rank geneset description genes N_genes mut_tally N n npat nsite nsil n1 n2 n3 n4 n5 n6 p_ns_s p q 1 HSA00627_1,4_DICHLOROBENZENE_DEGRADATION Genes involved in 1,4-dichlorobenzene degradation CMBL 1 CMBL(3) 134924 3 3 3 1 0 1 0 2 0 0 0.81 0.026 1.00 2 HSA00902_MONOTERPENOID_BIOSYNTHESIS Genes involved in monoterpenoid biosynthesis CYP2C19, CYP2C9 2 CYP2C19(8), CYP2C9(3) 537026 11 10 11 3 5 3 0 2 1 0 0.55 0.13 1.00 3 HSA00750_VITAMIN_B6_METABOLISM Genes involved in vitamin B6 metabolism AOX1, PDXK, PDXP, PNPO, PSAT1 5 AOX1(13), PDXP(1), PSAT1(3) 1297976 17 16 17 2 6 5 0 5 1 0 0.13 0.15 1.00 4 SA_G2_AND_M_PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. CDC2, CDC25A, CDC25B, CDK7, CDKN1A, CHEK1, NEK1, WEE1 7 CDC25B(2), CDK7(1), CDKN1A(2), CHEK1(5), NEK1(3), WEE1(4) 1922578 17 17 17 1 7 5 1 3 1 0 0.10 0.23 1.00 5 HSA00472_D_ARGININE_AND_D_ORNITHINE_METABOLISM Genes involved in D-arginine and D-ornithine metabolism DAO 1 DAO(2) 192952 2 2 2 0 0 1 0 0 1 0 0.50 0.27 1.00 6 P27PATHWAY p27 blocks the G1/S transition by inhibiting the checkpoint kinase cdk2/cyclin E and is inhibited by cdk2-mediated ubiquitination. CCNE1, CDK2, CDKN1B, CKS1B, CUL1, E2F1, NEDD8, RB1, RBX1, SKP1A, SKP2, TFDP1, UBE2M 11 CCNE1(3), CKS1B(1), CUL1(4), E2F1(2), RBX1(1), SKP2(2), TFDP1(3), UBE2M(1) 1828772 17 16 17 1 5 8 0 2 2 0 0.050 0.29 1.00 7 FBW7PATHWAY Cyclin E interacts with cell cycle checkpoint kinase cdk2 to allow transcription of genes required for S phase, including transcription of additional cyclin E. CCNE1, CDC34, CDK2, CUL1, E2F1, FBXW7, RB1, SKP1A, TFDP1 7 CCNE1(3), CUL1(4), E2F1(2), FBXW7(11), TFDP1(3) 1763624 23 23 21 4 6 8 3 1 5 0 0.25 0.32 1.00 8 HSA00550_PEPTIDOGLYCAN_BIOSYNTHESIS Genes involved in peptidoglycan biosynthesis GLUL, PGLYRP2 2 GLUL(4), PGLYRP2(2) 488788 6 5 6 0 1 4 1 0 0 0 0.15 0.32 1.00 9 HSA00780_BIOTIN_METABOLISM Genes involved in biotin metabolism BTD, HLCS, SPCS1, SPCS3 4 BTD(2), HLCS(5), SPCS1(1), SPCS3(2) 826632 10 9 10 2 2 2 2 0 4 0 0.40 0.41 1.00 10 IL18PATHWAY Pro-inflammatory IL-18 is activated in macrophages by caspase-1 cleavage and, in conjunction with IL-12, stimulates Th1 cell differentiation. CASP1, IFNG, IL12A, IL12B, IL18, IL2 6 CASP1(1), IFNG(1), IL12A(1), IL12B(3) 802958 6 6 6 1 3 1 0 0 2 0 0.52 0.48 1.00 11 HBXPATHWAY Hbx is a hepatitis B protein that activates a number of transcription factors, possibly by inducing calcium release from the mitochondrion to the cytoplasm. CREB1, GRB2, HBXIP, HRAS, PTK2B, SHC1, SOS1, SRC 8 CREB1(1), HBXIP(1), HRAS(4), SHC1(2), SOS1(11) 2356186 19 18 19 1 3 8 2 4 2 0 0.038 0.49 1.00 12 BETAOXIDATIONPATHWAY Beta-Oxidation of Fatty Acids ACADL, ACADM, ACADS, ACAT1, ECHS1, HADHA 6 ACADL(2), ACADM(1), ACADS(2), ACAT1(2), ECHS1(1), HADHA(2) 1435570 10 10 10 1 0 4 1 3 2 0 0.27 0.52 1.00 13 HSA00660_C5_BRANCHED_DIBASIC_ACID_METABOLISM Genes involved in C5-branched dibasic acid metabolism ILVBL, SUCLA2 2 ILVBL(2), SUCLA2(2) 558208 4 4 4 0 1 1 0 2 0 0 0.31 0.53 1.00 14 SKP2E2FPATHWAY E2F-1, a transcription factor that promotes the G1/S transition, is repressed by Rb and activated by cdk2/cyclin E. CCNA1, CCNE1, CDC34, CDK2, CUL1, E2F1, RB1, SKP1A, SKP2, TFDP1 8 CCNA1(1), CCNE1(3), CUL1(4), E2F1(2), SKP2(2), TFDP1(3) 1825390 15 14 15 1 6 7 0 1 1 0 0.061 0.57 1.00 15 HSA00900_TERPENOID_BIOSYNTHESIS Genes involved in terpenoid biosynthesis FDFT1, FDPS, GGPS1, IDI1, IDI2, SQLE 6 FDFT1(1), FDPS(1), GGPS1(2), IDI1(1), IDI2(2), SQLE(3) 1143294 10 9 10 0 3 3 0 4 0 0 0.072 0.60 1.00 16 PLCDPATHWAY Phospholipase C (PLC-d1) hydrolyzes the membrane lipid PIP2 to DAG and IP3, which induce calcium influx and activates protein kinase C. ADRA1B, PLCD1, PRKCA, PRKCB1, TGM2 4 ADRA1B(3), PLCD1(1), PRKCA(5), TGM2(1) 1332686 10 10 10 1 2 3 1 3 1 0 0.23 0.61 1.00 17 HSA00520_NUCLEOTIDE_SUGARS_METABOLISM Genes involved in nucleotide sugars metabolism GALE, GALT, TGDS, UGDH, UGP2, UXS1 5 GALT(1), TGDS(1), UGDH(2), UGP2(4) 1151304 8 8 8 1 3 2 0 1 2 0 0.36 0.63 1.00 18 BLOOD_GROUP_GLYCOLIPID_BIOSYNTHESIS_LACTOSERIES ABO, FUT1, FUT2, FUT3, FUT5, FUT6, SIAT6, ST3GAL3 7 ABO(1), FUT2(1), FUT3(3), FUT5(4), FUT6(2) 1364014 11 10 11 2 0 6 4 1 0 0 0.23 0.64 1.00 19 PEPIPATHWAY Proepithelin (PEPI) induces epithelial cells to secrete IL-8, which promotes elastase secretion by neutrophils. ELA1, ELA2, ELA2A, ELA2B, ELA3B, GRN, IL8, SLPI 3 GRN(3) 452298 3 3 3 1 0 2 1 0 0 0 0.74 0.64 1.00 20 EOSINOPHILSPATHWAY Recruitment of eosinophils in the inflammatory response observed in asthma occurs via the chemoattractant eotaxin binding to the CCR3 receptor. CCL11, CCL5, CCR3, CSF2, HLA-DRA, HLA-DRB1, IL3, IL5 8 CCR3(1), HLA-DRA(1), HLA-DRB1(2), IL3(1) 804738 5 5 5 0 2 1 0 0 2 0 0.26 0.67 1.00 21 TERPENOID_BIOSYNTHESIS FDFT1, FDPS, FDPS, LOC402397, IDI1, SQLE 4 FDFT1(1), FDPS(1), IDI1(1), SQLE(3) 855824 6 6 6 0 1 2 0 3 0 0 0.21 0.68 1.00 22 C21_STEROID_HORMONE_METABOLISM AKR1C4, AKR1D1, CYP11A1, CYP11B1, CYP11B2, CYP17A1, CYP21A2, HSD11B1, HSD11B2, HSD3B1, HSD3B2 10 AKR1C4(1), AKR1D1(4), CYP11A1(2), CYP11B2(7), CYP17A1(2), CYP21A2(2), HSD11B1(3), HSD11B2(1), HSD3B1(5), HSD3B2(3) 2251522 30 28 30 6 8 11 0 9 2 0 0.12 0.70 1.00 23 HSA00140_C21_STEROID_HORMONE_METABOLISM Genes involved in C21-steroid hormone metabolism AKR1C4, AKR1D1, CYP11A1, CYP11B1, CYP11B2, CYP17A1, CYP21A2, HSD11B1, HSD11B2, HSD3B1, HSD3B2 10 AKR1C4(1), AKR1D1(4), CYP11A1(2), CYP11B2(7), CYP17A1(2), CYP21A2(2), HSD11B1(3), HSD11B2(1), HSD3B1(5), HSD3B2(3) 2251522 30 28 30 6 8 11 0 9 2 0 0.12 0.70 1.00 24 FLUMAZENILPATHWAY Flumazenil is a benzodiazepine receptor antagonist that may induce protective preconditioning in ischemic cardiomyocytes. GABRA1, GABRA2, GABRA3, GABRA4, GABRA5, GABRA6, GPX1, PRKCE, SOD1 8 GABRA1(7), GABRA3(4), GABRA4(4), GABRA5(6), GABRA6(8), PRKCE(3) 1874874 32 27 32 7 3 11 5 8 5 0 0.35 0.72 1.00 25 FXRPATHWAY The nuclear receptor transcription factors FXR and LXR are activated by cholesterol metabolites and regulate cholesterol homeostasis. FABP6, LDLR, NR0B2, NR1H3, NR1H4, RXRA 6 FABP6(1), LDLR(4), NR0B2(1), NR1H3(2), NR1H4(7), RXRA(2) 1458888 17 17 17 4 6 3 1 4 3 0 0.44 0.72 1.00 26 IL5PATHWAY Pro-inflammatory IL-5 is secretes by activated T cells, eosinophils, and mast cells, and stimulates the proliferation and activation of eosinophils in bone marrow. CCL11, CCR3, CD4, HLA-DRA, HLA-DRB1, IL1B, IL4, IL5, IL5RA, IL6 10 CCR3(1), CD4(1), HLA-DRA(1), HLA-DRB1(2), IL1B(1), IL4(2), IL5RA(3), IL6(1) 1418126 12 11 12 2 2 6 0 1 3 0 0.27 0.73 1.00 27 HSA00950_ALKALOID_BIOSYNTHESIS_I Genes involved in alkaloid biosynthesis I DDC, GOT1, GOT2, TAT, TYR 5 DDC(4), GOT2(3), TAT(1), TYR(10) 1254366 18 17 18 4 2 11 0 3 2 0 0.29 0.73 1.00 28 METHIONINEPATHWAY Catabolic Pathways for Methionine, Isoleucine, Threonine and Valine BCKDHB, BCKDK, CBS, CTH, MUT 5 BCKDHB(2), CBS(4), MUT(4) 1310080 10 9 10 0 3 4 0 1 2 0 0.067 0.74 1.00 29 FREEPATHWAY Neutrophils release superoxide to induce lysis in invading bacteria; in neighboring endothelial cells, superoxide dismutase scavenges radicals but produces pro-apoptotic peroxides. GPX1, GSR, GSS, IL8, NFKB1, NOX1, RELA, SOD1, TNF, XDH 10 GSR(4), GSS(2), NFKB1(2), NOX1(2), RELA(3), TNF(1), XDH(10) 2663058 24 18 24 3 5 10 2 4 3 0 0.059 0.74 1.00 30 TCRMOLECULE T Cell Receptor and CD3 Complex CD3D, CD3E, CD3G, CD3Z, TRA@, TRB@ 3 CD3D(1) 303668 1 1 1 0 0 0 0 1 0 0 0.79 0.75 1.00 31 HSA00471_D_GLUTAMINE_AND_D_GLUTAMATE_METABOLISM Genes involved in D-glutamine and D-glutamate metabolism GLS, GLS2, GLUD1, GLUD2 4 GLS(4), GLS2(1), GLUD1(4), GLUD2(9) 1209154 18 17 18 4 5 7 0 3 3 0 0.45 0.76 1.00 32 ASBCELLPATHWAY B cells require interaction with helper T cells to produce antigen-specific immunoglobulins as a key element of the human immune response. CD28, CD4, CD80, HLA-DRA, HLA-DRB1, IL10, IL2, IL4, TNFRSF5, TNFRSF6, TNFSF5, TNFSF6 8 CD4(1), CD80(3), HLA-DRA(1), HLA-DRB1(2), IL10(2), IL4(2) 1056608 11 10 11 3 4 1 1 3 2 0 0.51 0.78 1.00 33 HSA00730_THIAMINE_METABOLISM Genes involved in thiamine metabolism LHPP, MTMR1, MTMR2, MTMR6, NFS1, PHPT1, THTPA, TPK1 8 MTMR1(1), MTMR2(2), MTMR6(5), NFS1(2), TPK1(5) 1724286 15 14 15 2 5 5 1 3 1 0 0.24 0.82 1.00 34 ERBB4PATHWAY ErbB4 (aka HER4) is a receptor tyrosine kinase that binds neuregulins as well as members of the EGF family, which also target EGF receptors. ADAM17, ERBB4, NRG2, NRG3, PRKCA, PRKCB1, PSEN1 6 ERBB4(13), NRG2(3), NRG3(9), PRKCA(5), PSEN1(3) 2393032 33 31 33 6 7 12 3 4 7 0 0.22 0.87 1.00 35 NEUROTRANSMITTERSPATHWAY Biosynthesis of neurotransmitters DBH, GAD1, HDC, PNMT, TH, TPH1 6 DBH(1), GAD1(5), HDC(6), PNMT(2), TH(1), TPH1(2) 1629590 17 16 17 4 6 8 1 1 1 0 0.25 0.88 1.00 36 P53PATHWAY p53 induces cell cycle arrest or apoptosis under conditions of DNA damage. APAF1, ATM, BAX, BCL2, CCND1, CCNE1, CDK2, CDK4, CDKN1A, E2F1, GADD45A, MDM2, PCNA, RB1, TIMP3, TP53 14 APAF1(4), ATM(8), BAX(1), CCND1(1), CCNE1(3), CDKN1A(2), E2F1(2), GADD45A(1), MDM2(2) 4160394 24 23 24 1 7 9 1 5 2 0 0.016 0.88 1.00 37 P53HYPOXIAPATHWAY Hypoxia induces p53 accumulation and consequent apoptosis with p53-mediated cell cycle arrest, which is present under conditions of DNA damage. ABCB1, AKT1, ATM, BAX, CDKN1A, CPB2, CSNK1A1, CSNK1D, FHL2, GADD45A, HIC1, HIF1A, HSPA1A, HSPCA, IGFBP3, MAPK8, MDM2, NFKBIB, NQO1, TP53 18 ABCB1(17), AKT1(1), ATM(8), BAX(1), CDKN1A(2), CPB2(3), CSNK1A1(2), CSNK1D(2), FHL2(1), GADD45A(1), HIF1A(1), IGFBP3(2), MAPK8(2), MDM2(2), NFKBIB(1) 5351036 46 37 46 4 18 14 1 8 4 1 0.0086 0.89 1.00 38 RANKLPATHWAY RANK is a TNF-type receptor that promotes osteoclast differentiation and consequent bone resorbtion on binding RANK ligand produced by osteoblasts. FOS, FOSL1, FOSL2, IFNAR1, IFNAR2, IFNB1, ISGF3G, MAPK8, NFKB1, PRKR, RELA, TNFRSF11A, TNFSF11, TRAF6 12 FOS(2), FOSL1(1), FOSL2(1), IFNAR1(2), IFNB1(2), MAPK8(2), NFKB1(2), RELA(3), TNFRSF11A(2), TNFSF11(1), TRAF6(5) 2969574 23 20 23 2 10 9 1 1 2 0 0.061 0.89 1.00 39 PLK3PATHWAY Active Plk3 phosphorylates CDC25c, blocking the G2/M transition, and phosphorylates p53 to induce apoptosis. ATM, ATR, CDC25C, CHEK1, CHEK2, CNK, TP53, YWHAH 6 ATM(8), ATR(13), CDC25C(1), CHEK1(5), CHEK2(3) 4064808 30 23 30 2 9 9 3 5 4 0 0.048 0.90 1.00 40 NUCLEOTIDE_SUGARS_METABOLISM GALE, GALT, TGDS, UGDH, UXS1 4 GALT(1), TGDS(1), UGDH(2) 872378 4 4 4 0 2 1 0 0 1 0 0.34 0.91 1.00 41 HSA00592_ALPHA_LINOLENIC_ACID_METABOLISM Genes involved in alpha-Linolenic acid metabolism ACOX1, ACOX3, FADS2, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6 15 ACOX1(2), ACOX3(5), FADS2(1), PLA2G2A(1), PLA2G2E(2), PLA2G2F(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5) 2725002 30 27 30 5 8 11 6 0 5 0 0.095 0.92 1.00 42 UREACYCLEPATHWAY Ammonia released from amino acid deamination is used to produce carbamoyl phosphate, which is used to convert ornithine to citrulline, from which urea is eventually formed. ARG1, ASL, ASS, CPS1, GLS, GLUD1, GOT1 5 ARG1(2), ASL(4), GLS(4), GLUD1(4) 1248848 14 13 14 4 2 5 1 4 2 0 0.64 0.92 1.00 43 BBCELLPATHWAY Fas ligand expression by T cells induces apoptosis in Fas-expressing, inactive B cells. CD28, CD4, HLA-DRA, HLA-DRB1, TNFRSF5, TNFRSF6, TNFSF5, TNFSF6 4 CD4(1), HLA-DRA(1), HLA-DRB1(2) 629408 4 4 4 2 2 0 0 0 2 0 0.78 0.94 1.00 44 ARENRF2PATHWAY Nrf1 and nrf2 are transcription factors that bind to antioxidant response elements (AREs), promoters of genes involved in oxidative damage control. CREB1, FOS, FXYD2, JUN, KEAP1, MAFF, MAFG, MAFK, MAPK1, MAPK14, MAPK8, NFE2L2, PRKCA, PRKCB1 11 CREB1(1), FOS(2), JUN(3), MAPK1(1), MAPK14(1), MAPK8(2), PRKCA(5) 1752410 15 15 14 3 8 4 1 1 1 0 0.41 0.94 1.00 45 HSA00440_AMINOPHOSPHONATE_METABOLISM Genes involved in aminophosphonate metabolism CARM1, CHPT1, HEMK1, LCMT1, LCMT2, METTL2B, METTL6, PCYT1A, PCYT1B, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, WBSCR22 16 CARM1(1), CHPT1(1), LCMT1(2), LCMT2(2), METTL2B(1), METTL6(2), PCYT1B(2), PRMT2(2), PRMT3(3), PRMT5(2), PRMT6(2), PRMT7(6), PRMT8(3), WBSCR22(3) 3787484 32 28 32 4 7 14 2 3 6 0 0.034 0.95 1.00 46 TERCPATHWAY hTERC, the RNA subunit of telomerase, and hTERT, the catalytic protein subunit, are required for telomerase activity and are overexpressed in many cancers. NFYA, NFYB, NFYC, RB1, SP1, SP3 5 NFYA(1), NFYB(1), SP1(2), SP3(1) 1301536 5 5 5 1 0 3 0 1 1 0 0.62 0.95 1.00 47 SA_REG_CASCADE_OF_CYCLIN_EXPR Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. CCNA1, CCNA2, CCND1, CCNE1, CCNE2, CDK2, CDK4, CDKN1B, CDKN2A, E2F1, E2F2, E2F4, PRB1 12 CCNA1(1), CCNA2(1), CCND1(1), CCNE1(3), CCNE2(2), E2F1(2), PRB1(4) 2269678 14 13 14 1 6 6 1 0 1 0 0.085 0.95 1.00 48 RACCYCDPATHWAY Ras, Rac, and Rho coordinate to induce cyclin D1 expression and activate cdk2 to promote the G1/S transition. AKT1, ARHA, CCND1, CCNE1, CDK2, CDK4, CDK6, CDKN1A, CDKN1B, E2F1, HRAS, MAPK1, MAPK3, NFKB1, NFKBIA, PAK1, PIK3CA, PIK3R1, RAC1, RAF1, RB1, RELA, TFDP1 20 AKT1(1), CCND1(1), CCNE1(3), CDKN1A(2), E2F1(2), HRAS(4), MAPK1(1), MAPK3(1), NFKB1(2), PAK1(2), PIK3R1(2), RAC1(1), RAF1(1), RELA(3), TFDP1(3) 4332164 29 26 29 3 9 9 2 7 2 0 0.032 0.96 1.00 49 BLOOD_GROUP_GLYCOLIPID_BIOSYNTHESIS_NEOLACTOSERIES ABO, B3GNT1, FUT1, FUT2, FUT9, GCNT2, ST8SIA1 7 ABO(1), FUT2(1), FUT9(5), GCNT2(2), ST8SIA1(3) 1640626 12 12 12 3 4 4 0 3 1 0 0.45 0.96 1.00 50 HSA00401_NOVOBIOCIN_BIOSYNTHESIS Genes involved in novobiocin biosynthesis GOT1, GOT2, TAT 3 GOT2(3), TAT(1) 701676 4 4 4 2 1 2 0 1 0 0 0.81 0.97 1.00 51 HSA00630_GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM Genes involved in glyoxylate and dicarboxylate metabolism ACO1, ACO2, AFMID, CS, GRHPR, HAO1, HAO2, HYI, LOC441996, MDH1, MDH2, MTHFD1, MTHFD1L, MTHFD2 13 ACO1(2), ACO2(3), AFMID(1), GRHPR(2), HAO1(7), MDH1(1), MDH2(1), MTHFD1(4), MTHFD1L(2), MTHFD2(4) 3574774 27 25 27 4 10 8 1 4 4 0 0.073 0.97 1.00 52 IGF1PATHWAY Growth factor IGF-1 stimulates growth and inhibits apoptosis by activating the MAP kinase pathway in a variety of cell types. CSNK2A1, ELK1, FOS, GRB2, HRAS, IGF1, IGF1R, IRS1, JUN, MAP2K1, MAPK3, MAPK8, PIK3CA, PIK3R1, PTPN11, RAF1, RASA1, SHC1, SOS1, SRF 19 CSNK2A1(3), FOS(2), HRAS(4), IGF1(3), IGF1R(1), IRS1(6), JUN(3), MAP2K1(2), MAPK3(1), MAPK8(2), PIK3R1(2), PTPN11(3), RAF1(1), RASA1(8), SHC1(2), SOS1(11), SRF(2) 6007322 56 47 55 6 18 19 2 7 10 0 0.0053 0.97 1.00 53 FOSBPATHWAY FOSB gene expression and drug abuse CDK5, FOSB, GRIA2, JUND, PPP1R1B 5 CDK5(1), GRIA2(7), JUND(2), PPP1R1B(1) 1030442 11 9 11 6 1 5 1 1 3 0 0.87 0.97 1.00 54 CYSTEINE_METABOLISM CARS, CTH, GOT1, GOT2, LDHA, LDHB, LDHC, MPST 8 CARS(8), GOT2(3), LDHB(3), LDHC(3) 1828416 17 16 17 4 3 4 1 7 2 0 0.45 0.97 1.00 55 NITROGEN_METABOLISM AMT, ASNS, CA1, CA12, CA14, CA2, CA3, CA4, CA5A, CA5B, CA6, CA7, CA8, CA9, CPS1, CTH, GLS, GLS2, GLUD1, GLUL, HAL 20 ASNS(5), CA12(2), CA14(1), CA3(4), CA4(1), CA5A(2), CA5B(2), CA6(2), CA7(3), CA9(1), GLS(4), GLS2(1), GLUD1(4), GLUL(4), HAL(2) 4252776 38 35 38 5 11 14 2 8 3 0 0.037 0.97 1.00 56 GLYOXYLATE_AND_DICARBOXYLATE_METABOLISM ACO1, ACO2, CS, GRHPR, HAO1, HAO2, HYI, MDH1, MDH2, MTHFD1, MTHFD1L, MTHFD2 12 ACO1(2), ACO2(3), GRHPR(2), HAO1(7), MDH1(1), MDH2(1), MTHFD1(4), MTHFD1L(2), MTHFD2(4) 3411370 26 24 26 4 10 8 1 4 3 0 0.089 0.97 1.00 57 HSA00643_STYRENE_DEGRADATION Genes involved in styrene degradation FAH, GSTZ1, HGD 3 FAH(1), GSTZ1(2), HGD(4) 600216 7 7 7 4 2 3 0 1 1 0 0.89 0.98 1.00 58 HSA00031_INOSITOL_METABOLISM Genes involved in inositol metabolism ALDH6A1, TPI1 2 ALDH6A1(1), TPI1(3) 440016 4 4 4 2 2 1 0 1 0 0 0.84 0.98 1.00 59 TCAPOPTOSISPATHWAY HIV infection upregulates Fas ligand in macrophages and CD4 in helper T cells, leading to widespread Fas-induced T cell apoptosis. CCR5, CD28, CD3D, CD3E, CD3G, CD3Z, CD4, TNFRSF6, TNFSF6, TRA@, TRB@ 6 CCR5(2), CD3D(1), CD4(1) 856536 4 4 4 3 0 1 0 1 2 0 0.94 0.98 1.00 60 LDLPATHWAY Low density lipoproteins (LDL) are present in blood plasma, contain cholesterol and triglycerides, and contribute to atherogenic plaque formation. ACAT1, CCL2, CSF1, IL6, LDLR, LPL 6 ACAT1(2), CSF1(2), IL6(1), LDLR(4), LPL(3) 1424712 12 12 12 3 5 6 0 1 0 0 0.42 0.98 1.00 61 HSA00625_TETRACHLOROETHENE_DEGRADATION Genes involved in tetrachloroethene degradation AKR1B10, EPHX2, HSD3B7, RDH11, RDH12, RDH13, RDH14 7 AKR1B10(2), EPHX2(2), RDH11(1), RDH12(2), RDH13(1) 1303138 8 7 8 2 2 2 0 3 1 0 0.48 0.98 1.00 62 HSA00626_NAPHTHALENE_AND_ANTHRACENE_DEGRADATION Genes involved in naphthalene and anthracene degradation CARM1, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, HEMK1, LCMT1, LCMT2, METTL2B, METTL6, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, WBSCR22 18 CARM1(1), DHRS2(2), DHRSX(4), LCMT1(2), LCMT2(2), METTL2B(1), METTL6(2), PRMT2(2), PRMT3(3), PRMT5(2), PRMT6(2), PRMT7(6), PRMT8(3), WBSCR22(3) 4026360 35 30 35 5 10 14 2 3 6 0 0.032 0.98 1.00 63 IGF1RPATHWAY Insulin-like growth factor receptor IGF-1R promotes cell growth and inhibits apoptosis on binding of ligands IGF-1 and 2 via Ras activation and the AKT pathway. AKT1, BAD, GRB2, HRAS, IGF1R, IRS1, MAP2K1, MAPK1, MAPK3, PIK3CA, PIK3R1, RAF1, SHC1, SOS1, YWHAH 14 AKT1(1), HRAS(4), IGF1R(1), IRS1(6), MAP2K1(2), MAPK1(1), MAPK3(1), PIK3R1(2), RAF1(1), SHC1(2), SOS1(11) 4442702 32 30 32 4 7 14 2 6 3 0 0.044 0.99 1.00 64 INSULINPATHWAY Insulin regulates glucose levels via Ras-mediated transcriptional activation. CSNK2A1, ELK1, FOS, GRB2, HRAS, INS, INSR, IRS1, JUN, MAP2K1, MAPK3, MAPK8, PIK3CA, PIK3R1, PTPN11, RAF1, RASA1, SHC1, SLC2A4, SOS1, SRF 20 CSNK2A1(3), FOS(2), HRAS(4), INSR(9), IRS1(6), JUN(3), MAP2K1(2), MAPK3(1), MAPK8(2), PIK3R1(2), PTPN11(3), RAF1(1), RASA1(8), SHC1(2), SLC2A4(2), SOS1(11), SRF(2) 6208284 63 50 62 9 18 21 2 10 12 0 0.013 0.99 1.00 65 ACETYLCHOLINE_SYNTHESIS ACHE, CHAT, CHKA, PCYT1A, PDHA1, PDHA2, PEMT, SLC18A3 8 ACHE(3), CHAT(9), CHKA(4), PDHA1(3), PDHA2(8), SLC18A3(8) 1870780 35 30 35 9 7 14 4 9 1 0 0.27 0.99 1.00 66 ST_JAK_STAT_PATHWAY The Janus kinase-signal transducer and activator of transcription (JAK-STAT) pathway transduces extracellular signals to promote gene activation. CISH, JAK1, JAK2, JAK3, PIAS1, PIAS3, PTPRU, REG1A, SOAT1 8 JAK1(2), JAK2(4), JAK3(7), PIAS1(5), PIAS3(3), PTPRU(7), SOAT1(1) 3645084 29 23 29 4 10 6 1 9 3 0 0.073 0.99 1.00 67 NUCLEOTIDE_GPCRS ADORA1, ADORA2A, ADORA2B, ADORA3, GPR23, LTB4R, P2RY1, P2RY2, P2RY5, P2RY6 8 ADORA1(3), ADORA2A(5), ADORA3(1), P2RY1(3), P2RY2(3), P2RY6(2) 1578504 17 14 17 5 4 9 1 2 1 0 0.20 0.99 1.00 68 SA_FAS_SIGNALING The TNF-type receptor Fas induces apoptosis on ligand binding. BCL2, CASP3, CASP8, CFL1, CFLAR, P11, PDE6D, TNFRSF6, TNFSF6 6 CASP8(2), CFL1(2), CFLAR(1) 1023322 5 5 5 2 1 1 0 1 2 0 0.81 0.99 1.00 69 UBIQUINONE_BIOSYNTHESIS NDUFA1, NDUFA10, NDUFA11, NDUFA4, NDUFA5, NDUFA8, NDUFB2, NDUFB4, NDUFB5, NDUFB6, NDUFB7, NDUFS1, NDUFS2, NDUFV1, NDUFV2 15 NDUFA10(3), NDUFB5(2), NDUFB6(1), NDUFB7(2), NDUFS1(4), NDUFV1(2), NDUFV2(2) 1860990 16 15 16 4 3 4 4 3 2 0 0.55 0.99 1.00 70 HSA00363_BISPHENOL_A_DEGRADATION Genes involved in bisphenol A degradation AKR1B10, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, HSD3B7, PON1, PON2, PON3, RDH11, RDH12, RDH13, RDH14 14 AKR1B10(2), DHRS2(2), DHRSX(4), PON1(6), PON2(1), PON3(1), RDH11(1), RDH12(2), RDH13(1) 2422936 20 17 20 4 6 4 1 7 2 0 0.23 0.99 1.00 71 CDC25PATHWAY The protein phosphatase Cdc25 is phosphorylated by Chk1 and activates Cdc2 to stimulate eukaryotic cells into M phase. ATM, CDC2, CDC25A, CDC25B, CDC25C, CHEK1, MYT1, WEE1, YWHAH 8 ATM(8), CDC25B(2), CDC25C(1), CHEK1(5), MYT1(4), WEE1(4) 3679438 24 22 24 3 8 9 2 3 2 0 0.15 0.99 1.00 72 SA_BONE_MORPHOGENETIC Bone morphogenetic protein binds to its receptor to induce ectopic bone formation and promote development of the viscera. BMP1, BMPR1A, BMPR1B, BMPR2, MADH1, MADH4, MADH6 4 BMPR1A(3), BMPR1B(1), BMPR2(1) 1681566 5 5 5 1 0 2 1 2 0 0 0.58 0.99 1.00 73 HSA00910_NITROGEN_METABOLISM Genes involved in nitrogen metabolism AMT, ASNS, ASRGL1, CA1, CA12, CA13, CA14, CA2, CA3, CA4, CA5A, CA5B, CA6, CA7, CA8, CA9, CPS1, CTH, GLS, GLS2, GLUD1, GLUD2, GLUL, HAL 23 ASNS(5), CA12(2), CA13(1), CA14(1), CA3(4), CA4(1), CA5A(2), CA5B(2), CA6(2), CA7(3), CA9(1), GLS(4), GLS2(1), GLUD1(4), GLUD2(9), GLUL(4), HAL(2) 4856374 48 42 48 8 14 19 2 8 5 0 0.058 0.99 1.00 74 TSP1PATHWAY Thrombospondin-1 (TSP-1) inhibits angiogenesis by inducing caspase-dependent apoptosis in microvascular endothelial cells. CASP3, CD36, FOS, FYN, JUN, MAPK14, THBS1 7 CD36(1), FOS(2), FYN(5), JUN(3), MAPK14(1), THBS1(1) 1965654 13 11 12 2 6 3 1 3 0 0 0.30 0.99 1.00 75 NOTCHPATHWAY Proteolysis and Signaling Pathway of Notch ADAM17, DLL1, FURIN, NOTCH1, PSEN1, RBPSUH 5 DLL1(1), FURIN(1), NOTCH1(16), PSEN1(3) 2517988 21 19 21 9 1 7 1 4 8 0 0.80 1.00 1.00 76 EEA1PATHWAY The FYVE-finger proteins EEA1 and HRS are localized to endosome membranes and regulate sorting and ubiquitination in the vesicle transport system. EEA1, EGF, EGFR, HGS, RAB5A, TF, TFRC 7 EEA1(3), EGF(6), EGFR(7), HGS(3), TF(6), TFRC(2) 3432552 27 24 26 4 10 10 0 5 2 0 0.14 1.00 1.00 77 RBPATHWAY The ATM protein kinase recognizes DNA damage and blocks cell cycle progression by phosphorylating chk1 and p53, which normally inhibits Rb to allow G1/S transitions. ATM, CDC2, CDC25A, CDC25B, CDC25C, CDK2, CDK4, CHEK1, MYT1, RB1, TP53, WEE1, YWHAH 10 ATM(8), CDC25B(2), CDC25C(1), CHEK1(5), MYT1(4), WEE1(4) 4007848 24 22 24 3 8 9 2 3 2 0 0.14 1.00 1.00 78 GLOBOSIDE_METABOLISM A4GALT, FUT1, FUT2, FUT9, GBGT1, GLA, HEXA, HEXB, NAGA, SIAT4A, SIAT4B, ST3GAL1, ST3GAL2, ST3GAL4, ST8SIA1 13 FUT2(1), FUT9(5), GBGT1(2), GLA(2), HEXA(5), NAGA(1), ST3GAL1(4), ST3GAL4(2), ST8SIA1(3) 2686198 25 21 25 5 7 9 1 7 1 0 0.18 1.00 1.00 79 CIRCADIANPATHWAY A heterodimer composed of Bmal1 and Clock acts as a transcription factor for proteins that regulate circadian rhythms, such as Per and Cry. ARNTL, CLOCK, CRY1, CRY2, CSNK1E, PER1 6 ARNTL(2), CLOCK(5), CRY1(2), CRY2(2), PER1(5) 2291394 16 14 16 3 5 4 3 3 1 0 0.35 1.00 1.00 80 CELLCYCLEPATHWAY Cyclins interact with cyclin-dependent kinases to form active kinase complexes that regulate progression through the cell cycle. CCNA1, CCNB1, CCND1, CCND2, CCND3, CCNE1, CCNH, CDC2, CDC25A, CDK2, CDK4, CDK6, CDK7, CDKN1A, CDKN1B, CDKN2A, CDKN2B, CDKN2C, CDKN2D, E2F1, RB1, RBL1, TFDP1 20 CCNA1(1), CCNB1(2), CCND1(1), CCND2(3), CCND3(1), CCNE1(3), CDK7(1), CDKN1A(2), CDKN2B(1), CDKN2C(1), E2F1(2), RBL1(5), TFDP1(3) 3697060 26 23 26 4 8 8 3 4 3 0 0.17 1.00 1.00 81 ST_STAT3_PATHWAY The transcription factor STAT3 is involved in cell growth regulation and is commonly upregulated in tumors. CISH, IL6, IL6R, JAK1, JAK2, JAK3, PIAS3, PTPRU, REG1A, SRC, STAT3 10 IL6(1), IL6R(1), JAK1(2), JAK2(4), JAK3(7), PIAS3(3), PTPRU(7), STAT3(2) 4029030 27 23 27 4 9 7 1 6 4 0 0.076 1.00 1.00 82 HSA00300_LYSINE_BIOSYNTHESIS Genes involved in lysine biosynthesis AADAT, AASDHPPT, AASS, KARS 4 AADAT(1), AASDHPPT(1), AASS(11), KARS(2) 1263444 15 12 15 5 2 8 1 2 2 0 0.75 1.00 1.00 83 RNAPATHWAY dsRNA-activated protein kinase phosphorylates elF2a, which generally inhibits translation, and activates NF-kB to provoke inflammation. CHUK, DNAJC3, EIF2S1, EIF2S2, MAP3K14, NFKB1, NFKBIA, PRKR, RELA, TP53 8 CHUK(2), EIF2S2(1), MAP3K14(1), NFKB1(2), RELA(3) 2397838 9 7 9 1 2 1 1 2 3 0 0.32 1.00 1.00 84 CAPROLACTAM_DEGRADATION AKR1A1, ECHS1, EHHADH, HADHA, SDS 5 ECHS1(1), EHHADH(1), HADHA(2), SDS(2) 1282668 6 6 6 7 1 1 1 1 2 0 1.00 1.00 1.00 85 HSA00830_RETINOL_METABOLISM Genes involved in retinol metabolism ALDH1A1, ALDH1A2, BCMO1, RDH5 4 ALDH1A2(4), BCMO1(2), RDH5(1) 1037384 7 7 7 4 2 4 0 0 1 0 0.86 1.00 1.00 86 PARKINPATHWAY In Parkinson's disease, dopaminergic neurons contain Lewy bodies consisting of alpha-synuclein and parkin, an E3 ubiquitin ligase that targets glycosylated alpha-synuclein. GPR37, PARK2, PNUTL1, SNCA, SNCAIP, UBE2E2, UBE2F, UBE2G1, UBE2G2, UBE2L3, UBE2L6, UBL1 8 GPR37(3), SNCAIP(3), UBE2G1(1), UBE2G2(1), UBE2L6(1) 1341408 9 8 9 4 3 1 2 1 2 0 0.85 1.00 1.00 87 1_2_DICHLOROETHANE_DEGRADATION ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1 8 ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH9A1(2) 2145790 12 11 12 3 3 8 0 0 1 0 0.37 1.00 1.00 88 ASCORBATE_AND_ALDARATE_METABOLISM ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1 8 ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH9A1(2) 2145790 12 11 12 3 3 8 0 0 1 0 0.37 1.00 1.00 89 GLUCOCORTICOID_MINERALOCORTICOID_METABOLISM CPN2, CYP11A1, CYP11B2, CYP17A1, HSD11B1, HSD11B2, HSD3B1, HSD3B2 8 CPN2(2), CYP11A1(2), CYP11B2(7), CYP17A1(2), HSD11B1(3), HSD11B2(1), HSD3B1(5), HSD3B2(3) 1860634 25 23 25 8 5 11 0 8 1 0 0.41 1.00 1.00 90 SA_G1_AND_S_PHASES Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition. ARF1, ARF3, CCND1, CDK2, CDK4, CDKN1A, CDKN1B, CDKN2A, CFL1, E2F1, E2F2, MDM2, NXT1, PRB1, TP53 13 ARF1(1), CCND1(1), CDKN1A(2), CFL1(2), E2F1(2), MDM2(2), NXT1(1), PRB1(4) 1900328 15 13 15 4 4 8 0 3 0 0 0.43 1.00 1.00 91 RIBOFLAVIN_METABOLISM ACP1, ACP2, ACP5, ACPP, ACPT, ENPP1, ENPP3, FLAD1, RFK, TYR 10 ACP1(2), ACP2(1), ACPT(1), ENPP1(8), ENPP3(6), FLAD1(2), TYR(10) 2596664 30 25 30 8 4 16 3 1 6 0 0.44 1.00 1.00 92 SLRPPATHWAY Small leucine-rich proteoglycans (SLRPs) interact with and reorganize collagen fibers in the extracellular matrix. BGN, DCN, DSPG3, FMOD, KERA, LUM 5 BGN(1), DCN(1), FMOD(2), LUM(2) 966006 6 6 5 3 3 3 0 0 0 0 0.73 1.00 1.00 93 RNA_POLYMERASE POLR1B, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLRMT 14 POLR1B(2), POLR2A(2), POLR2B(6), POLR2D(1), POLR2E(2), POLRMT(2) 3599872 15 14 15 2 4 5 0 2 4 0 0.15 1.00 1.00 94 1_AND_2_METHYLNAPHTHALENE_DEGRADATION ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1 7 ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH7(1), ADHFE1(2) 1501074 9 9 9 3 2 6 0 1 0 0 0.68 1.00 1.00 95 ARGININECPATHWAY Related catabolic pathways process arginine, histidine, glutamine, and proline through glutamate to alpha-ketoglutamate, which feeds into the citric acid cycle. ALDH4A1, ARG1, GLS, GLUD1, OAT, PRODH 6 ALDH4A1(3), ARG1(2), GLS(4), GLUD1(4), OAT(1), PRODH(1) 1491996 15 14 15 5 2 6 0 5 2 0 0.71 1.00 1.00 96 LYSINE_BIOSYNTHESIS AADAT, AASDH, AASDHPPT, AASS, KARS 5 AADAT(1), AASDH(6), AASDHPPT(1), AASS(11), KARS(2) 1860278 21 17 21 7 3 8 2 5 3 0 0.78 1.00 1.00 97 IFNGPATHWAY IFN gamma signaling pathway IFNG, IFNGR1, IFNGR2, JAK1, JAK2, STAT1 6 IFNG(1), IFNGR1(4), IFNGR2(1), JAK1(2), JAK2(4), STAT1(2) 2202216 14 13 14 4 7 1 2 2 2 0 0.66 1.00 1.00 98 REDUCTIVE_CARBOXYLATE_CYCLE_CO2_FIXATION ACO1, ACO2, FH, IDH1, IDH2, MDH1, MDH2, SDHB, SUCLA2 9 ACO1(2), ACO2(3), FH(2), IDH1(2), MDH1(1), MDH2(1), SDHB(2), SUCLA2(2) 2370248 15 14 15 4 5 6 1 1 2 0 0.50 1.00 1.00 99 STAT3PATHWAY The STAT transcription factors are phosphorylated and activated by JAK kinases in response to cytokine signaling. FRAP1, JAK1, JAK2, JAK3, MAPK1, MAPK3, STAT3, TYK2 7 JAK1(2), JAK2(4), JAK3(7), MAPK1(1), MAPK3(1), STAT3(2), TYK2(8) 3160924 25 22 25 5 6 8 1 6 4 0 0.19 1.00 1.00 100 ETCPATHWAY Energy is extracted from carbohydrates via oxidation and transferred to the mitochondrial electron transport chain, which couples ATP synthesis to the reduction of oxygen to water. ATP5A1, CYCS, GPD2, MTCO1, NDUFA1, SDHA, SDHB, SDHC, SDHD, UQCRC1 9 ATP5A1(3), GPD2(2), SDHA(3), SDHB(2) 1764158 10 9 10 3 5 2 0 2 1 0 0.65 1.00 1.00 101 GLYCOLYSISPATHWAY Glycolysis is an evolutionarily conserved pathway by which one glucose molecule is converted to two pyruvate molecules for a gain of 2 ATP. ALDOB, ENO1, GAPD, GPI, HK1, PFKL, PGAM1, PGK1, PKLR, TPI1 9 ALDOB(2), GPI(5), HK1(3), PFKL(2), PGK1(2), PKLR(4), TPI1(3) 2491822 21 17 21 6 5 9 0 3 4 0 0.30 1.00 1.00 102 HSA00062_FATTY_ACID_ELONGATION_IN_MITOCHONDRIA Genes involved in fatty acid elongation in mitochondria ACAA2, ECHS1, HADH, HADHA, HADHB, HSD17B10, HSD17B4, MECR, PPT1, PPT2 10 ACAA2(1), ECHS1(1), HADH(1), HADHA(2), HADHB(3), HSD17B4(1), PPT1(1), PPT2(1) 2273060 11 11 11 3 4 3 0 2 2 0 0.55 1.00 1.00 103 HSA00791_ATRAZINE_DEGRADATION Genes involved in atrazine degradation ADAR, APOBEC1, APOBEC2, APOBEC3A, APOBEC3B, APOBEC3C, APOBEC3F, APOBEC3G, APOBEC4 8 ADAR(4), APOBEC2(2), APOBEC3F(1), APOBEC4(3) 1831798 10 9 10 3 0 5 0 3 2 0 0.63 1.00 1.00 104 STEROID_BIOSYNTHESIS CYP17A1, F13B, HSD17B1, HSD17B2, HSD17B3, HSD17B4, HSD17B7, HSD3B1, HSD3B2 9 CYP17A1(2), F13B(12), HSD17B1(1), HSD17B4(1), HSD17B7(1), HSD3B1(5), HSD3B2(3) 2178186 25 24 25 7 8 8 1 7 1 0 0.47 1.00 1.00 105 MSPPATHWAY