak 34(19p13.3) 158 (55%) 127 0.052514 1 0.26457 1 0.00078641 0.6 0.89483 1 0.51127 1 0.17255 1 0.11756 1 0.54045 1 0.019254 1 1 1 0.24414 1 Del Peak 35(19p13.2) 151 (53%) 134 0.37317 1 0.058322 1 8.52e-05 0.0655 0.89483 1 0.54296 1 0.39229 1 0.17256 1 0.26345 1 0.10593 1 0.77764 1 0.62007 1 Del Peak 36(19p12) 123 (43%) 162 0.016416 1 0.027854 1 0.0081773 1 0.94758 1 0.84804 1 0.15573 1 0.0041583 1 0.14399 1 0.00016079 0.123 0.78254 1 0.7386 1 Del Peak 37(19q13.33) 110 (39%) 175 0.054226 1 0.21385 1 0.22215 1 0.51449 1 0.41495 1 0.661 1 0.74527 1 0.21141 1 0.21355 1 1 1 0.49685 1 Del Peak 38(21q11.2) 101 (35%) 184 0.48165 1 0.050785 1 0.53672 1 0.68694 1 0.3995 1 0.9323 1 0.96848 1 0.81507 1 0.63594 1 0.77603 1 0.30213 1 Del Peak 39(21q21.3) 98 (34%) 187 0.37631 1 0.11389 1 0.10363 1 0.58936 1 0.64927 1 0.77957 1 0.92185 1 0.8788 1 0.58384 1 0.77006 1 0.60365 1 Del Peak 40(22q13.32) 142 (50%) 143 0.53309 1 0.060225 1 0.19189 1 0.43718 1 0.53048 1 0.96373 1 0.32067 1 0.82974 1 0.62452 1 0.572 1 1 1 Del Peak 41(Xp22.2) 84 (29%) 201 0.5395 1 0.16843 1 0.018734 1 0.94841 1 0.5833 1 0.81338 1 0.47896 1 0.69216 1 0.55589 1 1 1 0.46789 1 Del Peak 42(Xp21.3) 82 (29%) 203 0.74785 1 0.18237 1 0.066071 1 0.94841 1 0.65042 1 0.55098 1 0.78013 1 0.6261 1 0.729 1 0.53066 1 0.58493 1