Macrophage stimulating protein is synthesized as pro-MSP by the liver and, on proteolysis, binds to monocyte receptor kinase RON to induce macrophage development. CCL2, CSF1, IL1B, MST1, MST1R, TNF 6 CSF1(2), IL1B(1), MST1(2), MST1R(3), TNF(1) 1764336 9 9 9 3 3 5 0 1 0 0 0.55 1.00 1.00 106 TCRAPATHWAY The kinases Lck and Fyn phosphorylate and activate the T cell receptor, which recognizes antigen-bound MHCII and leads to T cell activation. CD3D, CD3E, CD3G, CD3Z, CD4, FYN, HLA-DRA, HLA-DRB1, LCK, PTPRC, TRA@, TRB@, ZAP70 10 CD3D(1), CD4(1), FYN(5), HLA-DRA(1), HLA-DRB1(2), LCK(3), PTPRC(7), ZAP70(4) 2430056 24 19 24 6 8 5 3 6 2 0 0.47 1.00 1.00 107 STREPTOMYCIN_BIOSYNTHESIS GCK, HK1, HK2, HK3, IMPA1, PGM1, PGM3, TGDS 8 GCK(5), HK1(3), HK2(5), HK3(5), IMPA1(2), PGM1(1), TGDS(1) 2747252 22 19 22 5 7 10 0 3 2 0 0.23 1.00 1.00 108 SODDPATHWAY Some members of the tumor necrosis factor receptor family have cytoplasmic death domains that promote apoptosis when active and are repressed by silencers called SODDs. BAG4, BIRC3, CASP8, FADD, RIPK1, TNF, TNFRSF1A, TNFRSF1B, TRADD, TRAF2 10 BAG4(1), BIRC3(3), CASP8(2), FADD(1), TNF(1), TNFRSF1A(2), TNFRSF1B(1), TRADD(1) 2267008 12 10 12 6 4 3 1 0 4 0 0.86 1.00 1.00 109 IL17PATHWAY Activated T cells secrete IL-17, which stimulates fibroblasts and other cells to secrete inflammatory and hematopoietic cytokines. CD2, CD34, CD3D, CD3E, CD3G, CD3Z, CD4, CD58, CD8A, CSF3, IL17, IL3, IL6, IL8, KITLG, TRA@, TRB@ 13 CD2(1), CD34(2), CD3D(1), CD4(1), CD58(1), CD8A(2), IL3(1), IL6(1) 1659316 10 9 10 6 1 4 0 3 2 0 0.92 1.00 1.00 110 HSA00603_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GLOBOSERIES Genes involved in glycosphingolipid biosynthesis - globoseries A4GALT, B3GALNT1, B3GALT5, FUT1, FUT2, FUT9, GBGT1, GLA, HEXA, HEXB, NAGA, ST3GAL1, ST3GAL2, ST8SIA1 14 FUT2(1), FUT9(5), GBGT1(2), GLA(2), HEXA(5), NAGA(1), ST3GAL1(4), ST8SIA1(3) 2851204 23 20 23 5 6 9 1 6 1 0 0.21 1.00 1.00 111 NEUTROPHILPATHWAY Neutrophils are phagocytotic leukocytes that destroy foreign cells with reactive oxygen species or enzymatic digestion and express CD11 and CD18. CD44, ICAM1, ITGAL, ITGAM, ITGB2, PECAM1, SELE, SELL 8 CD44(5), ICAM1(2), ITGAL(1), ITGAM(7), ITGB2(5), SELE(4), SELL(2) 2812044 26 23 26 6 7 8 2 7 2 0 0.25 1.00 1.00 112 AHSPPATHWAY Alpha-hemoglobin stabilizing protein (AHSP) prevents precitipation of hemoglobin alpha-subunits. ALAD, ALAS1, ALAS2, CPO, ERAF, FECH, GATA1, HBA1, HBA2, HBB, HMBS, UROD, UROS 12 CPO(1), FECH(2), GATA1(3), HBB(2), UROD(1), UROS(1) 2116598 10 10 10 3 2 5 0 1 2 0 0.53 1.00 1.00 113 STEMPATHWAY In the absence of infection, bone marrow stromal cells release hematopoietic cytokines; activated macrophages and Th cells induce hematopoiesis during infection. CD4, CD8A, CSF1, CSF2, CSF3, EPO, IL11, IL2, IL3, IL4, IL5, IL6, IL7, IL8, IL9 14 CD4(1), CD8A(2), CSF1(2), IL3(1), IL4(2), IL6(1), IL7(1) 1604136 10 9 10 7 0 6 0 2 2 0 0.93 1.00 1.00 114 IONPATHWAY Activated phospholipase C hydrolyzes the lipid PIP3 into second messengers DAG, which activates protein kinase C, and IP3, which induces calcium influx into the cytoplasm. P2RY2, PLCG1, PRKCA, PRKCB1, PTK2B 4 P2RY2(3), PLCG1(3), PRKCA(5) 1788188 11 11 11 4 3 4 2 1 1 0 0.71 1.00 1.00 115 HEME_BIOSYNTHESIS ALAD, ALAS1, ALAS2, CPOX, FECH, HMBS, PPOX, UROD, UROS 9 CPOX(2), FECH(2), PPOX(1), UROD(1), UROS(1) 2042372 7 7 7 2 3 3 0 0 1 0 0.56 1.00 1.00 116 LYMPHOCYTEPATHWAY B and T cell lymphocytes interact with other cells via transmembrane adhesion proteins such as CD44, which interacts with endothelial cells. CD44, ICAM1, ITGA4, ITGAL, ITGB1, ITGB2, PECAM1, SELE, SELL 9 CD44(5), ICAM1(2), ITGA4(4), ITGAL(1), ITGB1(5), ITGB2(5), SELE(4), SELL(2) 3262562 28 21 28 5 6 10 1 9 2 0 0.17 1.00 1.00 117 BENZOATE_DEGRADATION_VIA_COA_LIGATION ACAT1, ACAT2, ACYP1, ACYP2, ECHS1, EHHADH, GCDH, HADHA, SDHB, SDS 10 ACAT1(2), ECHS1(1), EHHADH(1), GCDH(2), HADHA(2), SDHB(2), SDS(2) 2076904 12 11 12 8 3 2 2 2 3 0 0.98 1.00 1.00 118 CYTOKINEPATHWAY Intercellular signaling in the immune system occurs via secretion of cytokines, which promote antigen-dependent B and T cell response. IFNA1, IFNB1, IFNG, IL10, IL12A, IL12B, IL13, IL14, IL15, IL16, IL17, IL18, IL1A, IL2, IL3, IL4, IL5, IL6, IL8, IL9, LTA, TNF 20 IFNA1(1), IFNB1(2), IFNG(1), IL10(2), IL12A(1), IL12B(3), IL16(5), IL1A(1), IL3(1), IL4(2), IL6(1), LTA(2), TNF(1) 2651310 23 21 23 6 7 8 1 6 1 0 0.41 1.00 1.00 119 HSA00430_TAURINE_AND_HYPOTAURINE_METABOLISM Genes involved in taurine and hypotaurine metabolism BAAT, CDO1, CSAD, GAD1, GAD2, GGT1, GGTL3, GGTL4 6 BAAT(2), CSAD(2), GAD1(5), GAD2(6), GGT1(1) 1508728 16 13 16 9 7 6 0 2 1 0 0.90 1.00 1.00 120 UREA_CYCLE_AND_METABOLISM_OF_AMINO_GROUPS ACY1, ALDH18A1, ARG1, ARG2, ASL, ASS, CKB, CKM, CKMT1, CKMT1B, CKMT1A, CKMT2, CPS1, GAMT, GATM, GLUD1, NAGS, OAT, ODC1, OTC, PYCR1, SMS 19 ACY1(2), ALDH18A1(3), ARG1(2), ASL(4), CKB(1), CKM(2), CKMT2(3), GATM(1), GLUD1(4), NAGS(1), OAT(1), ODC1(1), OTC(3), PYCR1(1), SMS(2) 3823796 31 28 31 7 8 8 3 5 7 0 0.27 1.00 1.00 121 HSA00272_CYSTEINE_METABOLISM Genes involved in cysteine metabolism CARS, CARS2, CDO1, CTH, GOT1, GOT2, LDHA, LDHAL6A, LDHAL6B, LDHB, LDHC, MPST, SDS, SULT1B1, SULT1C2, SULT1C4, SULT4A1 17 CARS(8), CARS2(1), GOT2(3), LDHAL6A(2), LDHAL6B(1), LDHB(3), LDHC(3), SDS(2), SULT1B1(4), SULT1C2(4), SULT1C4(1) 3371320 32 25 32 7 11 5 4 9 3 0 0.31 1.00 1.00 122 PROTEASOMEPATHWAY Ubiquitinated proteins are targeted for proteolytic degradation by the proteasome, where they are unfolded and degraded to small peptides in an ATP-dependent process. PSMA1, PSMA2, PSMA3, PSMA4, PSMA5, PSMA6, PSMA7, PSMB1, PSMB2, PSMB3, PSMB4, PSMB5, PSMB6, PSMB7, PSMC3, PSMD14, RPN1, RPN2, UBE1, UBE2A, UBE3A 20 PSMA4(1), PSMA5(1), PSMB3(1), PSMB4(2), PSMC3(2), PSMD14(3), RPN1(1), UBE2A(2), UBE3A(6) 3460142 19 19 19 4 6 10 0 1 2 0 0.34 1.00 1.00 123 RECKPATHWAY RECK is a membrane-anchored inhibitor of matrix metalloproteinases, which are expressed by tumor cells and promote metastasis. HRAS, MMP14, MMP2, MMP9, RECK, TIMP1, TIMP2, TIMP3, TIMP4 9 HRAS(4), MMP14(2), MMP2(3), MMP9(6), RECK(3), TIMP2(1), TIMP4(1) 2007484 20 17 20 5 2 13 2 2 1 0 0.35 1.00 1.00 124 HSA00232_CAFFEINE_METABOLISM Genes involved in caffeine metabolism CYP1A2, CYP2A13, CYP2A6, CYP2A7, NAT1, NAT2, XDH 7 CYP1A2(1), CYP2A13(1), CYP2A6(5), CYP2A7(1), NAT2(2), XDH(10) 2127990 20 18 20 7 4 9 1 3 3 0 0.50 1.00 1.00 125 HSA00053_ASCORBATE_AND_ALDARATE_METABOLISM Genes involved in ascorbate and aldarate metabolism ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, MIOX, UGDH 9 ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH7A1(1), ALDH9A1(2), MIOX(1), UGDH(2) 2290148 12 12 12 4 5 6 0 0 1 0 0.53 1.00 1.00 126 IL6PATHWAY IL-6 binding to its receptor activates JAK kinases and a variety of transcription factors, with effects in neuronal differentiation, bone loss, and inflammation. CEBPB, CSNK2A1, ELK1, FOS, GRB2, HRAS, IL6, IL6R, IL6ST, JAK1, JAK2, JAK3, JUN, MAP2K1, MAPK3, PTPN11, RAF1, SHC1, SOS1, SRF, STAT3 21 CSNK2A1(3), FOS(2), HRAS(4), IL6(1), IL6R(1), IL6ST(1), JAK1(2), JAK2(4), JAK3(7), JUN(3), MAP2K1(2), MAPK3(1), PTPN11(3), RAF1(1), SHC1(2), SOS1(11), SRF(2), STAT3(2) 6405864 52 43 51 9 16 16 3 11 6 0 0.068 1.00 1.00 127 NUCLEOTIDE_METABOLISM ADSL, ADSS, DHFR, HPRT1, IMPDH1, MTHFD2, NME2, OAZ1, POLA, POLB, POLD1, POLG, PRPS2, RRM1, SAT, SRM 14 ADSL(1), ADSS(1), HPRT1(1), IMPDH1(2), MTHFD2(4), POLB(1), POLD1(2), POLG(2), PRPS2(1), RRM1(1) 3386628 16 14 16 3 4 5 0 6 1 0 0.28 1.00 1.00 128 EPONFKBPATHWAY The cytokine erythropoietin (Epo) prevents stress-induced neuronal apoptosis by stimulating anti-apoptotic pathways through JAK2 kinase and NF-kB. ARNT, CDKN1A, EPO, EPOR, GRIN1, HIF1A, JAK2, NFKB1, NFKBIA, RELA, SOD2 11 ARNT(1), CDKN1A(2), EPOR(2), GRIN1(1), HIF1A(1), JAK2(4), NFKB1(2), RELA(3), SOD2(1) 3407454 17 13 17 4 2 6 2 4 3 0 0.40 1.00 1.00 129 PHENYLALANINE_TYROSINE_AND_TRYPTOPHAN_BIOSYNTHESIS ENO1, ENO2, ENO3, FARS2, FARSLB, GOT1, GOT2, PAH, TAT, YARS 9 ENO2(1), ENO3(1), FARS2(2), GOT2(3), PAH(3), TAT(1), YARS(1) 2210582 12 11 12 4 3 5 0 3 1 0 0.58 1.00 1.00 130 SARSPATHWAY The SARS coronavirus has a 30kb RNA genome containing rep, a large gene encoding viral protease Mpro. ANPEP, CKM, EIF4E, FBL, GPT, LDHA, LDHB, LDHC, MAPK14, NCL 10 ANPEP(8), CKM(2), FBL(2), GPT(1), LDHB(3), LDHC(3), MAPK14(1), NCL(1) 2363662 21 19 21 5 6 9 1 3 2 0 0.36 1.00 1.00 131 P35ALZHEIMERSPATHWAY p35, a neuron-specific activator of cyclin-dependent kinase 5, is cleaved to p25 in Alzheimer's disease and promotoes hyperphosphorylated tau formation and apoptosis. APP, CAPN1, CAPNS1, CAPNS2, CDK5, CDK5R1, CSNK1A1, CSNK1D, GSK3B, MAPT, PPP2CA 11 APP(1), CAPN1(2), CAPNS2(1), CDK5(1), CDK5R1(1), CSNK1A1(2), CSNK1D(2), MAPT(4) 2547536 14 14 14 4 5 5 0 0 4 0 0.58 1.00 1.00 132 TRKAPATHWAY Nerve growth factor (NGF) promotes neuronal survival and proliferation by binding its receptor TrkA, which activates PI3K/AKT, Ras, and the MAP kinase pathway. AKT1, DPM2, GRB2, HRAS, KLK2, NGFB, NTRK1, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, SHC1, SOS1 11 AKT1(1), HRAS(4), KLK2(2), NTRK1(4), PIK3R1(2), PLCG1(3), PRKCA(5), SHC1(2), SOS1(11) 3562314 34 31 34 8 10 12 3 4 5 0 0.34 1.00 1.00 133 GANGLIOSIDE_BIOSYNTHESIS B3GALT4, GALGT, SIAT4A, SIAT4B, SIAT7B, SIAT7D, SIAT9, ST3GAL1, ST3GAL2, ST3GAL4, ST3GAL5, ST6GALNAC2, ST6GALNAC4, ST8SIA1 8 B3GALT4(1), ST3GAL1(4), ST3GAL4(2), ST3GAL5(2), ST6GALNAC4(1), ST8SIA1(3) 1515492 13 12 13 6 5 5 1 1 1 0 0.73 1.00 1.00 134 BIOSYNTHESIS_OF_STEROIDS DHCR7, FDFT1, FDPS, FDPS, LOC402397, HMGCR, IDI1, LSS, MVD, MVK, NQO1, NQO2, PMVK, SC5DL, SQLE, VKORC1 14 DHCR7(3), FDFT1(1), FDPS(1), HMGCR(1), IDI1(1), LSS(2), MVD(1), SC5DL(1), SQLE(3) 2981678 14 13 14 4 2 6 0 6 0 0 0.55 1.00 1.00 135 HSA00521_STREPTOMYCIN_BIOSYNTHESIS Genes involved in streptomycin biosynthesis GCK, HK1, HK2, HK3, IMPA1, IMPA2, ISYNA1, PGM1, PGM3, TGDS 10 GCK(5), HK1(3), HK2(5), HK3(5), IMPA1(2), PGM1(1), TGDS(1) 3131198 22 19 22 5 7 10 0 3 2 0 0.21 1.00 1.00 136 SULFUR_METABOLISM BPNT1, PAPSS1, PAPSS2, SULT1A2, SULT1A3, SULT1A3, SULT1A4, SULT1E1, SULT2A1, SUOX 7 BPNT1(1), PAPSS2(1), SULT1A2(2), SULT1E1(1), SULT2A1(3) 1626208 8 8 8 4 2 3 0 2 1 0 0.88 1.00 1.00 137 AMINOSUGARS_METABOLISM CMAS, CYB5R3, GCK, GFPT1, GNE, GNPDA1, GNPDA2, HEXA, HEXB, HK1, HK2, HK3, PGM3, RENBP, UAP1 15 CMAS(2), GCK(5), GFPT1(1), GNE(2), GNPDA2(4), HEXA(5), HK1(3), HK2(5), HK3(5), RENBP(2), UAP1(2) 4515504 36 28 36 8 9 16 0 5 6 0 0.20 1.00 1.00 138 RANPATHWAY RanGEF (aka RCC1) and RanGFP regulate the GTP- or GDP-bound state of Ran, creating a Ran gradient across the nuclear membrane that is used in nuclear import. CHC1, RAN, RANBP1, RANBP2, RANGAP1 4 RANBP2(14), RANGAP1(4) 2248318 18 16 18 5 4 5 2 4 3 0 0.82 1.00 1.00 139 NICOTINATE_AND_NICOTINAMIDE_METABOLISM AOX1, CD38, ENPP1, ENPP3, NADSYN1, NMNAT1, NMNAT2, NNMT, NNT, NP, NT5C, NT5E, NT5M, QPRT 13 AOX1(13), CD38(2), ENPP1(8), ENPP3(6), NADSYN1(7), NMNAT2(2), NNT(10), NT5E(2) 3894640 50 39 50 10 12 20 2 10 6 0 0.12 1.00 1.00 140 ST_IL_13_PATHWAY Like IL-4, IL-13 is produced by Th2 cells on activation of the T cell antigen receptor, and by mast and basophil cells on activation of the IgE receptor. IL13, IL13RA1, IL13RA2, IL4R, JAK1, JAK2, TYK2 7 IL13RA1(2), IL13RA2(1), IL4R(2), JAK1(2), JAK2(4), TYK2(8) 2804212 19 18 19 6 6 5 3 1 4 0 0.63 1.00 1.00 141 ST_INTERLEUKIN_13_PATHWAY IL-13 is produced by Th2 cells on activation of the T cell antigen receptor, and by mast and basophil cells on activation of the IgE receptor. IL13, IL13RA1, IL13RA2, IL4R, JAK1, JAK2, TYK2 7 IL13RA1(2), IL13RA2(1), IL4R(2), JAK1(2), JAK2(4), TYK2(8) 2804212 19 18 19 6 6 5 3 1 4 0 0.63 1.00 1.00 142 TIDPATHWAY On ligand binding, interferon gamma receptors stimulate JAK2 kinase to phosphorylate STAT transcription factors, which promote expression of interferon responsive genes. DNAJA3, HSPA1A, IFNG, IFNGR1, IFNGR2, IKBKB, JAK2, LIN7A, NFKB1, NFKBIA, RB1, RELA, TIP-1, TNF, TNFRSF1A, TNFRSF1B, TP53, USH1C, WT1 16 IFNG(1), IFNGR1(4), IFNGR2(1), IKBKB(2), JAK2(4), LIN7A(2), NFKB1(2), RELA(3), TNF(1), TNFRSF1A(2), TNFRSF1B(1), USH1C(7), WT1(4) 4211480 34 27 34 7 9 8 4 10 3 0 0.22 1.00 1.00 143 AKAP13PATHWAY A-kinase anchor protein 13 (AKAP13) localizes protein kinase A holoenzyme and is a nucleotide exchange factor for Rho/Rac. AKAP13, ARHA, EDG2, EDG4, EDG7, GNA12, PRKACB, PRKACG, PRKAG1, PRKAR2A, PRKAR2B 7 AKAP13(18), GNA12(2), PRKACB(3), PRKACG(1), PRKAR2B(2) 2708804 26 24 26 6 7 12 0 6 1 0 0.34 1.00 1.00 144 ST_INTERFERON_GAMMA_PATHWAY The interferon gamma pathway resembles the JAK-STAT pathway and activates STAT transcription factors. CISH, IFNG, IFNGR1, JAK1, JAK2, PLA2G2A, PTPRU, REG1A, STAT1, STATIP1 8 IFNG(1), IFNGR1(4), JAK1(2), JAK2(4), PLA2G2A(1), PTPRU(7), STAT1(2) 3003216 21 20 21 5 11 1 2 4 3 0 0.43 1.00 1.00 145 S1PPATHWAY At low cholesterol concentrations, sterol-regulatory element binding proteins (SREBPs) act as transcription factors to promote cholesterol uptake and biosynthesis. EPLIN, HMGCS1, LDLR, MBTPS1, MBTPS2, SCAP, SREBF1, SREBF2 7 HMGCS1(1), LDLR(4), MBTPS1(3), MBTPS2(3), SCAP(4), SREBF1(2), SREBF2(3) 3208272 20 19 20 5 9 5 1 4 1 0 0.33 1.00 1.00 146 ST_PAC1_RECEPTOR_PATHWAY The signaling peptide PACAP binds to its receptor, PAC1R, which activates adenylyl cyclase and phospholipase C. ASAH1, CAMP, DAG1, GAS, GNAQ, ITPKA, ITPKB, PACAP 6 DAG1(2), ITPKA(1), ITPKB(6) 1647212 9 9 9 5 3 3 1 1 1 0 0.85 1.00 1.00 147 PKCPATHWAY Gq-coupled receptors promote hydrolysis of PIP2 to DAG and IP3, which causes calcium influx and activates protein kinase C. GNAQ, NFKB1, NFKBIA, PLCB1, PRKCA, PRKCB1, RELA 6 NFKB1(2), PLCB1(8), PRKCA(5), RELA(3) 2193316 18 15 18 5 5 6 2 3 2 0 0.60 1.00 1.00 148 ATP_SYNTHESIS ATP5E, ATP5O, ATP6AP1, ATP6V0A1, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0C, SHMT1, ATP6V0D1, ATP6V0E, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H 21 ATP6V0A1(4), ATP6V0A4(3), ATP6V0D1(2), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(1), ATP6V1C1(1), ATP6V1C2(1), ATP6V1D(1), ATP6V1G2(1), ATP6V1G3(1), ATP6V1H(3) 4028318 25 23 25 7 6 4 2 6 7 0 0.50 1.00 1.00 149 FLAGELLAR_ASSEMBLY ATP5E, ATP5O, ATP6AP1, ATP6V0A1, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0C, SHMT1, ATP6V0D1, ATP6V0E, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H 21 ATP6V0A1(4), ATP6V0A4(3), ATP6V0D1(2), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(1), ATP6V1C1(1), ATP6V1C2(1), ATP6V1D(1), ATP6V1G2(1), ATP6V1G3(1), ATP6V1H(3) 4028318 25 23 25 7 6 4 2 6 7 0 0.50 1.00 1.00 150 TYPE_III_SECRETION_SYSTEM ATP5E, ATP5O, ATP6AP1, ATP6V0A1, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0C, SHMT1, ATP6V0D1, ATP6V0E, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H 21 ATP6V0A1(4), ATP6V0A4(3), ATP6V0D1(2), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(1), ATP6V1C1(1), ATP6V1C2(1), ATP6V1D(1), ATP6V1G2(1), ATP6V1G3(1), ATP6V1H(3) 4028318 25 23 25 7 6 4 2 6 7 0 0.50 1.00 1.00 151 SA_PTEN_PATHWAY PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. AKT1, AKT2, AKT3, BPNT1, GRB2, ILK, MAPK1, MAPK3, PDK1, PIK3CA, PIK3CD, PIP3-E, PTEN, PTK2B, RBL2, SHC1, SOS1 14 AKT1(1), AKT3(3), BPNT1(1), ILK(1), MAPK1(1), MAPK3(1), PDK1(1), PIK3CD(4), RBL2(7), SHC1(2), SOS1(11) 4637078 33 30 33 7 9 10 1 10 3 0 0.28 1.00 1.00 152 TALL1PATHWAY APRIL and BAFF bind to BCMA and TACI receptors on B cell surfaces, promoting immunoglobulin production and cell proliferation. CHUK, MAP3K14, MAPK14, MAPK8, NFKB1, RELA, TNFRSF13B, TNFRSF13C, TNFRSF17, TNFSF13, TNFSF13B, TRAF2, TRAF3, TRAF5, TRAF6 15 CHUK(2), MAP3K14(1), MAPK14(1), MAPK8(2), NFKB1(2), RELA(3), TNFRSF13B(1), TNFRSF17(1), TNFSF13(1), TRAF3(3), TRAF5(2), TRAF6(5) 3889122 24 21 24 8 6 5 1 5 7 0 0.73 1.00 1.00 153 ST_TYPE_I_INTERFERON_PATHWAY Type I interferon is an antiviral cytokine that induces a JAK-STAT type pathway leading to ISGF3 activation and a cellular antiviral response. IFNAR1, IFNB1, ISGF3G, JAK1, PTPRU, REG1A, STAT1, STAT2, TYK2 7 IFNAR1(2), IFNB1(2), JAK1(2), PTPRU(7), STAT1(2), STAT2(1), TYK2(8) 3264164 24 23 24 6 9 8 1 2 4 0 0.30 1.00 1.00 154 CTLA4PATHWAY T cell activation requires interaction with an antigen-MHC-I complex on an antigen-presenting cell (APC), as well as CD28 interaction with the APC's CD80 or 86. CD28, CD3D, CD3E, CD3G, CD3Z, CD80, CD86, CTLA4, GRB2, HLA-DRA, HLA-DRB1, ICOS, ICOSL, IL2, ITK, LCK, PIK3CA, PIK3R1, PTPN11, TRA@, TRB@ 16 CD3D(1), CD80(3), CD86(3), CTLA4(1), HLA-DRA(1), HLA-DRB1(2), ICOS(2), ITK(2), LCK(3), PIK3R1(2), PTPN11(3) 2818274 23 22 23 7 9 3 2 5 4 0 0.63 1.00 1.00 155 SETPATHWAY Cytotoxic T cells release perforin, which to allow entry into target cells of granzyme B, which activates caspases, and granzyme A, which induces caspase-independent apoptosis. ANP32A, APEX1, CREBBP, DFFA, DFFB, GZMA, GZMB, HMGB2, NME1, PRF1, SET 11 ANP32A(1), CREBBP(17), DFFB(2), GZMA(4), GZMB(1), HMGB2(1), PRF1(2) 2838388 28 25 28 9 5 10 2 7 4 0 0.62 1.00 1.00 156 AGPCRPATHWAY G-protein coupled receptors (GPCRs) transduce extracellular signals across the plasma membrane; attenuation occurs by signal molecule degradation or receptor-mediated endocytosis. ARRB1, GNAS, GNB1, GNGT1, GPRK2L, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1 11 ARRB1(2), GNAS(6), GNB1(1), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PRKCA(5) 2558750 24 23 24 9 9 6 1 5 3 0 0.85 1.00 1.00 157 NGFPATHWAY Nerve growth factor (NGF) stimulates neural survival and proliferation via the TrkA and p75 receptors, which induce DAG and IP3 production and activate Ras. CSNK2A1, DPM2, ELK1, FOS, GRB2, HRAS, JUN, KLK2, MAP2K1, MAPK3, MAPK8, NGFB, NGFR, PIK3CA, PIK3R1, PLCG1, RAF1, SHC1, SOS1 17 CSNK2A1(3), FOS(2), HRAS(4), JUN(3), KLK2(2), MAP2K1(2), MAPK3(1), MAPK8(2), NGFR(1), PIK3R1(2), PLCG1(3), RAF1(1), SHC1(2), SOS1(11) 4510164 39 34 38 8 16 13 2 6 2 0 0.19 1.00 1.00 158 GSPATHWAY Activated G-protein coupled receptors stimulate cAMP production and thus activate protein kinase A, involved in a number of signal transduction pathways. ADCY1, GNAS, GNB1, GNGT1, PRKACA, PRKAR1A 6 ADCY1(10), GNAS(6), GNB1(1), PRKAR1A(2) 1743866 19 18 19 7 6 5 2 5 1 0 0.77 1.00 1.00 159 GLUTATHIONE_METABOLISM ANPEP, G6PD, GCLC, GCLM, GGT1, GPX1, GPX2, GPX3, GPX4, GPX5, GSS, GSTA1, GSTA2, GSTA3, GSTA4, GSTM1, GSTM2, GSTM3, GSTM4, GSTM5, GSTO2, GSTP1, GSTT1, GSTT2, GSTZ1, IDH1, IDH2, MGST1, MGST2, MGST3, PGD 29 ANPEP(8), G6PD(1), GCLC(2), GCLM(1), GGT1(1), GPX5(2), GSS(2), GSTA1(3), GSTA2(2), GSTA4(1), GSTM3(1), GSTM4(3), GSTM5(3), GSTP1(1), GSTZ1(2), IDH1(2), MGST1(2), PGD(1) 4784818 38 35 38 8 8 22 1 6 1 0 0.092 1.00 1.00 160 FATTY_ACID_BIOSYNTHESIS_PATH_2 ACAA1, ACAA2, ACAT1, ACAT2, ECHS1, EHHADH, HADHA, HADHB, SDS 9 ACAA1(1), ACAA2(1), ACAT1(2), ECHS1(1), EHHADH(1), HADHA(2), HADHB(3), SDS(2) 2216812 13 13 13 7 3 4 1 3 2 0 0.93 1.00 1.00 161 ANDROGEN_AND_ESTROGEN_METABOLISM AKR1C4, AKR1D1, ARSB, ARSD, ARSE, CYP11B1, CYP11B2, HSD11B1, HSD11B2, HSD17B2, HSD17B3, HSD17B8, HSD3B1, HSD3B2, SRD5A1, SRD5A2, STS, SULT1E1, SULT2A1, UGT1A10, UGT1A10, UGT1A8, UGT1A7, UGT1A6, UGT1A5, UGT1A9, UGT1A4, UGT1A1, UGT1A3, UGT1A6, UGT1A8, UGT1A9, UGT2B15, UGT2B4 29 AKR1C4(1), AKR1D1(4), ARSB(1), ARSD(1), ARSE(2), CYP11B2(7), HSD11B1(3), HSD11B2(1), HSD3B1(5), HSD3B2(3), SRD5A1(2), SRD5A2(2), STS(6), SULT1E1(1), SULT2A1(3), UGT1A1(1), UGT1A10(2), UGT1A3(1), UGT1A4(1), UGT1A5(3), UGT1A6(1), UGT1A7(2), UGT1A8(4), UGT1A9(3), UGT2B15(3), UGT2B4(8) 7068558 71 53 71 14 14 25 4 21 7 0 0.053 1.00 1.00 162 INFLAMPATHWAY Interleukins and TNF serve as signals to coordinate the inflammatory response, in which macrophages recruit and activate neutrophils, fibroblasts, and T cells. CD4, CSF1, CSF2, CSF3, HLA-DRA, HLA-DRB1, IFNA1, IFNB1, IFNG, IL10, IL11, IL12A, IL12B, IL13, IL15, IL1A, IL2, IL3, IL4, IL5, IL6, IL7, IL8, LTA, PDGFA, TGFB1, TGFB2, TGFB3, TNF 28 CD4(1), CSF1(2), HLA-DRA(1), HLA-DRB1(2), IFNA1(1), IFNB1(2), IFNG(1), IL10(2), IL12A(1), IL12B(3), IL1A(1), IL3(1), IL4(2), IL6(1), IL7(1), LTA(2), TGFB1(1), TGFB2(3), TNF(1) 3533122 29 26 29 8 9 9 1 6 4 0 0.37 1.00 1.00 163 CHONDROITIN B3GAT3, B4GALT7, HS3ST1, HS3ST2, HS3ST3A1, HS3ST3B1, XYLT1, XYLT2 8 HS3ST2(2), HS3ST3A1(1), XYLT1(5) 1790680 8 7 8 4 1 5 0 2 0 0 0.74 1.00 1.00 164 HEPARAN_SULFATE_BIOSYNTHESIS B3GAT3, B4GALT7, HS3ST1, HS3ST2, HS3ST3A1, HS3ST3B1, XYLT1, XYLT2 8 HS3ST2(2), HS3ST3A1(1), XYLT1(5) 1790680 8 7 8 4 1 5 0 2 0 0 0.74 1.00 1.00 165 LEPTINPATHWAY Leptin is a peptide secreted by adipose tissue that, in skeletal muscle, promotes fatty acid oxidation, decreases cells' lipid content, and promotes insulin sensitivity. ACACA, CPT1A, LEP, LEPR, PRKAA1, PRKAA2, PRKAB1, PRKAB2, PRKAG1, PRKAG2 10 ACACA(2), CPT1A(5), LEPR(15), PRKAA2(5), PRKAB2(1), PRKAG2(4) 3865270 32 28 32 7 6 10 4 7 5 0 0.35 1.00 1.00 166 PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS AKR1B1, DCXR, GUSB, RPE, RPE, LOC440001, UCHL1, UCHL3, UGDH, UGT1A10, UGT1A10, UGT1A8, UGT1A7, UGT1A6, UGT1A5, UGT1A9, UGT1A4, UGT1A1, UGT1A3, UGT1A6, UGT1A8, UGT1A9, UGT2B15, UGT2B4 18 AKR1B1(1), GUSB(2), UCHL3(1), UGDH(2), UGT1A1(1), UGT1A10(2), UGT1A3(1), UGT1A4(1), UGT1A5(3), UGT1A6(1), UGT1A7(2), UGT1A8(4), UGT1A9(3), UGT2B15(3), UGT2B4(8) 4733732 35 30 35 8 4 15 4 11 1 0 0.31 1.00 1.00 167 PHOTOSYNTHESIS ATP5E, ATP5O, ATP6AP1, ATP6V0A1, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0C, SHMT1, ATP6V0D1, ATP6V0E, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H, FDXR 22 ATP6V0A1(4), ATP6V0A4(3), ATP6V0D1(2), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(1), ATP6V1C1(1), ATP6V1C2(1), ATP6V1D(1), ATP6V1G2(1), ATP6V1G3(1), ATP6V1H(3), FDXR(2) 4288020 27 25 27 7 7 5 2 6 7 0 0.40 1.00 1.00 168 UBIQUITIN_MEDIATED_PROTEOLYSIS CDC34, HIP2, NRF1, UBE1, UBE2A, UBE2B, UBE2C, UBE2D1, UBE2D2, UBE2D3, UBE2E1, UBE2E3, UBE2G1, UBE2G2, UBE2G2, TAX1BP3, UBE2H, UBE2I, UBE2J1, UBE2J2, UBE2L3, UBE2L6, UBE2M, UBE2N, UBE2S, UBE3A 23 UBE2A(2), UBE2C(1), UBE2D1(1), UBE2D2(2), UBE2E3(2), UBE2G1(1), UBE2G2(1), UBE2J1(2), UBE2L6(1), UBE2M(1), UBE3A(6) 2812044 20 19 20 6 5 9 0 3 3 0 0.64 1.00 1.00 169 ATMPATHWAY The tumor-suppressing protein kinase ATM responds to radiation-induced DNA damage by blocking cell-cycle progression and activating DNA repair. ABL1, ATM, BRCA1, CDKN1A, CHEK1, CHEK2, GADD45A, JUN, MAPK8, MDM2, MRE11A, NBS1, NFKB1, NFKBIA, RAD50, RAD51, RBBP8, RELA, TP53, TP73 18 ABL1(3), ATM(8), BRCA1(12), CDKN1A(2), CHEK1(5), CHEK2(3), GADD45A(1), JUN(3), MAPK8(2), MDM2(2), MRE11A(1), NFKB1(2), RAD50(3), RAD51(1), RBBP8(1), RELA(3) 7765250 52 40 51 7 19 13 2 10 8 0 0.061 1.00 1.00 170 SRCRPTPPATHWAY Activation of Src by Protein-tyrosine phosphatase alpha CCNB1, CDC2, CDC25A, CDC25B, CDC25C, CSK, GRB2, PRKCA, PRKCB1, PTPRA, SRC 9 CCNB1(2), CDC25B(2), CDC25C(1), PRKCA(5) 2455154 10 10 10 4 3 2 2 1 2 0 0.83 1.00 1.00 171 TOB1PATHWAY TGF-beta signaling activates SMADs, which interact with intracellular Tob to maintain unstimulated T cells by repressing IL-2 expression. CD28, CD3D, CD3E, CD3G, CD3Z, IFNG, IL2, IL2RA, IL4, MADH3, MADH4, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, TGFBR3, TOB1, TOB2, TRA@, TRB@ 16 CD3D(1), IFNG(1), IL4(2), TGFB1(1), TGFB2(3), TGFBR2(3), TGFBR3(8) 2835718 19 17 19 9 7 5 0 4 3 0 0.88 1.00 1.00 172 HSA03060_PROTEIN_EXPORT Genes involved in protein export OXA1L, SEC61A2, SRP19, SRP54, SRP68, SRP72, SRP9, SRPR 8 OXA1L(2), SEC61A2(1), SRP54(1), SRP72(2), SRPR(2) 1998228 8 8 8 3 2 3 2 1 0 0 0.81 1.00 1.00 173 ERBB3PATHWAY Neuregulins bind to the receptor tyrosine kinases ErbB3 and ErbB4, surface-localized receptors whose overexpression induces tumor formation. EGF, EGFR, ERBB3, NRG1, UBE2D1 5 EGF(6), EGFR(7), ERBB3(4), NRG1(3), UBE2D1(1) 2755796 21 19 20 6 5 7 0 6 3 0 0.53 1.00 1.00 174 IFNAPATHWAY Interferon alpha, active in the immune response, binds to the IFN receptor and activates Jak1 and Tyk2, which phosphorylate Stat1 and Stat2. IFNA1, IFNAR1, IFNAR2, IFNB1, ISGF3G, JAK1, STAT1, STAT2, TYK2 8 IFNA1(1), IFNAR1(2), IFNB1(2), JAK1(2), STAT1(2), STAT2(1), TYK2(8) 2901578 18 18 18 6 6 7 1 1 3 0 0.61 1.00 1.00 175 SELENOAMINO_ACID_METABOLISM AHCY, CBS, CTH, GGT1, MARS, MARS2, MAT1A, MAT2B, PAPSS1, PAPSS2, SCLY, SEPHS1 12 AHCY(1), CBS(4), GGT1(1), MARS(1), MAT1A(1), PAPSS2(1), SCLY(1), SEPHS1(3) 3302078 13 11 13 7 4 5 0 0 4 0 0.87 1.00 1.00 176 SALMONELLAPATHWAY Salmonella induces membrane ruffling in infected cells via bacterial proteins including SipA, SipC, and SopE, which alter actin structure. ACTA1, ACTR2, ACTR3, ARPC1A, ARPC1B, ARPC2, ARPC3, ARPC4, CDC42, RAC1, WASF1, WASL 12 ACTA1(3), ARPC1A(4), CDC42(1), RAC1(1), WASF1(1), WASL(2) 2167862 12 12 11 8 5 5 0 1 1 0 0.98 1.00 1.00 177 D4GDIPATHWAY D4-GDI inhibits the pro-apoptotic Rho GTPases and is cleaved by caspase-3. ADPRT, APAF1, ARHGAP5, ARHGDIB, CASP1, CASP10, CASP3, CASP8, CASP9, CYCS, GZMB, JUN, PRF1 12 APAF1(4), ARHGAP5(2), ARHGDIB(2), CASP1(1), CASP10(3), CASP8(2), CASP9(3), GZMB(1), JUN(3), PRF1(2) 3437714 23 18 21 9 10 3 1 5 4 0 0.87 1.00 1.00 178 CTLPATHWAY Cytotoxic T lymphocytes induce apoptosis in infected cells presenting antigen-MHC-I complexes via the perforin and Fas/Fas ligand pathways. B2M, CD3D, CD3E, CD3G, CD3Z, GZMB, HLA-A, ICAM1, ITGAL, ITGB2, PRF1, TNFRSF6, TNFSF6, TRA@, TRB@ 9 B2M(2), CD3D(1), GZMB(1), ICAM1(2), ITGAL(1), ITGB2(5), PRF1(2) 2136534 14 14 14 7 3 5 0 5 1 0 0.80 1.00 1.00 179 HSA00400_PHENYLALANINE_TYROSINE_AND_TRYPTOPHAN_BIOSYNTHESIS Genes involved in phenylalanine, tyrosine and tryptophan biosynthesis FARS2, FARSA, FARSB, GOT1, GOT2, PAH, TAT, YARS, YARS2 9 FARS2(2), FARSA(5), GOT2(3), PAH(3), TAT(1), YARS(1), YARS2(2) 2328418 17 15 17 6 4 9 0 3 1 0 0.62 1.00 1.00 180 IL3PATHWAY IL-3 promotes proliferation and differentiation of hematopoietic cells via a heterodimeric receptor that activates the Stat5 and MAP kinase pathways. CSF2RB, FOS, GRB2, HRAS, IL3, IL3RA, JAK2, MAP2K1, MAPK3, PTPN6, RAF1, SHC1, SOS1, STAT5A, STAT5B 15 CSF2RB(5), FOS(2), HRAS(4), IL3(1), JAK2(4), MAP2K1(2), MAPK3(1), RAF1(1), SHC1(2), SOS1(11), STAT5A(2) 4723942 35 32 35 8 7 14 3 7 4 0 0.26 1.00 1.00 181 PTC1PATHWAY The binding of extracellular signaling protein Sonic hedgehog to the Patched receptor (Ptc1) allows progression through G1 and may inhibit the G2/M transition. CCNB1, CCNH, CDC2, CDC25A, CDC25B, CDC25C, CDK7, MNAT1, PTCH, SHH, XPO1 9 CCNB1(2), CDC25B(2), CDC25C(1), CDK7(1), SHH(2), XPO1(2) 2359034 10 10 10 4 2 2 1 4 1 0 0.86 1.00 1.00 182 IL4PATHWAY IL-4 promotes Th2 cell differentiation via a heterodimeric receptor that activates Stat6/JAK and MAP kinase pathways. AKT1, GRB2, IL2RG, IL4, IL4R, IRS1, JAK1, JAK3, RPS6KB1, SHC1, STAT6 11 AKT1(1), IL2RG(1), IL4(2), IL4R(2), IRS1(6), JAK1(2), JAK3(7), RPS6KB1(1), SHC1(2), STAT6(2) 3963348 26 22 26 7 5 11 1 5 4 0 0.37 1.00 1.00 183 PLCPATHWAY Phospholipase C hydrolyzes the membrane lipid PIP2 to DAG, which activates protein kinase C, and IP3, which causes calcium influx. AKT1, PIK3CA, PIK3R1, PLCB1, PLCG1, PRKCA, PRKCB1, VAV1 6 AKT1(1), PIK3R1(2), PLCB1(8), PLCG1(3), PRKCA(5), VAV1(7) 2806882 26 25 26 7 12 9 2 2 1 0 0.49 1.00 1.00 184 ST_G_ALPHA_S_PATHWAY The G-alpha-s protein activates adenylyl cyclases, which catalyze cAMP formation. ASAH1, BF, BFAR, BRAF, CAMP, CREB1, CREB3, CREB5, EPAC, GAS, GRF2, MAPK1, RAF1, SNX13, SRC, TERF2IP 12 BRAF(8), CREB1(1), CREB3(2), CREB5(3), MAPK1(1), RAF1(1), SNX13(5) 3061778 21 19 21 7 8 6 1 3 3 0 0.72 1.00 1.00 185 PROTEASOME PSMA1, PSMA2, PSMA3, PSMA4, PSMA5, PSMA6, PSMA7, PSMB1, PSMB10, PSMB2, PSMB3, PSMB4, PSMB5, PSMB6, PSMB7, PSMB8, PSMB9 17 PSMA4(1), PSMA5(1), PSMB3(1), PSMB4(2), PSMB8(2) 2332334 7 7 7 3 4 2 0 0 1 0 0.80 1.00 1.00 186 LONGEVITYPATHWAY Caloric restriction in animals often increases lifespan, which may occur via decreased IGF receptor expression and consequent expression of stress-resistance proteins. AKT1, CAT, FOXO3A, GH1, GHR, HRAS, IGF1, IGF1R, PIK3CA, PIK3R1, SHC1, SOD1, SOD2, SOD3 12 AKT1(1), GH1(2), GHR(3), HRAS(4), IGF1(3), IGF1R(1), PIK3R1(2), SHC1(2), SOD2(1) 2931660 19 17 19 5 6 10 2 1 0 0 0.39 1.00 1.00 187 MITOCHONDRIAPATHWAY Pro-apoptotic signaling induces mitochondria to release cytochrome c, which stimulates Apaf-1 to activate caspase 9. APAF1, BAK1, BAX, BCL2, BCL2L1, BID, BIK, BIRC2, BIRC3, BIRC4, CASP3, CASP6, CASP7, CASP8, CASP9, CYCS, DFFA, DFFB, DIABLO, ENDOG, PDCD8 19 APAF1(4), BAK1(1), BAX(1), BCL2L1(1), BIRC2(1), BIRC3(3), CASP7(2), CASP8(2), CASP9(3), DFFB(2) 3649000 20 17 19 6 6 4 1 5 4 0 0.70 1.00 1.00 188 FIBRINOLYSISPATHWAY Thrombin cleavage of fibrinogen results in rapid formation of fibrin threads that form a mesh to capture platelets and other blood cells into a clot. CPB2, F13A1, F2, F2R, FGA, FGB, FGG, PLAT, PLAU, PLG, SERPINB2, SERPINE1 12 CPB2(3), F13A1(5), F2R(2), FGA(5), FGB(4), FGG(2), PLAT(1), PLAU(2), PLG(2), SERPINB2(4) 3577800 30 25 30 8 6 10 4 6 4 0 0.51 1.00 1.00 189 EPOPATHWAY Erythropoietin, which activates the MAPK pathway, stimulates erythrocyte production and is an effective treatment for anemia. CSNK2A1, ELK1, EPO, EPOR, FOS, GRB2, HRAS, JAK2, JUN, MAP2K1, MAPK3, MAPK8, PLCG1, PTPN6, RAF1, SHC1, SOS1, STAT5A, STAT5B 19 CSNK2A1(3), EPOR(2), FOS(2), HRAS(4), JAK2(4), JUN(3), MAP2K1(2), MAPK3(1), MAPK8(2), PLCG1(3), RAF1(1), SHC1(2), SOS1(11), STAT5A(2) 5746908 42 35 41 9 14 13 3 8 4 0 0.19 1.00 1.00 190 MRPPATHWAY Cancer cells resistant to numerous drugs are called multidrug-resistant (MDR) and express ATP-binding cassette transporter proteins that pump the drugs out of cells. ABCB1, ABCB11, ABCB4, ABCC1, ABCC3, GSTP1 6 ABCB1(17), ABCB11(6), ABCB4(7), ABCC1(5), ABCC3(3), GSTP1(1) 3832518 39 27 39 10 14 13 5 5 1 1 0.19 1.00 1.00 191 DNAFRAGMENTPATHWAY DNA fragmentation during apoptosis is effected by DFF, a caspase-activated DNAse, and by endonuclease G. CASP3, CASP7, DFFA, DFFB, ENDOG, GZMB, HMGB1, HMGB2, TOP2A, TOP2B 10 CASP7(2), DFFB(2), GZMB(1), HMGB2(1), TOP2A(2), TOP2B(4) 2569430 12 11 12 6 3 4 2 2 1 0 0.96 1.00 1.00 192 CDK5PATHWAY Cdk5, a regulatory kinase implicated in neuronal development, represses Mek1, which downregulates the MAP kinase pathway. CDK5, CDK5R1, DPM2, EGR1, HRAS, KLK2, MAP2K1, MAP2K2, MAPK1, MAPK3, NGFB, NGFR, RAF1 12 CDK5(1), CDK5R1(1), EGR1(2), HRAS(4), KLK2(2), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK3(1), NGFR(1), RAF1(1) 2221262 17 17 17 6 5 8 1 3 0 0 0.52 1.00 1.00 193 LIMONENE_AND_PINENE_DEGRADATION ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, ECHS1, EHHADH, HADHA, SDS 12 ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH9A1(2), ECHS1(1), EHHADH(1), HADHA(2), SDS(2) 3248678 18 16 18 8 4 9 1 1 3 0 0.78 1.00 1.00 194 EIF2PATHWAY Eukaryotic initiation factor 2 (EIF2) initiates translation by transferring Met-tRNA to the 40S ribosome in a GTP-dependent process. EIF2AK3, EIF2AK4, EIF2B5, EIF2S1, EIF2S2, EIF2S3, EIF5, GSK3B, HRI, PPP1CA, PRKR 9 EIF2AK3(8), EIF2AK4(7), EIF2B5(3), EIF2S2(1), EIF5(3) 3106812 22 21 22 7 9 8 0 3 2 0 0.68 1.00 1.00 195 HSA00920_SULFUR_METABOLISM Genes involved in sulfur metabolism BPNT1, CHST11, CHST12, CHST13, PAPSS1, PAPSS2, SULT1A1, SULT1A2, SULT1A3, SULT1A4, SULT1E1, SULT2A1, SULT2B1, SUOX 12 BPNT1(1), CHST11(2), CHST12(1), PAPSS2(1), SULT1A1(2), SULT1A2(2), SULT1E1(1), SULT2A1(3) 2467258 13 13 13 6 2 5 0 5 1 0 0.83 1.00 1.00 196 KREBPATHWAY The Krebs (citric acid) cycle takes place in mitochondria, where it extracts energy in the form of electron carriers NADH and FADH2, which drive the electron transport chain. ACO2, CS, FH, IDH2, MDH1, OGDH, SDHA, SUCLA2 8 ACO2(3), FH(2), MDH1(1), OGDH(3), SDHA(3), SUCLA2(2) 2500188 14 14 14 7 3 6 1 3 1 0 0.88 1.00 1.00 197 VALINE_LEUCINE_AND_ISOLEUCINE_BIOSYNTHESIS BCAT1, IARS, LARS, LARS2, PDHA1, PDHA2, PDHB 7 BCAT1(1), IARS(3), LARS(1), LARS2(3), PDHA1(3), PDHA2(8) 2675874 19 17 19 7 4 7 2 5 1 0 0.81 1.00 1.00 198 DNA_POLYMERASE POLA, POLB, POLD1, POLD2, POLE, POLG, POLL, POLQ, POLS 7 POLB(1), POLD1(2), POLD2(1), POLE(7), POLG(2), POLL(2), POLQ(18) 4461926 33 27 33 7 11 12 1 7 2 0 0.18 1.00 1.00 199 CD40PATHWAY The CD40 receptor is a TNF-type receptor that regulates immunoglobulin expression in B cells and moderates T cell activation via T-cell expression of its ligand. CHUK, DUSP1, IKBKAP, IKBKB, IKBKG, MAP3K1, MAP3K14, NFKB1, NFKBIA, RELA, TNFAIP3, TNFRSF5, TNFSF5, TRAF3, TRAF6 12 CHUK(2), IKBKAP(4), IKBKB(2), MAP3K1(3), MAP3K14(1), NFKB1(2), RELA(3), TNFAIP3(5), TRAF3(3), TRAF6(5) 4832344 30 26 30 7 5 10 1 8 6 0 0.40 1.00 1.00 200 PELP1PATHWAY Pelp1 acts downstream of activated estrogen receptor to promote cell proliferation and is overexpressed in many breast tumors. CREBBP, EP300, ESR1, MAPK1, MAPK3, PELP1, SRC 7 CREBBP(17), EP300(9), ESR1(6), MAPK1(1), MAPK3(1) 3931486 34 29 33 9 5 11 2 12 4 0 0.46 1.00 1.00 201 AKTPATHWAY Second messenger PIP3 promotes cell survival by activating the anti-apoptotic kinase AKT. AKT1, BAD, CASP9, CHUK, FOXO1A, FOXO3A, GH1, GHR, HSPCA, MLLT7, NFKB1, NFKBIA, PDPK1, PIK3CA, PIK3R1, PPP2CA, RELA, TNFSF6, YWHAH 13 AKT1(1), CASP9(3), CHUK(2), GH1(2), GHR(3), NFKB1(2), PDPK1(1), PIK3R1(2), RELA(3) 3146506 19 16 18 9 8 3 3 3 2 0 0.92 1.00 1.00 202 TPOPATHWAY Thrombopoietin binds to its receptor and activates cell growth through the Erk and JNK MAP kinase pathways, protein kinase C, and JAK/STAT activation. CSNK2A1, FOS, GRB2, HRAS, JAK2, JUN, MAP2K1, MAPK3, MPL, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, RAF1, RASA1, SHC1, SOS1, STAT1, STAT3, STAT5A, STAT5B, THPO 21 CSNK2A1(3), FOS(2), HRAS(4), JAK2(4), JUN(3), MAP2K1(2), MAPK3(1), MPL(2), PIK3R1(2), PLCG1(3), PRKCA(5), RAF1(1), RASA1(8), SHC1(2), SOS1(11), STAT1(2), STAT3(2), STAT5A(2) 7409962 59 49 58 10 19 14 5 9 12 0 0.083 1.00 1.00 203 CACAMPATHWAY Calcium functions as a second messenger activating the calcium/calmodulin-dependent kinases, which phosphorylate targets such as CREB. CALM1, CALM2, CALM3, CAMK1, CAMK1G, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CAMK4, CAMKK1, CAMKK2, CREB1, SYT1 14 CALM2(1), CAMK1G(3), CAMK2A(1), CAMK2B(2), CAMK2D(1), CAMK4(3), CAMKK2(1), CREB1(1), SYT1(4) 3108592 17 16 17 9 3 6 4 2 2 0 0.95 1.00 1.00 204 HSA01040_POLYUNSATURATED_FATTY_ACID_BIOSYNTHESIS Genes involved in polyunsaturated fatty acid biosynthesis ACAA1, ACOX1, ACOX3, ELOVL2, ELOVL5, ELOVL6, FADS1, FADS2, FASN, GPSN2, HADHA, HSD17B12, PECR, SCD 13 ACAA1(1), ACOX1(2), ACOX3(5), ELOVL5(2), ELOVL6(1), FADS1(1), FADS2(1), FASN(2), HADHA(2), HSD17B12(2), PECR(1), SCD(1) 3850318 21 18 21 9 4 8 3 2 4 0 0.68 1.00 1.00 205 IL10PATHWAY The cytokine IL-10 inhibits the inflammatory response by macrophages via activation of heme oxygenase 1. BLVRA, BLVRB, HMOX1, IL10, IL10RA, IL10RB, IL1A, IL6, JAK1, STAT1, STAT3, STAT5A, TNF 13 BLVRA(2), IL10(2), IL10RA(2), IL1A(1), IL6(1), JAK1(2), STAT1(2), STAT3(2), STAT5A(2), TNF(1) 3264164 17 16 17 8 6 6 1 2 2 0 0.80 1.00 1.00 206 PTENPATHWAY PTEN suppresses AKT-induced cell proliferation and antagonizes the action of PI3K. AKT1, BCAR1, CDKN1B, FOXO3A, GRB2, ILK, ITGB1, MAPK1, MAPK3, PDK2, PDPK1, PIK3CA, PIK3R1, PTEN, PTK2, SHC1, SOS1, TNFSF6 14 AKT1(1), BCAR1(6), ILK(1), ITGB1(5), MAPK1(1), MAPK3(1), PDK2(2), PDPK1(1), PIK3R1(2), PTK2(6), SHC1(2), SOS1(11) 4360644 39 34 39 9 10 13 2 11 3 0 0.33 1.00 1.00 207 MITOCHONDRIAL_FATTY_ACID_BETAOXIDATION ACADL, ACADM, ACADS, ACADVL, ACSL1, ACSL3, ACSL4, CPT1A, CPT2, DCI, EHHADH, HADHA, HADHSC, MGC5139, PECR, SCP2, SLC25A20 15 ACADL(2), ACADM(1), ACADS(2), ACADVL(1), ACSL1(2), ACSL3(2), ACSL4(2), CPT1A(5), CPT2(2), DCI(1), EHHADH(1), HADHA(2), PECR(1), SCP2(1), SLC25A20(1) 4472962 26 26 26 7 4 7 2 8 5 0 0.49 1.00 1.00 208 SMALL_LIGAND_GPCRS C9orf47, CNR1, CNR2, DNMT1, EDG1, EDG2, EDG5, EDG6, MTNR1A, MTNR1B, PTAFR, PTGDR, PTGER1, PTGER2, PTGER4, PTGFR, PTGIR, TBXA2R 12 CNR1(5), CNR2(2), DNMT1(4), MTNR1A(1), PTAFR(3), PTGDR(5), PTGER2(2), PTGER4(2), PTGFR(5), PTGIR(1), TBXA2R(2) 2834294 32 31 32 10 6 12 3 10 1 0 0.42 1.00 1.00 209 CDC42RACPATHWAY PI3 kinase stimulates cell migration by activating cdc42, which activates ARP2/3, which in turn promotes formation of new actin fibers. ACTR2, ACTR3, ARHA, ARPC1A, ARPC1B, ARPC2, ARPC3, ARPC4, CDC42, PAK1, PDGFRA, PIK3CA, PIK3R1, RAC1, WASL 13 ARPC1A(4), CDC42(1), PAK1(2), PDGFRA(10), PIK3R1(2), RAC1(1), WASL(2) 2992002 22 20 21 6 11 7 1 3 0 0 0.55 1.00 1.00 210 SA_PROGRAMMED_CELL_DEATH Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. APAF1, BAD, BAK1, BAX, BCL10, BCL2, BCL2L1, BCL2L11, BID, CASP8AP2, CASP9, CES1 12 APAF1(4), BAK1(1), BAX(1), BCL2L1(1), CASP8AP2(6), CASP9(3), CES1(2) 3046114 18 14 17 5 6 3 2 6 1 0 0.70 1.00 1.00 211 MONOCYTEPATHWAY Monocytes are a class of immune phagocytes that can develop into macrophages and express LFA-1, CD44, and other surface signaling proteins. CD44, ICAM1, ITGA4, ITGAL, ITGAM, ITGB1, ITGB2, PECAM1, SELE, SELL, SELP 11 CD44(5), ICAM1(2), ITGA4(4), ITGAL(1), ITGAM(7), ITGB1(5), ITGB2(5), SELE(4), SELL(2), SELP(11) 4296920 46 32 46 10 11 17 2 11 5 0 0.18 1.00 1.00 212 G1PATHWAY CDK4/6-cyclin D and CDK2-cyclin E phosphorylate Rb, which allows the transcription of genes needed for the G1/S cell cycle transition. ABL1, ATM, ATR, CCNA1, CCND1, CCNE1, CDC2, CDC25A, CDK2, CDK4, CDK6, CDKN1A, CDKN1B, CDKN2A, CDKN2B, DHFR, E2F1, GSK3B, HDAC1, MADH3, MADH4, RB1, SKP2, TFDP1, TGFB1, TGFB2, TGFB3, TP53 22 ABL1(3), ATM(8), ATR(13), CCNA1(1), CCND1(1), CCNE1(3), CDKN1A(2), CDKN2B(1), E2F1(2), HDAC1(2), SKP2(2), TFDP1(3), TGFB1(1), TGFB2(3) 7251364 45 36 45 8 14 19 3 5 4 0 0.13 1.00 1.00 213 HSA00480_GLUTATHIONE_METABOLISM Genes involved in glutathione metabolism ANPEP, G6PD, GCLC, GCLM, GGT1, GGTL3, GGTL4, GPX1, GPX2, GPX3, GPX4, GPX5, GPX6, GPX7, GSR, GSS, GSTA1, GSTA2, GSTA3, GSTA4, GSTA5, GSTK1, GSTM1, GSTM2, GSTM3, GSTM4, GSTM5, GSTO2, GSTP1, GSTT1, GSTT2, GSTZ1, IDH1, IDH2, MGST1, MGST2, MGST3, OPLAH, TXNDC12 35 ANPEP(8), G6PD(1), GCLC(2), GCLM(1), GGT1(1), GPX5(2), GPX6(2), GSR(4), GSS(2), GSTA1(3), GSTA2(2), GSTA4(1), GSTA5(2), GSTM3(1), GSTM4(3), GSTM5(3), GSTP1(1), GSTZ1(2), IDH1(2), MGST1(2), OPLAH(5) 5776278 50 46 50 11 11 27 0 10 2 0 0.074 1.00 1.00 214 G2PATHWAY Activated Cdc2-cyclin B kinase regulates the G2/M transition; DNA damage stimulates the DNA-PK/ATM/ATR kinases, which inactivate Cdc2. ATM, ATR, BRCA1, CCNB1, CDC2, CDC25A, CDC25B, CDC25C, CDC34, CDKN1A, CDKN2D, CHEK1, CHEK2, EP300, GADD45A, MDM2, MYT1, PLK, PRKDC, RPS6KA1, TP53, WEE1, YWHAH, YWHAQ 21 ATM(8), ATR(13), BRCA1(12), CCNB1(2), CDC25B(2), CDC25C(1), CDKN1A(2), CHEK1(5), CHEK2(3), EP300(9), GADD45A(1), MDM2(2), MYT1(4), PRKDC(12), RPS6KA1(2), WEE1(4), YWHAQ(1) 11145826 83 61 82 11 23 28 6 15 11 0 0.015 1.00 1.00 215 RASPATHWAY Ras activation stimulates many signaling cascades, including PI3K/AKT activation to inhibit apoptosis. AKT1, ARHA, BAD, BCL2L1, CASP9, CDC42, CHUK, ELK1, H2AFX, HRAS, MAP2K1, MAPK3, MLLT7, NFKB1, PIK3CA, PIK3R1, RAC1, RAF1, RALA, RALBP1, RALGDS, RELA, RHOA 20 AKT1(1), BCL2L1(1), CASP9(3), CDC42(1), CHUK(2), H2AFX(1), HRAS(4), MAP2K1(2), MAPK3(1), NFKB1(2), PIK3R1(2), RAC1(1), RAF1(1), RALA(3), RALBP1(1), RALGDS(1), RELA(3) 4513012 30 26 29 8 11 7 2 7 3 0 0.41 1.00 1.00 216 HSA04140_REGULATION_OF_AUTOPHAGY Genes involved in regulation of autophagy ATG12, ATG3, ATG5, ATG7, BECN1, GABARAP, GABARAPL1, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, IFNG, INS, LOC441925, PIK3C3, PIK3R4, PRKAA1, PRKAA2, ULK1, ULK2, ULK3 28 ATG12(1), ATG3(2), ATG7(6), BECN1(2), GABARAP(1), IFNA1(1), IFNA14(2), IFNA16(2), IFNA17(1), IFNA4(1), IFNA6(1), IFNA7(1), IFNA8(2), IFNG(1), PIK3C3(5), PIK3R4(7), PRKAA2(5), ULK1(4), ULK2(5) 5568730 50 43 50 10 21 11 4 6 8 0 0.20 1.00 1.00 217 HSA00641_3_CHLOROACRYLIC_ACID_DEGRADATION Genes involved in 3-chloroacrylic acid degradation ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1 15 ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH5(1), ADH7(1), ADHFE1(2), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH7A1(1), ALDH9A1(2) 3563382 19 19 19 7 5 12 0 1 1 0 0.65 1.00 1.00 218 NDKDYNAMINPATHWAY Endocytotic role of NDK, Phosphins and Dynamin AMPH, AP2A1, AP2M1, BIN1, CALM1, CALM2, CALM3, DNM1, EPN1, EPS15, NME1, NME2, PICALM, PPP3CA, PPP3CB, PPP3CC, SYNJ1, SYNJ2, SYT1 19 AMPH(11), AP2A1(2), AP2M1(1), CALM2(1), DNM1(2), EPN1(3), EPS15(5), PICALM(4), PPP3CA(4), PPP3CB(4), PPP3CC(2), SYNJ1(4), SYNJ2(3), SYT1(4) 5790874 50 44 49 10 17 14 4 6 9 0 0.19 1.00 1.00 219 HSA00720_REDUCTIVE_CARBOXYLATE_CYCLE Genes involved in reductive carboxylate cycle (CO2 fixation) ACLY, ACO1, ACO2, ACSS1, ACSS2, FH, IDH1, IDH2, LOC441996, MDH1, MDH2, SUCLA2 11 ACO1(2), ACO2(3), ACSS1(3), FH(2), IDH1(2), MDH1(1), MDH2(1), SUCLA2(2) 3541310 16 16 16 7 5 7 1 2 1 0 0.80 1.00 1.00 220 ARFPATHWAY Cyclin-dependent kinase inhibitor 2A is a tumor suppressor that induces G1 arrest and can activate the p53 pathway, leading to G2/M arrest. ABL1, CDKN2A, E2F1, MDM2, MYC, PIK3CA, PIK3R1, POLR1A, POLR1B, POLR1C, POLR1D, RAC1, RB1, TBX2, TP53, TWIST1 12 ABL1(3), E2F1(2), MDM2(2), MYC(1), PIK3R1(2), POLR1A(3), POLR1B(2), POLR1D(1), RAC1(1), TBX2(3) 3999838 20 16 20 9 8 6 0 4 2 0 0.82 1.00 1.00 221 41BBPATHWAY TNF-type receptor 4-1BB is bound by TRAF1 to activate the MAP kinase pathway in activated T cells. ATF2, CHUK, IFNG, IKBKB, IL2, IL4, JUN, MAP3K1, MAP3K5, MAP4K5, MAPK14, MAPK8, NFKB1, NFKBIA, RELA, TNFRSF9, TNFSF9, TRAF2 18 ATF2(3), CHUK(2), IFNG(1), IKBKB(2), IL4(2), JUN(3), MAP3K1(3), MAP3K5(4), MAP4K5(1), MAPK14(1), MAPK8(2), NFKB1(2), RELA(3), TNFRSF9(1) 5181046 30 25 29 9 10 7 2 7 4 0 0.62 1.00 1.00 222 CHOLESTEROL_BIOSYNTHESIS C10orf110, CYP51A1, DHCR7, FDFT1, FDPS, FDPS, LOC402397, HMGCR, HMGCS1, IDI1, LSS, MVD, MVK, NSDHL, PMVK, SC4MOL, SC5DL, SQLE 15 DHCR7(3), FDFT1(1), FDPS(1), HMGCR(1), HMGCS1(1), IDI1(1), LSS(2), MVD(1), NSDHL(1), SC5DL(1), SQLE(3) 3548964 16 15 16 5 4 6 0 6 0 0 0.62 1.00 1.00 223 HSA00150_ANDROGEN_AND_ESTROGEN_METABOLISM Genes involved in androgen and estrogen metabolism AKR1C4, AKR1D1, ARSD, ARSE, CARM1, CYP11B1, CYP11B2, CYP19A1, HEMK1, HSD11B1, HSD11B2, HSD17B1, HSD17B12, HSD17B2, HSD17B3, HSD17B7, HSD17B8, HSD3B1, HSD3B2, LCMT1, LCMT2, METTL2B, METTL6, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, SRD5A1, SRD5A2, STS, SULT1E1, SULT2A1, SULT2B1, UGT1A1, UGT1A10, UGT1A3, UGT1A4, UGT1A5, UGT1A6, UGT1A7, UGT1A8, UGT1A9, UGT2A1, UGT2A3, UGT2B10, UGT2B11, UGT2B15, UGT2B17, UGT2B28, UGT2B4, UGT2B7, WBSCR22 53 AKR1C4(1), AKR1D1(4), ARSD(1), ARSE(2), CARM1(1), CYP11B2(7), CYP19A1(4), HSD11B1(3), HSD11B2(1), HSD17B1(1), HSD17B12(2), HSD17B7(1), HSD3B1(5), HSD3B2(3), LCMT1(2), LCMT2(2), METTL2B(1), METTL6(2), PRMT2(2), PRMT3(3), PRMT5(2), PRMT6(2), PRMT7(6), PRMT8(3), SRD5A1(2), SRD5A2(2), STS(6), SULT1E1(1), SULT2A1(3), UGT1A1(1), UGT1A10(2), UGT1A3(1), UGT1A4(1), UGT1A5(3), UGT1A6(1), UGT1A7(2), UGT1A8(4), UGT1A9(3), UGT2A1(3), UGT2A3(6), UGT2B10(3), UGT2B11(5), UGT2B15(3), UGT2B28(5), UGT2B4(8), UGT2B7(2), WBSCR22(3) 13259220 131 80 131 23 29 45 10 31 16 0 0.0041 1.00 1.00 224 HSA03050_PROTEASOME Genes involved in proteasome PSMA1, PSMA2, PSMA3, PSMA4, PSMA5, PSMA6, PSMA7, PSMB1, PSMB2, PSMB3, PSMB4, PSMB5, PSMB6, PSMB7, PSMC2, PSMC3, PSMD1, PSMD11, PSMD12, PSMD13, PSMD2, PSMD6 22 PSMA4(1), PSMA5(1), PSMB3(1), PSMB4(2), PSMC2(4), PSMC3(2), PSMD1(4), PSMD11(1), PSMD12(1), PSMD13(1), PSMD2(1) 4260252 19 16 19 8 4 10 1 3 1 0 0.84 1.00 1.00 225 HSA00100_BIOSYNTHESIS_OF_STEROIDS Genes involved in biosynthesis of steroids CYP27B1, CYP51A1, DHCR24, DHCR7, EBP, FDFT1, FDPS, GGCX, GGPS1, HMGCR, HSD17B7, IDI1, IDI2, LSS, MVD, MVK, NQO1, NSDHL, PMVK, SC4MOL, SC5DL, SQLE, TM7SF2, VKORC1 24 DHCR7(3), FDFT1(1), FDPS(1), GGPS1(2), HMGCR(1), HSD17B7(1), IDI1(1), IDI2(2), LSS(2), MVD(1), NSDHL(1), SC5DL(1), SQLE(3), TM7SF2(1) 5196354 21 19 21 6 5 8 1 7 0 0 0.48 1.00 1.00 226 ARAPPATHWAY ADP-ribosylation factors (ARFs), members of the Ras superfamily, regulate eukaryotic vesicular trafficking and activate phospholipase D's. ARF1, ARFGAP1, ARFGAP3, ARFGEF2, BIG1, CENTD1, CENTD2, CLTA, CLTB, COP, COPA, DDEF1, DDEF2, GBF1, GPLD1, KDELR1, KDELR2, KDELR3, PSCD1, PSCD2, PSCD3, PSCD4 12 ARF1(1), ARFGAP1(1), ARFGEF2(3), CLTA(1), COPA(8), GBF1(6), GPLD1(1), KDELR2(1) 4298344 22 20 22 9 9 6 0 6 1 0 0.80 1.00 1.00 227 SPRYPATHWAY Four members of the Sprouty protein family block proliferative EGF signals by binding Grb-2, preventing Ras and MAP kinase activation. CBL, EGF, EGFR, GRB2, HRAS, MAP2K1, MAPK1, MAPK3, PTPRB, RAF1, RASA1, SHC1, SOS1, SPRY1, SPRY2, SPRY3, SPRY4, SRC 18 CBL(3), EGF(6), EGFR(7), HRAS(4), MAP2K1(2), MAPK1(1), MAPK3(1), PTPRB(17), RAF1(1), RASA1(8), SHC1(2), SOS1(11), SPRY2(1), SPRY3(4) 6691020 68 55 67 15 16 22 4 13 13 0 0.19 1.00 1.00 228 RELAPATHWAY Acetylated NF-kB proteins are immune to IkB regulation and promote transcription until the histone deacetylase HDAC3 deacetylates the RelA subunit of NF-kB. CHUK, CREBBP, EP300, FADD, HDAC3, IKBKB, IKBKG, NFKB1, NFKBIA, RELA, RIPK1, TNF, TNFRSF1A, TNFRSF1B, TRADD, TRAF6 15 CHUK(2), CREBBP(17), EP300(9), FADD(1), HDAC3(1), IKBKB(2), NFKB1(2), RELA(3), TNF(1), TNFRSF1A(2), TNFRSF1B(1), TRADD(1), TRAF6(5) 5997354 47 38 46 10 11 14 4 10 8 0 0.19 1.00 1.00 229 HSA04510_FOCAL_ADHESION Genes involved in focal adhesion ACTB, ACTG1, ACTN1, ACTN2, ACTN3, ACTN4, AKT1, AKT2, AKT3, ARHGAP5, BAD, BCAR1, BCL2, BIRC2, BIRC3, BIRC4, BRAF, CAPN2, CAV1, CAV2, CAV3, CCND1, CCND2, CCND3, CDC42, CHAD, COL11A1, COL11A2, COL1A1, COL1A2, COL2A1, COL3A1, COL4A1, COL4A2, COL4A4, COL4A6, COL5A1, COL5A2, COL5A3, COL6A1, COL6A2, COL6A3, COL6A6, COMP, CRK, CRKL, CTNNB1, DIAPH1, DOCK1, EGF, EGFR, ELK1, ERBB2, FARP2, FIGF, FLNA, FLNB, FLNC, FLT1, FN1, FYN, GRB2, GRLF1, GSK3B, HGF, HRAS, IBSP, IGF1, IGF1R, ILK, ITGA1, ITGA10, ITGA11, ITGA2, ITGA2B, ITGA3, ITGA4, ITGA5, ITGA6, ITGA7, ITGA8, ITGA9, ITGAV, ITGB1, ITGB3, ITGB4, ITGB5, ITGB6, ITGB7, ITGB8, JUN, KDR, LAMA1, LAMA2, LAMA3, LAMA4, LAMA5, LAMB1, LAMB2, LAMB3, LAMB4, LAMC1, LAMC2, LAMC3, LOC653852, MAP2K1, MAPK1, MAPK10, MAPK3, MAPK8, MAPK9, MET, MLCK, MRCL3, MRLC2, MYL2, MYL5, MYL7, MYL8P, MYL9, MYLC2PL, MYLK, MYLK2, MYLPF, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PARVA, PARVB, PARVG, PDGFA, PDGFB, PDGFC, PDGFD, PDGFRA, PDGFRB, PDPK1, PGF, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PIP5K1C, PPP1CA, PPP1CB, PPP1CC, PPP1R12A, PRKCA, PRKCB1, PRKCG, PTEN, PTK2, PXN, RAC1, RAC2, RAC3, RAF1, RAP1A, RAP1B, RAPGEF1, RELN, RHOA, ROCK1, ROCK2, SHC1, SHC2, SHC3, SHC4, SOS1, SOS2, SPP1, SRC, THBS1, THBS2, THBS3, THBS4, TLN1, TLN2, TNC, TNN, TNR, TNXB, VASP, VAV1, VAV2, VAV3, VCL, VEGFA, VEGFB, VEGFC, VTN, VWF, ZYX 189 ACTB(1), ACTG1(2), ACTN1(2), ACTN2(9), ACTN3(2), ACTN4(5), AKT1(1), AKT3(3), ARHGAP5(2), BCAR1(6), BIRC2(1), BIRC3(3), BRAF(8), CAPN2(2), CAV2(1), CAV3(1), CCND1(1), CCND2(3), CCND3(1), CDC42(1), COL11A1(45), COL11A2(13), COL1A1(11), COL1A2(14), COL2A1(12), COL3A1(16), COL4A1(9), COL4A2(10), COL4A4(11), COL4A6(8), COL5A1(7), COL5A2(14), COL5A3(12), COL6A2(6), COL6A3(13), COMP(1), CRKL(1), CTNNB1(4), DIAPH1(1), DOCK1(4), EGF(6), EGFR(7), ERBB2(2), FARP2(7), FIGF(2), FLNA(14), FLNB(3), FLNC(16), FLT1(11), FN1(21), FYN(5), GRLF1(13), HGF(10), HRAS(4), IBSP(6), IGF1(3), IGF1R(1), ILK(1), ITGA1(4), ITGA10(8), ITGA11(6), ITGA2(5), ITGA2B(2), ITGA3(1), ITGA4(4), ITGA5(2), ITGA6(7), ITGA7(4), ITGA8(13), ITGA9(2), ITGAV(4), ITGB1(5), ITGB3(4), ITGB4(8), ITGB6(1), ITGB7(1), ITGB8(4), JUN(3), KDR(15), LAMA1(15), LAMA2(24), LAMA3(10), LAMA4(16), LAMA5(7), LAMB1(6), LAMB2(4), LAMB3(3), LAMB4(6), LAMC1(8), LAMC2(5), LAMC3(5), MAP2K1(2), MAPK1(1), MAPK10(1), MAPK3(1), MAPK8(2), MAPK9(1), MET(4), MYL2(2), MYL9(1), MYLK(8), MYLK2(3), MYLPF(1), PAK1(2), PAK2(1), PAK3(1), PAK4(1), PAK7(6), PARVB(1), PARVG(2), PDGFB(1), PDGFC(2), PDGFD(1), PDGFRA(10), PDGFRB(6), PDPK1(1), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PIP5K1C(2), PRKCA(5), PRKCG(9), PTK2(6), PXN(3), RAC1(1), RAF1(1), RAP1A(1), RAP1B(1), RAPGEF1(4), RELN(33), ROCK1(5), ROCK2(3), SHC1(2), SHC2(4), SHC3(2), SHC4(5), SOS1(11), SOS2(7), SPP1(1), THBS1(1), THBS2(16), THBS3(3), THBS4(1), TLN1(6), TLN2(14), TNC(14), TNN(20), TNR(26), TNXB(19), VASP(2), VAV1(7), VAV2(4), VAV3(1), VCL(2), VEGFC(6), VWF(17), ZYX(1) 97749056 974 172 971 289 270 374 66 150 114 0 0.22 1.00 1.00 230 HSA04080_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION Genes involved in neuroactive ligand-receptor interaction ADCYAP1R1, ADORA1, ADORA2A, ADORA2B, ADORA3, ADRA1A, ADRA1B, ADRA2A, ADRA2B, ADRA2C, ADRB1, ADRB2, ADRB3, AGTR1, AGTR2, AGTRL1, AVPR1A, AVPR1B, AVPR2, BDKRB1, BDKRB2, BRS3, C3AR1, C5AR1, CALCR, CALCRL, CCKAR, CCKBR, CGA, CHRM1, CHRM2, CHRM3, CHRM4, CHRM5, CNR1, CNR2, CRHR1, CRHR2, CTSG, CYSLTR1, CYSLTR2, DRD1, DRD2, DRD3, DRD4, DRD5, EDG1, EDG2, EDG3, EDG4, EDG5, EDG6, EDG7, EDG8, EDNRA, EDNRB, F2, F2R, F2RL1, F2RL2, F2RL3, FPR1, FPRL1, FPRL2, FSHB, FSHR, GABBR1, GABBR2, GABRA1, GABRA2, GABRA3, GABRA4, GABRA5, GABRA6, GABRB1, GABRB2, GABRB3, GABRD, GABRE, GABRG1, GABRG2, GABRG3, GABRP, GABRQ, GABRR1, GABRR2, GALR1, GALR2, GALR3, GCGR, GH1, GH2, GHR, GHRHR, GHSR, GIPR, GLP1R, GLP2R, GLRA1, GLRA2, GLRA3, GLRB, GNRHR, GPR156, GPR23, GPR35, GPR50, GPR63, GPR83, GRIA1, GRIA2, GRIA3, GRIA4, GRID1, GRID2, GRIK1, GRIK2, GRIK3, GRIK4, GRIK5, GRIN1, GRIN2A, GRIN2B, GRIN2C, GRIN2D, GRIN3A, GRIN3B, GRM1, GRM2, GRM3, GRM4, GRM5, GRM6, GRM7, GRM8, GRPR, GZMA, HCRTR1, HCRTR2, HRH1, HRH2, HRH3, HRH4, HTR1A, HTR1B, HTR1D, HTR1E, HTR1F, HTR2A, HTR2B, HTR2C, HTR4, HTR5A, HTR6, HTR7, KISS1R, LEP, LEPR, LHB, LHCGR, LTB4R, LTB4R2, MAS1, MC1R, MC2R, MC3R, MC4R, MC5R, MCHR1, MCHR2, MLNR, MTNR1A, MTNR1B, NMBR, NMUR1, NMUR2, NPBWR1, NPBWR2, NPFFR1, NPFFR2, NPY1R, NPY2R, NPY5R, NR3C1, NTSR1, NTSR2, OPRD1, OPRK1, OPRL1, OPRM1, OXTR, P2RX1, P2RX2, P2RX3, P2RX4, P2RX5, P2RX7, P2RXL1, P2RY1, P2RY10, P2RY11, P2RY13, P2RY14, P2RY2, P2RY4, P2RY5, P2RY6, P2RY8, PARD3, PPYR1, PRL, PRLHR, PRLR, PRSS1, PRSS2, PRSS3, PTAFR, PTGDR, PTGER1, PTGER2, PTGER3, PTGER4, PTGFR, PTGIR, PTH2R, PTHR1, RXFP1, RXFP2, SCTR, SSTR1, SSTR2, SSTR3, SSTR4, SSTR5, TAAR1, TAAR2, TAAR5, TAAR6, TAAR8, TAAR9, TACR1, TACR2, TACR3, TBXA2R, THRA, THRB, TRHR, TRPV1, TSHB, TSHR, TSPO, UTS2R, VIPR1, VIPR2 233 ADCYAP1R1(9), ADORA1(3), ADORA2A(5), ADORA3(1), ADRA1A(2), ADRA1B(3), ADRA2B(6), ADRA2C(2), ADRB1(1), ADRB2(4), AGTR1(5), AGTR2(3), AVPR1A(3), AVPR1B(2), AVPR2(4), BDKRB1(2), BDKRB2(3), C3AR1(2), C5AR1(3), CALCR(10), CALCRL(3), CCKAR(2), CCKBR(2), CGA(2), CHRM2(8), CHRM3(5), CHRM4(1), CHRM5(3), CNR1(5), CNR2(2), CRHR1(3), CRHR2(3), CTSG(3), CYSLTR1(2), CYSLTR2(1), DRD1(1), DRD2(4), DRD3(5), DRD4(1), DRD5(5), EDNRA(1), EDNRB(5), F2R(2), F2RL1(3), F2RL2(1), F2RL3(1), FPR1(1), FSHB(2), FSHR(15), GABBR1(3), GABBR2(3), GABRA1(7), GABRA3(4), GABRA4(4), GABRA5(6), GABRA6(8), GABRB1(4), GABRB2(6), GABRB3(11), GABRD(2), GABRE(4), GABRG1(15), GABRG2(4), GABRP(2), GABRQ(5), GABRR1(4), GABRR2(4), GALR1(5), GH1(2), GH2(5), GHR(3), GHRHR(4), GHSR(4), GLP1R(1), GLP2R(5), GLRA1(2), GLRA2(5), GLRA3(3), GLRB(3), GPR156(4), GPR35(1), GPR50(5), GPR63(4), GPR83(2), GRIA1(9), GRIA2(7), GRIA3(11), GRIA4(10), GRID1(13), GRID2(15), GRIK1(5), GRIK2(9), GRIK3(10), GRIK4(4), GRIK5(2), GRIN1(1), GRIN2A(16), GRIN2B(18), GRIN2C(3), GRIN2D(3), GRIN3A(8), GRIN3B(4), GRM1(12), GRM2(2), GRM3(14), GRM4(3), GRM5(12), GRM6(6), GRM7(10), GRM8(13), GRPR(3), GZMA(4), HCRTR2(3), HRH1(3), HRH2(1), HRH3(1), HRH4(4), HTR1A(7), HTR1B(3), HTR1E(5), HTR1F(2), HTR2A(3), HTR2B(1), HTR2C(4), HTR4(3), HTR5A(4), HTR6(1), HTR7(3), LEPR(15), LHB(1), LHCGR(9), LTB4R2(1), MAS1(3), MC2R(2), MC3R(2), MC4R(2), MC5R(3), MCHR1(2), MCHR2(6), MLNR(2), MTNR1A(1), NMBR(3), NMUR2(1), NPBWR1(4), NPBWR2(3), NPFFR2(8), NPY1R(3), NPY2R(4), NPY5R(4), NR3C1(1), NTSR1(4), NTSR2(3), OPRD1(2), OPRK1(1), OPRL1(2), OPRM1(6), OXTR(1), P2RX2(4), P2RX3(5), P2RX4(1), P2RX7(2), P2RY1(3), P2RY10(5), P2RY13(1), P2RY14(3), P2RY2(3), P2RY4(2), P2RY6(2), P2RY8(2), PARD3(8), PPYR1(4), PRL(1), PRLHR(2), PRLR(6), PRSS1(4), PRSS3(2), PTAFR(3), PTGDR(5), PTGER2(2), PTGER3(5), PTGER4(2), PTGFR(5), PTGIR(1), PTH2R(5), RXFP1(8), RXFP2(2), SCTR(1), SSTR1(3), SSTR2(2), SSTR3(2), SSTR4(2), SSTR5(1), TAAR1(5), TAAR2(4), TAAR5(5), TAAR6(5), TAAR8(3), TAAR9(3), TACR1(3), TACR2(1), TACR3(4), TBXA2R(2), THRA(1), THRB(2), TRHR(2), TRPV1(3), TSHR(5), VIPR2(3) 58557194 853 170 850 296 194 343 74 149 93 0 0.12 1.00 1.00 231 HSA04020_CALCIUM_SIGNALING_PATHWAY Genes involved in calcium signaling pathway ADCY1, ADCY2, ADCY3, ADCY4, ADCY7, ADCY8, ADCY9, ADORA2A, ADORA2B, ADRA1A, ADRA1B, ADRA1D, ADRB1, ADRB2, ADRB3, AGTR1, ATP2A1, ATP2A2, ATP2A3, ATP2B1, ATP2B2, ATP2B3, ATP2B4, AVPR1A, AVPR1B, BDKRB1, BDKRB2, BST1, CACNA1A, CACNA1B, CACNA1C, CACNA1D, CACNA1E, CACNA1F, CACNA1G, CACNA1H, CACNA1I, CACNA1S, CALM1, CALM2, CALM3, CALML3, CALML6, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CAMK4, CCKAR, CCKBR, CD38, CHP, CHRM1, CHRM2, CHRM3, CHRM5, CHRNA7, CYSLTR1, CYSLTR2, DRD1, EDNRA, EDNRB, EGFR, ERBB2, ERBB3, ERBB4, F2R, GNA11, GNA14, GNA15, GNAL, GNAQ, GNAS, GRIN1, GRIN2A, GRIN2C, GRIN2D, GRM1, GRM5, GRPR, HRH1, HRH2, HTR2A, HTR2B, HTR2C, HTR4, HTR5A, HTR6, HTR7, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, LHCGR, LTB4R2, MLCK, MYLK, MYLK2, NOS1, NOS2A, NOS3, NTSR1, OXTR, P2RX1, P2RX2, P2RX3, P2RX4, P2RX5, P2RX7, P2RXL1, PDE1A, PDE1B, PDE1C, PDGFRA, PDGFRB, PHKA1, PHKA2, PHKB, PHKG1, PHKG2, PLCB1, PLCB2, PLCB3, PLCB4, PLCD1, PLCD3, PLCD4, PLCE1, PLCG1, PLCG2, PLCZ1, PLN, PPID, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKX, PRKY, PTAFR, PTGER1, PTGER3, PTGFR, PTK2B, RYR1, RYR2, RYR3, SLC25A4, SLC25A5, SLC25A6, SLC8A1, SLC8A2, SLC8A3, SPHK1, SPHK2, TACR1, TACR2, TACR3, TBXA2R, TNNC1, TNNC2, TRHR, TRPC1, VDAC1, VDAC2, VDAC3 168 ADCY1(10), ADCY2(17), ADCY3(7), ADCY4(4), ADCY7(7), ADCY8(18), ADCY9(3), ADORA2A(5), ADRA1A(2), ADRA1B(3), ADRA1D(3), ADRB1(1), ADRB2(4), AGTR1(5), ATP2A1(1), ATP2A2(3), ATP2A3(3), ATP2B1(4), ATP2B2(7), ATP2B3(2), ATP2B4(3), AVPR1A(3), AVPR1B(2), BDKRB1(2), BDKRB2(3), BST1(1), CACNA1A(10), CACNA1B(10), CACNA1C(15), CACNA1D(6), CACNA1E(19), CACNA1F(10), CACNA1G(7), CACNA1H(5), CACNA1I(11), CACNA1S(6), CALM2(1), CALML6(1), CAMK2A(1), CAMK2B(2), CAMK2D(1), CAMK4(3), CCKAR(2), CCKBR(2), CD38(2), CHP(2), CHRM2(8), CHRM3(5), CHRM5(3), CHRNA7(1), CYSLTR1(2), CYSLTR2(1), DRD1(1), EDNRA(1), EDNRB(5), EGFR(7), ERBB2(2), ERBB3(4), ERBB4(13), F2R(2), GNA11(1), GNA14(3), GNA15(1), GNAL(1), GNAS(6), GRIN1(1), GRIN2A(16), GRIN2C(3), GRIN2D(3), GRM1(12), GRM5(12), GRPR(3), HRH1(3), HRH2(1), HTR2A(3), HTR2B(1), HTR2C(4), HTR4(3), HTR5A(4), HTR6(1), HTR7(3), ITPKA(1), ITPKB(6), ITPR1(6), ITPR2(13), ITPR3(4), LHCGR(9), LTB4R2(1), MYLK(8), MYLK2(3), NOS1(11), NOS3(2), NTSR1(4), OXTR(1), P2RX2(4), P2RX3(5), P2RX4(1), P2RX7(2), PDE1A(2), PDE1B(3), PDE1C(12), PDGFRA(10), PDGFRB(6), PHKA1(6), PHKA2(4), PHKB(6), PHKG1(2), PHKG2(1), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), PLCD1(1), PLCD3(1), PLCE1(13), PLCG1(3), PLCG2(4), PLCZ1(5), PLN(1), PPP3CA(4), PPP3CB(4), PPP3CC(2), PPP3R1(1), PPP3R2(4), PRKACB(3), PRKACG(1), PRKCA(5), PRKCG(9), PRKX(1), PTAFR(3), PTGER3(5), PTGFR(5), RYR1(27), RYR2(112), RYR3(50), SLC25A5(1), SLC25A6(1), SLC8A1(15), SLC8A2(2), SLC8A3(3), SPHK2(1), TACR1(3), TACR2(1), TACR3(4), TBXA2R(2), TNNC1(1), TRHR(2), TRPC1(6), VDAC1(1) 72590536 843 169 838 257 195 350 56 149 91 2 0.011 1.00 1.00 232 HSA01430_CELL_COMMUNICATION Genes involved in cell communication ACTB, ACTG1, CHAD, COL11A1, COL11A2, COL17A1, COL1A1, COL1A2, COL2A1, COL3A1, COL4A1, COL4A2, COL4A4, COL4A6, COL5A1, COL5A2, COL5A3, COL6A1, COL6A2, COL6A3, COL6A6, COMP, DES, DSC1, DSC2, DSC3, DSG1, DSG2, DSG3, DSG4, FN1, GJA1, GJA10, GJA3, GJA4, GJA5, GJA8, GJA9, GJB1, GJB2, GJB3, GJB4, GJB5, GJB6, GJB7, GJC1, GJC2, GJC3, GJD2, GJD3, GJD4, IBSP, INA, ITGA6, ITGB4, KRT1, KRT10, KRT12, KRT13, KRT14, KRT15, KRT16, KRT17, KRT18, KRT19, KRT2, KRT20, KRT23, KRT24, KRT25, KRT27, KRT28, KRT3, KRT31, KRT32, KRT33A, KRT33B, KRT34, KRT35, KRT36, KRT37, KRT38, KRT39, KRT4, KRT40, KRT5, KRT6A, KRT6B, KRT6C, KRT7, KRT71, KRT72, KRT73, KRT74, KRT75, KRT76, KRT77, KRT78, KRT79, KRT8, KRT81, KRT82, KRT83, KRT84, KRT85, KRT86, KRT9, LAMA1, LAMA2, LAMA3, LAMA4, LAMA5, LAMB1, LAMB2, LAMB3, LAMB4, LAMC1, LAMC2, LAMC3, LMNA, LMNB1, LMNB2, LOC728760, NES, PRPH, RELN, SPP1, THBS1, THBS2, THBS3, THBS4, TNC, TNN, TNR, TNXB, VIM, VTN, VWF 135 ACTB(1), ACTG1(2), COL11A1(45), COL11A2(13), COL17A1(4), COL1A1(11), COL1A2(14), COL2A1(12), COL3A1(16), COL4A1(9), COL4A2(10), COL4A4(11), COL4A6(8), COL5A1(7), COL5A2(14), COL5A3(12), COL6A2(6), COL6A3(13), COMP(1), DES(3), DSC1(8), DSC2(1), DSC3(6), DSG1(9), DSG2(3), DSG3(4), DSG4(8), FN1(21), GJA1(4), GJA10(7), GJA4(1), GJA5(1), GJA8(4), GJA9(4), GJB2(1), GJB4(3), GJC1(2), GJC2(1), GJC3(1), GJD2(2), GJD4(2), IBSP(6), INA(2), ITGA6(7), ITGB4(8), KRT1(1), KRT10(1), KRT12(3), KRT13(4), KRT14(3), KRT15(1), KRT16(3), KRT17(2), KRT18(2), KRT2(5), KRT20(2), KRT23(4), KRT24(3), KRT27(2), KRT28(2), KRT3(2), KRT31(2), KRT32(2), KRT33A(1), KRT35(1), KRT36(2), KRT37(2), KRT39(1), KRT4(2), KRT40(2), KRT5(1), KRT6A(2), KRT6B(3), KRT6C(1), KRT71(3), KRT72(4), KRT73(6), KRT74(2), KRT75(1), KRT76(3), KRT77(4), KRT79(3), KRT8(1), KRT81(3), KRT82(2), KRT83(2), KRT84(4), KRT85(2), KRT86(1), KRT9(2), LAMA1(15), LAMA2(24), LAMA3(10), LAMA4(16), LAMA5(7), LAMB1(6), LAMB2(4), LAMB3(3), LAMB4(6), LAMC1(8), LAMC2(5), LAMC3(5), LMNA(1), NES(13), PRPH(3), RELN(33), SPP1(1), THBS1(1), THBS2(16), THBS3(3), THBS4(1), TNC(14), TNN(20), TNR(26), TNXB(19), VIM(6), VWF(17) 65529632 716 166 715 213 197 280 56 104 79 0 0.19 1.00 1.00 233 HSA04010_MAPK_SIGNALING_PATHWAY Genes involved in MAPK signaling pathway ACVR1B, ACVR1C, AKT1, AKT2, AKT3, ARRB1, ARRB2, ATF2, ATF4, BDNF, BRAF, CACNA1A, CACNA1B, CACNA1C, CACNA1D, CACNA1E, CACNA1F, CACNA1G, CACNA1H, CACNA1I, CACNA1S, CACNA2D1, CACNA2D2, CACNA2D3, CACNA2D4, CACNB1, CACNB2, CACNB3, CACNB4, CACNG1, CACNG2, CACNG3, CACNG4, CACNG5, CACNG6, CACNG7, CACNG8, CASP3, CD14, CDC25B, CDC42, CHP, CHUK, CRK, CRKL, DAXX, DDIT3, DUSP1, DUSP10, DUSP14, DUSP16, DUSP2, DUSP3, DUSP4, DUSP5, DUSP6, DUSP7, DUSP8, DUSP9, ECSIT, EGF, EGFR, ELK1, ELK4, EVI1, FAS, FASLG, FGF1, FGF10, FGF11, FGF12, FGF13, FGF14, FGF16, FGF17, FGF18, FGF19, FGF2, FGF20, FGF21, FGF22, FGF23, FGF3, FGF4, FGF5, FGF6, FGF7, FGF8, FGF9, FGFR1, FGFR2, FGFR3, FGFR4, FLNA, FLNB, FLNC, FOS, GADD45A, GADD45B, GADD45G, GNA12, GNG12, GRB2, HRAS, IKBKB, IKBKG, IL1A, IL1B, IL1R1, IL1R2, JUN, JUND, KRAS, LOC653852, MAP2K1, MAP2K1IP1, MAP2K2, MAP2K3, MAP2K4, MAP2K5, MAP2K6, MAP2K7, MAP3K1, MAP3K10, MAP3K12, MAP3K13, MAP3K14, MAP3K2, MAP3K3, MAP3K4, MAP3K5, MAP3K6, MAP3K7, MAP3K7IP1, MAP3K7IP2, MAP3K8, MAP4K1, MAP4K2, MAP4K3, MAP4K4, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK7, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, MAPKAPK2, MAPKAPK3, MAPKAPK5, MAPT, MAX, MEF2C, MKNK1, MKNK2, MOS, MRAS, MYC, NF1, NFATC2, NFATC4, NFKB1, NFKB2, NGFB, NLK, NR4A1, NRAS, NTF3, NTF5, NTRK1, NTRK2, PAK1, PAK2, PDGFA, PDGFB, PDGFRA, PDGFRB, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PPM1A, PPM1B, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PPP5C, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKX, PRKY, PTPN5, PTPN7, PTPRR, RAC1, RAC2, RAC3, RAF1, RAP1A, RAP1B, RAPGEF2, RASA1, RASA2, RASGRF1, RASGRF2, RASGRP1, RASGRP2, RASGRP3, RASGRP4, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA4, RPS6KA5, RPS6KA6, RRAS, RRAS2, SOS1, SOS2, SRF, STK3, STK4, STMN1, TAOK1, TAOK2, TAOK3, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, TNF, TNFRSF1A, TP53, TRAF2, TRAF6, ZAK 246 ACVR1B(3), ACVR1C(4), AKT1(1), AKT3(3), ARRB1(2), ATF2(3), ATF4(2), BDNF(1), BRAF(8), CACNA1A(10), CACNA1B(10), CACNA1C(15), CACNA1D(6), CACNA1E(19), CACNA1F(10), CACNA1G(7), CACNA1H(5), CACNA1I(11), CACNA1S(6), CACNA2D1(10), CACNA2D2(3), CACNA2D3(3), CACNA2D4(9), CACNB2(5), CACNB3(2), CACNB4(1), CACNG2(1), CACNG3(4), CACNG4(2), CACNG6(1), CACNG7(4), CACNG8(1), CD14(2), CDC25B(2), CDC42(1), CHP(2), CHUK(2), CRKL(1), DAXX(3), DUSP10(4), DUSP16(2), DUSP4(2), DUSP5(5), DUSP6(2), DUSP7(1), DUSP8(1), DUSP9(2), EGF(6), EGFR(7), ELK4(1), FAS(1), FASLG(1), FGF10(2), FGF12(3), FGF14(2), FGF18(1), FGF2(2), FGF22(1), FGF23(2), FGF3(1), FGF5(2), FGF6(2), FGF8(1), FGFR1(1), FGFR2(4), FGFR3(4), FGFR4(2), FLNA(14), FLNB(3), FLNC(16), FOS(2), GADD45A(1), GADD45B(1), GADD45G(1), GNA12(2), GNG12(1), HRAS(4), IKBKB(2), IL1A(1), IL1B(1), IL1R1(1), IL1R2(3), JUN(3), JUND(2), KRAS(2), MAP2K1(2), MAP2K2(1), MAP2K3(3), MAP2K4(1), MAP2K5(1), MAP2K6(2), MAP2K7(1), MAP3K1(3), MAP3K12(4), MAP3K13(5), MAP3K14(1), MAP3K3(1), MAP3K4(4), MAP3K5(4), MAP3K6(1), MAP3K7(2), MAP4K1(3), MAP4K2(1), MAP4K3(7), MAP4K4(7), MAPK1(1), MAPK10(1), MAPK11(2), MAPK13(2), MAPK14(1), MAPK3(1), MAPK7(1), MAPK8(2), MAPK8IP1(2), MAPK8IP3(3), MAPK9(1), MAPKAPK2(2), MAPKAPK3(1), MAPKAPK5(3), MAPT(4), MEF2C(4), MKNK2(1), MOS(4), MRAS(2), MYC(1), NF1(22), NFATC2(4), NFATC4(2), NFKB1(2), NFKB2(2), NLK(2), NR4A1(4), NRAS(1), NTF3(3), NTRK1(4), NTRK2(1), PAK1(2), PAK2(1), PDGFB(1), PDGFRA(10), PDGFRB(6), PLA2G2A(1), PLA2G2E(2), PLA2G2F(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5), PPM1A(2), PPM1B(3), PPP3CA(4), PPP3CB(4), PPP3CC(2), PPP3R1(1), PPP3R2(4), PRKACB(3), PRKACG(1), PRKCA(5), PRKCG(9), PRKX(1), PTPN5(1), PTPN7(1), PTPRR(9), RAC1(1), RAF1(1), RAP1A(1), RAP1B(1), RAPGEF2(6), RASA1(8), RASA2(3), RASGRF1(7), RASGRF2(6), RASGRP1(1), RASGRP2(1), RASGRP3(7), RASGRP4(5), RPS6KA1(2), RPS6KA2(6), RPS6KA3(1), RPS6KA4(1), RPS6KA5(4), RPS6KA6(5), RRAS2(2), SOS1(11), SOS2(7), SRF(2), STK3(2), STK4(2), TAOK1(7), TAOK2(5), TAOK3(4), TGFB1(1), TGFB2(3), TGFBR2(3), TNF(1), TNFRSF1A(2), TRAF6(5) 76864850 666 165 659 213 188 240 40 108 90 0 0.31 1.00 1.00 234 HSA04530_TIGHT_JUNCTION Genes involved in tight junction ACTB, ACTG1, ACTN1, ACTN2, ACTN3, ACTN4, AKT1, AKT2, AKT3, AMOTL1, ASH1L, CASK, CDC42, CDK4, CGN, CLDN1, CLDN10, CLDN11, CLDN14, CLDN15, CLDN16, CLDN17, CLDN18, CLDN19, CLDN2, CLDN20, CLDN22, CLDN23, CLDN3, CLDN4, CLDN5, CLDN6, CLDN7, CLDN8, CLDN9, CRB3, CSDA, CSNK2A1, CSNK2A2, CSNK2B, CTNNA1, CTNNA2, CTNNA3, CTNNB1, CTTN, EPB41, EPB41L1, EPB41L2, EPB41L3, EXOC3, EXOC4, F11R, GNAI1, GNAI2, GNAI3, HCLS1, HRAS, IGSF5, INADL, JAM2, JAM3, KRAS, LLGL1, LLGL2, MAGI1, MAGI2, MAGI3, MLLT4, MPDZ, MPP5, MRAS, MRCL3, MRLC2, MYH1, MYH10, MYH11, MYH13, MYH14, MYH15, MYH2, MYH3, MYH4, MYH6, MYH7, MYH7B, MYH8, MYH9, MYL2, MYL5, MYL7, MYL8P, MYL9, MYLC2PL, MYLPF, NRAS, OCLN, PARD3, PARD6A, PARD6B, PARD6G, PPM1J, PPP2CA, PPP2CB, PPP2R1A, PPP2R1B, PPP2R2A, PPP2R2B, PPP2R2C, PPP2R3A, PPP2R3B, PPP2R4, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCI, PRKCQ, PRKCZ, PTEN, RAB13, RAB3B, RHOA, RRAS, RRAS2, SPTAN1, SRC, SYMPK, TJAP1, TJP1, TJP2, TJP3, VAPA, YES1, ZAK 129 ACTB(1), ACTG1(2), ACTN1(2), ACTN2(9), ACTN3(2), ACTN4(5), AKT1(1), AKT3(3), AMOTL1(3), ASH1L(9), CASK(2), CDC42(1), CGN(5), CLDN1(2), CLDN10(4), CLDN11(1), CLDN15(1), CLDN16(4), CLDN17(1), CLDN18(1), CLDN19(1), CLDN2(1), CLDN22(1), CLDN3(1), CLDN4(1), CLDN5(1), CLDN6(2), CLDN8(1), CLDN9(3), CSDA(5), CSNK2A1(3), CTNNA1(1), CTNNA2(27), CTNNA3(16), CTNNB1(4), CTTN(5), EPB41(3), EPB41L1(2), EPB41L2(3), EPB41L3(20), EXOC3(3), EXOC4(3), F11R(1), GNAI1(3), GNAI3(1), HCLS1(3), HRAS(4), IGSF5(2), INADL(13), JAM2(2), KRAS(2), LLGL1(1), LLGL2(3), MAGI1(7), MAGI2(12), MAGI3(2), MLLT4(4), MPDZ(6), MPP5(4), MRAS(2), MYH1(23), MYH10(1), MYH11(8), MYH13(11), MYH14(6), MYH15(17), MYH2(31), MYH3(6), MYH4(21), MYH6(14), MYH7(13), MYH7B(8), MYH8(24), MYH9(13), MYL2(2), MYL9(1), MYLPF(1), NRAS(1), PARD3(8), PARD6A(1), PARD6G(1), PPM1J(1), PPP2R1A(8), PPP2R1B(2), PPP2R2A(1), PPP2R2B(1), PPP2R2C(2), PPP2R3A(3), PPP2R4(1), PRKCA(5), PRKCD(2), PRKCE(3), PRKCG(9), PRKCI(5), PRKCQ(4), PRKCZ(1), RAB3B(2), RRAS2(2), SPTAN1(4), SYMPK(8), TJAP1(4), TJP1(9), TJP2(3), TJP3(2), VAPA(1), YES1(1) 51793016 533 165 532 146 157 184 40 86 66 0 0.088 1.00 1.00 235 CALCIUM_REGULATION_IN_CARDIAC_CELLS ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ADRA1A, ADRA1B, ADRA1D, ADRB1, ADRB2, ADRB3, ANXA6, ARRB1, ARRB2, ATP1A4, ATP1B1, ATP1B2, ATP1B3, ATP2A2, ATP2A3, ATP2B1, ATP2B2, ATP2B3, CACNA1A, CACNA1B, CACNA1C, CACNA1D, CACNA1E, CACNA1S, CACNB1, CACNB3, CALM1, CALM2, CALM3, CALR, CAMK1, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CAMK4, CASQ1, CASQ2, CHRM1, CHRM2, CHRM3, CHRM4, CHRM5, FXYD2, GJA1, GJA12, GJA4, GJA5, GJB1, GJB2, GJB3, GJB4, GJB5, GJB6, GNA11, GNAI2, GNAI3, GNAO1, GNAQ, GNAZ, GNB1, GNB2, GNB3, GNB4, GNB5, GNG12, GNG13, GNG2, GNG3, GNG4, GNG5, GNG7, GNGT1, GRK4, GRK5, GRK6, ITPR1, ITPR2, ITPR3, KCNB1, KCNJ3, KCNJ5, MGC11266, MYCBP, NME7, PEA15, PKIA, PKIB, PKIG, PLCB3, PLN, PRKACA, PRKACB, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCQ, PRKCZ, PRKD1, RGS1, RGS10, RGS11, RGS14, RGS16, RGS17, RGS18, RGS19, RGS2, RGS20, RGS3, RGS4, RGS5, RGS6, RGS7, RGS9, RYR1, RYR2, RYR3, SARA1, SFN, SLC8A1, SLC8A3, USP5, YWHAB, YWHAH, YWHAQ, YWHAQ, MIB1 138 ADCY1(10), ADCY2(17), ADCY3(7), ADCY4(4), ADCY5(1), ADCY6(2), ADCY7(7), ADCY8(18), ADCY9(3), ADRA1A(2), ADRA1B(3), ADRA1D(3), ADRB1(1), ADRB2(4), ANXA6(4), ARRB1(2), ATP1A4(6), ATP1B2(1), ATP1B3(1), ATP2A2(3), ATP2A3(3), ATP2B1(4), ATP2B2(7), ATP2B3(2), CACNA1A(10), CACNA1B(10), CACNA1C(15), CACNA1D(6), CACNA1E(19), CACNA1S(6), CACNB3(2), CALM2(1), CALR(1), CAMK2A(1), CAMK2B(2), CAMK2D(1), CAMK4(3), CASQ1(1), CASQ2(3), CHRM2(8), CHRM3(5), CHRM4(1), CHRM5(3), GJA1(4), GJA4(1), GJA5(1), GJB2(1), GJB4(3), GNA11(1), GNAI3(1), GNAZ(3), GNB1(1), GNB2(2), GNB3(2), GNB4(3), GNB5(1), GNG12(1), GNG4(2), GNG5(1), GRK4(1), GRK5(1), GRK6(1), ITPR1(6), ITPR2(13), ITPR3(4), KCNB1(1), KCNJ5(2), MIB1(2), NME7(3), PEA15(1), PKIB(1), PLCB3(4), PLN(1), PRKACB(3), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PRKCA(5), PRKCD(2), PRKCE(3), PRKCG(9), PRKCQ(4), PRKCZ(1), PRKD1(11), RGS1(3), RGS10(1), RGS11(1), RGS16(1), RGS17(2), RGS18(1), RGS19(1), RGS20(1), RGS3(5), RGS5(2), RGS6(5), RGS7(13), RGS9(2), RYR1(27), RYR2(112), RYR3(50), SFN(2), SLC8A1(15), SLC8A3(3), USP5(2), YWHAB(1), YWHAQ(1) 50515688 577 159 573 179 132 232 40 110 61 2 0.079 1.00 1.00 236 HSA04512_ECM_RECEPTOR_INTERACTION Genes involved in ECM-receptor interaction AGRN, CD36, CD44, CD47, CHAD, COL11A1, COL11A2, COL1A1, COL1A2, COL2A1, COL3A1, COL4A1, COL4A2, COL4A4, COL4A6, COL5A1, COL5A2, COL5A3, COL6A1, COL6A2, COL6A3, COL6A6, DAG1, FN1, FNDC1, FNDC3A, FNDC4, FNDC5, GP1BA, GP1BB, GP5, GP6, GP9, HMMR, HSPG2, IBSP, ITGA1, ITGA10, ITGA11, ITGA2, ITGA2B, ITGA3, ITGA4, ITGA5, ITGA6, ITGA7, ITGA8, ITGA9, ITGAV, ITGB1, ITGB3, ITGB4, ITGB5, ITGB6, ITGB7, ITGB8, LAMA1, LAMA2, LAMA3, LAMA4, LAMA5, LAMB1, LAMB2, LAMB3, LAMB4, LAMC1, LAMC2, LAMC3, RELN, SDC1, SDC2, SDC3, SDC4, SPP1, SV2A, SV2B, SV2C, THBS1, THBS2, THBS3, THBS4, TNC, TNN, TNR, TNXB, VTN, VWF 84 AGRN(3), CD36(1), CD44(5), CD47(2), COL11A1(45), COL11A2(13), COL1A1(11), COL1A2(14), COL2A1(12), COL3A1(16), COL4A1(9), COL4A2(10), COL4A4(11), COL4A6(8), COL5A1(7), COL5A2(14), COL5A3(12), COL6A2(6), COL6A3(13), DAG1(2), FN1(21), FNDC1(8), FNDC3A(1), GP5(4), GP6(2), GP9(2), HMMR(2), HSPG2(11), IBSP(6), ITGA1(4), ITGA10(8), ITGA11(6), ITGA2(5), ITGA2B(2), ITGA3(1), ITGA4(4), ITGA5(2), ITGA6(7), ITGA7(4), ITGA8(13), ITGA9(2), ITGAV(4), ITGB1(5), ITGB3(4), ITGB4(8), ITGB6(1), ITGB7(1), ITGB8(4), LAMA1(15), LAMA2(24), LAMA3(10), LAMA4(16), LAMA5(7), LAMB1(6), LAMB2(4), LAMB3(3), LAMB4(6), LAMC1(8), LAMC2(5), LAMC3(5), RELN(33), SDC1(1), SDC2(2), SDC3(2), SPP1(1), SV2A(3), SV2B(4), SV2C(4), THBS1(1), THBS2(16), THBS3(3), THBS4(1), TNC(14), TNN(20), TNR(26), TNXB(19), VWF(17) 59322772 632 158 631 184 171 249 42 98 72 0 0.22 1.00 1.00 237 SMOOTH_MUSCLE_CONTRACTION ACTA1, ACTA2, ACTC, ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ADM, ADMR, ARRB1, ARRB2, ATF1, ATF2, ATF3, ATF4, ATF5, ATP2A2, ATP2A3, CACNB3, CALCA, CALM1, CALM2, CALM3, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CMKOR1, CNN1, CNN2, CORIN, CREB3, CREBL1, CREBL1, TNXB, CRH, CRHR1, DGKZ, EDG2, ETS2, FOS, GABPA, GABPB2, GBA2, GJA1, GNAQ, GNB1, GNB2, GNB3, GNB4, GNB5, GNG12, GNG13, GNG2, GNG3, GNG4, GNG5, GNG7, GNGT1, GRK4, GRK5, GRK6, GSTO1, GUCA2A, GUCA2B, GUCY1A3, HEAB, IGFBP1, IGFBP2, IGFBP3, IGFBP4, IGFBP6, IL1B, IL6, ITPR1, ITPR2, ITPR3, JUN, LGR7, LGR8, MAFF, MGC11266, MYL2, MYL4, MYLK2, NFKB1, NOS1, NOS3, OXT, OXTR, PDE4B, PDE4D, PKIA, PKIB, PKIG, PLCB3, PLCD1, PLCG1, PLCG2, PRKACA, PRKACB, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCH, PRKCQ, PRKCZ, PRKD1, RAMP1, RAMP2, RAMP3, RCP9, RGS1, RGS10, RGS11, RGS14, RGS16, RGS17, RGS18, RGS19, RGS2, RGS20, RGS3, RGS4, RGS5, RGS6, RGS7, RGS9, RLN1, RYR1, RYR2, RYR3, SARA1, SFN, SLC8A1, SP1, USP5, YWHAB, YWHAH, YWHAQ, YWHAQ, MIB1 138 ACTA1(3), ADCY1(10), ADCY2(17), ADCY3(7), ADCY4(4), ADCY5(1), ADCY6(2), ADCY7(7), ADCY8(18), ADCY9(3), ARRB1(2), ATF2(3), ATF3(1), ATF4(2), ATP2A2(3), ATP2A3(3), CACNB3(2), CALM2(1), CAMK2A(1), CAMK2B(2), CAMK2D(1), CNN1(2), CORIN(11), CREB3(2), CRHR1(3), DGKZ(4), FOS(2), GABPA(2), GABPB2(2), GJA1(4), GNB1(1), GNB2(2), GNB3(2), GNB4(3), GNB5(1), GNG12(1), GNG4(2), GNG5(1), GRK4(1), GRK5(1), GRK6(1), GSTO1(1), GUCY1A3(7), IGFBP3(2), IGFBP6(2), IL1B(1), IL6(1), ITPR1(6), ITPR2(13), ITPR3(4), JUN(3), MIB1(2), MYL2(2), MYL4(1), MYLK2(3), NFKB1(2), NOS1(11), NOS3(2), OXTR(1), PDE4B(3), PDE4D(2), PKIB(1), PLCB3(4), PLCD1(1), PLCG1(3), PLCG2(4), PRKACB(3), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PRKCA(5), PRKCD(2), PRKCE(3), PRKCQ(4), PRKCZ(1), PRKD1(11), RAMP2(1), RGS1(3), RGS10(1), RGS11(1), RGS16(1), RGS17(2), RGS18(1), RGS19(1), RGS20(1), RGS3(5), RGS5(2), RGS6(5), RGS7(13), RGS9(2), RYR1(27), RYR2(112), RYR3(50), SFN(2), SLC8A1(15), SP1(2), TNXB(19), USP5(2), YWHAB(1), YWHAQ(1) 46797802 528 157 522 155 136 197 40 98 55 2 0.063 1.00 1.00 238 HSA04810_REGULATION_OF_ACTIN_CYTOSKELETON Genes involved in regulation of actin cytoskeleton ABI2, ACTN1, ACTN2, ACTN3, ACTN4, APC, APC2, ARAF, ARHGEF1, ARHGEF12, ARHGEF4, ARHGEF6, ARHGEF7, ARPC1A, ARPC1B, ARPC2, ARPC3, ARPC4, ARPC5, ARPC5L, BAIAP2, BCAR1, BDKRB1, BDKRB2, BRAF, C3orf10, CD14, CDC42, CFL1, CFL2, CHRM1, CHRM2, CHRM3, CHRM4, CHRM5, CRK, CRKL, CSK, CYFIP1, CYFIP2, DIAPH1, DIAPH2, DIAPH3, DOCK1, EGF, EGFR, EZR, F2, F2R, FGD1, FGD3, FGF1, FGF10, FGF11, FGF12, FGF13, FGF14, FGF16, FGF17, FGF18, FGF19, FGF2, FGF20, FGF21, FGF22, FGF23, FGF3, FGF4, FGF5, FGF6, FGF7, FGF8, FGF9, FGFR1, FGFR2, FGFR3, FGFR4, FN1, GIT1, GNA12, GNA13, GNG12, GRLF1, GSN, HRAS, INS, IQGAP1, IQGAP2, IQGAP3, ITGA1, ITGA10, ITGA11, ITGA2, ITGA2B, ITGA3, ITGA4, ITGA5, ITGA6, ITGA7, ITGA8, ITGA9, ITGAD, ITGAE, ITGAL, ITGAM, ITGAV, ITGAX, ITGB1, ITGB2, ITGB3, ITGB4, ITGB5, ITGB6, ITGB7, ITGB8, KRAS, LIMK1, LIMK2, LOC200025, LOC645126, LOC653888, MAP2K1, MAP2K2, MAPK1, MAPK3, MLCK, MOS, MRAS, MRCL3, MRLC2, MSN, MYH10, MYH14, MYH9, MYL2, MYL5, MYL7, MYL8P, MYL9, MYLC2PL, MYLK, MYLK2, MYLPF, NCKAP1, NCKAP1L, NRAS, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PDGFA, PDGFB, PDGFRA, PDGFRB, PFN1, PFN2, PFN3, PFN4, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PIP4K2A, PIP4K2B, PIP4K2C, PIP5K1A, PIP5K1B, PIP5K1C, PIP5K3, PPP1CA, PPP1CB, PPP1CC, PPP1R12A, PPP1R12B, PTK2, PXN, RAC1, RAC2, RAC3, RAF1, RDX, RHOA, ROCK1, ROCK2, RRAS, RRAS2, SCIN, SLC9A1, SOS1, SOS2, SSH1, SSH2, SSH3, TIAM1, TIAM2, TMSB4X, TMSB4Y, TMSL3, VAV1, VAV2, VAV3, VCL, WAS, WASF1, WASF2, WASL 202 ACTN1(2), ACTN2(9), ACTN3(2), ACTN4(5), APC(9), APC2(2), ARAF(3), ARHGEF1(2), ARHGEF12(5), ARHGEF4(3), ARHGEF6(2), ARHGEF7(3), ARPC1A(4), BAIAP2(2), BCAR1(6), BDKRB1(2), BDKRB2(3), BRAF(8), CD14(2), CDC42(1), CFL1(2), CFL2(1), CHRM2(8), CHRM3(5), CHRM4(1), CHRM5(3), CRKL(1), CYFIP1(5), CYFIP2(6), DIAPH1(1), DIAPH2(4), DIAPH3(5), DOCK1(4), EGF(6), EGFR(7), F2R(2), FGD1(3), FGD3(2), FGF10(2), FGF12(3), FGF14(2), FGF18(1), FGF2(2), FGF22(1), FGF23(2), FGF3(1), FGF5(2), FGF6(2), FGF8(1), FGFR1(1), FGFR2(4), FGFR3(4), FGFR4(2), FN1(21), GIT1(1), GNA12(2), GNA13(1), GNG12(1), GRLF1(13), GSN(2), HRAS(4), IQGAP1(8), IQGAP2(6), IQGAP3(11), ITGA1(4), ITGA10(8), ITGA11(6), ITGA2(5), ITGA2B(2), ITGA3(1), ITGA4(4), ITGA5(2), ITGA6(7), ITGA7(4), ITGA8(13), ITGA9(2), ITGAD(8), ITGAE(4), ITGAL(1), ITGAM(7), ITGAV(4), ITGAX(9), ITGB1(5), ITGB2(5), ITGB3(4), ITGB4(8), ITGB6(1), ITGB7(1), ITGB8(4), KRAS(2), LIMK2(2), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK3(1), MOS(4), MRAS(2), MSN(4), MYH10(1), MYH14(6), MYH9(13), MYL2(2), MYL9(1), MYLK(8), MYLK2(3), MYLPF(1), NCKAP1(7), NCKAP1L(12), NRAS(1), PAK1(2), PAK2(1), PAK3(1), PAK4(1), PAK7(6), PDGFB(1), PDGFRA(10), PDGFRB(6), PFN2(1), PFN3(1), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PIP4K2A(3), PIP4K2B(2), PIP4K2C(3), PIP5K1A(4), PIP5K1B(2), PIP5K1C(2), PPP1R12B(5), PTK2(6), PXN(3), RAC1(1), RAF1(1), RDX(2), ROCK1(5), ROCK2(3), RRAS2(2), SCIN(1), SLC9A1(3), SOS1(11), SOS2(7), SSH1(1), SSH2(8), SSH3(1), TIAM1(11), TIAM2(5), VAV1(7), VAV2(4), VAV3(1), VCL(2), WAS(4), WASF1(1), WASL(2) 73858430 612 155 608 183 185 204 28 122 73 0 0.21 1.00 1.00 239 HSA04360_AXON_GUIDANCE Genes involved in axon guidance ABL1, ABLIM1, ABLIM2, ABLIM3, ARHGEF12, CDC42, CDK5, CFL1, CFL2, CHP, CXCL12, CXCR4, DCC, DPYSL2, DPYSL5, EFNA1, EFNA2, EFNA3, EFNA4, EFNA5, EFNB1, EFNB2, EFNB3, EPHA1, EPHA2, EPHA3, EPHA4, EPHA5, EPHA6, EPHA7, EPHA8, EPHB1, EPHB2, EPHB3, EPHB4, EPHB6, FES, FYN, GNAI1, GNAI2, GNAI3, GSK3B, HRAS, ITGB1, KRAS, L1CAM, LIMK1, LIMK2, LRRC4C, MAPK1, MAPK3, MET, NCK1, NCK2, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NGEF, NRAS, NRP1, NTN1, NTN2L, NTN4, NTNG1, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PLXNA1, PLXNA2, PLXNA3, PLXNB1, PLXNB2, PLXNB3, PLXNC1, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PTK2, RAC1, RAC2, RAC3, RASA1, RGS3, RHOA, RHOD, RND1, ROBO1, ROBO2, ROBO3, ROCK1, ROCK2, SEMA3A, SEMA3B, SEMA3C, SEMA3D, SEMA3E, SEMA3F, SEMA3G, SEMA4A, SEMA4B, SEMA4C, SEMA4D, SEMA4F, SEMA4G, SEMA5A, SEMA5B, SEMA6A, SEMA6B, SEMA6C, SEMA6D, SEMA7A, SLIT1, SLIT2, SLIT3, SRGAP1, SRGAP2, SRGAP3, UNC5A, UNC5B, UNC5C, UNC5D 126 ABL1(3), ABLIM1(2), ABLIM2(2), ABLIM3(3), ARHGEF12(5), CDC42(1), CDK5(1), CFL1(2), CFL2(1), CHP(2), CXCR4(5), DCC(14), DPYSL2(1), DPYSL5(8), EFNA3(1), EFNB1(3), EFNB2(2), EPHA1(3), EPHA2(2), EPHA3(11), EPHA4(1), EPHA5(15), EPHA6(14), EPHA7(9), EPHA8(6), EPHB1(13), EPHB2(5), EPHB3(8), EPHB4(3), EPHB6(4), FYN(5), GNAI1(3), GNAI3(1), HRAS(4), ITGB1(5), KRAS(2), L1CAM(2), LIMK2(2), MAPK1(1), MAPK3(1), MET(4), NCK1(2), NCK2(1), NFAT5(3), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), NGEF(1), NRAS(1), NRP1(5), NTN1(3), NTN4(2), NTNG1(1), PAK1(2), PAK2(1), PAK3(1), PAK4(1), PAK7(6), PLXNA1(11), PLXNA2(2), PLXNA3(5), PLXNB1(3), PLXNB2(4), PLXNB3(4), PLXNC1(9), PPP3CA(4), PPP3CB(4), PPP3CC(2), PPP3R1(1), PPP3R2(4), PTK2(6), RAC1(1), RASA1(8), RGS3(5), ROBO1(9), ROBO2(9), ROBO3(7), ROCK1(5), ROCK2(3), SEMA3A(4), SEMA3B(1), SEMA3C(5), SEMA3D(3), SEMA3E(5), SEMA3F(3), SEMA3G(3), SEMA4A(1), SEMA4B(1), SEMA4C(2), SEMA4D(1), SEMA4F(6), SEMA5A(9), SEMA5B(6), SEMA6B(1), SEMA6C(5), SEMA6D(8), SEMA7A(1), SLIT1(5), SLIT2(15), SLIT3(9), SRGAP1(6), SRGAP2(5), SRGAP3(5), UNC5A(5), UNC5B(2), UNC5C(7), UNC5D(19) 52678210 474 153 474 182 107 181 32 86 68 0 0.95 1.00 1.00 240 GPCRDB_CLASS_A_RHODOPSIN_LIKE ADORA1, ADORA2A, ADORA2B, ADORA3, ADRA1A, ADRA1B, ADRA1D, ADRA2A, ADRA2C, ADRB1, ADRB2, ADRB3, AGTR1, AGTR2, AGTRL1, AVPR1A, AVPR1B, AVPR2, BDKRB1, BDKRB2, BLR1, BRS3, C3AR1, C5R1, CCBP2, CCKAR, CCKBR, CCR1, CCR10, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CCRL1, CCRL2, CHML, CHRM1, CHRM2, CHRM3, CHRM4, CHRM5, CMKLR1, CMKOR1, CNR1, CNR2, CX3CR1, CXCR3, CXCR4, DRD1, DRD2, DRD3, DRD4, DRD5, EDNRA, EDNRB, ELA3A, F2R, F2RL1, F2RL2, F2RL3, FPR1, FPRL1, FPRL2, FSHR, GALR1, GALR2, GALR3, GALT, GHSR, GNB2L1, GPR10, GPR147, GPR17, GPR173, GPR174, GPR23, GPR24, GPR27, GPR3, GPR30, GPR35, GPR37, GPR37L1, GPR4, GPR44, GPR50, GPR6, GPR63, GPR74, GPR77, GPR83, GPR85, GPR87, GPR92, GRPR, HCRTR1, HCRTR2, HRH1, HRH2, HRH3, HTR1A, HTR1B, HTR1D, HTR1E, HTR1F, HTR2A, HTR2B, HTR2C, HTR4, HTR5A, HTR6, HTR7, HTR7, LOC93164, IL8RA, IL8RB, LHCGR, LTB4R, MAS1, MC1R, MC3R, MC4R, MC5R, MLNR, MTNR1A, MTNR1B, NMBR, NMUR1, NMUR2, NPY1R, NPY2R, NPY5R, NPY6R, NTSR1, NTSR2, OPN1SW, OPN3, OPRD1, OPRK1, OPRL1, OPRM1, OR10A5, OR11A1, OR12D3, OR1C1, OR1F1, OR1Q1, OR2H1, OR5V1, OR5V1, OR12D3, OR7A5, OR7C1, OR8B8, OXTR, P2RY1, P2RY10, P2RY11, P2RY12, P2RY13, P2RY14, P2RY2, P2RY5, P2RY6, PPYR1, PTAFR, PTGDR, PTGER1, PTGER2, PTGER4, PTGFR, PTGIR, Rgr, RGR, RHO, RRH, SSTR1, SSTR2, SSTR3, SSTR4, SUCNR1, TBXA2R, TRHR 161 ADORA1(3), ADORA2A(5), ADORA3(1), ADRA1A(2), ADRA1B(3), ADRA1D(3), ADRA2C(2), ADRB1(1), ADRB2(4), AGTR1(5), AGTR2(3), AVPR1A(3), AVPR1B(2), AVPR2(4), BDKRB1(2), BDKRB2(3), C3AR1(2), CCBP2(4), CCKAR(2), CCKBR(2), CCR1(3), CCR10(1), CCR2(1), CCR3(1), CCR4(3), CCR5(2), CCR6(2), CCR8(1), CCR9(1), CCRL1(2), CCRL2(1), CHML(2), CHRM2(8), CHRM3(5), CHRM4(1), CHRM5(3), CMKLR1(1), CNR1(5), CNR2(2), CX3CR1(3), CXCR3(1), CXCR4(5), DRD1(1), DRD2(4), DRD3(5), DRD4(1), DRD5(5), EDNRA(1), EDNRB(5), F2R(2), F2RL1(3), F2RL2(1), F2RL3(1), FPR1(1), FSHR(15), GALR1(5), GALT(1), GHSR(4), GPR17(4), GPR173(1), GPR174(6), GPR27(1), GPR35(1), GPR37(3), GPR37L1(2), GPR50(5), GPR6(2), GPR63(4), GPR77(3), GPR83(2), GPR85(2), GPR87(4), GRPR(3), HCRTR2(3), HRH1(3), HRH2(1), HRH3(1), HTR1A(7), HTR1B(3), HTR1E(5), HTR1F(2), HTR2A(3), HTR2B(1), HTR2C(4), HTR4(3), HTR5A(4), HTR6(1), HTR7(3), LHCGR(9), MAS1(3), MC3R(2), MC4R(2), MC5R(3), MLNR(2), MTNR1A(1), NMBR(3), NMUR2(1), NPY1R(3), NPY2R(4), NPY5R(4), NTSR1(4), NTSR2(3), OPN1SW(3), OPN3(2), OPRD1(2), OPRK1(1), OPRL1(2), OPRM1(6), OR10A5(2), OR11A1(4), OR12D3(4), OR1C1(9), OR1F1(1), OR1Q1(2), OR2H1(2), OR5V1(3), OR8B8(6), OXTR(1), P2RY1(3), P2RY10(5), P2RY13(1), P2RY14(3), P2RY2(3), P2RY6(2), PPYR1(4), PTAFR(3), PTGDR(5), PTGER2(2), PTGER4(2), PTGFR(5), PTGIR(1), RGR(1), RHO(1), SSTR1(3), SSTR2(2), SSTR3(2), SSTR4(2), SUCNR1(2), TBXA2R(2), TRHR(2) 32267662 402 152 402 155 80 167 27 84 44 0 0.36 1.00 1.00 241 STRIATED_MUSCLE_CONTRACTION ACTA1, ACTA2, ACTC, ACTN2, ACTN3, ACTN4, C9orf97, DES, DES, FAM48A, DMD, MYBPC1, MYBPC2, MYBPC3, MYH3, MYH6, MYH6, MYH7, MYH8, MYL1, MYL2, MYL3, MYL4, MYL9, MYOM1, NEB, TCAP, TMOD1, TNNC2, TNNI1, TNNI2, TNNI3, TNNT1, TNNT2, TNNT3, TPM1, TPM2, TPM3, TPM4, TPM4, TTN, VIM 37 ACTA1(3), ACTN2(9), ACTN3(2), ACTN4(5), DES(3), DMD(34), FAM48A(2), MYBPC1(9), MYBPC3(5), MYH3(6), MYH6(14), MYH7(13), MYH8(24), MYL1(3), MYL2(2), MYL3(2), MYL4(1), MYL9(1), MYOM1(11), NEB(30), TNNI2(2), TNNI3(2), TNNT1(1), TNNT2(2), TNNT3(3), TPM1(1), TPM3(1), TTN(332), VIM(6) 36986086 529 150 527 161 143 194 36 99 54 3 0.83 1.00 1.00 242 HSA04310_WNT_SIGNALING_PATHWAY Genes involved in Wnt signaling pathway APC, APC2, AXIN1, AXIN2, BTRC, CACYBP, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CCND1, CCND2, CCND3, CER1, CHD8, CHP, CREBBP, CSNK1A1, CSNK1A1L, CSNK1E, CSNK2A1, CSNK2A2, CSNK2B, CTBP1, CTBP2, CTNNB1, CTNNBIP1, CUL1, CXXC4, DAAM1, DAAM2, DKK1, DKK2, DKK4, DVL1, DVL2, DVL3, EP300, FBXW11, FOSL1, FRAT1, FRAT2, FZD1, FZD10, FZD2, FZD3, FZD4, FZD5, FZD6, FZD7, FZD8, FZD9, GSK3B, JUN, LEF1, LOC652788, LRP5, LRP6, MAP3K7, MAPK10, MAPK8, MAPK9, MMP7, MYC, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NKD1, NKD2, NLK, PLCB1, PLCB2, PLCB3, PLCB4, PORCN, PPARD, PPP2CA, PPP2CB, PPP2R1A, PPP2R1B, PPP2R2A, PPP2R2B, PPP2R2C, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRICKLE1, PRICKLE2, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKX, PRKY, PSEN1, RAC1, RAC2, RAC3, RBX1, RHOA, ROCK1, ROCK2, RUVBL1, SENP2, SFRP1, SFRP2, SFRP4, SFRP5, SIAH1, SKP1, SMAD2, SMAD3, SMAD4, SOX17, TBL1X, TBL1XR1, TBL1Y, TCF7, TCF7L1, TCF7L2, TP53, VANGL1, VANGL2, WIF1, WNT1, WNT10A, WNT10B, WNT11, WNT16, WNT2, WNT2B, WNT3, WNT3A, WNT4, WNT5A, WNT5B, WNT6, WNT7A, WNT7B, WNT8A, WNT8B, WNT9A, WNT9B 143 APC(9), APC2(2), AXIN2(2), BTRC(1), CACYBP(1), CAMK2A(1), CAMK2B(2), CAMK2D(1), CCND1(1), CCND2(3), CCND3(1), CER1(2), CHD8(9), CHP(2), CREBBP(17), CSNK1A1(2), CSNK1A1L(5), CSNK2A1(3), CTBP1(2), CTNNB1(4), CUL1(4), CXXC4(1), DAAM1(1), DAAM2(7), DKK1(4), DKK2(1), DVL1(3), DVL3(2), EP300(9), FBXW11(1), FOSL1(1), FZD1(1), FZD10(2), FZD2(1), FZD3(5), FZD4(1), FZD6(3), FZD7(2), FZD8(1), FZD9(2), JUN(3), LEF1(3), LRP5(6), LRP6(5), MAP3K7(2), MAPK10(1), MAPK8(2), MAPK9(1), MYC(1), NFAT5(3), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), NKD1(2), NKD2(2), NLK(2), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), PORCN(2), PPARD(2), PPP2R1A(8), PPP2R1B(2), PPP2R2A(1), PPP2R2B(1), PPP2R2C(2), PPP3CA(4), PPP3CB(4), PPP3CC(2), PPP3R1(1), PPP3R2(4), PRICKLE1(7), PRICKLE2(3), PRKACB(3), PRKACG(1), PRKCA(5), PRKCG(9), PRKX(1), PSEN1(3), RAC1(1), RBX1(1), ROCK1(5), ROCK2(3), RUVBL1(4), SENP2(3), SFRP1(1), SFRP4(4), SFRP5(1), SIAH1(1), SKP1(1), SMAD2(2), SMAD3(1), SMAD4(5), TBL1XR1(2), TBL1Y(2), TCF7(1), TCF7L2(1), VANGL1(1), VANGL2(2), WIF1(5), WNT1(1), WNT10A(1), WNT10B(4), WNT11(1), WNT2(3), WNT2B(3), WNT3(2), WNT3A(2), WNT5A(1), WNT6(2), WNT7A(3), WNT7B(1), WNT8A(2), WNT9A(1), WNT9B(1) 43197752 334 143 332 117 88 138 25 45 38 0 0.81 1.00 1.00 243 HSA04060_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION Genes involved in cytokine-cytokine receptor interaction ACVR1, ACVR1B, ACVR2A, ACVR2B, AMH, AMHR2, BMP2, BMP7, BMPR1A, BMPR1B, BMPR2, CCL1, CCL11, CCL13, CCL14, CCL15, CCL16, CCL17, CCL18, CCL19, CCL2, CCL20, CCL21, CCL22, CCL23, CCL24, CCL25, CCL26, CCL27, CCL28, CCL3, CCL4, CCL5, CCL7, CCL8, CCR1, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CCR9, CD27, CD40, CD40LG, CD70, CLCF1, CNTF, CNTFR, CRLF2, CSF1, CSF1R, CSF2, CSF2RA, CSF2RB, CSF3, CSF3R, CTF1, CX3CL1, CX3CR1, CXCL1, CXCL10, CXCL11, CXCL12, CXCL13, CXCL14, CXCL16, CXCL2, CXCL3, CXCL5, CXCL6, CXCL9, CXCR3, CXCR4, CXCR6, EDA, EDA2R, EDAR, EGF, EGFR, EPO, EPOR, FAS, FASLG, FLJ78302, FLT1, FLT3, FLT3LG, FLT4, GDF5, GH1, GH2, GHR, HGF, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, IFNAR1, IFNAR2, IFNB1, IFNE1, IFNG, IFNGR1, IFNGR2, IFNK, IFNW1, IL10, IL10RA, IL10RB, IL11, IL11RA, IL12A, IL12B, IL12RB1, IL12RB2, IL13, IL13RA1, IL15, IL15RA, IL17A, IL17B, IL17RA, IL17RB, IL18, IL18R1, IL18RAP, IL19, IL1A, IL1B, IL1R1, IL1R2, IL1RAP, IL2, IL20, IL20RA, IL21, IL21R, IL22, IL22RA1, IL22RA2, IL23A, IL23R, IL24, IL25, IL26, IL28A, IL28B, IL28RA, IL29, IL2RA, IL2RB, IL2RG, IL3, IL3RA, IL4, IL4R, IL5, IL5RA, IL6, IL6R, IL6ST, IL7, IL7R, IL8, IL8RA, IL8RB, IL9, IL9R, INHBA, INHBB, INHBC, INHBE, KDR, KIT, KITLG, LEP, LEPR, LIF, LIFR, LOC728045, LTA, LTB, LTBR, MET, MPL, NGFR, OSM, OSMR, PDGFB, PDGFC, PDGFRA, PDGFRB, PF4, PF4V1, PLEKHO2, PPBP, PRL, PRLR, RELT, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, TNF, TNFRSF10A, TNFRSF10B, TNFRSF10C, TNFRSF10D, TNFRSF11A, TNFRSF11B, TNFRSF12A, TNFRSF13B, TNFRSF13C, TNFRSF14, TNFRSF17, TNFRSF18, TNFRSF19, TNFRSF1A, TNFRSF1B, TNFRSF21, TNFRSF25, TNFRSF4, TNFRSF6B, TNFRSF8, TNFRSF9, TNFSF10, TNFSF11, TNFSF12, TNFSF13, TNFSF13B, TNFSF14, TNFSF15, TNFSF18, TNFSF4, TNFSF8, TNFSF9, TPO, TSLP, VEGFA, VEGFB, VEGFC, XCL1, XCL2, XCR1 249 ACVR1B(3), ACVR2A(4), AMHR2(7), BMPR1A(3), BMPR1B(1), BMPR2(1), CCL14(2), CCL16(1), CCL20(1), CCL26(2), CCL28(1), CCL3(2), CCL7(1), CCR1(3), CCR2(1), CCR3(1), CCR4(3), CCR5(2), CCR6(2), CCR8(1), CCR9(1), CD27(1), CD40(2), CD40LG(3), CNTFR(1), CSF1(2), CSF1R(3), CSF2RA(7), CSF2RB(5), CSF3R(7), CX3CR1(3), CXCL14(1), CXCL5(2), CXCR3(1), CXCR4(5), EDA2R(1), EDAR(2), EGF(6), EGFR(7), EPOR(2), FAS(1), FASLG(1), FLT1(11), FLT3(7), FLT4(5), GDF5(4), GH1(2), GH2(5), GHR(3), HGF(10), IFNA1(1), IFNA14(2), IFNA16(2), IFNA17(1), IFNA4(1), IFNA6(1), IFNA7(1), IFNA8(2), IFNAR1(2), IFNB1(2), IFNG(1), IFNGR1(4), IFNGR2(1), IL10(2), IL10RA(2), IL11RA(1), IL12A(1), IL12B(3), IL12RB1(3), IL12RB2(4), IL13RA1(2), IL17A(1), IL17RA(6), IL18R1(2), IL18RAP(4), IL19(1), IL1A(1), IL1B(1), IL1R1(1), IL1R2(3), IL1RAP(2), IL20RA(1), IL21(1), IL21R(3), IL22(2), IL22RA2(1), IL23R(2), IL28B(2), IL28RA(1), IL2RB(2), IL2RG(1), IL3(1), IL4(2), IL4R(2), IL5RA(3), IL6(1), IL6R(1), IL6ST(1), IL7(1), IL7R(8), IL9R(6), INHBA(5), INHBB(1), INHBC(1), KDR(15), KIT(7), LEPR(15), LIFR(3), LTA(2), LTBR(1), MET(4), MPL(2), NGFR(1), OSMR(5), PDGFB(1), PDGFC(2), PDGFRA(10), PDGFRB(6), PF4(1), PLEKHO2(5), PRL(1), PRLR(6), TGFB1(1), TGFB2(3), TGFBR2(3), TNF(1), TNFRSF10A(1), TNFRSF10B(1), TNFRSF11A(2), TNFRSF11B(1), TNFRSF13B(1), TNFRSF17(1), TNFRSF18(1), TNFRSF19(1), TNFRSF1A(2), TNFRSF1B(1), TNFRSF21(3), TNFRSF6B(1), TNFRSF8(1), TNFRSF9(1), TNFSF11(1), TNFSF13(1), TNFSF14(1), TNFSF15(1), TNFSF18(1), TPO(10), VEGFC(6), XCL1(1), XCR1(2) 47446434 400 139 398 156 97 146 24 81 52 0 0.98 1.00 1.00 244 HSA04540_GAP_JUNCTION Genes involved in gap junction ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ADRB1, CDC2, CSNK1D, DRD1, DRD2, EDG2, EGF, EGFR, GJA1, GJD2, GNA11, GNAI1, GNAI2, GNAI3, GNAQ, GNAS, GRB2, GRM1, GRM5, GUCY1A2, GUCY1A3, GUCY1B3, GUCY2C, GUCY2D, GUCY2F, HRAS, HTR2A, HTR2B, HTR2C, ITPR1, ITPR2, ITPR3, KRAS, LOC643224, LOC654264, MAP2K1, MAP2K2, MAP2K5, MAP3K2, MAPK1, MAPK3, MAPK7, NPR1, NPR2, NRAS, PDGFA, PDGFB, PDGFC, PDGFD, PDGFRA, PDGFRB, PLCB1, PLCB2, PLCB3, PLCB4, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKG1, PRKG2, PRKX, PRKY, RAF1, SOS1, SOS2, SRC, TJP1, TUBA1A, TUBA1B, TUBA1C, TUBA3C, TUBA3D, TUBA3E, TUBA4A, TUBA8, TUBAL3, TUBB, TUBB1, TUBB2A, TUBB2B, TUBB2C, TUBB3, TUBB4, TUBB4Q, TUBB6, TUBB8 91 ADCY1(10), ADCY2(17), ADCY3(7), ADCY4(4), ADCY5(1), ADCY6(2), ADCY7(7), ADCY8(18), ADCY9(3), ADRB1(1), CSNK1D(2), DRD1(1), DRD2(4), EGF(6), EGFR(7), GJA1(4), GJD2(2), GNA11(1), GNAI1(3), GNAI3(1), GNAS(6), GRM1(12), GRM5(12), GUCY1A3(7), GUCY1B3(4), GUCY2C(5), GUCY2D(2), GUCY2F(6), HRAS(4), HTR2A(3), HTR2B(1), HTR2C(4), ITPR1(6), ITPR2(13), ITPR3(4), KRAS(2), MAP2K1(2), MAP2K2(1), MAP2K5(1), MAPK1(1), MAPK3(1), MAPK7(1), NPR1(3), NPR2(4), NRAS(1), PDGFB(1), PDGFC(2), PDGFD(1), PDGFRA(10), PDGFRB(6), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), PRKACB(3), PRKACG(1), PRKCA(5), PRKCG(9), PRKG1(6), PRKG2(4), PRKX(1), RAF1(1), SOS1(11), SOS2(7), TJP1(9), TUBA1A(1), TUBA1B(1), TUBA1C(2), TUBA3C(7), TUBA3D(2), TUBA3E(5), TUBA4A(1), TUBA8(1), TUBAL3(3), TUBB(1), TUBB1(1), TUBB2A(2), TUBB3(2), TUBB4(4), TUBB4Q(2), TUBB8(1) 35071696 344 139 342 96 84 124 29 66 41 0 0.068 1.00 1.00 245 HSA00230_PURINE_METABOLISM Genes involved in purine metabolism ADA, ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ADK, ADSL, ADSS, ADSSL1, AK1, AK2, AK3L1, AK5, AK7, ALLC, AMPD1, AMPD2, AMPD3, APRT, ATIC, CANT1, DCK, DGUOK, ECGF1, ENPP1, ENPP3, ENTPD1, ENTPD2, ENTPD3, ENTPD4, ENTPD5, ENTPD6, ENTPD8, FHIT, GART, GDA, GMPR, GMPR2, GMPS, GUCY1A2, GUCY1A3, GUCY1B3, GUCY2C, GUCY2D, GUCY2F, GUK1, HPRT1, IMPDH1, IMPDH2, ITPA, NME1, NME2, NME4, NME6, NME7, NP, NPR1, NPR2, NT5C, NT5C1A, NT5C1B, NT5C2, NT5C3, NT5E, NT5M, NUDT2, NUDT5, NUDT9, PAICS, PAPSS1, PAPSS2, PDE10A, PDE11A, PDE1A, PDE1C, PDE2A, PDE3B, PDE4A, PDE4B, PDE4C, PDE4D, PDE5A, PDE6D, PDE6G, PDE6H, PDE7A, PDE7B, PDE8A, PDE8B, PDE9A, PFAS, PKLR, PKM2, PNPT1, POLA1, POLA2, POLD1, POLD2, POLD3, POLD4, POLE, POLE2, POLE3, POLE4, POLR1A, POLR1B, POLR1C, POLR1D, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLR3A, POLR3B, POLR3G, POLR3GL, POLR3H, POLR3K, PPAT, PRIM1, PRIM2, PRPS1, PRPS1L1, PRPS2, PRUNE, RFC5, RRM1, RRM2, RRM2B, SAC, XDH, ZNRD1 140 ADCY1(10), ADCY2(17), ADCY3(7), ADCY4(4), ADCY5(1), ADCY6(2), ADCY7(7), ADCY8(18), ADCY9(3), ADSL(1), ADSS(1), ADSSL1(2), AK2(1), AK5(7), AK7(3), ALLC(3), AMPD1(4), AMPD2(1), AMPD3(7), ATIC(1), CANT1(1), DCK(1), ENPP1(8), ENPP3(6), ENTPD1(1), ENTPD2(2), ENTPD3(1), ENTPD5(1), ENTPD6(4), ENTPD8(1), GART(3), GDA(7), GUCY1A3(7), GUCY1B3(4), GUCY2C(5), GUCY2D(2), GUCY2F(6), GUK1(2), HPRT1(1), IMPDH1(2), IMPDH2(1), NME4(1), NME7(3), NPR1(3), NPR2(4), NT5C1A(2), NT5C1B(2), NT5C2(3), NT5C3(3), NT5E(2), NUDT9(2), PAPSS2(1), PDE10A(9), PDE11A(10), PDE1A(2), PDE1C(12), PDE2A(4), PDE3B(5), PDE4A(1), PDE4B(3), PDE4C(4), PDE4D(2), PDE5A(4), PDE6H(2), PDE7A(1), PDE7B(1), PDE8A(5), PDE8B(3), PDE9A(2), PFAS(6), PKLR(4), PKM2(3), PNPT1(2), POLA1(6), POLD1(2), POLD2(1), POLD3(1), POLE(7), POLE2(2), POLE4(1), POLR1A(3), POLR1B(2), POLR1D(1), POLR2A(2), POLR2B(6), POLR2D(1), POLR2E(2), POLR3A(1), POLR3B(2), POLR3G(1), POLR3H(2), PPAT(2), PRIM1(3), PRPS1(2), PRPS1L1(3), PRPS2(1), RFC5(1), RRM1(1), RRM2(1), RRM2B(3), XDH(10) 43321996 347 137 347 123 93 136 18 51 49 0 0.77 1.00 1.00 246 HSA04514_CELL_ADHESION_MOLECULES Genes involved in cell adhesion molecules (CAMs) ALCAM, CADM1, CADM3, CD2, CD22, CD226, CD274, CD276, CD28, CD34, CD4, CD40, CD40LG, CD58, CD6, CD80, CD86, CD8A, CD8B, CD99, CDH1, CDH15, CDH2, CDH3, CDH4, CDH5, CLDN1, CLDN10, CLDN11, CLDN14, CLDN15, CLDN16, CLDN17, CLDN18, CLDN19, CLDN2, CLDN20, CLDN22, CLDN23, CLDN3, CLDN4, CLDN5, CLDN6, CLDN7, CLDN8, CLDN9, CNTN1, CNTN2, CNTNAP1, CNTNAP2, CTLA4, ESAM, F11R, GLG1, HLA-A, HLA-A29.1, HLA-B, HLA-C, HLA-DMA, HLA-DMB, HLA-DOA, HLA-DOB, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2, HLA-DRA, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, HLA-E, HLA-F, HLA-G, ICAM1, ICAM2, ICAM3, ICOS, ICOSLG, ITGA4, ITGA6, ITGA8, ITGA9, ITGAL, ITGAM, ITGAV, ITGB1, ITGB2, ITGB7, ITGB8, JAM2, JAM3, L1CAM, MADCAM1, MAG, MPZ, MPZL1, NCAM1, NCAM2, NEGR1, NEO1, NFASC, NLGN1, NLGN2, NLGN3, NRCAM, NRXN1, NRXN2, NRXN3, OCLN, PDCD1, PDCD1LG2, PECAM1, PTPRC, PTPRF, PTPRM, PVR, PVRL1, PVRL2, PVRL3, SDC1, SDC2, SDC3, SDC4, SELE, SELL, SELP, SELPLG, SIGLEC1, SPN, VCAM1, VCAN 128 ALCAM(3), CADM1(2), CADM3(4), CD2(1), CD22(6), CD226(5), CD276(2), CD34(2), CD4(1), CD40(2), CD40LG(3), CD58(1), CD6(2), CD80(3), CD86(3), CD8A(2), CD8B(1), CD99(2), CDH1(3), CDH15(2), CDH2(10), CDH3(1), CDH4(6), CDH5(2), CLDN1(2), CLDN10(4), CLDN11(1), CLDN15(1), CLDN16(4), CLDN17(1), CLDN18(1), CLDN19(1), CLDN2(1), CLDN22(1), CLDN3(1), CLDN4(1), CLDN5(1), CLDN6(2), CLDN8(1), CLDN9(3), CNTN1(12), CNTN2(1), CNTNAP1(4), CNTNAP2(30), CTLA4(1), ESAM(4), F11R(1), GLG1(3), HLA-B(1), HLA-C(1), HLA-DMA(1), HLA-DMB(1), HLA-DOA(1), HLA-DOB(1), HLA-DPA1(2), HLA-DQA2(1), HLA-DRA(1), HLA-DRB1(2), HLA-DRB5(2), HLA-G(2), ICAM1(2), ICAM3(2), ICOS(2), ITGA4(4), ITGA6(7), ITGA8(13), ITGA9(2), ITGAL(1), ITGAM(7), ITGAV(4), ITGB1(5), ITGB2(5), ITGB7(1), ITGB8(4), JAM2(2), L1CAM(2), MADCAM1(1), MAG(4), NCAM1(4), NCAM2(13), NEGR1(2), NEO1(8), NFASC(7), NLGN1(14), NLGN2(1), NLGN3(4), NRCAM(6), NRXN1(22), NRXN2(10), NRXN3(10), PDCD1(2), PTPRC(7), PTPRF(6), PTPRM(6), PVR(1), PVRL1(3), PVRL3(3), SDC1(1), SDC2(2), SDC3(2), SELE(4), SELL(2), SELP(11), SELPLG(1), SIGLEC1(9), VCAM1(5), VCAN(23) 39395672 424 137 423 165 134 147 32 76 35 0 0.96 1.00 1.00 247 HSA04630_JAK_STAT_SIGNALING_PATHWAY Genes involved in Jak-STAT signaling pathway AKT1, AKT2, AKT3, BCL2L1, CBL, CBLB, CBLC, CCND1, CCND2, CCND3, CISH, CLCF1, CNTF, CNTFR, CREBBP, CRLF2, CSF2, CSF2RA, CSF2RB, CSF3, CSF3R, CTF1, EP300, EPO, EPOR, GH1, GH2, GHR, GRB2, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, IFNAR1, IFNAR2, IFNB1, IFNE1, IFNG, IFNGR1, IFNGR2, IFNK, IFNW1, IL10, IL10RA, IL10RB, IL11, IL11RA, IL12A, IL12B, IL12RB1, IL12RB2, IL13, IL13RA1, IL13RA2, IL15, IL15RA, IL19, IL2, IL20, IL20RA, IL21, IL21R, IL22, IL22RA1, IL22RA2, IL23A, IL23R, IL24, IL26, IL28A, IL28B, IL28RA, IL29, IL2RA, IL2RB, IL2RG, IL3, IL3RA, IL4, IL4R, IL5, IL5RA, IL6, IL6R, IL6ST, IL7, IL7R, IL9, IL9R, IRF9, JAK1, JAK2, JAK3, LEP, LEPR, LIF, LIFR, MPL, MYC, OSM, OSMR, PIAS1, PIAS2, PIAS3, PIAS4, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PIM1, PRL, PRLR, PTPN11, PTPN6, SOCS1, SOCS2, SOCS3, SOCS4, SOCS5, SOCS7, SOS1, SOS2, SPRED1, SPRED2, SPRY1, SPRY2, SPRY3, SPRY4, STAM, STAM2, STAT1, STAT2, STAT3, STAT4, STAT5A, STAT5B, STAT6, TPO, TSLP, TYK2 148 AKT1(1), AKT3(3), BCL2L1(1), CBL(3), CBLB(7), CCND1(1), CCND2(3), CCND3(1), CNTFR(1), CREBBP(17), CSF2RA(7), CSF2RB(5), CSF3R(7), EP300(9), EPOR(2), GH1(2), GH2(5), GHR(3), IFNA1(1), IFNA14(2), IFNA16(2), IFNA17(1), IFNA4(1), IFNA6(1), IFNA7(1), IFNA8(2), IFNAR1(2), IFNB1(2), IFNG(1), IFNGR1(4), IFNGR2(1), IL10(2), IL10RA(2), IL11RA(1), IL12A(1), IL12B(3), IL12RB1(3), IL12RB2(4), IL13RA1(2), IL13RA2(1), IL19(1), IL20RA(1), IL21(1), IL21R(3), IL22(2), IL22RA2(1), IL23R(2), IL28B(2), IL28RA(1), IL2RB(2), IL2RG(1), IL3(1), IL4(2), IL4R(2), IL5RA(3), IL6(1), IL6R(1), IL6ST(1), IL7(1), IL7R(8), IL9R(6), JAK1(2), JAK2(4), JAK3(7), LEPR(15), LIFR(3), MPL(2), MYC(1), OSMR(5), PIAS1(5), PIAS2(2), PIAS3(3), PIAS4(2), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PIM1(2), PRL(1), PRLR(6), PTPN11(3), SOCS2(2), SOCS3(1), SOCS4(2), SOCS5(3), SOS1(11), SOS2(7), SPRED1(3), SPRED2(1), SPRY2(1), SPRY3(4), STAM(3), STAM2(2), STAT1(2), STAT2(1), STAT3(2), STAT4(5), STAT5A(2), STAT6(2), TPO(10), TYK2(8) 38172634 331 136 329 110 99 102 26 61 43 0 0.77 1.00 1.00 248 HSA04720_LONG_TERM_POTENTIATION Genes involved in long-term potentiation ADCY1, ADCY8, ARAF, ATF4, BRAF, CACNA1C, CALM1, CALM2, CALM3, CALML3, CALML6, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CAMK4, CHP, CREBBP, EP300, GNAQ, GRIA1, GRIA2, GRIN1, GRIN2A, GRIN2B, GRIN2C, GRIN2D, GRM1, GRM5, HRAS, ITPR1, ITPR2, ITPR3, KRAS, MAP2K1, MAP2K2, MAPK1, MAPK3, NRAS, PLCB1, PLCB2, PLCB3, PLCB4, PPP1CA, PPP1CB, PPP1CC, PPP1R12A, PPP1R1A, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKX, PRKY, RAF1, RAP1A, RAP1B, RAPGEF3, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA6 67 ADCY1(10), ADCY8(18), ARAF(3), ATF4(2), BRAF(8), CACNA1C(15), CALM2(1), CALML6(1), CAMK2A(1), CAMK2B(2), CAMK2D(1), CAMK4(3), CHP(2), CREBBP(17), EP300(9), GRIA1(9), GRIA2(7), GRIN1(1), GRIN2A(16), GRIN2B(18), GRIN2C(3), GRIN2D(3), GRM1(12), GRM5(12), HRAS(4), ITPR1(6), ITPR2(13), ITPR3(4), KRAS(2), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK3(1), NRAS(1), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), PPP3CA(4), PPP3CB(4), PPP3CC(2), PPP3R1(1), PPP3R2(4), PRKACB(3), PRKACG(1), PRKCA(5), PRKCG(9), PRKX(1), RAF1(1), RAP1A(1), RAP1B(1), RAPGEF3(1), RPS6KA1(2), RPS6KA2(6), RPS6KA3(1), RPS6KA6(5) 26968424 285 134 282 94 64 110 29 48 34 0 0.54 1.00 1.00 249 HSA04910_INSULIN_SIGNALING_PATHWAY Genes involved in insulin signaling pathway ACACA, ACACB, AKT1, AKT2, AKT3, ARAF, BAD, BRAF, CALM1, CALM2, CALM3, CALML3, CALML6, CBL, CBLB, CBLC, CRK, CRKL, EIF4EBP1, ELK1, EXOC7, FASN, FBP1, FBP2, FLOT1, FLOT2, FOXO1, FRAP1, G6PC, G6PC2, GCK, GRB2, GSK3B, GYS1, GYS2, HRAS, IKBKB, INPP5D, INS, INSR, IRS1, IRS2, IRS4, KIAA1303, KRAS, LIPE, MAP2K1, MAP2K2, MAPK1, MAPK10, MAPK3, MAPK8, MAPK9, MKNK1, MKNK2, NRAS, PCK1, PCK2, PDE3A, PDE3B, PDPK1, PFKL, PFKM, PFKP, PHKA1, PHKA2, PHKB, PHKG1, PHKG2, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PKLR, PKM2, PPARGC1A, PPP1CA, PPP1CB, PPP1CC, PPP1R3A, PPP1R3B, PPP1R3C, PPP1R3D, PRKAA1, PRKAA2, PRKAB1, PRKAB2, PRKACA, PRKACB, PRKACG, PRKAG1, PRKAG2, PRKAG3, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCI, PRKCZ, PRKX, PRKY, PTPN1, PTPRF, PYGB, PYGL, PYGM, RAF1, RAPGEF1, RHEB, RHOQ, RPS6, RPS6KB1, RPS6KB2, SH2B2, SHC1, SHC2, SHC3, SHC4, SKIP, SLC2A4, SOCS1, SOCS2, SOCS3, SOCS4, SORBS1, SOS1, SOS2, SREBF1, TRIP10, TSC1, TSC2 129 ACACA(2), ACACB(9), AKT1(1), AKT3(3), ARAF(3), BRAF(8), CALM2(1), CALML6(1), CBL(3), CBLB(7), CRKL(1), EXOC7(1), FASN(2), FBP2(1), FLOT1(1), FLOT2(1), G6PC(3), G6PC2(3), GCK(5), GYS1(1), GYS2(4), HRAS(4), IKBKB(2), INPP5D(8), INSR(9), IRS1(6), IRS2(2), IRS4(2), KRAS(2), LIPE(1), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK10(1), MAPK3(1), MAPK8(2), MAPK9(1), MKNK2(1), NRAS(1), PCK1(2), PCK2(1), PDE3A(7), PDE3B(5), PDPK1(1), PFKL(2), PFKM(5), PFKP(2), PHKA1(6), PHKA2(4), PHKB(6), PHKG1(2), PHKG2(1), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PKLR(4), PKM2(3), PPARGC1A(6), PPP1R3A(16), PPP1R3C(2), PPP1R3D(2), PRKAA2(5), PRKAB2(1), PRKACB(3), PRKACG(1), PRKAG2(4), PRKAG3(3), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PRKCI(5), PRKCZ(1), PRKX(1), PTPN1(1), PTPRF(6), PYGB(4), PYGM(6), RAF1(1), RAPGEF1(4), RPS6(1), RPS6KB1(1), RPS6KB2(1), SH2B2(1), SHC1(2), SHC2(4), SHC3(2), SHC4(5), SLC2A4(2), SOCS2(2), SOCS3(1), SOCS4(2), SORBS1(5), SOS1(11), SOS2(7), SREBF1(2), TRIP10(2), TSC1(5), TSC2(5) 42026512 333 134 333 116 97 116 23 47 50 0 0.73 1.00 1.00 250 HSA04912_GNRH_SIGNALING_PATHWAY Genes involved in GnRH signaling pathway ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ATF4, CACNA1C, CACNA1D, CACNA1F, CACNA1S, CALM1, CALM2, CALM3, CALML3, CALML6, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CDC42, CGA, EGFR, ELK1, FSHB, GNA11, GNAQ, GNAS, GNRH1, GNRH2, GNRHR, GRB2, HBEGF, HRAS, ITPR1, ITPR2, ITPR3, JUN, KRAS, LHB, MAP2K1, MAP2K2, MAP2K3, MAP2K4, MAP2K6, MAP2K7, MAP3K1, MAP3K2, MAP3K3, MAP3K4, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK7, MAPK8, MAPK9, MMP14, MMP2, NRAS, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLCB1, PLCB2, PLCB3, PLCB4, PLD1, PLD2, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCD, PRKX, PRKY, PTK2B, RAF1, SOS1, SOS2, SRC 95 ADCY1(10), ADCY2(17), ADCY3(7), ADCY4(4), ADCY5(1), ADCY6(2), ADCY7(7), ADCY8(18), ADCY9(3), ATF4(2), CACNA1C(15), CACNA1D(6), CACNA1F(10), CACNA1S(6), CALM2(1), CALML6(1), CAMK2A(1), CAMK2B(2), CAMK2D(1), CDC42(1), CGA(2), EGFR(7), FSHB(2), GNA11(1), GNAS(6), HBEGF(1), HRAS(4), ITPR1(6), ITPR2(13), ITPR3(4), JUN(3), KRAS(2), LHB(1), MAP2K1(2), MAP2K2(1), MAP2K3(3), MAP2K4(1), MAP2K6(2), MAP2K7(1), MAP3K1(3), MAP3K3(1), MAP3K4(4), MAPK1(1), MAPK10(1), MAPK11(2), MAPK13(2), MAPK14(1), MAPK3(1), MAPK7(1), MAPK8(2), MAPK9(1), MMP14(2), MMP2(3), NRAS(1), PLA2G2A(1), PLA2G2E(2), PLA2G2F(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), PLD1(7), PLD2(2), PRKACB(3), PRKACG(1), PRKCA(5), PRKCD(2), PRKX(1), RAF1(1), SOS1(11), SOS2(7) 34250226 289 134 286 93 71 113 20 55 30 0 0.42 1.00 1.00 251 HSA02010_ABC_TRANSPORTERS_GENERAL Genes involved in ABC transporters - general ABCA1, ABCA10, ABCA12, ABCA13, ABCA2, ABCA3, ABCA4, ABCA5, ABCA6, ABCA7, ABCA8, ABCA9, ABCB1, ABCB10, ABCB11, ABCB4, ABCB5, ABCB6, ABCB7, ABCB8, ABCB9, ABCC1, ABCC10, ABCC11, ABCC12, ABCC2, ABCC3, ABCC4, ABCC5, ABCC6, ABCC8, ABCC9, ABCD1, ABCD2, ABCD3, ABCD4, ABCG1, ABCG2, ABCG4, ABCG5, ABCG8, CFTR, TAP1, TAP2 44 ABCA1(9), ABCA10(9), ABCA12(8), ABCA13(33), ABCA2(9), ABCA3(4), ABCA4(12), ABCA5(5), ABCA6(7), ABCA7(4), ABCA8(6), ABCA9(12), ABCB1(17), ABCB10(5), ABCB11(6), ABCB4(7), ABCB5(14), ABCB6(3), ABCB7(2), ABCB8(1), ABCB9(3), ABCC1(5), ABCC10(9), ABCC11(6), ABCC12(15), ABCC2(6), ABCC3(3), ABCC4(1), ABCC5(8), ABCC6(1), ABCC8(6), ABCC9(10), ABCD1(3), ABCD2(12), ABCD4(1), ABCG1(1), ABCG2(2), ABCG4(4), ABCG5(2), ABCG8(6), CFTR(8), TAP1(3), TAP2(1) 31844200 289 130 287 99 81 91 18 68 30 1 0.54 1.00 1.00 252 HSA04110_CELL_CYCLE Genes involved in cell cycle ABL1, ANAPC1, ANAPC10, ANAPC11, ANAPC2, ANAPC4, ANAPC5, ANAPC7, ATM, ATR, BUB1, BUB1B, BUB3, CCNA1, CCNA2, CCNB1, CCNB2, CCNB3, CCND1, CCND2, CCND3, CCNE1, CCNE2, CCNH, CDC14A, CDC14B, CDC16, CDC2, CDC20, CDC23, CDC25A, CDC25B, CDC25C, CDC26, CDC27, CDC45L, CDC6, CDC7, CDK2, CDK4, CDK6, CDK7, CDKN1A, CDKN1B, CDKN1C, CDKN2A, CDKN2B, CDKN2C, CDKN2D, CHEK1, CHEK2, CREBBP, CUL1, DBF4, E2F1, E2F2, E2F3, EP300, ESPL1, FZR1, GADD45A, GADD45B, GADD45G, GSK3B, hCG_1982709, HDAC1, HDAC2, LOC440917, LOC728919, MAD1L1, MAD2L1, MAD2L2, MCM2, MCM3, MCM4, MCM5, MCM6, MCM7, MDM2, ORC1L, ORC2L, ORC3L, ORC4L, ORC5L, ORC6L, PCNA, PKMYT1, PLK1, PRKDC, PTTG1, PTTG2, RB1, RBL1, RBL2, RBX1, SFN, SKP1, SKP2, SMAD2, SMAD3, SMAD4, SMC1A, SMC1B, TFDP1, TGFB1, TGFB2, TGFB3, TP53, WEE1, YWHAB, YWHAE, YWHAG, YWHAH, YWHAQ, YWHAZ 106 ABL1(3), ANAPC1(6), ANAPC4(3), ANAPC5(5), ATM(8), ATR(13), BUB1(4), BUB1B(6), BUB3(2), CCNA1(1), CCNA2(1), CCNB1(2), CCNB2(1), CCNB3(11), CCND1(1), CCND2(3), CCND3(1), CCNE1(3), CCNE2(2), CDC14A(1), CDC14B(2), CDC16(1), CDC20(1), CDC23(1), CDC25B(2), CDC25C(1), CDC27(3), CDC6(6), CDC7(3), CDK7(1), CDKN1A(2), CDKN2B(1), CDKN2C(1), CHEK1(5), CHEK2(3), CREBBP(17), CUL1(4), DBF4(4), E2F1(2), EP300(9), ESPL1(5), GADD45A(1), GADD45B(1), GADD45G(1), HDAC1(2), MAD1L1(6), MAD2L1(2), MCM2(1), MCM3(1), MCM4(5), MCM5(6), MCM6(3), MCM7(3), MDM2(2), ORC1L(3), ORC2L(1), ORC3L(2), ORC5L(3), PKMYT1(1), PLK1(2), PRKDC(12), PTTG1(2), PTTG2(2), RBL1(5), RBL2(7), RBX1(1), SFN(2), SKP1(1), SKP2(2), SMAD2(2), SMAD3(1), SMAD4(5), SMC1A(2), SMC1B(9), TFDP1(3), TGFB1(1), TGFB2(3), WEE1(4), YWHAB(1), YWHAQ(1) 35836918 263 130 262 62 91 79 17 42 34 0 0.10 1.00 1.00 253 HSA04730_LONG_TERM_DEPRESSION Genes involved in long-term depression ARAF, BRAF, C7orf16, CACNA1A, CRH, CRHR1, GNA11, GNA12, GNA13, GNAI1, GNAI2, GNAI3, GNAO1, GNAQ, GNAS, GNAZ, GRIA1, GRIA2, GRIA3, GRID2, GRM1, GRM5, GUCY1A2, GUCY1A3, GUCY1B3, GUCY2C, GUCY2D, GUCY2F, HRAS, IGF1, IGF1R, ITPR1, ITPR2, ITPR3, KRAS, LYN, MAP2K1, MAP2K2, MAPK1, MAPK3, NOS1, NOS2A, NOS3, NPR1, NPR2, NRAS, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLCB1, PLCB2, PLCB3, PLCB4, PPP2CA, PPP2CB, PPP2R1A, PPP2R1B, PPP2R2A, PPP2R2B, PPP2R2C, PRKCA, PRKCB1, PRKCG, PRKG1, PRKG2, RAF1, RYR1 73 ARAF(3), BRAF(8), C7orf16(2), CACNA1A(10), CRHR1(3), GNA11(1), GNA12(2), GNA13(1), GNAI1(3), GNAI3(1), GNAS(6), GNAZ(3), GRIA1(9), GRIA2(7), GRIA3(11), GRID2(15), GRM1(12), GRM5(12), GUCY1A3(7), GUCY1B3(4), GUCY2C(5), GUCY2D(2), GUCY2F(6), HRAS(4), IGF1(3), IGF1R(1), ITPR1(6), ITPR2(13), ITPR3(4), KRAS(2), LYN(2), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK3(1), NOS1(11), NOS3(2), NPR1(3), NPR2(4), NRAS(1), PLA2G2A(1), PLA2G2E(2), PLA2G2F(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), PPP2R1A(8), PPP2R1B(2), PPP2R2A(1), PPP2R2B(1), PPP2R2C(2), PRKCA(5), PRKCG(9), PRKG1(6), PRKG2(4), RAF1(1), RYR1(27) 29285806 306 128 305 89 78 111 28 47 42 0 0.13 1.00 1.00 254 HSA04520_ADHERENS_JUNCTION Genes involved in adherens junction ACP1, ACTB, ACTG1, ACTN1, ACTN2, ACTN3, ACTN4, ACVR1B, ACVR1C, BAIAP2, CDC42, CDH1, CREBBP, CSNK2A1, CSNK2A2, CSNK2B, CTNNA1, CTNNA2, CTNNA3, CTNNB1, CTNND1, EGFR, EP300, ERBB2, FARP2, FER, FGFR1, FYN, IGF1R, INSR, IQGAP1, LEF1, LMO7, MAP3K7, MAPK1, MAPK3, MET, MLLT4, NLK, PARD3, PTPN1, PTPN6, PTPRB, PTPRF, PTPRJ, PTPRM, PVRL1, PVRL2, PVRL3, PVRL4, RAC1, RAC2, RAC3, RHOA, SMAD2, SMAD3, SMAD4, SNAI1, SNAI2, SORBS1, SRC, SSX2IP, TCF7, TCF7L1, TCF7L2, TGFBR1, TGFBR2, TJP1, VCL, WAS, WASF1, WASF2, WASF3, WASL, YES1 74 ACP1(2), ACTB(1), ACTG1(2), ACTN1(2), ACTN2(9), ACTN3(2), ACTN4(5), ACVR1B(3), ACVR1C(4), BAIAP2(2), CDC42(1), CDH1(3), CREBBP(17), CSNK2A1(3), CTNNA1(1), CTNNA2(27), CTNNA3(16), CTNNB1(4), CTNND1(4), EGFR(7), EP300(9), ERBB2(2), FARP2(7), FER(3), FGFR1(1), FYN(5), IGF1R(1), INSR(9), IQGAP1(8), LEF1(3), LMO7(7), MAP3K7(2), MAPK1(1), MAPK3(1), MET(4), MLLT4(4), NLK(2), PARD3(8), PTPN1(1), PTPRB(17), PTPRF(6), PTPRJ(4), PTPRM(6), PVRL1(3), PVRL3(3), PVRL4(6), RAC1(1), SMAD2(2), SMAD3(1), SMAD4(5), SNAI2(3), SORBS1(5), SSX2IP(2), TCF7(1), TCF7L2(1), TGFBR2(3), TJP1(9), VCL(2), WAS(4), WASF1(1), WASF3(1), WASL(2), YES1(1) 31921986 282 126 280 89 78 90 19 60 35 0 0.68 1.00 1.00 255 HSA04670_LEUKOCYTE_TRANSENDOTHELIAL_MIGRATION Genes involved in Leukocyte transendothelial migration ACTN1, ACTN2, ACTN3, ACTN4, ARHGAP5, BCAR1, CD99, CDC42, CDH5, CLDN1, CLDN10, CLDN11, CLDN14, CLDN15, CLDN16, CLDN17, CLDN18, CLDN19, CLDN2, CLDN20, CLDN22, CLDN23, CLDN3, CLDN4, CLDN5, CLDN6, CLDN7, CLDN8, CLDN9, CTNNA1, CTNNA2, CTNNA3, CTNNB1, CTNND1, CXCL12, CXCR4, CYBA, CYBB, ESAM, EZR, F11R, GNAI1, GNAI2, GNAI3, GRLF1, ICAM1, ITGA4, ITGAL, ITGAM, ITGB1, ITGB2, ITK, JAM2, JAM3, MAPK11, MAPK12, MAPK13, MAPK14, MLLT4, MMP2, MMP9, MRCL3, MRLC2, MSN, MYL2, MYL5, MYL7, MYL8P, MYL9, MYLC2PL, MYLPF, NCF1, NCF2, NCF4, NOX1, NOX3, OCLN, PECAM1, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLCG1, PLCG2, PRKCA, PRKCB1, PRKCG, PTK2, PTK2B, PTPN11, PXN, RAC1, RAC2, RAP1A, RAP1B, RAPGEF3, RAPGEF4, RASSF5, RHOA, RHOH, ROCK1, ROCK2, SIPA1, THY1, TXK, VASP, VAV1, VAV2, VAV3, VCAM1, VCL 108 ACTN1(2), ACTN2(9), ACTN3(2), ACTN4(5), ARHGAP5(2), BCAR1(6), CD99(2), CDC42(1), CDH5(2), CLDN1(2), CLDN10(4), CLDN11(1), CLDN15(1), CLDN16(4), CLDN17(1), CLDN18(1), CLDN19(1), CLDN2(1), CLDN22(1), CLDN3(1), CLDN4(1), CLDN5(1), CLDN6(2), CLDN8(1), CLDN9(3), CTNNA1(1), CTNNA2(27), CTNNA3(16), CTNNB1(4), CTNND1(4), CXCR4(5), CYBB(6), ESAM(4), F11R(1), GNAI1(3), GNAI3(1), GRLF1(13), ICAM1(2), ITGA4(4), ITGAL(1), ITGAM(7), ITGB1(5), ITGB2(5), ITK(2), JAM2(2), MAPK11(2), MAPK13(2), MAPK14(1), MLLT4(4), MMP2(3), MMP9(6), MSN(4), MYL2(2), MYL9(1), MYLPF(1), NCF2(3), NCF4(1), NOX1(2), NOX3(6), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PLCG1(3), PLCG2(4), PRKCA(5), PRKCG(9), PTK2(6), PTPN11(3), PXN(3), RAC1(1), RAP1A(1), RAP1B(1), RAPGEF3(1), RAPGEF4(6), RASSF5(1), RHOH(4), ROCK1(5), ROCK2(3), THY1(2), TXK(3), VASP(2), VAV1(7), VAV2(4), VAV3(1), VCAM1(5), VCL(2) 32726190 325 125 325 104 93 127 21 52 32 0 0.46 1.00 1.00 256 HSA04610_COMPLEMENT_AND_COAGULATION_CASCADES Genes involved in complement and coagulation cascades A2M, BDKRB1, BDKRB2, C1QA, C1QB, C1QC, C1R, C1S, C2, C3, C3AR1, C4A, C4B, C4BPA, C4BPB, C5, C5AR1, C6, C7, C8A, C8B, C8G, C9, CD46, CD55, CD59, CFB, CFD, CFH, CFI, CPB2, CR1, CR2, F10, F11, F12, F13A1, F13B, F2, F2R, F3, F5, F7, F8, F9, FGA, FGB, FGG, KLKB1, KNG1, MASP1, MASP2, MBL2, PLAT, PLAU, PLAUR, PLG, PROC, PROS1, SERPINA1, SERPINA5, SERPINC1, SERPIND1, SERPINE1, SERPINF2, SERPING1, TFPI, THBD, VWF 67 A2M(8), BDKRB1(2), BDKRB2(3), C1QA(2), C1QB(2), C1R(3), C1S(3), C2(2), C3(5), C3AR1(2), C4BPA(2), C5(1), C5AR1(3), C6(18), C7(12), C8A(6), C8B(4), C9(3), CD46(2), CD55(1), CFB(2), CFH(7), CFI(3), CPB2(3), CR1(7), CR2(11), F10(3), F11(3), F12(1), F13A1(5), F13B(12), F2R(2), F3(1), F5(19), F7(2), F8(9), F9(7), FGA(5), FGB(4), FGG(2), KLKB1(7), KNG1(9), MASP1(10), MASP2(1), MBL2(4), PLAT(1), PLAU(2), PLAUR(2), PLG(2), PROS1(5), SERPINA1(1), SERPINA5(3), SERPINC1(7), SERPIND1(2), SERPINF2(3), SERPING1(3), VWF(17) 24322810 271 123 271 80 71 102 21 50 27 0 0.40 1.00 1.00 257 PURINE_METABOLISM 1_Sep, ADA, ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADK, ADSL, ADSS, AK1, AK2, AK5, ALLC, AMPD1, AMPD2, AMPD3, APRT, ATIC, ATP1B1, ATP5A1, ATP5B, ATP5C1, ATP5D, ATP5F1, ATP5G1, ATP5G2, ATP5G3, ATP5H, ATP5I, ATP5J, ATP5J2, CANT1, DCK, DGUOK, ECGF1, ENPP1, ENPP3, ENTPD1, ENTPD2, FHIT, GART, GDA, GMPS, GUCY1A2, GUCY1A3, GUCY1B2, GUCY1B3, GUCY2C, GUCY2D, GUCY2F, GUK1, HPRT1, IMPDH1, IMPDH2, ITPA, NME1, NME2, NP, NPR1, NPR2, NT5C, NT5E, NT5M, NUDT2, PAICS, PAPSS1, PAPSS2, PDE1A, PDE4A, PDE4B, PDE4C, PDE4D, PDE5A, PDE6B, PDE6C, PDE6G, PDE7B, PDE8A, PDE9A, PFAS, PKLR, PKM2, POLA, POLB, POLD1, POLD2, POLE, POLG, POLL, POLQ, POLR1B, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLRMT, POLS, PPAT, PRPS1, PRPS1L1, PRPS2, PRUNE, RRM1, RRM2, SAC 109 ADCY1(10), ADCY2(17), ADCY3(7), ADCY4(4), ADCY5(1), ADCY6(2), ADCY7(7), ADCY8(18), ADSL(1), ADSS(1), AK2(1), AK5(7), ALLC(3), AMPD1(4), AMPD2(1), AMPD3(7), ATIC(1), ATP5A1(3), ATP5B(2), ATP5C1(3), ATP5G2(2), ATP5G3(1), CANT1(1), DCK(1), ENPP1(8), ENPP3(6), ENTPD1(1), ENTPD2(2), GART(3), GDA(7), GUCY1A3(7), GUCY1B3(4), GUCY2C(5), GUCY2D(2), GUCY2F(6), GUK1(2), HPRT1(1), IMPDH1(2), IMPDH2(1), NPR1(3), NPR2(4), NT5E(2), PAPSS2(1), PDE1A(2), PDE4A(1), PDE4B(3), PDE4C(4), PDE4D(2), PDE5A(4), PDE6B(3), PDE6C(1), PDE7B(1), PDE8A(5), PDE9A(2), PFAS(6), PKLR(4), PKM2(3), POLB(1), POLD1(2), POLD2(1), POLE(7), POLG(2), POLL(2), POLQ(18), POLR1B(2), POLR2A(2), POLR2B(6), POLR2D(1), POLR2E(2), POLRMT(2), PPAT(2), PRPS1(2), PRPS1L1(3), PRPS2(1), RRM1(1), RRM2(1) 34067064 271 123 271 86 73 101 16 48 33 0 0.39 1.00 1.00 258 PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM ACVR1, ACVR1B, ACVRL1, AKT1, AURKB, BMPR1A, BMPR2, BUB1, CDC2L5, CDIPT, CDKL1, CDKL2, CDS1, CDS2, CLK1, CLK2, CLK4, COL4A3BP, CSNK2A1, CSNK2A1, CSNK2A1P, CSNK2A2, CSNK2B, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKQ, DGKZ, IMPA1, INPP1, INPP4A, INPP4B, INPP5A, INPPL1, ITPKA, ITPKB, MAP3K10, MOS, NEK1, NEK3, OCRL, PAK4, PCTK1, PCTK2, PIK3C2A, PIK3C2B, PIK3C2G, PIK3CA, PIK3CB, PIK3CG, PIK4CA, PIK4CA, LOC220686, PIM2, PIP5K2B, PLCB1, PLCB2, PLCB3, PLCB4, PLCD1, PLCG1, PLCG2, PLK3, PRKACA, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCQ, PRKCZ, PRKD1, PRKG1, RAF1, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA4, RPS6KB1, STK11, TGFBR1, VRK1 81 ACVR1B(3), ACVRL1(3), AKT1(1), BMPR1A(3), BMPR2(1), BUB1(4), CDKL1(1), CDKL2(2), CDS1(2), CLK1(3), CLK2(2), CLK4(2), COL4A3BP(3), CSNK2A1(3), DGKA(3), DGKB(5), DGKD(6), DGKE(4), DGKG(2), DGKQ(1), DGKZ(4), IMPA1(2), INPP1(1), INPP4A(5), INPP4B(6), INPP5A(4), INPPL1(4), ITPKA(1), ITPKB(6), MOS(4), NEK1(3), OCRL(8), PAK4(1), PIK3C2A(6), PIK3C2B(6), PIK3C2G(8), PIK3CB(4), PIK3CG(17), PIM2(2), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), PLCD1(1), PLCG1(3), PLCG2(4), PLK3(3), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PRKCA(5), PRKCD(2), PRKCE(3), PRKCG(9), PRKCQ(4), PRKCZ(1), PRKD1(11), PRKG1(6), RAF1(1), RPS6KA1(2), RPS6KA2(6), RPS6KA3(1), RPS6KA4(1), RPS6KB1(1), STK11(3), VRK1(1) 29827994 248 122 247 70 72 84 19 41 32 0 0.30 1.00 1.00 259 HISTONE_METHYLTRANSFERASE Genes with HMT activity AOF2, KDM6A, ASH1L, ASH2L, C17orf79, CARM1, CTCFL, DOT1L, EED, EHMT1, EHMT2, EZH1, EZH2, FBXL10, FBXL11, FBXO11, HCFC1, HSF4, JMJD1A, JMJD1B, JMJD2A, JMJD2B, JMJD2C, JMJD2D, JMJD3, JMJD4, JMJD6, MEN1, MLL, MLL2, MLL3, MLL4, MLL5, NSD1, OGT, PAXIP1, PPP1CA, PPP1CB, PPP1CC, PRDM2, PRDM6, PRDM7, PRDM9, PRMT1, PRMT5, PRMT6, PRMT7, PRMT8, RBBP5, SATB1, SETD1A, SETD1B, SETD2, SETD7, SETD8, SETDB1, SETDB2, SETMAR, SMYD3, STK38, SUV39H1, SUV39H2, SUV420H1, SUV420H2, SUZ12, WHSC1, WHSC1L1 55 ASH1L(9), ASH2L(4), CARM1(1), CTCFL(2), DOT1L(5), EED(2), EHMT1(5), EHMT2(1), EZH1(4), EZH2(4), FBXO11(6), HCFC1(1), HSF4(1), JMJD6(1), KDM6A(7), MEN1(3), MLL(5), MLL2(41), MLL3(30), MLL4(10), MLL5(4), NSD1(10), OGT(2), PRDM2(6), PRDM7(1), PRDM9(14), PRMT5(2), PRMT6(2), PRMT7(6), PRMT8(3), RBBP5(1), SATB1(4), SETD1A(8), SETD2(5), SETD8(1), SETDB1(3), SMYD3(1), STK38(4), SUV39H1(2), SUV39H2(2), SUV420H1(6), SUZ12(4), WHSC1(1), WHSC1L1(16) 31772644 250 121 249 58 69 75 11 36 58 1 0.11 1.00 1.00 260 HSA01030_GLYCAN_STRUCTURES_BIOSYNTHESIS_1 Genes involved in glycan structures - biosynthesis 1 A4GNT, ALG1, ALG10, ALG10B, ALG11, ALG12, ALG13, ALG14, ALG2, ALG3, ALG6, ALG8, ALG9, B3GALT6, B3GNT1, B3GNT2, B3GNT6, B3GNT7, B4GALT1, B4GALT2, B4GALT3, B4GALT4, B4GALT5, B4GALT7, C1GALT1, C1GALT1C1, ChGn, CHPF, CHST1, CHST11, CHST12, CHST13, CHST14, CHST2, CHST3, CHST4, CHST6, CHST7, CHSY-2, CHSY1, CSGlcA-T, DAD1, DDOST, DPAGT1, EXT1, EXT2, EXTL1, EXTL2, EXTL3, FUT11, FUT8, GALNAC4S-6ST, GALNACT-2, GALNT1, GALNT10, GALNT11, GALNT12, GALNT13, GALNT14, GALNT17, GALNT2, GALNT3, GALNT4, GALNT5, GALNT6, GALNT7, GALNT8, GALNT9, GALNTL1, GALNTL2, GALNTL4, GALNTL5, GANAB, GCNT1, GCNT3, GCNT4, GCS1, HS2ST1, HS3ST1, HS3ST2, HS3ST3A1, HS3ST3B1, HS3ST5, HS6ST1, HS6ST2, HS6ST3, LOC728969, MAN1A1, MAN1A2, MAN1B1, MAN1C1, MAN2A1, MGAT1, MGAT2, MGAT3, MGAT4A, MGAT4B, MGAT5, MGAT5B, NDST1, NDST2, NDST3, NDST4, OGT, RPN1, RPN2, ST3GAL1, ST3GAL2, ST3GAL3, ST3GAL4, ST6GAL1, ST6GALNAC1, STT3B, UST, WBSCR17, XYLT1, XYLT2 106 A4GNT(6), ALG1(1), ALG10B(1), ALG12(1), ALG13(8), ALG2(3), ALG6(2), ALG8(1), ALG9(1), B3GNT2(1), B3GNT6(1), B3GNT7(1), B4GALT1(1), B4GALT3(3), B4GALT4(3), B4GALT5(2), C1GALT1C1(1), CHPF(2), CHST1(2), CHST11(2), CHST12(1), CHST2(4), CHST3(2), CHST4(2), CHST6(5), CHSY1(2), DDOST(1), EXT1(2), EXT2(1), EXTL1(3), EXTL2(1), EXTL3(1), FUT8(2), GALNT1(2), GALNT10(2), GALNT11(2), GALNT12(3), GALNT13(13), GALNT14(5), GALNT2(2), GALNT3(3), GALNT5(7), GALNT6(2), GALNT8(3), GALNT9(1), GALNTL1(4), GALNTL4(4), GALNTL5(3), GANAB(5), GCNT1(3), GCNT3(2), HS3ST2(2), HS3ST3A1(1), HS3ST5(4), HS6ST3(3), MAN1A1(4), MAN1A2(5), MAN1C1(3), MAN2A1(4), MGAT1(2), MGAT2(2), MGAT3(4), MGAT4A(2), MGAT4B(1), MGAT5(5), MGAT5B(4), NDST1(4), NDST2(2), NDST3(4), NDST4(13), OGT(2), RPN1(1), ST3GAL1(4), ST3GAL4(2), ST6GAL1(2), ST6GALNAC1(3), STT3B(1), UST(1), WBSCR17(11), XYLT1(5) 29268184 237 121 235 83 65 94 18 39 21 0 0.66 1.00 1.00 261 HSA04650_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY Genes involved in natural killer cell mediated cytotoxicity ARAF, BID, BRAF, CASP3, CD244, CD247, CD48, CHP, CSF2, FAS, FASLG, FCER1G, FCGR3A, FCGR3B, FYN, GRB2, GZMB, HCST, HLA-A, HLA-B, HLA-C, HLA-E, HLA-G, HRAS, ICAM1, ICAM2, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, IFNAR1, IFNAR2, IFNB1, IFNG, IFNGR1, IFNGR2, ITGAL, ITGB2, KIR2DL1, KIR2DL2, KIR2DL3, KIR2DL4, KIR2DL5A, KIR2DS1, KIR2DS2, KIR3DL1, KIR3DL2, KLRC1, KLRC2, KLRC3, KLRD1, KLRK1, KRAS, LAT, LCK, LCP2, LOC652578, MAP2K1, MAP2K2, MAPK1, MAPK3, MICA, MICB, NCR1, NCR2, NCR3, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NRAS, PAK1, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLCG1, PLCG2, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRF1, PRKCA, PRKCB1, PRKCG, PTK2B, PTPN11, PTPN6, RAC1, RAC2, RAC3, RAF1, SH2D1A, SH2D1B, SH3BP2, SHC1, SHC2, SHC3, SHC4, SOS1, SOS2, SYK, TNF, TNFRSF10A, TNFRSF10B, TNFRSF10C, TNFRSF10D, TNFSF10, TYROBP, ULBP1, ULBP2, ULBP3, VAV1, VAV2, VAV3, ZAP70 123 ARAF(3), BRAF(8), CD244(3), CHP(2), FAS(1), FASLG(1), FCER1G(1), FCGR3A(4), FCGR3B(2), FYN(5), GZMB(1), HLA-B(1), HLA-C(1), HLA-G(2), HRAS(4), ICAM1(2), IFNA1(1), IFNA14(2), IFNA16(2), IFNA17(1), IFNA4(1), IFNA6(1), IFNA7(1), IFNA8(2), IFNAR1(2), IFNB1(2), IFNG(1), IFNGR1(4), IFNGR2(1), ITGAL(1), ITGB2(5), KIR2DL1(2), KIR2DL3(4), KIR2DL4(1), KIR3DL1(6), KIR3DL2(1), KLRC1(1), KLRC3(2), KLRD1(1), KRAS(2), LCK(3), LCP2(2), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK3(1), NCR1(5), NCR2(1), NFAT5(3), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), NRAS(1), PAK1(2), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PLCG1(3), PLCG2(4), PPP3CA(4), PPP3CB(4), PPP3CC(2), PPP3R1(1), PPP3R2(4), PRF1(2), PRKCA(5), PRKCG(9), PTPN11(3), RAC1(1), RAF1(1), SH2D1A(2), SHC1(2), SHC2(4), SHC3(2), SHC4(5), SOS1(11), SOS2(7), SYK(1), TNF(1), TNFRSF10A(1), TNFRSF10B(1), TYROBP(3), ULBP1(2), ULBP3(1), VAV1(7), VAV2(4), VAV3(1), ZAP70(4) 29700546 262 121 262 79 81 100 16 35 30 0 0.29 1.00 1.00 262 INTEGRIN_MEDIATED_CELL_ADHESION_KEGG AKT1, AKT3, BCAR1, CAPN1, CAPN10, CAPN11, CAPN2, CAPN3, CAPN5, CAPN6, CAPN7, CAPN9, CAPNS1, CAV1, CAV2, CAV3, CDC42, CRK, CSK, DKFZp434E1119, DOCK1, FLJ14825, FLJ40125, FYN, GIT2, GRB2, ILK, ITGA10, ITGA11, ITGA2, ITGA2B, ITGA3, ITGA4, ITGA5, ITGA6, ITGA7, ITGA8, ITGA9, ITGAD, ITGAE, ITGAL, ITGAM, ITGAV, ITGAX, ITGB1, ITGB2, ITGB3, ITGB4, ITGB5, ITGB6, ITGB7, ITGB8, LOC283874, PDPK1, MAP2K1, MAP2K2, MAP2K3, MAP2K6, MAPK10, MAPK12, MAPK4, MAPK6, MAPK7, MGC17301, MYLK2, PAK1, PAK2, PAK3, PAK4, PAK6, PDPK1, PIK3R2, PTK2, PXN, RAC1, RAC2, RAC3, RAP1B, RAPGEF1, RHO, ROCK1, ROCK2, SDCCAG8, SEPP1, SHC1, SHC3, SORBS1, SOS1, SRC, TLN1, TNS, TNS1, VASP, VAV2, VAV3, VCL, ZYX 90 AKT1(1), AKT3(3), BCAR1(6), CAPN1(2), CAPN10(5), CAPN11(2), CAPN2(2), CAPN3(8), CAPN5(2), CAPN6(6), CAPN7(1), CAPN9(1), CAV2(1), CAV3(1), CDC42(1), DOCK1(4), FYN(5), ILK(1), ITGA10(8), ITGA11(6), ITGA2(5), ITGA2B(2), ITGA3(1), ITGA4(4), ITGA5(2), ITGA6(7), ITGA7(4), ITGA8(13), ITGA9(2), ITGAD(8), ITGAE(4), ITGAL(1), ITGAM(7), ITGAV(4), ITGAX(9), ITGB1(5), ITGB2(5), ITGB3(4), ITGB4(8), ITGB6(1), ITGB7(1), ITGB8(4), MAP2K1(2), MAP2K2(1), MAP2K3(3), MAP2K6(2), MAPK10(1), MAPK4(2), MAPK6(4), MAPK7(1), MYLK2(3), PAK1(2), PAK2(1), PAK3(1), PAK4(1), PDPK1(1), PIK3R2(4), PTK2(6), PXN(3), RAC1(1), RAP1B(1), RAPGEF1(4), RHO(1), ROCK1(5), ROCK2(3), SDCCAG8(6), SHC1(2), SHC3(2), SORBS1(5), SOS1(11), TLN1(6), TNS1(6), VASP(2), VAV2(4), VAV3(1), VCL(2), ZYX(1) 36000144 268 121 267 95 75 102 20 46 25 0 0.76 1.00 1.00 263 G_PROTEIN_SIGNALING ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, AKAP1, AKAP10, AKAP11, AKAP12, AKAP2, PALM2_AKAP2, AKAP3, AKAP4, AKAP5, AKAP6, AKAP7, AKAP8, AKAP9, ARHGEF1, CALM1, CALM2, CALM3, CHMP1B, GNA11, GNA12, GNA13, GNA14, GNA15, GNAI2, GNAI3, GNAL, GNAO1, GNAQ, GNAZ, GNB1, GNB2, GNB3, GNB5, GNG10, GNG10, LOC552891, GNG12, GNG13, GNG3, GNG4, GNG5, GNG7, GNGT1, GNGT2, HRAS, IL18BP, ITPR1, KCNJ3, KRAS, MGC11266, NRAS, PALM2, PALM2_AKAP2, PALM2_AKAP2, PDE1A, PDE1B, PDE1C, PDE4A, PDE4B, PDE4C, PDE4D, PDE7A, PDE7B, PDE8A, PDE8B, PLCB3, PPP3CA, PPP3CC, PRKACA, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCI, PRKCQ, PRKCZ, PRKD1, PRKD3, RHOA, RRAS, SARA1, SLC9A1, USP5 91 ADCY1(10), ADCY2(17), ADCY3(7), ADCY4(4), ADCY5(1), ADCY6(2), ADCY7(7), ADCY8(18), ADCY9(3), AKAP1(2), AKAP11(7), AKAP12(4), AKAP3(8), AKAP4(6), AKAP5(1), AKAP6(15), AKAP7(2), AKAP8(5), AKAP9(11), ARHGEF1(2), CALM2(1), CHMP1B(1), GNA11(1), GNA12(2), GNA13(1), GNA14(3), GNA15(1), GNAI3(1), GNAL(1), GNAZ(3), GNB1(1), GNB2(2), GNB3(2), GNB5(1), GNG12(1), GNG4(2), GNG5(1), HRAS(4), ITPR1(6), KRAS(2), NRAS(1), PDE1A(2), PDE1B(3), PDE1C(12), PDE4A(1), PDE4B(3), PDE4C(4), PDE4D(2), PDE7A(1), PDE7B(1), PDE8A(5), PDE8B(3), PLCB3(4), PPP3CA(4), PPP3CC(2), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PRKCA(5), PRKCD(2), PRKCE(3), PRKCG(9), PRKCI(5), PRKCQ(4), PRKCZ(1), PRKD1(11), PRKD3(2), SLC9A1(3), USP5(2) 31146084 274 120 273 62 81 95 18 47 33 0 0.0076 1.00 1.00 264 HSA04350_TGF_BETA_SIGNALING_PATHWAY Genes involved in TGF-beta signaling pathway ACVR1, ACVR1B, ACVR1C, ACVR2A, ACVR2B, ACVRL1, AMH, AMHR2, BMP2, BMP4, BMP5, BMP6, BMP7, BMP8A, BMP8B, BMPR1A, BMPR1B, BMPR2, CDKN2B, CHRD, COMP, CREBBP, CUL1, DCN, E2F4, E2F5, EP300, FST, GDF5, GDF6, GDF7, hCG_1982709, ID1, ID2, ID3, ID4, IFNG, INHBA, INHBB, INHBC, INHBE, LEFTY1, LEFTY2, LTBP1, MAPK1, MAPK3, MYC, NODAL, NOG, PITX2, PPP2CA, PPP2CB, PPP2R1A, PPP2R1B, PPP2R2A, PPP2R2B, PPP2R2C, RBL1, RBL2, RBX1, RHOA, ROCK1, ROCK2, RPS6KB1, RPS6KB2, SKP1, SMAD1, SMAD2, SMAD3, SMAD4, SMAD5, SMAD6, SMAD7, SMAD9, SMURF1, SMURF2, SP1, TFDP1, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, THBS1, THBS2, THBS3, THBS4, TNF, ZFYVE16, ZFYVE9 88 ACVR1B(3), ACVR1C(4), ACVR2A(4), ACVRL1(3), AMHR2(7), BMP4(1), BMP5(8), BMPR1A(3), BMPR1B(1), BMPR2(1), CDKN2B(1), CHRD(6), COMP(1), CREBBP(17), CUL1(4), DCN(1), E2F5(2), EP300(9), GDF5(4), GDF6(2), ID2(1), IFNG(1), INHBA(5), INHBB(1), INHBC(1), LEFTY2(3), LTBP1(16), MAPK1(1), MAPK3(1), MYC(1), NODAL(3), PITX2(3), PPP2R1A(8), PPP2R1B(2), PPP2R2A(1), PPP2R2B(1), PPP2R2C(2), RBL1(5), RBL2(7), RBX1(1), ROCK1(5), ROCK2(3), RPS6KB1(1), RPS6KB2(1), SKP1(1), SMAD1(3), SMAD2(2), SMAD3(1), SMAD4(5), SMAD7(2), SMAD9(1), SMURF1(2), SP1(2), TFDP1(3), TGFB1(1), TGFB2(3), TGFBR2(3), THBS1(1), THBS2(16), THBS3(3), THBS4(1), TNF(1), ZFYVE16(3), ZFYVE9(6) 26550302 216 118 214 64 62 75 14 37 28 0 0.46 1.00 1.00 265 HSA04070_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM Genes involved in phosphatidylinositol signaling system CALM1, CALM2, CALM3, CALML3, CALML6, CARKL, CDIPT, CDS1, CDS2, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKI, DGKQ, DGKZ, FN3K, IMPA1, IMPA2, INPP1, INPP4A, INPP4B, INPP5A, INPP5B, INPP5D, INPP5E, INPPL1, ITGB1BP3, ITPK1, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, OCRL, PI4KA, PI4KB, PIB5PA, PIK3C2A, PIK3C2B, PIK3C2G, PIK3C3, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PIP4K2A, PIP4K2B, PIP4K2C, PIP5K1A, PIP5K1B, PIP5K1C, PIP5K3, PLCB1, PLCB2, PLCB3, PLCB4, PLCD1, PLCD3, PLCD4, PLCE1, PLCG1, PLCG2, PLCZ1, PRKCA, PRKCB1, PRKCG, PTEN, PTPMT1, SKIP, SYNJ1, SYNJ2 71 CALM2(1), CALML6(1), CDS1(2), DGKA(3), DGKB(5), DGKD(6), DGKE(4), DGKG(2), DGKI(13), DGKQ(1), DGKZ(4), FN3K(1), IMPA1(2), INPP1(1), INPP4A(5), INPP4B(6), INPP5A(4), INPP5B(7), INPP5D(8), INPP5E(2), INPPL1(4), ITPK1(3), ITPKA(1), ITPKB(6), ITPR1(6), ITPR2(13), ITPR3(4), OCRL(8), PI4KA(7), PI4KB(1), PIK3C2A(6), PIK3C2B(6), PIK3C2G(8), PIK3C3(5), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PIP4K2A(3), PIP4K2B(2), PIP4K2C(3), PIP5K1A(4), PIP5K1B(2), PIP5K1C(2), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), PLCD1(1), PLCD3(1), PLCE1(13), PLCG1(3), PLCG2(4), PLCZ1(5), PRKCA(5), PRKCG(9), SYNJ1(4), SYNJ2(3) 32886390 279 117 277 78 80 101 15 43 40 0 0.12 1.00 1.00 266 HSA04916_MELANOGENESIS Genes involved in melanogenesis ADCY1, ADCY2, ADCY3, ADCY4, ADCY5, ADCY6, ADCY7, ADCY8, ADCY9, ASIP, CALM1, CALM2, CALM3, CALML3, CALML6, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CREB1, CREB3, CREB3L1, CREB3L2, CREB3L3, CREB3L4, CREBBP, CTNNB1, DCT, DVL1, DVL2, DVL3, EDN1, EDNRB, EP300, FZD1, FZD10, FZD2, FZD3, FZD4, FZD5, FZD6, FZD7, FZD8, FZD9, GNAI1, GNAI2, GNAI3, GNAO1, GNAQ, GNAS, GSK3B, HRAS, KIT, KITLG, KRAS, LEF1, LOC652788, MAP2K1, MAP2K2, MAPK1, MAPK3, MC1R, MITF, NRAS, PLCB1, PLCB2, PLCB3, PLCB4, POMC, PRKACA, PRKACB, PRKACG, PRKCA, PRKCB1, PRKCG, PRKX, PRKY, RAF1, TCF7, TCF7L1, TCF7L2, TYR, TYRP1, WNT1, WNT10A, WNT10B, WNT11, WNT16, WNT2, WNT2B, WNT3, WNT3A, WNT4, WNT5A, WNT5B, WNT6, WNT7A, WNT7B, WNT8A, WNT8B, WNT9A, WNT9B 99 ADCY1(10), ADCY2(17), ADCY3(7), ADCY4(4), ADCY5(1), ADCY6(2), ADCY7(7), ADCY8(18), ADCY9(3), CALM2(1), CALML6(1), CAMK2A(1), CAMK2B(2), CAMK2D(1), CREB1(1), CREB3(2), CREB3L2(2), CREB3L3(1), CREB3L4(2), CREBBP(17), CTNNB1(4), DCT(4), DVL1(3), DVL3(2), EDNRB(5), EP300(9), FZD1(1), FZD10(2), FZD2(1), FZD3(5), FZD4(1), FZD6(3), FZD7(2), FZD8(1), FZD9(2), GNAI1(3), GNAI3(1), GNAS(6), HRAS(4), KIT(7), KRAS(2), LEF1(3), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK3(1), NRAS(1), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), POMC(1), PRKACB(3), PRKACG(1), PRKCA(5), PRKCG(9), PRKX(1), RAF1(1), TCF7(1), TCF7L2(1), TYR(10), TYRP1(2), WNT1(1), WNT10A(1), WNT10B(4), WNT11(1), WNT2(3), WNT2B(3), WNT3(2), WNT3A(2), WNT5A(1), WNT6(2), WNT7A(3), WNT7B(1), WNT8A(2), WNT9A(1), WNT9B(1) 29134506 264 117 263 81 55 106 25 53 25 0 0.26 1.00 1.00 267 HSA00500_STARCH_AND_SUCROSE_METABOLISM Genes involved in starch and sucrose metabolism AGL, AMY1A, AMY1B, AMY1C, AMY2A, AMY2B, ASCC3, ASCC3L1, ATP13A2, DDX18, DDX19A, DDX23, DDX4, DDX41, DDX47, DDX50, DDX51, DDX52, DDX54, DDX55, DDX56, DHX58, ENPP1, ENPP3, ENTPD7, EP400, ERCC2, ERCC3, G6PC, G6PC2, GAA, GANC, GBA, GBA3, GBE1, GCK, GPI, GUSB, GYS1, GYS2, HK1, HK2, HK3, IFIH1, LYZL1, MGAM, MOV10L1, NUDT5, NUDT8, PGM1, PGM3, PYGB, PYGL, PYGM, RAD54B, RAD54L, RUVBL2, SETX, SI, SKIV2L2, SMARCA2, SMARCA5, TREH, UGDH, UGP2, UGT1A1, UGT1A10, UGT1A3, UGT1A4, UGT1A5, UGT1A6, UGT1A7, UGT1A8, UGT1A9, UGT2A1, UGT2A3, UGT2B10, UGT2B11, UGT2B15, UGT2B17, UGT2B28, UGT2B4, UGT2B7, UXS1 76 AGL(6), AMY2B(7), ASCC3(10), ATP13A2(1), DDX18(2), DDX19A(1), DDX23(3), DDX4(2), DDX41(2), DDX50(1), DDX51(1), DDX52(1), DDX54(3), DDX55(1), DDX56(1), ENPP1(8), ENPP3(6), ENTPD7(2), EP400(9), ERCC3(1), G6PC(3), G6PC2(3), GANC(5), GBA(4), GBE1(2), GCK(5), GPI(5), GUSB(2), GYS1(1), GYS2(4), HK1(3), HK2(5), HK3(5), IFIH1(4), MGAM(5), MOV10L1(7), NUDT8(1), PGM1(1), PYGB(4), PYGM(6), RAD54L(1), SETX(12), SKIV2L2(2), SMARCA2(4), TREH(1), UGDH(2), UGP2(4), UGT1A1(1), UGT1A10(2), UGT1A3(1), UGT1A4(1), UGT1A5(3), UGT1A6(1), UGT1A7(2), UGT1A8(4), UGT1A9(3), UGT2A1(3), UGT2A3(6), UGT2B10(3), UGT2B11(5), UGT2B15(3), UGT2B28(5), UGT2B4(8), UGT2B7(2) 31500126 222 111 222 74 53 81 21 41 26 0 0.76 1.00 1.00 268 ST_INTEGRIN_SIGNALING_PATHWAY Integrins are transmembrane receptors that mediate cell growth, survival, and migration by binding to ligands in the extracellular matrix. ABL1, ACK1, ACTN1, ACTR2, ACTR3, AKT1, AKT2, AKT3, ANGPTL2, ARHGEF6, ARHGEF7, BCAR1, BRAF, CAV1, CDC42, CDKN2A, CRK, CSE1L, DDEF1, DOCK1, EPHB2, FYN, GRAF, GRB2, GRB7, GRF2, GRLF1, ILK, ITGA1, ITGA10, ITGA11, ITGA2, ITGA3, ITGA4, ITGA5, ITGA6, ITGA7, ITGA8, ITGA9, ITGB3BP, MAP2K4, MAP2K7, MAP3K11, MAPK1, MAPK10, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, MRAS, MYLK, MYLK2, P4HB, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PIK3CA, PIK3CB, PKLR, PLCG1, PLCG2, PTEN, PTK2, RAF1, RALA, RHO, ROCK1, ROCK2, SHC1, SOS1, SOS2, SRC, TERF2IP, TLN1, TLN2, VASP, WAS, ZYX 75 ABL1(3), ACTN1(2), AKT1(1), AKT3(3), ARHGEF6(2), ARHGEF7(3), BCAR1(6), BRAF(8), CDC42(1), CSE1L(5), DOCK1(4), EPHB2(5), FYN(5), GRLF1(13), ILK(1), ITGA1(4), ITGA10(8), ITGA11(6), ITGA2(5), ITGA3(1), ITGA4(4), ITGA5(2), ITGA6(7), ITGA7(4), ITGA8(13), ITGA9(2), ITGB3BP(1), MAP2K4(1), MAP2K7(1), MAP3K11(2), MAPK1(1), MAPK10(1), MAPK8(2), MAPK8IP1(2), MAPK8IP3(3), MAPK9(1), MRAS(2), MYLK(8), MYLK2(3), P4HB(4), PAK1(2), PAK2(1), PAK3(1), PAK4(1), PAK7(6), PIK3CB(4), PKLR(4), PLCG1(3), PLCG2(4), PTK2(6), RAF1(1), RALA(3), RHO(1), ROCK1(5), ROCK2(3), SHC1(2), SOS1(11), SOS2(7), TLN1(6), TLN2(14), VASP(2), WAS(4), ZYX(1) 31742384 242 110 242 79 77 79 11 47 28 0 0.64 1.00 1.00 269 CELL_CYCLE_KEGG ABL1, ASK, ATM, BUB1, BUB1B, BUB3, CCNA1, CCNA2, CCNB1, CCNB2, CCNB3, CCND2, CCND3, CCNE1, CCNE2, CCNH, CDAN1, CDC14A, CDC14B, CDC14B, CDC14C, CDC2, CDC20, CDC25A, CDC25B, CDC25C, CDC45L, CDC6, CDC7, CDH1, CDK2, CDK4, CDKN1A, CDKN2A, CHEK1, CHEK2, DTX4, E2F1, E2F2, E2F3, E2F4, E2F5, E2F6, EP300, ESPL1, FLJ14001, GADD45A, GSK3B, HDAC1, HDAC2, HDAC3, HDAC4, HDAC5, HDAC6, HDAC7A, HDAC8, MAD1L1, MAD2L1, MAD2L2, MCM2, MCM3, MCM4, MCM5, MCM6, MCM7, MDM2, MPEG1, MPL, ORC1L, ORC2L, ORC3L, ORC4L, ORC5L, ORC6L, PCNA, PLK1, PRKDC, PTPRA, PTTG1, PTTG2, PTTG3, RB1, RBL1, SKP2, SMAD4, SMC1L1, TBC1D8, TFDP1, TGFB1, TP53, WEE1 79 ABL1(3), ATM(8), BUB1(4), BUB1B(6), BUB3(2), CCNA1(1), CCNA2(1), CCNB1(2), CCNB2(1), CCNB3(11), CCND2(3), CCND3(1), CCNE1(3), CCNE2(2), CDAN1(3), CDC14A(1), CDC14B(2), CDC20(1), CDC25B(2), CDC25C(1), CDC6(6), CDC7(3), CDH1(3), CDKN1A(2), CHEK1(5), CHEK2(3), DTX4(2), E2F1(2), E2F5(2), EP300(9), ESPL1(5), GADD45A(1), HDAC1(2), HDAC3(1), HDAC4(5), HDAC5(1), HDAC8(1), MAD1L1(6), MAD2L1(2), MCM2(1), MCM3(1), MCM4(5), MCM5(6), MCM6(3), MCM7(3), MDM2(2), MPEG1(6), MPL(2), ORC1L(3), ORC2L(1), ORC3L(2), ORC5L(3), PLK1(2), PRKDC(12), PTTG1(2), PTTG2(2), RBL1(5), SKP2(2), SMAD4(5), TBC1D8(1), TFDP1(3), TGFB1(1), WEE1(4) 28828524 196 109 195 48 61 63 13 31 28 0 0.10 1.00 1.00 270 HSA04640_HEMATOPOIETIC_CELL_LINEAGE Genes involved in hematopoietic cell lineage ANPEP, CD14, CD19, CD1A, CD1B, CD1C, CD1D, CD1E, CD2, CD22, CD24, CD33, CD34, CD36, CD37, CD38, CD3D, CD3E, CD3G, CD4, CD44, CD5, CD55, CD59, CD7, CD8A, CD8B, CD9, CR1, CR2, CSF1, CSF1R, CSF2, CSF2RA, CSF3, CSF3R, DNTT, EPO, EPOR, FCER2, FCGR1A, FLT3, FLT3LG, GP1BA, GP1BB, GP5, GP9, GYPA, HLA-DRA, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, IL11, IL11RA, IL1A, IL1B, IL1R1, IL1R2, IL2RA, IL3, IL3RA, IL4, IL4R, IL5, IL5RA, IL6, IL6R, IL7, IL7R, IL9R, ITGA1, ITGA2, ITGA2B, ITGA3, ITGA4, ITGA5, ITGA6, ITGAM, ITGB3, KIT, KITLG, MME, MS4A1, TFRC, THPO, TNF, TPO 82 ANPEP(8), CD14(2), CD19(2), CD1A(4), CD1B(6), CD1C(6), CD1D(4), CD1E(4), CD2(1), CD22(6), CD33(3), CD34(2), CD36(1), CD37(3), CD38(2), CD3D(1), CD4(1), CD44(5), CD5(2), CD55(1), CD7(1), CD8A(2), CD8B(1), CD9(1), CR1(7), CR2(11), CSF1(2), CSF1R(3), CSF2RA(7), CSF3R(7), DNTT(2), EPOR(2), FCER2(1), FCGR1A(1), FLT3(7), GP5(4), GP9(2), HLA-DRA(1), HLA-DRB1(2), HLA-DRB5(2), IL11RA(1), IL1A(1), IL1B(1), IL1R1(1), IL1R2(3), IL3(1), IL4(2), IL4R(2), IL5RA(3), IL6(1), IL6R(1), IL7(1), IL7R(8), IL9R(6), ITGA1(4), ITGA2(5), ITGA2B(2), ITGA3(1), ITGA4(4), ITGA5(2), ITGA6(7), ITGAM(7), ITGB3(4), KIT(7), MME(9), MS4A1(2), TFRC(2), TNF(1), TPO(10) 21851636 229 109 228 79 52 85 11 55 26 0 0.80 1.00 1.00 271 HSA04012_ERBB_SIGNALING_PATHWAY Genes involved in ErbB signaling pathway ABL1, ABL2, AKT1, AKT2, AKT3, ARAF, AREG, BAD, BRAF, BTC, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CBL, CBLB, CBLC, CDKN1A, CDKN1B, CRK, CRKL, EGF, EGFR, EIF4EBP1, ELK1, ERBB2, ERBB3, ERBB4, EREG, FRAP1, GAB1, GRB2, GSK3B, HBEGF, HRAS, JUN, KRAS, MAP2K1, MAP2K2, MAP2K4, MAP2K7, MAPK1, MAPK10, MAPK3, MAPK8, MAPK9, MYC, NCK1, NCK2, NRAS, NRG1, NRG2, NRG3, NRG4, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLCG1, PLCG2, PRKCA, PRKCB1, PRKCG, PTK2, RAF1, RPS6KB1, RPS6KB2, SHC1, SHC2, SHC3, SHC4, SOS1, SOS2, SRC, STAT5A, STAT5B, TGFA 84 ABL1(3), ABL2(7), AKT1(1), AKT3(3), ARAF(3), AREG(3), BRAF(8), BTC(1), CAMK2A(1), CAMK2B(2), CAMK2D(1), CBL(3), CBLB(7), CDKN1A(2), CRKL(1), EGF(6), EGFR(7), ERBB2(2), ERBB3(4), ERBB4(13), EREG(1), GAB1(2), HBEGF(1), HRAS(4), JUN(3), KRAS(2), MAP2K1(2), MAP2K2(1), MAP2K4(1), MAP2K7(1), MAPK1(1), MAPK10(1), MAPK3(1), MAPK8(2), MAPK9(1), MYC(1), NCK1(2), NCK2(1), NRAS(1), NRG1(3), NRG2(3), NRG3(9), PAK1(2), PAK2(1), PAK3(1), PAK4(1), PAK7(6), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PLCG1(3), PLCG2(4), PRKCA(5), PRKCG(9), PTK2(6), RAF1(1), RPS6KB1(1), RPS6KB2(1), SHC1(2), SHC2(4), SHC3(2), SHC4(5), SOS1(11), SOS2(7), STAT5A(2), TGFA(1) 26960770 232 108 230 70 71 85 11 34 31 0 0.38 1.00 1.00 272 HSA04660_T_CELL_RECEPTOR_SIGNALING_PATHWAY Genes involved in T cell receptor signaling pathway AKT1, AKT2, AKT3, BCL10, CARD11, CBL, CBLB, CBLC, CD247, CD28, CD3D, CD3E, CD3G, CD4, CD40LG, CD8A, CD8B, CDC42, CDK4, CHP, CHUK, CSF2, CTLA4, FOS, FYN, GRAP2, GRB2, HRAS, ICOS, IFNG, IKBKB, IKBKG, IL10, IL2, IL4, IL5, ITK, JUN, KRAS, LAT, LCK, LCP2, MALT1, MAP3K14, MAP3K8, NCK1, NCK2, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NRAS, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PDCD1, PDK1, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLCG1, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKCQ, PTPN6, PTPRC, RASGRP1, RHOA, SOS1, SOS2, TEC, TNF, VAV1, VAV2, VAV3, ZAP70 91 AKT1(1), AKT3(3), CARD11(5), CBL(3), CBLB(7), CD3D(1), CD4(1), CD40LG(3), CD8A(2), CD8B(1), CDC42(1), CHP(2), CHUK(2), CTLA4(1), FOS(2), FYN(5), HRAS(4), ICOS(2), IFNG(1), IKBKB(2), IL10(2), IL4(2), ITK(2), JUN(3), KRAS(2), LCK(3), LCP2(2), MALT1(1), MAP3K14(1), NCK1(2), NCK2(1), NFAT5(3), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), NFKB1(2), NFKB2(2), NFKBIB(1), NFKBIE(1), NRAS(1), PAK1(2), PAK2(1), PAK3(1), PAK4(1), PAK7(6), PDCD1(2), PDK1(1), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PLCG1(3), PPP3CA(4), PPP3CB(4), PPP3CC(2), PPP3R1(1), PPP3R2(4), PRKCQ(4), PTPRC(7), RASGRP1(1), SOS1(11), SOS2(7), TEC(4), TNF(1), VAV1(7), VAV2(4), VAV3(1), ZAP70(4) 26625774 213 106 212 58 66 68 16 34 29 0 0.23 1.00 1.00 273 MRNA_PROCESSING_REACTOME BRUNOL4, C10orf9, C20orf14, CD2BP2, CDC40, CLK2, CLK3, CLK4, COL2A1, CPSF1, CPSF2, CPSF3, CPSF4, CSTF1, CSTF2, CSTF2T, CSTF3, CUGBP1, CUGBP2, DDIT3, DDX1, DDX20, DHX15, DHX16, DHX38, DHX8, DHX9, DICER1, DNAJC8, FLJ10748, FNBP3, FUS, FUSIP1, GIPC1, HEAB, HNRPA2B1, HNRPA3, HNRPA3P1, HNRPA3, LOC387933, HNRPA3P1, HNRPA3, LOC389395, HNRPAB, HNRPC, HNRPC, HNRPCL1, LOC390615, LOC440563, HNRPD, HNRPH1, HNRPH2, HNRPL, HNRPR, HNRPU, HRMT1L2, LSM2, LSM7, METTL3, NCBP1, NCBP2, NONO, NUDT21, NXF1, PABPN1, PAPOLA, PHF5A, POLR2A, PPM1G, PRPF18, PRPF3, PRPF4, PRPF4B, PRPF8, PSKH1, PTBP1, PTBP2, RBM17, RBM5, RNGTT, RNMT, RNPC2, RNPS1, SF3A1, SF3A2, SF3A3, SF3B1, SF3B2, SF3B4, SF3B5, SF4, SFRS10, SFRS12, SFRS14, SFRS16, SFRS2, SFRS4, SFRS5, SFRS6, SFRS7, SFRS8, SFRS9, SMC1L1, SNRP70, SNRPA, SNRPA1, SNRPB, SNRPB2, SNRPD1, SNRPD2, SNRPD3, SNRPE, SNRPF, SNRPG, SNRPN, SNRPN, PAR1, SNRPN, SNURF, SPOP, SRPK1, SRPK2, SRRM1, SUPT5H, TMP21, TXNL4A, U2AF1, U2AF2, WDR57, XRN2 92 CD2BP2(3), CDC40(2), CLK2(2), CLK3(1), CLK4(2), COL2A1(12), CPSF1(4), CPSF2(3), CPSF3(2), CPSF4(2), CSTF2(2), CSTF2T(3), CSTF3(1), DDX1(6), DHX15(3), DHX16(2), DHX38(2), DHX8(2), DHX9(5), DICER1(13), FUS(1), METTL3(1), NCBP1(2), NONO(1), NXF1(2), PAPOLA(1), POLR2A(2), PRPF3(1), PRPF4(2), PRPF4B(6), PRPF8(7), PSKH1(1), PTBP2(3), RBM17(1), RBM5(2), RNMT(2), RNPS1(1), SF3A1(1), SF3A2(2), SF3A3(2), SF3B1(4), SF3B2(4), SF3B4(1), SF4(3), SFRS12(1), SFRS14(5), SFRS2(2), SFRS6(1), SFRS7(2), SFRS8(2), SFRS9(1), SNRPA(2), SNRPA1(1), SNRPB(3), SNRPD1(2), SNRPD2(1), SNRPD3(1), SNRPF(1), SNRPN(5), SPOP(1), SRPK1(3), SRRM1(4), SUPT5H(2), U2AF2(1), XRN2(3) 28344008 169 105 167 42 46 59 11 34 19 0 0.27 1.00 1.00 274 NO1PATHWAY Shear stress in endothelial cells increases cytoplasmic calcium, which activates nitric oxide synthase III to release NO, which in turn regulates cardiac contractions. ACTA1, AKT1, BDK, BDKRB2, CALM1, CALM2, CALM3, CAV1, CHRM1, CHRNA1, FLT1, FLT4, HSPCA, KDR, NOS3, PDE2A, PDE3A, PDE3B, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKG1, PRKG2, RYR2, SLC7A1, SYT1, TNNI1, VEGF 28 ACTA1(3), AKT1(1), BDKRB2(3), CALM2(1), CHRNA1(4), FLT1(11), FLT4(5), KDR(15), NOS3(2), PDE2A(4), PDE3A(7), PDE3B(5), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PRKG1(6), PRKG2(4), RYR2(112), SLC7A1(4), SYT1(4) 11048104 201 105 199 56 46 75 18 36 26 0 0.20 1.00 1.00 275 PEPTIDE_GPCRS AGTR1, AGTR2, ATP8A1, AVPR1A, AVPR1B, AVPR2, BDKRB1, BDKRB2, BLR1, BRS3, C3AR1, C5R1, CCKAR, CCKBR, CCR1, CCR10, CCR2, CCR3, CCR4, CCR5, CCR6, CCR7, CCR8, CX3CR1, CXCR3, CXCR4, CXCR6, EDNRA, EDNRB, ELA3A, FPR1, FPRL1, FPRL2, FSHR, FY, GALR1, GALR2, GALR3, GALT, GHSR, GNB2L1, GNRHR, GPR77, GRPR, IL8RA, IL8RB, LHCGR, MC1R, MC2R, MC3R, MC4R, MC5R, NMBR, NPY1R, NPY2R, NPY5R, NPY6R, NTSR1, NTSR2, OPRD1, OPRK1, OPRL1, OPRM1, OXTR, PPYR1, SSTR1, SSTR2, SSTR3, SSTR4, TAC4, TACR1, TACR2, TACR3, TRHR, TSHR 66 AGTR1(5), AGTR2(3), ATP8A1(9), AVPR1A(3), AVPR1B(2), AVPR2(4), BDKRB1(2), BDKRB2(3), C3AR1(2), CCKAR(2), CCKBR(2), CCR1(3), CCR10(1), CCR2(1), CCR3(1), CCR4(3), CCR5(2), CCR6(2), CCR8(1), CX3CR1(3), CXCR3(1), CXCR4(5), EDNRA(1), EDNRB(5), FPR1(1), FSHR(15), GALR1(5), GALT(1), GHSR(4), GPR77(3), GRPR(3), LHCGR(9), MC2R(2), MC3R(2), MC4R(2), MC5R(3), NMBR(3), NPY1R(3), NPY2R(4), NPY5R(4), NTSR1(4), NTSR2(3), OPRD1(2), OPRK1(1), OPRL1(2), OPRM1(6), OXTR(1), PPYR1(4), SSTR1(3), SSTR2(2), SSTR3(2), SSTR4(2), TACR1(3), TACR2(1), TACR3(4), TRHR(2), TSHR(5) 13951284 177 105 177 68 30 72 11 36 28 0 0.53 1.00 1.00 276 HSA04662_B_CELL_RECEPTOR_SIGNALING_PATHWAY Genes involved in B cell receptor signaling pathway AKT1, AKT2, AKT3, BCL10, BLNK, BTK, CARD11, CD19, CD22, CD72, CD79A, CD79B, CD81, CHP, CHUK, CR2, FCGR2B, FOS, GSK3B, HRAS, IFITM1, IKBKB, IKBKG, INPP5D, JUN, KRAS, LILRB3, LYN, MALT1, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NRAS, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLCG2, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKCB1, PTPN6, RAC1, RAC2, RAC3, RASGRP3, SYK, VAV1, VAV2, VAV3 61 AKT1(1), AKT3(3), BLNK(1), BTK(7), CARD11(5), CD19(2), CD22(6), CD79A(1), CD81(2), CHP(2), CHUK(2), CR2(11), FCGR2B(3), FOS(2), HRAS(4), IKBKB(2), INPP5D(8), JUN(3), KRAS(2), LILRB3(4), LYN(2), MALT1(1), NFAT5(3), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), NFKB1(2), NFKB2(2), NFKBIB(1), NFKBIE(1), NRAS(1), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PLCG2(4), PPP3CA(4), PPP3CB(4), PPP3CC(2), PPP3R1(1), PPP3R2(4), RAC1(1), RASGRP3(7), SYK(1), VAV1(7), VAV2(4), VAV3(1) 19349490 174 104 173 50 50 57 13 25 29 0 0.31 1.00 1.00 277 GPCRDB_OTHER ADORA3, ALG6, C5R1, CCKBR, CCR2, CCR3, CCR5, CELSR1, CELSR2, CELSR3, CHRM2, CHRM3, CIDEB, CXCR3, DRD4, EBI2, EDG1, EDNRA, ELA3A, EMR2, EMR3, F2R, FSHR, FY, GHRHR, GNRHR, GPR, GPR116, GPR132, GPR133, GPR135, GPR143, GPR145, GPR17, GPR18, GPR55, GPR56, GPR61, GPR73L1, GPR77, GPR84, GPR88, GRCA, GRM1, GRPR, HRH4, IL8RA, IL8RB, LGR6, LGR7, LPHN2, LPHN3, LTB4R2, MASS1, NTSR1, OR2A9P, OR2M4, OR5E1P, OR7E19P, OR7E47P, OR7E37P, OR7E18P, OR7E35P, LOC441453, OR8G1, LOC442754, OR8G2, P2RY11, P2RY13, PTGFR, RLN3R1, SMO, SSTR2, TAAR5, TSHR, VN1R1 53 ADORA3(1), ALG6(2), CCKBR(2), CCR2(1), CCR3(1), CCR5(2), CELSR1(11), CELSR2(8), CELSR3(10), CHRM2(8), CHRM3(5), CXCR3(1), DRD4(1), EDNRA(1), EMR2(4), EMR3(5), F2R(2), FSHR(15), GHRHR(4), GPR116(5), GPR132(1), GPR133(2), GPR135(2), GPR143(2), GPR17(4), GPR18(2), GPR55(1), GPR56(1), GPR61(2), GPR77(3), GRM1(12), GRPR(3), HRH4(4), LGR6(2), LPHN2(7), LPHN3(17), LTB4R2(1), NTSR1(4), OR2M4(4), OR8G2(3), P2RY13(1), PTGFR(5), SMO(1), SSTR2(2), TAAR5(5), TSHR(5), VN1R1(4) 17894696 189 103 189 63 52 67 14 38 18 0 0.20 1.00 1.00 278 HSA04664_FC_EPSILON_RI_SIGNALING_PATHWAY Genes involved in Fc epsilon RI signaling pathway AKT1, AKT2, AKT3, BTK, CSF2, FCER1A, FCER1G, FYN, GAB2, GRB2, HRAS, IL13, IL3, IL4, IL5, INPP5D, KRAS, LAT, LCP2, LYN, MAP2K1, MAP2K2, MAP2K3, MAP2K4, MAP2K6, MAP2K7, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK8, MAPK9, MS4A2, NRAS, PDK1, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLCG1, PLCG2, PRKCA, PRKCB1, PRKCD, PRKCE, RAC1, RAC2, RAC3, RAF1, SOS1, SOS2, SYK, TNF, VAV1, VAV2, VAV3 73 AKT1(1), AKT3(3), BTK(7), FCER1A(3), FCER1G(1), FYN(5), GAB2(1), HRAS(4), IL3(1), IL4(2), INPP5D(8), KRAS(2), LCP2(2), LYN(2), MAP2K1(2), MAP2K2(1), MAP2K3(3), MAP2K4(1), MAP2K6(2), MAP2K7(1), MAPK1(1), MAPK10(1), MAPK11(2), MAPK13(2), MAPK14(1), MAPK3(1), MAPK8(2), MAPK9(1), MS4A2(4), NRAS(1), PDK1(1), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PLA2G2A(1), PLA2G2E(2), PLA2G2F(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5), PLCG1(3), PLCG2(4), PRKCA(5), PRKCD(2), PRKCE(3), RAC1(1), RAF1(1), SOS1(11), SOS2(7), SYK(1), TNF(1), VAV1(7), VAV2(4), VAV3(1) 18796978 177 103 177 46 47 65 17 21 27 0 0.13 1.00 1.00 279 HSA04620_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY Genes involved in Toll-like receptor signaling pathway AKT1, AKT2, AKT3, CASP8, CCL3, CCL4, CCL5, CD14, CD40, CD80, CD86, CHUK, CXCL10, CXCL11, CXCL9, FADD, FOS, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, IFNAR1, IFNAR2, IFNB1, IKBKB, IKBKE, IKBKG, IL12A, IL12B, IL1B, IL6, IL8, IRAK1, IRAK4, IRF3, IRF5, IRF7, JUN, LBP, LY96, MAP2K1, MAP2K2, MAP2K3, MAP2K4, MAP2K6, MAP2K7, MAP3K7, MAP3K7IP1, MAP3K7IP2, MAP3K8, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK8, MAPK9, MYD88, NFKB1, NFKB2, NFKBIA, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, RAC1, RELA, RIPK1, SPP1, STAT1, TBK1, TICAM1, TICAM2, TIRAP, TLR1, TLR2, TLR3, TLR4, TLR5, TLR6, TLR7, TLR8, TLR9, TNF, TOLLIP, TRAF3, TRAF6 96 AKT1(1), AKT3(3), CASP8(2), CCL3(2), CD14(2), CD40(2), CD80(3), CD86(3), CHUK(2), FADD(1), FOS(2), IFNA1(1), IFNA14(2), IFNA16(2), IFNA17(1), IFNA4(1), IFNA6(1), IFNA7(1), IFNA8(2), IFNAR1(2), IFNB1(2), IKBKB(2), IKBKE(3), IL12A(1), IL12B(3), IL1B(1), IL6(1), IRAK1(3), IRF3(1), JUN(3), LBP(4), MAP2K1(2), MAP2K2(1), MAP2K3(3), MAP2K4(1), MAP2K6(2), MAP2K7(1), MAP3K7(2), MAPK1(1), MAPK10(1), MAPK11(2), MAPK13(2), MAPK14(1), MAPK3(1), MAPK8(2), MAPK9(1), NFKB1(2), NFKB2(2), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), RAC1(1), RELA(3), SPP1(1), STAT1(2), TBK1(3), TLR1(2), TLR2(3), TLR3(2), TLR4(10), TLR5(2), TLR7(3), TLR8(3), TLR9(2), TNF(1), TOLLIP(1), TRAF3(3), TRAF6(5) 23354668 169 98 168 60 59 48 11 27 24 0 0.76 1.00 1.00 280 CALCINEURIN_NF_AT_SIGNALING Mouse genes associated with signal transduction through calcium, calcineurin, and NF-AT. ACTB, BAD, BCL2, CABIN1, CALM1, CALM2, CALM3, CAMK2B, CAMK4, CD3E, CD3G, CD3Z, CD69, CDKN1A, CEBPB, CNR1, CREBBP, CSF2, CSNK2A1, CSNK2B, CTLA4, EGR2, EGR3, EP300, FCER1A, FCGR3A, FKBP1B, FLJ14639, FOS, FOSL1, GAPD, GATA3, GATA4, GRLF1, GSK3A, GSK3B, HRAS, ICOS, IFNA1, IFNB1, IFNG, IL10, IL13, IL1B, IL2, IL2RA, IL3, IL4, IL6, IL8, IL8RA, ITK, JUNB, KPNA5, KPNB3, MAP2K7, MAPK14, MAPK8, MAPK9, MEF2A, MEF2B, MEF2D, MYF5, NCK2, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NFKB2, NFKBIB, NFKBIE, NPPB, NUP214, OPRD1, P2RX7, PAK1, PIN1, PPIA, PPP3CB, PPP3CC, PPP3R1, PTPRC, RELA, RPL13A, SFN, SLA, SP1, SP3, TGFB1, TNF, TNFSF5, TNFSF6, TRAF2, TRPV6, VAV1, VAV2, VAV3, VEGF, XPO5 91 ACTB(1), CABIN1(5), CALM2(1), CAMK2B(2), CAMK4(3), CDKN1A(2), CNR1(5), CREBBP(17), CSNK2A1(3), CTLA4(1), EGR2(6), EGR3(2), EP300(9), FCER1A(3), FCGR3A(4), FKBP1B(1), FOS(2), FOSL1(1), GATA3(6), GRLF1(13), GSK3A(3), HRAS(4), ICOS(2), IFNA1(1), IFNB1(2), IFNG(1), IL10(2), IL1B(1), IL3(1), IL4(2), IL6(1), ITK(2), KPNA5(2), MAP2K7(1), MAPK14(1), MAPK8(2), MAPK9(1), MEF2A(3), MYF5(6), NCK2(1), NFAT5(3), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), NFKB2(2), NFKBIB(1), NFKBIE(1), NPPB(1), NUP214(4), OPRD1(2), P2RX7(2), PAK1(2), PPP3CB(4), PPP3CC(2), PPP3R1(1), PTPRC(7), RELA(3), SFN(2), SLA(2), SP1(2), SP3(1), TGFB1(1), TNF(1), TRPV6(3), VAV1(7), VAV2(4), VAV3(1), XPO5(2) 24115796 202 94 201 56 55 70 15 37 25 0 0.25 1.00 1.00 281 HSA04370_VEGF_SIGNALING_PATHWAY Genes involved in VEGF signaling pathway AKT1, AKT2, AKT3, BAD, CASP9, CDC42, CHP, HRAS, KDR, KRAS, MAP2K1, MAP2K2, MAPK1, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPKAPK2, MAPKAPK3, NFAT5, NFATC1, NFATC2, NFATC3, NFATC4, NOS3, NRAS, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLCG1, PLCG2, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKCA, PRKCB1, PRKCG, PTGS2, PTK2, PXN, RAC1, RAC2, RAC3, RAF1, SH2D2A, SHC2, SPHK1, SPHK2, SRC, VEGFA 68 AKT1(1), AKT3(3), CASP9(3), CDC42(1), CHP(2), HRAS(4), KDR(15), KRAS(2), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK11(2), MAPK13(2), MAPK14(1), MAPK3(1), MAPKAPK2(2), MAPKAPK3(1), NFAT5(3), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), NOS3(2), NRAS(1), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PLA2G2A(1), PLA2G2E(2), PLA2G2F(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5), PLCG1(3), PLCG2(4), PPP3CA(4), PPP3CB(4), PPP3CC(2), PPP3R1(1), PPP3R2(4), PRKCA(5), PRKCG(9), PTK2(6), PXN(3), RAC1(1), RAF1(1), SH2D2A(2), SHC2(4), SPHK2(1) 18758886 176 94 175 56 56 64 12 18 26 0 0.42 1.00 1.00 282 MAPKPATHWAY The mitogen-activated protein (MAP) kinase pathway is a common signaling mechanism and has four main sub-pathways: Erk, JNK/SAPK, p53, and ERK5. ARAF1, ATF2, BRAF, CEBPA, CHUK, CREB1, DAXX, ELK1, FOS, GRB2, HRAS, IKBKB, JUN, MAP2K1, MAP2K2, MAP2K3, MAP2K4, MAP2K5, MAP2K6, MAP2K7, MAP3K1, MAP3K10, MAP3K11, MAP3K12, MAP3K13, MAP3K14, MAP3K2, MAP3K3, MAP3K4, MAP3K5, MAP3K6, MAP3K7, MAP3K8, MAP3K9, MAP4K1, MAP4K2, MAP4K3, MAP4K4, MAP4K5, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK4, MAPK6, MAPK7, MAPK8, MAPK9, MAPKAPK2, MAPKAPK3, MAPKAPK5, MAX, MEF2A, MEF2B, MEF2C, MEF2D, MKNK1, MKNK2, MYC, NFKB1, NFKBIA, PAK1, PAK2, PDZGEF1, RAC1, RAF1, RELA, RIPK1, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA4, RPS6KA5, RPS6KB1, RPS6KB2, SHC1, SP1, STAT1, TGFB1, TGFB2, TGFB3, TGFBR1, TRADD, TRAF2 83 ATF2(3), BRAF(8), CHUK(2), CREB1(1), DAXX(3), FOS(2), HRAS(4), IKBKB(2), JUN(3), MAP2K1(2), MAP2K2(1), MAP2K3(3), MAP2K4(1), MAP2K5(1), MAP2K6(2), MAP2K7(1), MAP3K1(3), MAP3K11(2), MAP3K12(4), MAP3K13(5), MAP3K14(1), MAP3K3(1), MAP3K4(4), MAP3K5(4), MAP3K6(1), MAP3K7(2), MAP3K9(4), MAP4K1(3), MAP4K2(1), MAP4K3(7), MAP4K4(7), MAP4K5(1), MAPK1(1), MAPK10(1), MAPK11(2), MAPK13(2), MAPK14(1), MAPK3(1), MAPK4(2), MAPK6(4), MAPK7(1), MAPK8(2), MAPK9(1), MAPKAPK2(2), MAPKAPK3(1), MAPKAPK5(3), MEF2A(3), MEF2C(4), MKNK2(1), MYC(1), NFKB1(2), PAK1(2), PAK2(1), RAC1(1), RAF1(1), RELA(3), RPS6KA1(2), RPS6KA2(6), RPS6KA3(1), RPS6KA4(1), RPS6KA5(4), RPS6KB1(1), RPS6KB2(1), SHC1(2), SP1(2), STAT1(2), TGFB1(1), TGFB2(3), TRADD(1) 25390632 159 94 157 60 53 57 8 22 19 0 0.90 1.00 1.00 283 HSA04320_DORSO_VENTRAL_AXIS_FORMATION Genes involved in dorso-ventral axis formation BRAF, CPEB1, EGFR, ERBB2, ERBB4, ETS1, ETS2, ETV6, ETV7, FMN2, GRB2, KRAS, MAP2K1, MAPK1, MAPK3, NOTCH1, NOTCH2, NOTCH3, NOTCH4, PIWIL1, PIWIL2, PIWIL3, PIWIL4, RAF1, SOS1, SOS2, SPIRE1, SPIRE2 28 BRAF(8), CPEB1(1), EGFR(7), ERBB2(2), ERBB4(13), ETS1(2), ETV6(4), FMN2(28), KRAS(2), MAP2K1(2), MAPK1(1), MAPK3(1), NOTCH1(16), NOTCH2(10), NOTCH3(7), NOTCH4(4), PIWIL1(8), PIWIL2(4), PIWIL3(4), RAF1(1), SOS1(11), SOS2(7), SPIRE1(2), SPIRE2(6) 14019992 151 93 149 46 37 53 7 29 25 0 0.57 1.00 1.00 284 HSA04920_ADIPOCYTOKINE_SIGNALING_PATHWAY Genes involved in adipocytokine signaling pathway ACACB, ACSL1, ACSL3, ACSL4, ACSL5, ACSL6, ADIPOQ, ADIPOR1, ADIPOR2, AGRP, AKT1, AKT2, AKT3, CAMKK1, CAMKK2, CD36, CHUK, CPT1A, CPT1B, CPT1C, CPT2, FRAP1, G6PC, G6PC2, IKBKB, IKBKG, IRS1, IRS2, IRS4, JAK1, JAK2, JAK3, LEP, LEPR, MAPK10, MAPK8, MAPK9, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NPY, PCK1, PCK2, POMC, PPARA, PPARGC1A, PRKAA1, PRKAA2, PRKAB1, PRKAB2, PRKAG1, PRKAG2, PRKAG3, PRKCQ, PTPN11, RELA, RXRA, RXRB, RXRG, SLC2A1, SLC2A4, SOCS3, STAT3, STK11, TNF, TNFRSF1A, TNFRSF1B, TRADD, TRAF2, TYK2 70 ACACB(9), ACSL1(2), ACSL3(2), ACSL4(2), ACSL6(2), ADIPOQ(2), ADIPOR2(4), AKT1(1), AKT3(3), CAMKK2(1), CD36(1), CHUK(2), CPT1A(5), CPT1B(3), CPT1C(3), CPT2(2), G6PC(3), G6PC2(3), IKBKB(2), IRS1(6), IRS2(2), IRS4(2), JAK1(2), JAK2(4), JAK3(7), LEPR(15), MAPK10(1), MAPK8(2), MAPK9(1), NFKB1(2), NFKB2(2), NFKBIB(1), NFKBIE(1), PCK1(2), PCK2(1), POMC(1), PPARA(1), PPARGC1A(6), PRKAA2(5), PRKAB2(1), PRKAG2(4), PRKAG3(3), PRKCQ(4), PTPN11(3), RELA(3), RXRA(2), RXRG(7), SLC2A1(1), SLC2A4(2), SOCS3(1), STAT3(2), STK11(3), TNF(1), TNFRSF1A(2), TNFRSF1B(1), TRADD(1), TYK2(8) 22215824 165 93 164 45 44 57 10 25 29 0 0.13 1.00 1.00 285 SIG_BCR_SIGNALING_PATHWAY Members of the BCR signaling pathway AKT1, AKT2, AKT3, BAD, BCL2, BCR, BLNK, BTK, CD19, CD22, CD81, CR2, CSK, DAG1, FLOT1, FLOT2, GRB2, GSK3A, GSK3B, INPP5D, ITPR1, ITPR2, ITPR3, LYN, MAP4K1, MAPK1, MAPK3, NFATC1, NFATC2, NR0B2, PDK1, PIK3CA, PIK3CD, PIK3R1, PLCG2, PPP1R13B, PPP3CA, PPP3CB, PPP3CC, PTPRC, RAF1, SHC1, SOS1, SOS2, SYK, VAV1 45 AKT1(1), AKT3(3), BCR(2), BLNK(1), BTK(7), CD19(2), CD22(6), CD81(2), CR2(11), DAG1(2), FLOT1(1), FLOT2(1), GSK3A(3), INPP5D(8), ITPR1(6), ITPR2(13), ITPR3(4), LYN(2), MAP4K1(3), MAPK1(1), MAPK3(1), NFATC1(3), NFATC2(4), NR0B2(1), PDK1(1), PIK3CD(4), PIK3R1(2), PLCG2(4), PPP1R13B(5), PPP3CA(4), PPP3CB(4), PPP3CC(2), PTPRC(7), RAF1(1), SHC1(2), SOS1(11), SOS2(7), SYK(1), VAV1(7) 19277222 150 93 149 54 43 52 8 25 22 0 0.77 1.00 1.00 286 HSA00561_GLYCEROLIPID_METABOLISM Genes involved in glycerolipid metabolism ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, AGK, AGPAT1, AGPAT2, AGPAT3, AGPAT4, AGPAT6, AKR1A1, AKR1B1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, CEL, DAK, DGAT1, DGAT2, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKI, DGKQ, DGKZ, GK, GK2, GLA, GLB1, GPAM, LCT, LIPA, LIPC, LIPF, LIPG, LPL, LYCAT, MGLL, PNLIP, PNLIPRP1, PNLIPRP2, PNPLA3, PPAP2A, PPAP2B, PPAP2C, UGCGL1, UGCGL2 55 ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH5(1), ADH7(1), ADHFE1(2), AGPAT3(1), AGPAT4(1), AGPAT6(1), AKR1B1(1), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH7A1(1), ALDH9A1(2), CEL(1), DAK(1), DGAT1(1), DGAT2(3), DGKA(3), DGKB(5), DGKD(6), DGKE(4), DGKG(2), DGKI(13), DGKQ(1), DGKZ(4), GK(4), GK2(6), GLA(2), GPAM(3), LCT(18), LIPA(2), LIPC(2), LIPF(1), LIPG(3), LPL(3), MGLL(1), PNLIP(11), PNLIPRP1(3), PNLIPRP2(4), PNPLA3(1), PPAP2B(2) 15832032 133 90 133 53 36 58 3 26 10 0 0.85 1.00 1.00 287 SIG_PIP3_SIGNALING_IN_CARDIAC_MYOCTES Genes related to PIP3 signaling in cardiac myocytes AKT1, AKT2, AKT3, BAD, BCL2L1, CDC42, CDK2, CDKN1B, CDKN2A, CREB1, CREB3, CREB5, EBP, ERBB4, F2RL2, FOXO3A, FRAP1, GAB1, GADD45A, GRB2, GSK3A, GSK3B, IFI27, IGF1, IGFBP1, INPPL1, IRS1, IRS2, IRS4, MET, MYC, NOLC1, P101-PI3K, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PARD3, PARD6A, PDK1, PIK3CA, PIK3CD, PPP1R13B, PREX1, PSCD3, PTEN, PTK2, PTPN1, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KB1, SFN, SHC1, SLC2A4, SOS1, SOS2, TSC1, TSC2, YWHAB, YWHAE, YWHAG, YWHAH, YWHAQ, YWHAZ 60 AKT1(1), AKT3(3), BCL2L1(1), CDC42(1), CREB1(1), CREB3(2), CREB5(3), ERBB4(13), F2RL2(1), GAB1(2), GADD45A(1), GSK3A(3), IGF1(3), INPPL1(4), IRS1(6), IRS2(2), IRS4(2), MET(4), MYC(1), NOLC1(4), PAK1(2), PAK2(1), PAK3(1), PAK4(1), PAK7(6), PARD3(8), PARD6A(1), PDK1(1), PIK3CD(4), PPP1R13B(5), PREX1(14), PTK2(6), PTPN1(1), RPS6KA1(2), RPS6KA2(6), RPS6KA3(1), RPS6KB1(1), SFN(2), SHC1(2), SLC2A4(2), SOS1(11), SOS2(7), TSC1(5), TSC2(5), YWHAB(1), YWHAQ(1) 19751058 155 90 155 54 47 52 8 25 23 0 0.79 1.00 1.00 288 HSA00562_INOSITOL_PHOSPHATE_METABOLISM Genes involved in inositol phosphate metabolism CARKL, FN3K, IMPA1, IMPA2, INPP1, INPP4A, INPP4B, INPP5A, INPP5B, INPP5E, INPPL1, IPMK, ISYNA1, ITGB1BP3, ITPK1, ITPKA, ITPKB, MINPP1, MIOX, OCRL, PI4KA, PI4KB, PIB5PA, PIK3C3, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIP4K2A, PIP4K2B, PIP4K2C, PIP5K1A, PIP5K1B, PIP5K1C, PIP5K3, PLCB1, PLCB2, PLCB3, PLCB4, PLCD1, PLCD3, PLCD4, PLCE1, PLCG1, PLCG2, PLCZ1, PTEN, PTPMT1, SKIP, SYNJ1, SYNJ2 45 FN3K(1), IMPA1(2), INPP1(1), INPP4A(5), INPP4B(6), INPP5A(4), INPP5B(7), INPP5E(2), INPPL1(4), IPMK(2), ITPK1(3), ITPKA(1), ITPKB(6), MIOX(1), OCRL(8), PI4KA(7), PI4KB(1), PIK3C3(5), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIP4K2A(3), PIP4K2B(2), PIP4K2C(3), PIP5K1A(4), PIP5K1B(2), PIP5K1C(2), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), PLCD1(1), PLCD3(1), PLCE1(13), PLCG1(3), PLCG2(4), PLCZ1(5), SYNJ1(4), SYNJ2(3) 19137492 165 87 164 50 46 57 7 30 25 0 0.36 1.00 1.00 289 HSA03320_PPAR_SIGNALING_PATHWAY Genes involved in PPAR signaling pathway ACAA1, ACADL, ACADM, ACOX1, ACOX2, ACOX3, ACSL1, ACSL3, ACSL4, ACSL5, ACSL6, ADIPOQ, ANGPTL4, APOA1, APOA2, APOA5, APOC3, AQP7, CD36, CPT1A, CPT1B, CPT1C, CPT2, CYP27A1, CYP4A11, CYP4A22, CYP7A1, CYP8B1, DBI, EHHADH, FABP1, FABP2, FABP3, FABP4, FABP5, FABP5L1, FABP6, FABP7, FADS2, GK, GK2, HMGCS2, ILK, LOC642956, LPL, ME1, MMP1, NR1H3, OLR1, PCK1, PCK2, PDPK1, PLIN, PLTP, PPARA, PPARD, PPARG, RXRA, RXRB, RXRG, SCD, SCP2, SLC27A1, SLC27A2, SLC27A4, SLC27A5, SLC27A6, SORBS1, UBC, UCP1 67 ACAA1(1), ACADL(2), ACADM(1), ACOX1(2), ACOX2(1), ACOX3(5), ACSL1(2), ACSL3(2), ACSL4(2), ACSL6(2), ADIPOQ(2), ANGPTL4(1), APOA2(1), APOA5(3), APOC3(2), AQP7(1), CD36(1), CPT1A(5), CPT1B(3), CPT1C(3), CPT2(2), CYP27A1(1), CYP4A22(2), CYP7A1(5), CYP8B1(1), DBI(2), EHHADH(1), FABP1(1), FABP5(1), FABP6(1), FABP7(1), FADS2(1), GK(4), GK2(6), HMGCS2(3), ILK(1), LPL(3), ME1(2), MMP1(3), NR1H3(2), PCK1(2), PCK2(1), PDPK1(1), PLTP(2), PPARA(1), PPARD(2), RXRA(2), RXRG(7), SCD(1), SCP2(1), SLC27A1(1), SLC27A2(5), SLC27A4(2), SLC27A5(4), SLC27A6(5), SORBS1(5), UBC(1), UCP1(2) 17537806 130 86 130 52 25 50 10 29 16 0 0.90 1.00 1.00 290 G1_TO_S_CELL_CYCLE_REACTOME ATM, CCNA1, CCNB1, CCND1, CCND2, CCND3, CCNE1, CCNE2, CCNG2, CCNH, CDC25A, CDC45L, CDK2, CDK4, CDK7, CDKN1A, CDKN1B, CDKN1C, CDKN2A, CDKN2B, CDKN2C, CDKN2D, CREB3, CREB3L1, CREB3L3, CREB3L4, CREBL1, CREBL1, TNXB, E2F1, E2F2, E2F3, E2F4, E2F5, E2F6, FLJ14001, GADD45A, GBA2, MCM2, MCM3, MCM4, MCM5, MCM6, MCM7, MDM2, MNAT1, MYC, MYT1, NACA, NACA, FKSG17, ORC1L, ORC2L, ORC3L, ORC4L, ORC5L, ORC6L, PCNA, POLA2, POLE, POLE2, PRIM1, PRIM2A, RB1, RBL1, RPA1, RPA2, RPA3, TFDP1, TFDP2, TP53, WEE1 61 ATM(8), CCNA1(1), CCNB1(2), CCND1(1), CCND2(3), CCND3(1), CCNE1(3), CCNE2(2), CDK7(1), CDKN1A(2), CDKN2B(1), CDKN2C(1), CREB3(2), CREB3L3(1), CREB3L4(2), E2F1(2), E2F5(2), GADD45A(1), MCM2(1), MCM3(1), MCM4(5), MCM5(6), MCM6(3), MCM7(3), MDM2(2), MYC(1), MYT1(4), ORC1L(3), ORC2L(1), ORC3L(2), ORC5L(3), POLE(7), POLE2(2), PRIM1(3), RBL1(5), RPA1(1), RPA2(1), TFDP1(3), TFDP2(3), TNXB(19), WEE1(4) 19846822 119 85 119 30 38 42 5 19 15 0 0.19 1.00 1.00 291 HSA04210_APOPTOSIS Genes involved in apoptosis AIFM1, AKT1, AKT2, AKT3, APAF1, ATM, BAD, BAX, BCL2, BCL2L1, BID, BIRC2, BIRC3, BIRC4, CAPN1, CAPN2, CASP10, CASP3, CASP6, CASP7, CASP8, CASP9, CFLAR, CHP, CHUK, CSF2RB, CYCS, DFFA, DFFB, ENDOG, FADD, FAS, FASLG, IKBKB, IKBKG, IL1A, IL1B, IL1R1, IL1RAP, IL3, IL3RA, IRAK1, IRAK2, IRAK3, IRAK4, MAP3K14, MYD88, NFKB1, NFKB2, NFKBIA, NGFB, NTRK1, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PPP3CA, PPP3CB, PPP3CC, PPP3R1, PPP3R2, PRKACA, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, RELA, RIPK1, TNF, TNFRSF10A, TNFRSF10B, TNFRSF10C, TNFRSF10D, TNFRSF1A, TNFSF10, TP53, TRADD, TRAF2 79 AIFM1(1), AKT1(1), AKT3(3), APAF1(4), ATM(8), BAX(1), BCL2L1(1), BIRC2(1), BIRC3(3), CAPN1(2), CAPN2(2), CASP10(3), CASP7(2), CASP8(2), CASP9(3), CFLAR(1), CHP(2), CHUK(2), CSF2RB(5), DFFB(2), FADD(1), FAS(1), FASLG(1), IKBKB(2), IL1A(1), IL1B(1), IL1R1(1), IL1RAP(2), IL3(1), IRAK1(3), IRAK2(1), IRAK3(4), MAP3K14(1), NFKB1(2), NFKB2(2), NTRK1(4), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PPP3CA(4), PPP3CB(4), PPP3CC(2), PPP3R1(1), PPP3R2(4), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), RELA(3), TNF(1), TNFRSF10A(1), TNFRSF10B(1), TNFRSF1A(2), TRADD(1) 21699624 146 85 145 56 45 46 8 22 25 0 0.90 1.00 1.00 292 HSA04340_HEDGEHOG_SIGNALING_PATHWAY Genes involved in Hedgehog signaling pathway BMP2, BMP4, BMP5, BMP6, BMP7, BMP8A, BMP8B, BTRC, CSNK1A1, CSNK1A1L, CSNK1D, CSNK1E, CSNK1G1, CSNK1G2, CSNK1G3, DHH, FBXW11, GAS1, GLI1, GLI2, GLI3, GSK3B, HHIP, IHH, LRP2, PRKACA, PRKACB, PRKACG, PRKX, PRKY, PTCH1, PTCH2, RAB23, SHH, SMO, STK36, SUFU, WNT1, WNT10A, WNT10B, WNT11, WNT16, WNT2, WNT2B, WNT3, WNT3A, WNT4, WNT5A, WNT5B, WNT6, WNT7A, WNT7B, WNT8A, WNT8B, WNT9A, WNT9B, ZIC2 56 BMP4(1), BMP5(8), BTRC(1), CSNK1A1(2), CSNK1A1L(5), CSNK1D(2), CSNK1G1(2), CSNK1G2(1), DHH(1), FBXW11(1), GLI1(3), GLI2(6), GLI3(9), HHIP(3), IHH(1), LRP2(41), PRKACB(3), PRKACG(1), PRKX(1), PTCH1(4), PTCH2(5), SHH(2), SMO(1), STK36(5), SUFU(2), WNT1(1), WNT10A(1), WNT10B(4), WNT11(1), WNT2(3), WNT2B(3), WNT3(2), WNT3A(2), WNT5A(1), WNT6(2), WNT7A(3), WNT7B(1), WNT8A(2), WNT9A(1), WNT9B(1), ZIC2(1) 16356064 140 85 139 57 34 50 16 24 16 0 0.89 1.00 1.00 293 HSA04115_P53_SIGNALING_PATHWAY Genes involved in p53 signaling pathway APAF1, ATM, ATR, BAI1, BAX, BBC3, BID, CASP3, CASP8, CASP9, CCNB1, CCNB2, CCNB3, CCND1, CCND2, CCND3, CCNE1, CCNE2, CCNG1, CCNG2, CD82, CDC2, CDK2, CDK4, CDK6, CDKN1A, CDKN2A, CHEK1, CHEK2, CYCS, DDB2, EI24, FAS, GADD45A, GADD45B, GADD45G, GTSE1, IGF1, IGFBP3, LRDD, MDM2, MDM4, P53AIP1, PERP, PMAIP1, PPM1D, PTEN, RCHY1, RFWD2, RPRM, RRM2, RRM2B, SCOTIN, SERPINB5, SERPINE1, SESN1, SESN2, SESN3, SFN, SIAH1, STEAP3, THBS1, TNFRSF10B, TP53, TP53I3, TP73, TSC2, ZMAT3 61 APAF1(4), ATM(8), ATR(13), BAI1(11), BAX(1), CASP8(2), CASP9(3), CCNB1(2), CCNB2(1), CCNB3(11), CCND1(1), CCND2(3), CCND3(1), CCNE1(3), CCNE2(2), CCNG1(1), CD82(1), CDKN1A(2), CHEK1(5), CHEK2(3), DDB2(3), EI24(1), FAS(1), GADD45A(1), GADD45B(1), GADD45G(1), GTSE1(4), IGF1(3), IGFBP3(2), LRDD(1), MDM2(2), PPM1D(1), RFWD2(5), RRM2(1), RRM2B(3), SERPINB5(2), SESN1(3), SESN2(2), SESN3(3), SFN(2), SIAH1(1), STEAP3(2), THBS1(1), TNFRSF10B(1), TSC2(5) 16949872 130 84 129 26 43 41 12 18 16 0 0.040 1.00 1.00 294 HSA00380_TRYPTOPHAN_METABOLISM Genes involved in tryptophan metabolism AADAT, AANAT, ABP1, ACAT1, ACAT2, ACMSD, AFMID, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, AOC2, AOC3, AOX1, ASMT, CARM1, CAT, CYP1A1, CYP1A2, CYP1B1, DDC, ECHS1, EHHADH, GCDH, HAAO, HADH, HADHA, HEMK1, HSD17B10, HSD17B4, INDO, INDOL1, INMT, KMO, KYNU, LCMT1, LCMT2, LNX1, MAOA, MAOB, METTL2B, METTL6, NFX1, OGDH, OGDHL, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, TDO2, TPH1, TPH2, WARS, WARS2, WBSCR22 58 AADAT(1), ABP1(5), ACAT1(2), ACMSD(1), AFMID(1), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH7A1(1), ALDH9A1(2), AOC2(2), AOC3(3), AOX1(13), ASMT(1), CARM1(1), CYP1A1(7), CYP1A2(1), CYP1B1(1), DDC(4), ECHS1(1), EHHADH(1), GCDH(2), HADH(1), HADHA(2), HSD17B4(1), INMT(3), KMO(3), KYNU(3), LCMT1(2), LCMT2(2), LNX1(2), METTL2B(1), METTL6(2), NFX1(2), OGDH(3), OGDHL(6), PRMT2(2), PRMT3(3), PRMT5(2), PRMT6(2), PRMT7(6), PRMT8(3), TDO2(2), TPH1(2), TPH2(6), WARS(4), WARS2(2), WBSCR22(3) 16226836 126 83 126 44 27 44 6 33 16 0 0.69 1.00 1.00 295 HSA05130_PATHOGENIC_ESCHERICHIA_COLI_INFECTION_EHEC Genes involved in pathogenic Escherichia coli infection - EHEC ABL1, ACTB, ACTG1, ARHGEF2, ARPC5, ARPC5L, CD14, CDC42, CDH1, CLDN1, CTNNB1, CTTN, EZR, FYN, HCLS1, ITGB1, KRT18, LOC643224, LOC654264, LY96, NCK1, NCK2, NCL, OCLN, PRKCA, RHOA, ROCK1, ROCK2, TLR4, TLR5, TUBA1A, TUBA1B, TUBA1C, TUBA3C, TUBA3D, TUBA3E, TUBA4A, TUBA8, TUBAL3, TUBB, TUBB1, TUBB2A, TUBB2B, TUBB2C, TUBB3, TUBB4, TUBB4Q, TUBB6, TUBB8, WAS, WASL, YWHAQ, YWHAZ 51 ABL1(3), ACTB(1), ACTG1(2), ARHGEF2(7), CD14(2), CDC42(1), CDH1(3), CLDN1(2), CTNNB1(4), CTTN(5), FYN(5), HCLS1(3), ITGB1(5), KRT18(2), NCK1(2), NCK2(1), NCL(1), PRKCA(5), ROCK1(5), ROCK2(3), TLR4(10), TLR5(2), TUBA1A(1), TUBA1B(1), TUBA1C(2), TUBA3C(7), TUBA3D(2), TUBA3E(5), TUBA4A(1), TUBA8(1), TUBAL3(3), TUBB(1), TUBB1(1), TUBB2A(2), TUBB3(2), TUBB4(4), TUBB4Q(2), TUBB8(1), WAS(4), WASL(2), YWHAQ(1) 14019102 117 83 116 28 35 37 11 17 17 0 0.11 1.00 1.00 296 HSA05131_PATHOGENIC_ESCHERICHIA_COLI_INFECTION_EPEC Genes involved in pathogenic Escherichia coli infection - EPEC ABL1, ACTB, ACTG1, ARHGEF2, ARPC5, ARPC5L, CD14, CDC42, CDH1, CLDN1, CTNNB1, CTTN, EZR, FYN, HCLS1, ITGB1, KRT18, LOC643224, LOC654264, LY96, NCK1, NCK2, NCL, OCLN, PRKCA, RHOA, ROCK1, ROCK2, TLR4, TLR5, TUBA1A, TUBA1B, TUBA1C, TUBA3C, TUBA3D, TUBA3E, TUBA4A, TUBA8, TUBAL3, TUBB, TUBB1, TUBB2A, TUBB2B, TUBB2C, TUBB3, TUBB4, TUBB4Q, TUBB6, TUBB8, WAS, WASL, YWHAQ, YWHAZ 51 ABL1(3), ACTB(1), ACTG1(2), ARHGEF2(7), CD14(2), CDC42(1), CDH1(3), CLDN1(2), CTNNB1(4), CTTN(5), FYN(5), HCLS1(3), ITGB1(5), KRT18(2), NCK1(2), NCK2(1), NCL(1), PRKCA(5), ROCK1(5), ROCK2(3), TLR4(10), TLR5(2), TUBA1A(1), TUBA1B(1), TUBA1C(2), TUBA3C(7), TUBA3D(2), TUBA3E(5), TUBA4A(1), TUBA8(1), TUBAL3(3), TUBB(1), TUBB1(1), TUBB2A(2), TUBB3(2), TUBB4(4), TUBB4Q(2), TUBB8(1), WAS(4), WASL(2), YWHAQ(1) 14019102 117 83 116 28 35 37 11 17 17 0 0.11 1.00 1.00 297 HSA00980_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 Genes involved in metabolism of xenobiotics by cytochrome P450 ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, AKR1C1, AKR1C2, AKR1C3, AKR1C4, ALDH1A3, ALDH3A1, ALDH3B1, ALDH3B2, CYP1A1, CYP1A2, CYP1B1, CYP2B6, CYP2C18, CYP2C19, CYP2C8, CYP2C9, CYP2E1, CYP2F1, CYP2S1, CYP3A4, CYP3A43, CYP3A5, CYP3A7, DHDH, EPHX1, GSTA1, GSTA2, GSTA3, GSTA4, GSTA5, GSTK1, GSTM1, GSTM2, GSTM3, GSTM4, GSTM5, GSTO2, GSTP1, GSTT1, GSTT2, GSTZ1, MGST1, MGST2, MGST3, UGT1A1, UGT1A10, UGT1A3, UGT1A4, UGT1A5, UGT1A6, UGT1A7, UGT1A8, UGT1A9, UGT2A1, UGT2A3, UGT2B10, UGT2B11, UGT2B15, UGT2B17, UGT2B28, UGT2B4, UGT2B7 68 ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH5(1), ADH7(1), ADHFE1(2), AKR1C2(1), AKR1C3(1), AKR1C4(1), ALDH3A1(2), ALDH3B2(1), CYP1A1(7), CYP1A2(1), CYP1B1(1), CYP2B6(4), CYP2C18(2), CYP2C19(8), CYP2C8(2), CYP2C9(3), CYP2F1(3), CYP2S1(1), CYP3A4(1), CYP3A43(4), CYP3A7(1), GSTA1(3), GSTA2(2), GSTA4(1), GSTA5(2), GSTM3(1), GSTM4(3), GSTM5(3), GSTP1(1), GSTZ1(2), MGST1(2), UGT1A1(1), UGT1A10(2), UGT1A3(1), UGT1A4(1), UGT1A5(3), UGT1A6(1), UGT1A7(2), UGT1A8(4), UGT1A9(3), UGT2A1(3), UGT2A3(6), UGT2B10(3), UGT2B11(5), UGT2B15(3), UGT2B28(5), UGT2B4(8), UGT2B7(2) 15355170 127 82 127 39 30 44 11 32 10 0 0.49 1.00 1.00 298 INTRINSICPATHWAY The intrinsic prothrombin activation pathway is activated by traumatized blood vessels and induces clot formation. COL4A1, COL4A2, COL4A3, COL4A4, COL4A5, COL4A6, F10, F11, F12, F2, F2R, F5, F8, F9, FGA, FGB, FGG, KLKB1, KNG, PROC, PROS1, SERPINC1, SERPING1 22 COL4A1(9), COL4A2(10), COL4A3(9), COL4A4(11), COL4A5(2), COL4A6(8), F10(3), F11(3), F12(1), F2R(2), F5(19), F8(9), F9(7), FGA(5), FGB(4), FGG(2), KLKB1(7), PROS1(5), SERPINC1(7), SERPING1(3) 12027460 126 82 126 31 30 54 7 21 14 0 0.36 1.00 1.00 299 HSA00010_GLYCOLYSIS_AND_GLUCONEOGENESIS Genes involved in glycolysis and gluconeogenesis ACSS1, ACSS2, ACYP1, ACYP2, ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, AKR1A1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH3B1, ALDH3B2, ALDH7A1, ALDH9A1, ALDOA, ALDOB, ALDOC, BPGM, DLAT, DLD, ENO1, ENO2, ENO3, FBP1, FBP2, G6PC, G6PC2, GALM, GAPDH, GAPDHS, GCK, GPI, HK1, HK2, HK3, LDHA, LDHAL6A, LDHAL6B, LDHB, LDHC, PDHA1, PDHA2, PDHB, PFKL, PFKM, PFKP, PGAM1, PGAM2, PGAM4, PGK1, PGK2, PGM1, PGM3, PKLR, PKM2, TPI1 64 ACSS1(3), ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH5(1), ADH7(1), ADHFE1(2), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH3B2(1), ALDH7A1(1), ALDH9A1(2), ALDOA(1), ALDOB(2), BPGM(1), DLAT(1), DLD(2), ENO2(1), ENO3(1), FBP2(1), G6PC(3), G6PC2(3), GAPDH(2), GAPDHS(1), GCK(5), GPI(5), HK1(3), HK2(5), HK3(5), LDHAL6A(2), LDHAL6B(1), LDHB(3), LDHC(3), PDHA1(3), PDHA2(8), PFKL(2), PFKM(5), PFKP(2), PGAM2(1), PGAM4(1), PGK1(2), PGK2(4), PGM1(1), PKLR(4), PKM2(3), TPI1(3) 15599030 113 81 113 49 29 44 8 19 13 0 0.93 1.00 1.00 300 SIG_CHEMOTAXIS Genes related to chemotaxis ACTR2, ACTR3, AKT1, AKT2, AKT3, ANGPTL2, ARHGAP1, ARHGAP4, ARHGEF11, BTK, CDC42, CFL1, CFL2, GDI1, GDI2, INPPL1, ITPR1, ITPR2, ITPR3, LIMK1, MYLK, MYLK2, P101-PI3K, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PDK1, PIK3CA, PIK3CD, PIK3CG, PIK3R1, PITX2, PPP1R13B, PTEN, RACGAP1, RHO, ROCK1, ROCK2, RPS4X, SAG, WASF1, WASL 42 AKT1(1), AKT3(3), ARHGAP1(1), ARHGAP4(2), ARHGEF11(8), BTK(7), CDC42(1), CFL1(2), CFL2(1), GDI1(2), GDI2(2), INPPL1(4), ITPR1(6), ITPR2(13), ITPR3(4), MYLK(8), MYLK2(3), PAK1(2), PAK2(1), PAK3(1), PAK4(1), PAK7(6), PDK1(1), PIK3CD(4), PIK3CG(17), PIK3R1(2), PITX2(3), PPP1R13B(5), RACGAP1(3), RHO(1), ROCK1(5), ROCK2(3), WASF1(1), WASL(2) 18055786 126 81 124 42 27 50 8 20 21 0 0.60 1.00 1.00 301 HSA00240_PYRIMIDINE_METABOLISM Genes involved in pyrimidine metabolism AICDA, AK3, CAD, CANT1, CDA, CMPK, CTPS, CTPS2, DCK, DCTD, DHODH, DPYD, DPYS, DTYMK, DUT, ECGF1, ENTPD1, ENTPD3, ENTPD4, ENTPD5, ENTPD6, ENTPD8, ITPA, NME1, NME2, NME4, NME6, NME7, NP, NT5C, NT5C1A, NT5C1B, NT5C2, NT5C3, NT5E, NT5M, NUDT2, PNPT1, POLA1, POLA2, POLD1, POLD2, POLD3, POLD4, POLE, POLE2, POLE3, POLE4, POLR1A, POLR1B, POLR1C, POLR1D, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLR3A, POLR3B, POLR3G, POLR3GL, POLR3H, POLR3K, PRIM1, PRIM2, RFC5, RRM1, RRM2, RRM2B, TK1, TK2, TXNRD1, TXNRD2, TYMS, UCK1, UCK2, UMPS, UPB1, UPP1, UPP2, UPRT, ZNRD1 85 AICDA(2), CAD(10), CANT1(1), CDA(1), CTPS(3), CTPS2(2), DCK(1), DCTD(1), DPYD(8), DPYS(6), DTYMK(1), ENTPD1(1), ENTPD3(1), ENTPD5(1), ENTPD6(4), ENTPD8(1), NME4(1), NME7(3), NT5C1A(2), NT5C1B(2), NT5C2(3), NT5C3(3), NT5E(2), PNPT1(2), POLA1(6), POLD1(2), POLD2(1), POLD3(1), POLE(7), POLE2(2), POLE4(1), POLR1A(3), POLR1B(2), POLR1D(1), POLR2A(2), POLR2B(6), POLR2D(1), POLR2E(2), POLR3A(1), POLR3B(2), POLR3G(1), POLR3H(2), PRIM1(3), RFC5(1), RRM1(1), RRM2(1), RRM2B(3), TXNRD1(2), TXNRD2(3), UMPS(2), UPP1(3), UPP2(1), UPRT(1) 21560962 126 79 125 53 38 44 6 17 21 0 0.97 1.00 1.00 302 HSA00350_TYROSINE_METABOLISM Genes involved in tyrosine metabolism ABP1, ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, ALDH1A3, ALDH3A1, ALDH3B1, ALDH3B2, AOC2, AOC3, AOX1, ARD1A, CARM1, COMT, DBH, DCT, DDC, ECH1, ESCO1, ESCO2, FAH, GOT1, GOT2, GSTZ1, HEMK1, HGD, HPD, LCMT1, LCMT2, LYCAT, MAOA, MAOB, METTL2B, METTL6, MIF, MYST3, MYST4, NAT5, NAT6, PNMT, PNPLA3, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, SH3GLB1, TAT, TH, TPO, TYR, TYRP1, WBSCR22 56 ABP1(5), ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH5(1), ADH7(1), ADHFE1(2), ALDH3A1(2), ALDH3B2(1), AOC2(2), AOC3(3), AOX1(13), CARM1(1), DBH(1), DCT(4), DDC(4), ECH1(1), ESCO1(2), ESCO2(1), FAH(1), GOT2(3), GSTZ1(2), HGD(4), HPD(1), LCMT1(2), LCMT2(2), METTL2B(1), METTL6(2), MYST3(11), MYST4(4), PNMT(2), PNPLA3(1), PRMT2(2), PRMT3(3), PRMT5(2), PRMT6(2), PRMT7(6), PRMT8(3), SH3GLB1(1), TAT(1), TH(1), TPO(10), TYR(10), TYRP1(2), WBSCR22(3) 15947020 132 79 132 40 31 52 5 27 17 0 0.37 1.00 1.00 303 HSA04150_MTOR_SIGNALING_PATHWAY Genes involved in mTOR signaling pathway AKT1, AKT2, AKT3, BRAF, CAB39, DDIT4, EIF4B, EIF4EBP1, FIGF, FRAP1, GBL, HIF1A, IGF1, INS, KIAA1303, LYK5, MAPK1, MAPK3, PDPK1, PGF, PIK3CA, PIK3CB, PIK3CD, PIK3CG, PIK3R1, PIK3R2, PIK3R3, PIK3R5, PRKAA1, PRKAA2, RHEB, RICTOR, RPS6, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA6, RPS6KB1, RPS6KB2, STK11, TSC1, TSC2, ULK1, ULK2, ULK3, VEGFA, VEGFB, VEGFC 43 AKT1(1), AKT3(3), BRAF(8), CAB39(1), DDIT4(2), EIF4B(5), FIGF(2), HIF1A(1), IGF1(3), MAPK1(1), MAPK3(1), PDPK1(1), PIK3CB(4), PIK3CD(4), PIK3CG(17), PIK3R1(2), PIK3R2(4), PIK3R3(2), PIK3R5(2), PRKAA2(5), RICTOR(3), RPS6(1), RPS6KA1(2), RPS6KA2(6), RPS6KA3(1), RPS6KA6(5), RPS6KB1(1), RPS6KB2(1), STK11(3), TSC1(5), TSC2(5), ULK1(4), ULK2(5), VEGFC(6) 13782896 117 79 116 30 34 37 11 13 22 0 0.24 1.00 1.00 304 TRYPTOPHAN_METABOLISM AANAT, ABP1, ACAT1, ACAT2, ACMSD, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, AOC2, AOC3, AOX1, ASMT, CAT, CYP19A1, CYP1A1, CYP1A2, CYP2A6, CYP2A6, CYP2A7, CYP2A7P1, CYP2A13, CYP2B6, CYP2C18, CYP2C19, CYP2C19, CYP2C9, CYP2C8, CYP2C9, CYP2D6, CYP2E1, CYP2F1, CYP2J2, CYP3A4, CYP3A5, CYP3A7, CYP4B1, CYP4F8, CYP51A1, DDC, ECHS1, EHHADH, GCDH, HAAO, HADHA, INDO, KMO, KYNU, MAOA, MAOB, SDS, TDO2, TPH1, WARS, WARS2 54 ABP1(5), ACAT1(2), ACMSD(1), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH9A1(2), AOC2(2), AOC3(3), AOX1(13), ASMT(1), CYP19A1(4), CYP1A1(7), CYP1A2(1), CYP2A13(1), CYP2A6(5), CYP2A7(1), CYP2B6(4), CYP2C18(2), CYP2C19(8), CYP2C8(2), CYP2C9(3), CYP2D6(3), CYP2F1(3), CYP2J2(1), CYP3A4(1), CYP3A7(1), CYP4B1(3), CYP4F8(3), DDC(4), ECHS1(1), EHHADH(1), GCDH(2), HADHA(2), KMO(3), KYNU(3), SDS(2), TDO2(2), TPH1(2), WARS(4), WARS2(2) 14782010 120 79 120 50 36 38 6 32 8 0 0.92 1.00 1.00 305 WNT_SIGNALING Wnt signaling genes APC, ARHA, AXIN1, C2orf31, CCND1, CCND2, CCND3, CSNK1E, CSNK1E, LOC400927, CTNNB1, DIPA, DVL1, DVL2, DVL3, FBXW2, FOSL1, FRAT1, FZD1, FZD10, FZD2, FZD3, FZD5, FZD6, FZD7, FZD8, FZD9, GSK3B, JUN, LDLR, MAPK10, MAPK9, MYC, PAFAH1B1, PLAU, PPP2R5C, PPP2R5E, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCI, PRKCM, PRKCQ, PRKCZ, PRKD1, RAC1, RHOA, SFRP4, TCF7, WNT1, WNT10A, WNT10B, WNT11, WNT16, WNT2, WNT2B, WNT3, WNT4, WNT5A, WNT5B, WNT6, WNT7A, WNT7B 58 APC(9), CCND1(1), CCND2(3), CCND3(1), CTNNB1(4), DVL1(3), DVL3(2), FOSL1(1), FZD1(1), FZD10(2), FZD2(1), FZD3(5), FZD6(3), FZD7(2), FZD8(1), FZD9(2), JUN(3), LDLR(4), MAPK10(1), MAPK9(1), MYC(1), PAFAH1B1(1), PLAU(2), PPP2R5C(6), PRKCA(5), PRKCD(2), PRKCE(3), PRKCG(9), PRKCI(5), PRKCQ(4), PRKCZ(1), PRKD1(11), RAC1(1), SFRP4(4), TCF7(1), WNT1(1), WNT10A(1), WNT10B(4), WNT11(1), WNT2(3), WNT2B(3), WNT3(2), WNT5A(1), WNT6(2), WNT7A(3), WNT7B(1) 16040470 128 79 127 38 41 53 8 18 8 0 0.28 1.00 1.00 306 HSA04330_NOTCH_SIGNALING_PATHWAY Genes involved in Notch signaling pathway ADAM17, APH1A, CIR, CREBBP, CTBP1, CTBP2, DLL1, DLL3, DLL4, DTX1, DTX2, DTX3, DTX3L, DTX4, DVL1, DVL2, DVL3, EP300, GCN5L2, HDAC1, HDAC2, HES1, JAG1, JAG2, LFNG, LOC652788, MAML1, MAML2, MAML3, MFNG, NCOR2, NCSTN, NOTCH1, NOTCH2, NOTCH3, NOTCH4, NUMB, NUMBL, PCAF, PSEN1, PSEN2, PSENEN, PTCRA, RBPJ, RBPJL, RFNG, SNW1 43 CREBBP(17), CTBP1(2), DLL1(1), DLL3(1), DLL4(1), DTX2(3), DTX3(2), DTX3L(3), DTX4(2), DVL1(3), DVL3(2), EP300(9), HDAC1(2), JAG1(1), JAG2(2), LFNG(1), MAML1(3), MAML2(5), MFNG(1), NCOR2(6), NCSTN(3), NOTCH1(16), NOTCH2(10), NOTCH3(7), NOTCH4(4), PSEN1(3), PSEN2(3), PSENEN(1), SNW1(2) 18674514 116 78 115 47 18 39 11 27 21 0 0.96 1.00 1.00 307 ST_G_ALPHA_I_PATHWAY Gi and Go proteins are members of the same family that transduce cellular signals through both their alpha and beta subunits. AKT1, AKT2, AKT3, ASAH1, BF, BRAF, DAG1, DRD2, EGFR, EPHB2, GRB2, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, KCNJ3, KCNJ5, KCNJ9, MAPK1, PI3, PIK3CB, PITX2, PLCB1, PLCB2, PLCB3, PLCB4, RAF1, RAP1GA1, RGS20, SHC1, SOS1, SOS2, SRC, STAT3, TERF2IP 33 AKT1(1), AKT3(3), BRAF(8), DAG1(2), DRD2(4), EGFR(7), EPHB2(5), ITPKA(1), ITPKB(6), ITPR1(6), ITPR2(13), ITPR3(4), KCNJ5(2), KCNJ9(3), MAPK1(1), PI3(1), PIK3CB(4), PITX2(3), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), RAF1(1), RGS20(1), SHC1(2), SOS1(11), SOS2(7), STAT3(2) 15465174 122 78 120 36 31 46 5 22 18 0 0.33 1.00 1.00 308 ST_T_CELL_SIGNAL_TRANSDUCTION On activation of the T cell receptor, phospholipase C is activated to produce second messengers DAG and PIP3, both required for T cell activation. CBL, CD28, CD3D, CSK, CTLA4, DAG1, DTYMK, EPHB2, FBXW7, GRAP2, GRB2, ITK, ITPKA, ITPKB, LAT, LCK, LCP2, MAPK1, NCK1, NFAT5, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, PAG, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PLCG1, PTPRC, RAF1, RASGRP1, RASGRP2, RASGRP3, RASGRP4, SOS1, SOS2, VAV1, ZAP70 44 CBL(3), CD3D(1), CTLA4(1), DAG1(2), DTYMK(1), EPHB2(5), FBXW7(11), ITK(2), ITPKA(1), ITPKB(6), LCK(3), LCP2(2), MAPK1(1), NCK1(2), NFAT5(3), NFKB1(2), NFKB2(2), NFKBIB(1), NFKBIE(1), NFKBIL1(2), NFKBIL2(4), PAK1(2), PAK2(1), PAK3(1), PAK4(1), PAK7(6), PLCG1(3), PTPRC(7), RAF1(1), RASGRP1(1), RASGRP2(1), RASGRP3(7), RASGRP4(5), SOS1(11), SOS2(7), VAV1(7), ZAP70(4) 15032812 121 78 118 42 33 36 12 23 17 0 0.82 1.00 1.00 309 GLYCEROLIPID_METABOLISM ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1, AGPAT1, AGPAT2, AGPAT3, AGPAT4, AKR1A1, AKR1B1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, CEL, DGAT1, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKQ, DGKZ, GK, GLA, GLB1, LCT, LIPC, LIPF, LIPG, LPL, PNLIP, PNLIPRP1, PNLIPRP2, PPAP2A, PPAP2B, PPAP2C 45 ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH7(1), ADHFE1(2), AGPAT3(1), AGPAT4(1), AKR1B1(1), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH9A1(2), CEL(1), DGAT1(1), DGKA(3), DGKB(5), DGKD(6), DGKE(4), DGKG(2), DGKQ(1), DGKZ(4), GK(4), GLA(2), LCT(18), LIPC(2), LIPF(1), LIPG(3), LPL(3), PNLIP(11), PNLIPRP1(3), PNLIPRP2(4), PPAP2B(2) 13026574 104 77 104 45 28 45 3 20 8 0 0.92 1.00 1.00 310 HSA00190_OXIDATIVE_PHOSPHORYLATION Genes involved in oxidative phosphorylation ATP12A, ATP4A, ATP4B, ATP5A1, ATP5B, ATP5C1, ATP5D, ATP5E, ATP5F1, ATP5G1, ATP5G2, ATP5G3, ATP5H, ATP5I, ATP5J, ATP5J2, ATP5L, ATP5O, ATP6, ATP6AP1, ATP6V0A1, ATP6V0A2, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0D1, ATP6V0D2, ATP6V0E1, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1E2, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H, ATP8, COX1, COX10, COX15, COX17, COX2, COX3, COX4I1, COX4I2, COX5A, COX5B, COX6A1, COX6A2, COX6B1, COX6B2, COX6C, COX7A1, COX7A2, COX7B, COX7B2, COX7C, COX8A, COX8C, CYC1, CYTB, LHPP, ND1, ND2, ND3, ND4, ND4L, ND5, ND6, NDUFA1, NDUFA10, NDUFA11, NDUFA12, NDUFA13, NDUFA2, NDUFA3, NDUFA4, NDUFA4L2, NDUFA5, NDUFA6, NDUFA7, NDUFA8, NDUFA9, NDUFAB1, NDUFB1, NDUFB10, NDUFB11, NDUFB2, NDUFB3, NDUFB4, NDUFB5, NDUFB6, NDUFB7, NDUFB8, NDUFB9, NDUFC1, NDUFC2, NDUFS1, NDUFS2, NDUFS3, NDUFS4, NDUFS5, NDUFS6, NDUFS7, NDUFS8, NDUFV1, NDUFV2, NDUFV3, PPA1, PPA2, SDHA, SDHB, SDHC, SDHD, TCIRG1, UCRC, UQCR, UQCRB, UQCRC1, UQCRC2, UQCRFS1, UQCRH, UQCRQ 113 ATP12A(7), ATP4A(6), ATP4B(2), ATP5A1(3), ATP5B(2), ATP5C1(3), ATP5G2(2), ATP5G3(1), ATP5L(1), ATP6V0A1(4), ATP6V0A2(5), ATP6V0A4(3), ATP6V0D1(2), ATP6V0D2(2), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(1), ATP6V1C1(1), ATP6V1C2(1), ATP6V1D(1), ATP6V1G2(1), ATP6V1G3(1), ATP6V1H(3), COX10(1), COX4I1(1), COX4I2(1), COX6B1(1), COX6C(1), COX7B2(3), CYC1(5), NDUFA10(3), NDUFA13(2), NDUFA7(1), NDUFA9(1), NDUFAB1(1), NDUFB1(1), NDUFB5(2), NDUFB6(1), NDUFB7(2), NDUFB8(2), NDUFB9(1), NDUFS1(4), NDUFS6(1), NDUFS8(1), NDUFV1(2), NDUFV2(2), PPA2(1), SDHA(3), SDHB(2), UQCRB(1), UQCRC2(1), UQCRFS1(2) 14918002 109 77 109 31 26 28 13 27 15 0 0.40 1.00 1.00 311 HSA00564_GLYCEROPHOSPHOLIPID_METABOLISM Genes involved in glycerophospholipid metabolism ACHE, AGPAT1, AGPAT2, AGPAT3, AGPAT4, AGPAT6, ARD1A, CDIPT, CDS1, CDS2, CHAT, CHKA, CHKB, CHPT1, CRLS1, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKI, DGKQ, DGKZ, ESCO1, ESCO2, ETNK1, ETNK2, GNPAT, GPAM, GPD1, GPD1L, GPD2, LCAT, LYCAT, LYPLA1, LYPLA2, LYPLA3, MYST3, MYST4, NAT5, NAT6, PCYT1A, PCYT1B, PEMT, PHOSPHO1, PISD, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLD1, PLD2, PNPLA3, PPAP2A, PPAP2B, PPAP2C, PTDSS1, PTDSS2, SH3GLB1 64 ACHE(3), AGPAT3(1), AGPAT4(1), AGPAT6(1), CDS1(2), CHAT(9), CHKA(4), CHPT1(1), CRLS1(1), DGKA(3), DGKB(5), DGKD(6), DGKE(4), DGKG(2), DGKI(13), DGKQ(1), DGKZ(4), ESCO1(2), ESCO2(1), ETNK1(3), GNPAT(2), GPAM(3), GPD1(1), GPD1L(1), GPD2(2), LYPLA1(3), MYST3(11), MYST4(4), PCYT1B(2), PISD(1), PLA2G2A(1), PLA2G2E(2), PLA2G2F(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5), PLD1(7), PLD2(2), PNPLA3(1), PPAP2B(2), PTDSS1(4), SH3GLB1(1) 17670772 136 77 136 53 36 52 9 22 17 0 0.89 1.00 1.00 312 NFATPATHWAY Cardiac hypertrophy is induced by NF-ATc4 and GATA4, which are stimulated through calcineurin activated by CaMK. ACTA1, AGT, AKT1, CALM1, CALM2, CALM3, CALR, CAMK1, CAMK1G, CAMK4, CREBBP, CSNK1A1, CTF1, DTR, EDN1, ELSPBP1, F2, FGF2, FKBP1A, GATA4, GSK3B, HAND1, HAND2, HRAS, IGF1, LIF, MAP2K1, MAPK1, MAPK14, MAPK3, MAPK8, MEF2C, MYH2, NFATC1, NFATC2, NFATC3, NFATC4, NKX2-5, NPPA, PIK3CA, PIK3R1, PPP3CA, PPP3CB, PPP3CC, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, RAF1, RPS6KB1, SYT1 50 ACTA1(3), AGT(1), AKT1(1), CALM2(1), CALR(1), CAMK1G(3), CAMK4(3), CREBBP(17), CSNK1A1(2), ELSPBP1(1), FGF2(2), HAND1(1), HAND2(2), HRAS(4), IGF1(3), MAP2K1(2), MAPK1(1), MAPK14(1), MAPK3(1), MAPK8(2), MEF2C(4), MYH2(31), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), NKX2-5(2), PIK3R1(2), PPP3CA(4), PPP3CB(4), PPP3CC(2), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), RAF1(1), RPS6KB1(1), SYT1(4) 12974242 132 77 132 43 37 52 9 20 14 0 0.62 1.00 1.00 313 STARCH_AND_SUCROSE_METABOLISM AGL, AMY1A, AMY1B, AMY1C, AMY2A, AMY2B, AMY2B, RNPC3, ENPP1, ENPP3, G6PC, GAA, GANAB, GBA3, GBE1, GCK, GPI, GUSB, GYS1, GYS2, HK1, HK2, HK3, MGAM, PGM1, PGM3, PYGB, PYGL, PYGM, SI, UCHL1, UCHL3, UGDH, UGT1A10, UGT1A10, UGT1A8, UGT1A7, UGT1A6, UGT1A5, UGT1A9, UGT1A4, UGT1A1, UGT1A3, UGT1A6, UGT1A8, UGT1A9, UGT2B15, UGT2B4, UXS1 37 AGL(6), AMY2B(7), ENPP1(8), ENPP3(6), G6PC(3), GANAB(5), GBE1(2), GCK(5), GPI(5), GUSB(2), GYS1(1), GYS2(4), HK1(3), HK2(5), HK3(5), MGAM(5), PGM1(1), PYGB(4), PYGM(6), UCHL3(1), UGDH(2), UGT1A1(1), UGT1A10(2), UGT1A3(1), UGT1A4(1), UGT1A5(3), UGT1A6(1), UGT1A7(2), UGT1A8(4), UGT1A9(3), UGT2B15(3), UGT2B4(8) 13524440 115 77 115 35 23 49 7 23 13 0 0.42 1.00 1.00 314 HIVNEFPATHWAY HIV-infected CD4 helper T cells may express Fas ligand, which binds to the Fas receptors of uninfected cells and induces apoptosis. ACTG1, ADPRT, APAF1, ARHGDIB, BAG4, BCL2, BID, BIRC2, BIRC3, BIRC4, CASP2, CASP3, CASP6, CASP7, CASP8, CASP9, CDC2L1, CDC2L2, CFLAR, CHUK, CRADD, CYCS, DAXX, DFFA, DFFB, FADD, GSN, LMNA, LMNB1, LMNB2, MAP2K7, MAP3K1, MAP3K14, MAP3K5, MAPK8, MDM2, NFKB1, NFKBIA, NUMA1, PAK2, PRKCD, PRKDC, PSEN1, PSEN2, PTK2, RASA1, RB1, RELA, RIPK1, SPTAN1, TNF, TNFRSF1A, TNFRSF1B, TNFRSF6, TNFSF6, TRADD, TRAF1, TRAF2 51 ACTG1(2), APAF1(4), ARHGDIB(2), BAG4(1), BIRC2(1), BIRC3(3), CASP2(1), CASP7(2), CASP8(2), CASP9(3), CFLAR(1), CHUK(2), CRADD(1), DAXX(3), DFFB(2), FADD(1), GSN(2), LMNA(1), MAP2K7(1), MAP3K1(3), MAP3K14(1), MAP3K5(4), MAPK8(2), MDM2(2), NFKB1(2), NUMA1(5), PAK2(1), PRKCD(2), PRKDC(12), PSEN1(3), PSEN2(3), PTK2(6), RASA1(8), RELA(3), SPTAN1(4), TNF(1), TNFRSF1A(2), TNFRSF1B(1), TRADD(1), TRAF1(4) 18246602 105 76 104 34 27 33 4 19 22 0 0.65 1.00 1.00 315 HSA04742_TASTE_TRANSDUCTION Genes involved in taste transduction ACCN1, ADCY4, ADCY6, ADCY8, CACNA1A, CACNA1B, GNAS, GNAT3, GNB1, GNB3, GNG13, GNG3, GRM4, ITPR3, KCNB1, PDE1A, PLCB2, PRKACA, PRKACB, PRKACG, PRKX, PRKY, SCNN1A, SCNN1B, SCNN1G, TAS1R1, TAS1R2, TAS1R3, TAS2R1, TAS2R10, TAS2R13, TAS2R14, TAS2R16, TAS2R3, TAS2R38, TAS2R39, TAS2R4, TAS2R40, TAS2R41, TAS2R42, TAS2R43, TAS2R44, TAS2R45, TAS2R46, TAS2R48, TAS2R49, TAS2R5, TAS2R50, TAS2R60, TAS2R7, TAS2R8, TAS2R9, TRPM5 48 ACCN1(6), ADCY4(4), ADCY6(2), ADCY8(18), CACNA1A(10), CACNA1B(10), GNAS(6), GNAT3(1), GNB1(1), GNB3(2), GRM4(3), ITPR3(4), KCNB1(1), PDE1A(2), PLCB2(5), PRKACB(3), PRKACG(1), PRKX(1), SCNN1A(1), SCNN1B(1), SCNN1G(3), TAS1R1(3), TAS1R3(3), TAS2R1(4), TAS2R10(3), TAS2R16(4), TAS2R3(2), TAS2R38(2), TAS2R39(1), TAS2R4(1), TAS2R40(3), TAS2R41(5), TAS2R42(2), TAS2R5(1), TAS2R60(8), TAS2R7(1), TAS2R8(1), TAS2R9(3), TRPM5(1) 15389346 133 76 133 53 37 43 8 34 11 0 0.81 1.00 1.00 316 RIBOSOMAL_PROTEINS ANK2, APG10L, RPS23, B3GALT4, CDR1, DGKI, FAU, IL6ST, KIAA1394, LOC133957, MRPL19, NET_5, PIGK, RPL10, RPL11, RPL12, RPL13, RPL13, LOC388344, RPL13A, RPL13A, LOC283340, LOC387930, RPL14, RPL14, RPL14L, RPL15, RPL15, LOC136321, LOC402694, RPL17, RPL17, dJ612B15.1, RPL18, RPL18A, LOC285053, LOC347544, LOC390354, RPL18A, LOC390354, RPL19, RPL21, RPL21, LOC387753, LOC388143, LOC388532, LOC388621, LOC389156, LOC390488, LOC402336, LOC440487, LOC440575, RPL21, LOC387753, LOC388143, LOC388532, LOC388621, LOC389156, LOC390488, LOC440487, LOC440575, RPL22, RPL23, RPL24, RPL24, SLC36A2, RPL26, LOC391126, LOC392501, LOC400055, LOC441073, LOC441533, RPL27, RPL27A, RPL27A, LOC389435, RPL28, RPL29, RPL29, LOC283412, LOC284064, LOC389655, LOC391738, LOC401911, RPL3, RPL30, RPL31, RPL32, RPL34, LOC342994, RPL35, RPL35A, RPL36, RPL37, RPL38, RPL39, RPL3L, RPL4, RPL41, RPL5, RPL5, LOC388907, RPL5, RNU66, LOC388907, RPL6, RPL7, RPL7, LOC389305, RPL7, LOC90193, LOC388401, LOC389305, LOC392550, LOC439954, RPL7A, RPL7A, LOC133748, LOC388474, RPL7A, RNU36B, LOC133748, LOC388474, RPL8, RPL9, RPLP0, RPLP0, RPLP0_like, RPLP1, RPLP2, RPS10, RPS10, LOC158104, LOC388885, LOC389127, LOC390842, LOC401817, RPS10, LOC388885, RPS11, RPS12, RPS13, RPS14, RPS15, RPS16, RPS16, LOC441876, RPS17, RPS17, LOC402057, RPS18, RPS19, RPS2, RPS2, LOC91561, LOC148430, LOC286444, LOC400963, LOC440589, RPS20, RPS21, RPS23, RPS24, RPS25, RPS26, RPS26L, LOC440440, RPS27, RPS27A, RPS27A, LOC388720, LOC389425, RPS28, RPS29, RPS3, RPS3A, RPS3A, LOC146053, LOC400652, LOC401016, LOC439992, RPS4X, RPS4Y1, RPS5, RPS6, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KA6, RPS6KB1, RPS6KB2, RPS7, RPS8, RPS9, RPSA, LOC388524, LOC388654, SCDR10, TBC1D10C, TSPAN9, UBA52, UBB, UBC 93 ANK2(26), B3GALT4(1), CDR1(4), DGKI(13), IL6ST(1), MRPL19(1), PIGK(1), RPL13(1), RPL14(1), RPL19(1), RPL32(1), RPL37(1), RPL3L(2), RPL4(1), RPL5(2), RPL7(1), RPL7A(1), RPL8(2), RPLP0(2), RPS11(1), RPS12(1), RPS18(1), RPS19(1), RPS2(1), RPS20(1), RPS21(1), RPS26(1), RPS6(1), RPS6KA1(2), RPS6KA2(6), RPS6KA3(1), RPS6KA6(5), RPS6KB1(1), RPS6KB2(1), RPS8(1), SLC36A2(2), TBC1D10C(3), TSPAN9(1), UBB(2), UBC(1) 14202086 98 76 98 40 28 28 8 26 8 0 0.93 1.00 1.00 317 SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES Genes related to regulation of the actin cytoskeleton ACTG1, ACTG2, ACTR2, ACTR3, AKT1, ANGPTL2, CDC42, CFL1, CFL2, FLNA, FLNC, FSCN1, FSCN2, FSCN3, GDI1, GDI2, LIMK1, MYH2, MYLK, MYLK2, PAK1, PAK2, PAK3, PAK4, PAK6, PAK7, PFN1, PFN2, RHO, ROCK1, ROCK2, RPS4X, VASP, WASF1, WASL 35 ACTG1(2), ACTG2(6), AKT1(1), CDC42(1), CFL1(2), CFL2(1), FLNA(14), FLNC(16), FSCN2(1), FSCN3(2), GDI1(2), GDI2(2), MYH2(31), MYLK(8), MYLK2(3), PAK1(2), PAK2(1), PAK3(1), PAK4(1), PAK7(6), PFN2(1), RHO(1), ROCK1(5), ROCK2(3), VASP(2), WASF1(1), WASL(2) 12829706 118 76 118 41 30 51 7 17 13 0 0.61 1.00 1.00 318 BLOOD_CLOTTING_CASCADE F10, F11, F12, F13B, F2, F5, F7, F8, F8A1, F9, FGA, FGB, FGG, LPA, PLG, PLAT, PLAU, PLG, SERPINB2, SERPINE1, SERPINF2, VWF 20 F10(3), F11(3), F12(1), F13B(12), F5(19), F7(2), F8(9), F9(7), FGA(5), FGB(4), FGG(2), LPA(15), PLAT(1), PLAU(2), PLG(2), SERPINB2(4), SERPINF2(3), VWF(17) 9400892 111 75 111 24 34 40 8 18 11 0 0.081 1.00 1.00 319 HSA05120_EPITHELIAL_CELL_SIGNALING_IN_HELICOBACTER_PYLORI_INFECTION Genes involved in epithelial cell signaling in Helicobacter pylori infection ADAM10, ADAM17, ATP6AP1, ATP6V0A1, ATP6V0A2, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0D1, ATP6V0D2, ATP6V0E1, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1E2, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H, CASP3, CCL5, CDC42, CHUK, CSK, CXCL1, EGFR, F11R, GIT1, HBEGF, IGSF5, IKBKB, IKBKG, IL8, IL8RA, IL8RB, JAM2, JAM3, JUN, LYN, MAP2K4, MAP3K14, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK8, MAPK9, MET, NFKB1, NFKB2, NFKBIA, NOD1, PAK1, PLCG1, PLCG2, PTPN11, PTPRZ1, RAC1, RELA, SRC, TCIRG1, TJP1 65 ADAM10(4), ATP6V0A1(4), ATP6V0A2(5), ATP6V0A4(3), ATP6V0D1(2), ATP6V0D2(2), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(1), ATP6V1C1(1), ATP6V1C2(1), ATP6V1D(1), ATP6V1G2(1), ATP6V1G3(1), ATP6V1H(3), CDC42(1), CHUK(2), EGFR(7), F11R(1), GIT1(1), HBEGF(1), IGSF5(2), IKBKB(2), JAM2(2), JUN(3), LYN(2), MAP2K4(1), MAP3K14(1), MAPK10(1), MAPK11(2), MAPK13(2), MAPK14(1), MAPK8(2), MAPK9(1), MET(4), NFKB1(2), NFKB2(2), NOD1(4), PAK1(2), PLCG1(3), PLCG2(4), PTPN11(3), PTPRZ1(9), RAC1(1), RELA(3), TJP1(9) 18745358 117 75 115 30 30 33 7 24 23 0 0.22 1.00 1.00 320 INOSITOL_PHOSPHATE_METABOLISM IMPA1, INPP1, INPP4A, INPP4B, INPP5A, INPPL1, ITPKA, ITPKB, MIOX, OCRL, PIK3C2A, PIK3C2B, PIK3C2G, PIK3CA, PIK3CB, PIK3CG, PIK4CA, PIK4CA, LOC220686, PIP5K2B, PLCB1, PLCB2, PLCB3, PLCB4, PLCD1, PLCG1, PLCG2 22 IMPA1(2), INPP1(1), INPP4A(5), INPP4B(6), INPP5A(4), INPPL1(4), ITPKA(1), ITPKB(6), MIOX(1), OCRL(8), PIK3C2A(6), PIK3C2B(6), PIK3C2G(8), PIK3CB(4), PIK3CG(17), PLCB1(8), PLCB2(5), PLCB3(4), PLCB4(7), PLCD1(1), PLCG1(3), PLCG2(4) 11475304 111 73 111 35 30 39 8 16 18 0 0.50 1.00 1.00 321 SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES Genes related to PIP3 signaling in B lymphocytes AKT1, AKT2, AKT3, BCR, BTK, CD19, CDKN2A, DAPP1, FLOT1, FLOT2, FOXO3A, GAB1, ITPR1, ITPR2, ITPR3, LYN, NR0B2, P101-PI3K, PDK1, PHF11, PIK3CA, PITX2, PLCG2, PPP1R13B, PREX1, PSCD3, PTEN, PTPRC, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KB1, SAG, SYK, TEC, VAV1 30 AKT1(1), AKT3(3), BCR(2), BTK(7), CD19(2), FLOT1(1), FLOT2(1), GAB1(2), ITPR1(6), ITPR2(13), ITPR3(4), LYN(2), NR0B2(1), PDK1(1), PHF11(1), PITX2(3), PLCG2(4), PPP1R13B(5), PREX1(14), PTPRC(7), RPS6KA1(2), RPS6KA2(6), RPS6KA3(1), RPS6KB1(1), SYK(1), TEC(4), VAV1(7) 13976026 102 73 101 37 34 32 6 16 14 0 0.78 1.00 1.00 322 ST_ADRENERGIC Adrenergic receptors respond to epinephrine and norepinephrine signaling. AKT1, APC, AR, ASAH1, BF, BRAF, CAMP, CCL13, CCL15, CCL16, DAG1, EGFR, GAS, GNA11, GNA15, GNAI1, GNAQ, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, KCNJ3, KCNJ5, KCNJ9, MAPK1, MAPK10, MAPK14, PHKA2, PIK3CA, PIK3CD, PIK3R1, PITX2, PTX1, PTX3, RAF1, SRC 32 AKT1(1), APC(9), AR(6), BRAF(8), CCL16(1), DAG1(2), EGFR(7), GNA11(1), GNA15(1), GNAI1(3), ITPKA(1), ITPKB(6), ITPR1(6), ITPR2(13), ITPR3(4), KCNJ5(2), KCNJ9(3), MAPK1(1), MAPK10(1), MAPK14(1), PHKA2(4), PIK3CD(4), PIK3R1(2), PITX2(3), PTX3(2), RAF1(1) 13522482 93 73 91 25 24 37 5 17 10 0 0.21 1.00 1.00 323 ST_B_CELL_ANTIGEN_RECEPTOR B cell receptors bind antigens and promote B cell activation. AKT1, AKT2, AKT3, BAD, BCR, BLNK, BTK, CD19, CSK, DAG1, EPHB2, GRB2, ITPKA, ITPKB, LYN, MAP2K1, MAP2K2, MAPK1, NFAT5, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, PAG, PI3, PIK3CA, PIK3CD, PIK3R1, PLCG2, PPP1R13B, RAF1, SERPINA4, SHC1, SOS1, SOS2, SYK, VAV1 38 AKT1(1), AKT3(3), BCR(2), BLNK(1), BTK(7), CD19(2), DAG1(2), EPHB2(5), ITPKA(1), ITPKB(6), LYN(2), MAP2K1(2), MAP2K2(1), MAPK1(1), NFAT5(3), NFKB1(2), NFKB2(2), NFKBIB(1), NFKBIE(1), NFKBIL1(2), NFKBIL2(4), PI3(1), PIK3CD(4), PIK3R1(2), PLCG2(4), PPP1R13B(5), RAF1(1), SERPINA4(7), SHC1(2), SOS1(11), SOS2(7), SYK(1), VAV1(7) 13478160 103 73 103 38 30 34 7 18 14 0 0.82 1.00 1.00 324 ST_FAS_SIGNALING_PATHWAY The Fas receptor induces apoptosis and NF-kB activation when bound to Fas ligand. ADPRT, ALG2, BAK1, BAX, BFAR, BIRC4, BTK, CAD, CASP10, CASP3, CASP8, CASP8AP2, CD7, CDK2AP1, CSNK1A1, DAXX, DEDD, DEDD2, DFFA, DIABLO, EGFR, EPHB2, FADD, FAF1, FAIM2, FREQ, HRB, HSPB1, IL1A, IL8, MAP2K4, MAP2K7, MAP3K1, MAP3K5, MAPK1, MAPK10, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, MCP, MET, NFAT5, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, NR0B2, PFN1, PFN2, PTPN13, RALBP1, RIPK1, ROCK1, SMPD1, TNFRSF6, TNFRSF6B, TP53, TPX2, TRAF2, TUFM, VIL2 58 ALG2(3), BAK1(1), BAX(1), BTK(7), CAD(10), CASP10(3), CASP8(2), CASP8AP2(6), CD7(1), CDK2AP1(1), CSNK1A1(2), DAXX(3), EGFR(7), EPHB2(5), FADD(1), FAF1(1), FAIM2(1), IL1A(1), MAP2K4(1), MAP2K7(1), MAP3K1(3), MAP3K5(4), MAPK1(1), MAPK10(1), MAPK8(2), MAPK8IP1(2), MAPK8IP3(3), MAPK9(1), MET(4), NFAT5(3), NFKB1(2), NFKB2(2), NFKBIB(1), NFKBIE(1), NFKBIL1(2), NFKBIL2(4), NR0B2(1), PFN2(1), PTPN13(9), RALBP1(1), ROCK1(5), SMPD1(4), TNFRSF6B(1), TPX2(1), TUFM(1) 19475158 118 73 117 37 32 39 8 23 16 0 0.65 1.00 1.00 325 GLUCONEOGENESIS ACYP1, ACYP2, ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1, AKR1A1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH3B1, ALDH3B2, ALDH9A1, ALDOA, ALDOB, ALDOC, BPGM, DLAT, DLD, ENO1, ENO2, ENO3, FBP1, FBP2, G6PC, GAPDH, GCK, GPI, HK1, HK2, HK3, LDHA, LDHB, LDHC, PDHA1, PDHA2, PDHB, PFKM, PFKP, PGAM1, PGK1, PGM1, PGM3, PKLR, PKM2, TPI1 53 ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH7(1), ADHFE1(2), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH3B2(1), ALDH9A1(2), ALDOA(1), ALDOB(2), BPGM(1), DLAT(1), DLD(2), ENO2(1), ENO3(1), FBP2(1), G6PC(3), GAPDH(2), GCK(5), GPI(5), HK1(3), HK2(5), HK3(5), LDHB(3), LDHC(3), PDHA1(3), PDHA2(8), PFKM(5), PFKP(2), PGK1(2), PGM1(1), PKLR(4), PKM2(3), TPI1(3) 13074456 97 72 97 36 25 41 5 17 9 0 0.68 1.00 1.00 326 GLYCOLYSIS ACYP1, ACYP2, ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1, AKR1A1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH3B1, ALDH3B2, ALDH9A1, ALDOA, ALDOB, ALDOC, BPGM, DLAT, DLD, ENO1, ENO2, ENO3, FBP1, FBP2, G6PC, GAPDH, GCK, GPI, HK1, HK2, HK3, LDHA, LDHB, LDHC, PDHA1, PDHA2, PDHB, PFKM, PFKP, PGAM1, PGK1, PGM1, PGM3, PKLR, PKM2, TPI1 53 ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH7(1), ADHFE1(2), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH3B2(1), ALDH9A1(2), ALDOA(1), ALDOB(2), BPGM(1), DLAT(1), DLD(2), ENO2(1), ENO3(1), FBP2(1), G6PC(3), GAPDH(2), GCK(5), GPI(5), HK1(3), HK2(5), HK3(5), LDHB(3), LDHC(3), PDHA1(3), PDHA2(8), PFKM(5), PFKP(2), PGK1(2), PGM1(1), PKLR(4), PKM2(3), TPI1(3) 13074456 97 72 97 36 25 41 5 17 9 0 0.68 1.00 1.00 327 HSA00251_GLUTAMATE_METABOLISM Genes involved in glutamate metabolism ABAT, ADC, ALDH4A1, ALDH5A1, CAD, CPS1, EARS2, EPRS, GAD1, GAD2, GCLC, GCLM, GFPT1, GFPT2, GLS, GLS2, GLUD1, GLUD2, GLUL, GMPS, GNPNAT1, GOT1, GOT2, GPT, GPT2, GSR, GSS, NADSYN1, NAGK, PPAT, QARS 30 ABAT(3), ADC(1), ALDH4A1(3), ALDH5A1(1), CAD(10), EARS2(3), EPRS(12), GAD1(5), GAD2(6), GCLC(2), GCLM(1), GFPT1(1), GFPT2(3), GLS(4), GLS2(1), GLUD1(4), GLUD2(9), GLUL(4), GOT2(3), GPT(1), GPT2(4), GSR(4), GSS(2), NADSYN1(7), NAGK(2), PPAT(2) 9756892 98 72 98 27 26 40 5 18 9 0 0.27 1.00 1.00 328 HSA00970_AMINOACYL_TRNA_BIOSYNTHESIS Genes involved in aminoacyl-tRNA biosynthesis AARS, AARS2, CARS, CARS2, DARS, DARS2, EARS2, EPRS, FARS2, FARSA, FARSB, GARS, HARS, HARS2, IARS, IARS2, KARS, LARS, LARS2, MARS, MARS2, MTFMT, NARS, NARS2, PARS2, QARS, RARS, RARS2, SARS, SARS2, TARS, TARS2, VARS, VARS2, WARS, WARS2, YARS, YARS2 38 AARS(2), AARS2(5), CARS(8), CARS2(1), DARS(1), DARS2(5), EARS2(3), EPRS(12), FARS2(2), FARSA(5), HARS(2), HARS2(2), IARS(3), IARS2(3), KARS(2), LARS(1), LARS2(3), MARS(1), NARS(4), NARS2(2), PARS2(4), RARS(4), RARS2(2), SARS(2), SARS2(3), TARS(3), TARS2(4), VARS(4), VARS2(1), WARS(4), WARS2(2), YARS(1), YARS2(2) 14534946 103 72 103 27 40 30 5 16 12 0 0.24 1.00 1.00 329 HSA00310_LYSINE_DEGRADATION Genes involved in lysine degradation AADAT, AASDHPPT, AASS, ACAT1, ACAT2, AKR1B10, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, BBOX1, DLST, DOT1L, ECHS1, EHHADH, EHMT1, EHMT2, GCDH, HADH, HADHA, HSD17B10, HSD17B4, HSD3B7, NSD1, OGDH, OGDHL, PIPOX, PLOD1, PLOD2, PLOD3, RDH11, RDH12, RDH13, RDH14, SETD1A, SETD7, SETDB1, SHMT1, SHMT2, SPCS1, SPCS3, SUV39H1, SUV39H2, TMLHE 47 AADAT(1), AASDHPPT(1), AASS(11), ACAT1(2), AKR1B10(2), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH7A1(1), ALDH9A1(2), BBOX1(2), DLST(1), DOT1L(5), ECHS1(1), EHHADH(1), EHMT1(5), EHMT2(1), GCDH(2), HADH(1), HADHA(2), HSD17B4(1), NSD1(10), OGDH(3), OGDHL(6), PIPOX(1), PLOD1(4), PLOD2(5), PLOD3(5), RDH11(1), RDH12(2), RDH13(1), SETD1A(8), SETDB1(3), SPCS1(1), SPCS3(2), SUV39H1(2), SUV39H2(2), TMLHE(1) 15574644 105 71 105 42 20 36 7 24 18 0 0.90 1.00 1.00 330 GLYCEROPHOSPHOLIPID_METABOLISM ACHE, AGPAT1, AGPAT2, AGPAT3, AGPAT4, AGPS, CDIPT, CDS1, CDS2, CHAT, CHKA, CHKB, CHKB, CPT1B, CLC, DGKA, DGKB, DGKD, DGKE, DGKG, DGKH, DGKQ, DGKZ, ETNK1, GNPAT, GPD1, GPD2, LCAT, LGALS13, LYPLA1, LYPLA2, LYPLA2, LYPLA2P1, LOC388499, LYPLA3, PAFAH1B1, PAFAH2, PCYT1A, PCYT1B, PEMT, PISD, PLA2G1B, PLA2G2A, PLA2G2E, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLCB2, PLCG1, PLCG2, PPAP2A, PPAP2B, PPAP2C 49 ACHE(3), AGPAT3(1), AGPAT4(1), AGPS(1), CDS1(2), CHAT(9), CHKA(4), CPT1B(3), DGKA(3), DGKB(5), DGKD(6), DGKE(4), DGKG(2), DGKQ(1), DGKZ(4), ETNK1(3), GNPAT(2), GPD1(1), GPD2(2), LGALS13(1), LYPLA1(3), PAFAH1B1(1), PCYT1B(2), PISD(1), PLA2G2A(1), PLA2G2E(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5), PLCB2(5), PLCG1(3), PLCG2(4), PPAP2B(2) 13498274 99 70 99 36 29 37 9 15 9 0 0.69 1.00 1.00 331 PPARAPATHWAY Peroxisome proliferators regulate gene expression via PPAR/RXR heterodimers which bind to peroxisome-proliferator response elements (PPREs). ACOX1, APOA1, APOA2, CD36, CITED2, CPT1B, CREBBP, DUSP1, DUT, EHHADH, EP300, FABP1, FAT, FRA8B, HSD17B4, HSPA1A, HSPCA, INS, JUN, LPL, MAPK1, MAPK3, ME1, MRPL11, MYC, NCOA1, NCOR1, NCOR2, NFKBIA, NOS2A, NR0B2, NR1H3, NR2F1, NRIP1, PDGFA, PIK3CA, PIK3R1, PPARA, PPARBP, PPARGC1, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, PTGS2, RB1, RELA, RXRA, SP1, SRA1, STAT5A, STAT5B, TNF 48 ACOX1(2), APOA2(1), CD36(1), CITED2(1), CPT1B(3), CREBBP(17), EHHADH(1), EP300(9), FABP1(1), HSD17B4(1), JUN(3), LPL(3), MAPK1(1), MAPK3(1), ME1(2), MRPL11(1), MYC(1), NCOA1(6), NCOR1(8), NCOR2(6), NR0B2(1), NR1H3(2), NRIP1(3), PIK3R1(2), PPARA(1), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PRKCA(5), RELA(3), RXRA(2), SP1(2), STAT5A(2), TNF(1) 15827582 103 69 101 42 29 35 5 22 12 0 0.94 1.00 1.00 332 TCRPATHWAY T cell receptors bind to foreign peptides presented by MHC molecules and induce T cell activation. CALM1, CALM2, CALM3, CD3D, CD3E, CD3G, CD3Z, ELK1, FOS, FYN, GRB2, HRAS, JUN, LAT, LCK, MAP2K1, MAP2K4, MAP3K1, MAPK3, MAPK8, NFATC1, NFATC2, NFATC3, NFATC4, NFKB1, NFKBIA, PIK3CA, PIK3R1, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKCA, PRKCB1, PTPN7, RAC1, RAF1, RASA1, RELA, SHC1, SOS1, SYT1, TRA@, TRB@, VAV1, ZAP70 41 CALM2(1), CD3D(1), FOS(2), FYN(5), HRAS(4), JUN(3), LCK(3), MAP2K1(2), MAP2K4(1), MAP3K1(3), MAPK3(1), MAPK8(2), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), NFKB1(2), PIK3R1(2), PLCG1(3), PPP3CA(4), PPP3CB(4), PPP3CC(2), PRKCA(5), PTPN7(1), RAC1(1), RAF1(1), RASA1(8), RELA(3), SHC1(2), SOS1(11), SYT1(4), VAV1(7), ZAP70(4) 12165944 107 69 106 20 34 34 9 16 14 0 0.032 1.00 1.00 333 HSA00252_ALANINE_AND_ASPARTATE_METABOLISM Genes involved in alanine and aspartate metabolism AARS, AARS2, ABAT, ACY3, ADSL, ADSS, ADSSL1, AGXT, AGXT2, ASL, ASNS, ASPA, ASRGL1, ASS1, CAD, CRAT, DARS, DARS2, DDO, DLAT, DLD, GAD1, GAD2, GOT1, GOT2, GPT, GPT2, NARS, NARS2, PC, PDHA1, PDHA2, PDHB 33 AARS(2), AARS2(5), ABAT(3), ACY3(2), ADSL(1), ADSS(1), ADSSL1(2), AGXT(2), AGXT2(2), ASL(4), ASNS(5), CAD(10), DARS(1), DARS2(5), DDO(2), DLAT(1), DLD(2), GAD1(5), GAD2(6), GOT2(3), GPT(1), GPT2(4), NARS(4), NARS2(2), PC(2), PDHA1(3), PDHA2(8) 10139592 88 68 88 31 25 28 5 19 11 0 0.67 1.00 1.00 334 HSA00512_O_GLYCAN_BIOSYNTHESIS Genes involved in O-glycan biosynthesis B3GNT6, B4GALT5, C1GALT1, C1GALT1C1, GALNT1, GALNT10, GALNT11, GALNT12, GALNT13, GALNT14, GALNT17, GALNT2, GALNT3, GALNT4, GALNT5, GALNT6, GALNT7, GALNT8, GALNT9, GALNTL1, GALNTL2, GALNTL4, GALNTL5, GCNT1, GCNT3, GCNT4, OGT, ST3GAL1, ST3GAL2, ST6GALNAC1, WBSCR17 30 B3GNT6(1), B4GALT5(2), C1GALT1C1(1), GALNT1(2), GALNT10(2), GALNT11(2), GALNT12(3), GALNT13(13), GALNT14(5), GALNT2(2), GALNT3(3), GALNT5(7), GALNT6(2), GALNT8(3), GALNT9(1), GALNTL1(4), GALNTL4(4), GALNTL5(3), GCNT1(3), GCNT3(2), OGT(2), ST3GAL1(4), ST6GALNAC1(3), WBSCR17(11) 8621964 85 68 83 29 19 33 10 14 9 0 0.70 1.00 1.00 335 ARGININE_AND_PROLINE_METABOLISM ABP1, AGMAT, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH4A1, ALDH9A1, AMD1, AOC2, AOC3, ARG1, ARG2, ASL, ASS, CKB, CKM, CKMT1, CKMT1B, CKMT1A, CKMT2, CPS1, DAO, GAMT, GATM, GLUD1, GOT1, GOT2, MAOA, MAOB, NOS1, NOS2A, NOS3, OAT, ODC1, OTC, P4HA1, P4HA2, P4HA3, P4HB, PYCR1, RARS, SAT, SMS 42 ABP1(5), AGMAT(1), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH4A1(3), ALDH9A1(2), AMD1(1), AOC2(2), AOC3(3), ARG1(2), ASL(4), CKB(1), CKM(2), CKMT2(3), DAO(2), GATM(1), GLUD1(4), GOT2(3), NOS1(11), NOS3(2), OAT(1), ODC1(1), OTC(3), P4HA1(2), P4HA2(3), P4HA3(3), P4HB(4), PYCR1(1), RARS(4), SMS(2) 11042408 86 66 86 27 18 33 3 18 14 0 0.43 1.00 1.00 336 GLYCOLYSIS_AND_GLUCONEOGENESIS Genes involved in glycolysis and gluconeogenesis ALDOA, ALDOB, ALDOC, DLAT, DLD, ENO1, ENO2, ENO3, FBP1, FBP2, G6PC, GAPDH, GAPDHS, GAPDS, GCK, GOT1, GOT2, GPI, HK1, HK2, HK3, LDHA, LDHAL6B, LDHB, LDHC, MDH1, MDH2, PC, PCK1, PDHA1, PDHA2, PDHB, PDHX, PFKL, PFKM, PFKP, PGAM1, PGAM2, PGK1, PGK2, PKLR, PKM2, TNFAIP1, TPI1 43 ALDOA(1), ALDOB(2), DLAT(1), DLD(2), ENO2(1), ENO3(1), FBP2(1), G6PC(3), GAPDH(2), GAPDHS(1), GCK(5), GOT2(3), GPI(5), HK1(3), HK2(5), HK3(5), LDHAL6B(1), LDHB(3), LDHC(3), MDH1(1), MDH2(1), PC(2), PCK1(2), PDHA1(3), PDHA2(8), PDHX(1), PFKL(2), PFKM(5), PFKP(2), PGAM2(1), PGK1(2), PGK2(4), PKLR(4), PKM2(3), TPI1(3) 11368504 92 66 92 42 23 35 5 18 11 0 0.93 1.00 1.00 337 HSA00860_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM Genes involved in porphyrin and chlorophyll metabolism ALAD, ALAS1, ALAS2, BLVRA, BLVRB, COX10, COX15, CP, CPOX, EARS2, EPRS, FECH, FTH1, FTMT, GUSB, HCCS, HMBS, HMOX1, HMOX2, MMAB, PPOX, UGT1A1, UGT1A10, UGT1A3, UGT1A4, UGT1A5, UGT1A6, UGT1A7, UGT1A8, UGT1A9, UGT2A1, UGT2A3, UGT2B10, UGT2B11, UGT2B15, UGT2B17, UGT2B28, UGT2B4, UGT2B7, UROD, UROS 41 BLVRA(2), COX10(1), CP(2), CPOX(2), EARS2(3), EPRS(12), FECH(2), FTH1(2), FTMT(7), GUSB(2), HCCS(1), MMAB(1), PPOX(1), UGT1A1(1), UGT1A10(2), UGT1A3(1), UGT1A4(1), UGT1A5(3), UGT1A6(1), UGT1A7(2), UGT1A8(4), UGT1A9(3), UGT2A1(3), UGT2A3(6), UGT2B10(3), UGT2B11(5), UGT2B15(3), UGT2B28(5), UGT2B4(8), UGT2B7(2), UROD(1), UROS(1) 11379362 93 66 93 24 25 33 9 18 8 0 0.28 1.00 1.00 338 HSA04612_ANTIGEN_PROCESSING_AND_PRESENTATION Genes involved in antigen processing and presentation B2M, CALR, CANX, CD4, CD74, CD8A, CD8B, CIITA, CREB1, CTSB, CTSL1, CTSS, HLA-A, HLA-A29.1, HLA-B, HLA-C, HLA-DMA, HLA-DMB, HLA-DOA, HLA-DOB, HLA-DPA1, HLA-DPB1, HLA-DQA1, HLA-DQA2, HLA-DQB1, HLA-DQB2, HLA-DRA, HLA-DRB1, HLA-DRB3, HLA-DRB4, HLA-DRB5, HLA-E, HLA-F, HLA-G, HSP90AA1, HSP90AB1, HSPA5, IFI30, IFNA1, IFNA10, IFNA13, IFNA14, IFNA16, IFNA17, IFNA2, IFNA21, IFNA4, IFNA5, IFNA6, IFNA7, IFNA8, KIR2DL1, KIR2DL2, KIR2DL3, KIR2DL4, KIR2DL5A, KIR2DS1, KIR2DS2, KIR2DS3, KIR2DS4, KIR2DS5, KIR3DL1, KIR3DL2, KIR3DL3, KLRC1, KLRC2, KLRC3, KLRC4, KLRD1, LGMN, LTA, NFYA, NFYB, NFYC, PDIA3, PSME1, PSME2, RFX5, RFXANK, RFXAP, TAP1, TAP2, TAPBP 71 B2M(2), CALR(1), CANX(2), CD4(1), CD8A(2), CD8B(1), CIITA(3), CREB1(1), CTSL1(3), CTSS(2), HLA-B(1), HLA-C(1), HLA-DMA(1), HLA-DMB(1), HLA-DOA(1), HLA-DOB(1), HLA-DPA1(2), HLA-DQA2(1), HLA-DRA(1), HLA-DRB1(2), HLA-DRB5(2), HLA-G(2), HSP90AA1(3), HSP90AB1(3), HSPA5(4), IFNA1(1), IFNA14(2), IFNA16(2), IFNA17(1), IFNA4(1), IFNA6(1), IFNA7(1), IFNA8(2), KIR2DL1(2), KIR2DL3(4), KIR2DL4(1), KIR2DS4(5), KIR3DL1(6), KIR3DL2(1), KIR3DL3(1), KLRC1(1), KLRC3(2), KLRD1(1), LTA(2), NFYA(1), NFYB(1), PDIA3(1), PSME2(1), TAP1(3), TAP2(1), TAPBP(4) 12256546 93 66 92 41 29 28 8 16 12 0 0.94 1.00 1.00 339 KERATINOCYTEPATHWAY Keratinocyte differentiation, which models the differentiation of epidermal cells, requires the four main MAP kinase pathways. BCL2, CEBPA, CHUK, DAXX, EGF, EGFR, ETS1, ETS2, FOS, HOXA7, HRAS, IKBKB, JUN, MAP2K1, MAP2K3, MAP2K4, MAP2K6, MAP2K7, MAP3K1, MAP3K14, MAP3K5, MAPK1, MAPK13, MAPK14, MAPK3, MAPK8, NFKB1, NFKBIA, PPP2CA, PRKCA, PRKCB1, PRKCD, PRKCE, PRKCG, PRKCH, PRKCQ, RAF1, RELA, RIPK1, SP1, TNF, TNFRSF1A, TNFRSF1B, TNFRSF6, TNFSF6, TRAF2 42 CHUK(2), DAXX(3), EGF(6), EGFR(7), ETS1(2), FOS(2), HOXA7(2), HRAS(4), IKBKB(2), JUN(3), MAP2K1(2), MAP2K3(3), MAP2K4(1), MAP2K6(2), MAP2K7(1), MAP3K1(3), MAP3K14(1), MAP3K5(4), MAPK1(1), MAPK13(2), MAPK14(1), MAPK3(1), MAPK8(2), NFKB1(2), PRKCA(5), PRKCD(2), PRKCE(3), PRKCG(9), PRKCQ(4), RAF1(1), RELA(3), SP1(2), TNF(1), TNFRSF1A(2), TNFRSF1B(1) 13119490 92 66 90 25 28 35 6 13 10 0 0.26 1.00 1.00 340 ST_MYOCYTE_AD_PATHWAY Cardiac myocytes have a variety of adrenergic receptors that induce subtype-specific signaling effects. ADRB1, AKT1, APC, ASAH1, BF, CAMP, CAV3, DAG1, DLG4, EPHB2, GAS, GNAI1, GNAQ, HTATIP, ITPR1, ITPR2, ITPR3, KCNJ3, KCNJ5, KCNJ9, MAPK1, PITX2, PLB, PTX1, PTX3, RAC1, RHO, RYR1 22 ADRB1(1), AKT1(1), APC(9), CAV3(1), DAG1(2), DLG4(1), EPHB2(5), GNAI1(3), ITPR1(6), ITPR2(13), ITPR3(4), KCNJ5(2), KCNJ9(3), MAPK1(1), PITX2(3), PTX3(2), RAC1(1), RHO(1), RYR1(27) 12114324 86 66 85 27 18 33 5 17 13 0 0.36 1.00 1.00 341 FCER1PATHWAY In mast cells, Fc epsilon receptor 1 activates BTK, PKC, and the MAP kinase pathway to promote degranulation and arachnidonic acid release. BTK, CALM1, CALM2, CALM3, ELK1, FCER1A, FCER1G, FOS, GRB2, HRAS, JUN, LYN, MAP2K1, MAP2K4, MAP2K7, MAP3K1, MAPK1, MAPK3, MAPK8, NFATC1, NFATC2, NFATC3, NFATC4, PAK2, PIK3CA, PIK3R1, PLA2G4A, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKCB1, RAF1, SHC1, SOS1, SYK, SYT1, VAV1 36 BTK(7), CALM2(1), FCER1A(3), FCER1G(1), FOS(2), HRAS(4), JUN(3), LYN(2), MAP2K1(2), MAP2K4(1), MAP2K7(1), MAP3K1(3), MAPK1(1), MAPK3(1), MAPK8(2), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), PAK2(1), PIK3R1(2), PLA2G4A(7), PLCG1(3), PPP3CA(4), PPP3CB(4), PPP3CC(2), RAF1(1), SHC1(2), SOS1(11), SYK(1), SYT1(4), VAV1(7) 10898406 98 65 97 32 33 36 8 11 10 0 0.72 1.00 1.00 342 METPATHWAY The hepatocyte growth factor receptor c-Met stimulates proliferation and alters cell motility and adhesion on binding the ligand HGF. ACTA1, CRK, CRKL, DOCK1, ELK1, FOS, GAB1, GRB2, GRF2, HGF, HRAS, ITGA1, ITGB1, JUN, MAP2K1, MAP2K2, MAP4K1, MAPK1, MAPK3, MAPK8, MET, PAK1, PIK3CA, PIK3R1, PTEN, PTK2, PTK2B, PTPN11, PXN, RAF1, RAP1A, RAP1B, RASA1, SOS1, SRC, STAT3 33 ACTA1(3), CRKL(1), DOCK1(4), FOS(2), GAB1(2), HGF(10), HRAS(4), ITGA1(4), ITGB1(5), JUN(3), MAP2K1(2), MAP2K2(1), MAP4K1(3), MAPK1(1), MAPK3(1), MAPK8(2), MET(4), PAK1(2), PIK3R1(2), PTK2(6), PTPN11(3), PXN(3), RAF1(1), RAP1A(1), RAP1B(1), RASA1(8), SOS1(11), STAT3(2) 10981176 92 65 91 36 30 24 4 17 17 0 0.95 1.00 1.00 343 ST_DIFFERENTIATION_PATHWAY_IN_PC12_CELLS Rat-derived PC12 cells respond to nerve growth factor (NGF) and PACAP to differentiate into neuronal cells. AKT1, ASAH1, ATF1, BRAF, CAMP, CREB1, CREB3, CREB5, CREBBP, CRKL, DAG1, EGR1, EGR2, EGR3, EGR4, ELK1, FRS2, GAS, GNAQ, GRF2, JUN, MAP1B, MAP2K4, MAP2K7, MAPK1, MAPK10, MAPK3, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, NTRK1, OPN1LW, PACAP, PIK3C2G, PIK3CA, PIK3CD, PIK3R1, PTPN11, RPS6KA3, SH2B, SHC1, SRC, TERF2IP, TH, TUBA3 41 AKT1(1), BRAF(8), CREB1(1), CREB3(2), CREB5(3), CREBBP(17), CRKL(1), DAG1(2), EGR1(2), EGR2(6), EGR3(2), FRS2(4), JUN(3), MAP1B(4), MAP2K4(1), MAP2K7(1), MAPK1(1), MAPK10(1), MAPK3(1), MAPK8(2), MAPK8IP1(2), MAPK8IP3(3), MAPK9(1), NTRK1(4), OPN1LW(3), PIK3C2G(8), PIK3CD(4), PIK3R1(2), PTPN11(3), RPS6KA3(1), SHC1(2), TH(1) 13292328 97 65 96 38 30 38 7 13 9 0 0.86 1.00 1.00 344 NUCLEAR_RECEPTORS ALK, AR, ESR1, ESR2, ESRRA, HNF4A, NPM1, NR0B1, NR1D2, NR1H2, NR1H3, NR1I2, NR1I3, NR2C2, NR2E1, NR2F1, NR2F2, NR2F6, NR3C1, NR4A1, NR4A2, NR5A1, NR5A2, PGR, PPARA, PPARD, PPARG, RARA, RARB, RARG, ROR1, RORA, RORC, RXRA, RXRB, RXRG, THRA, THRA, NR1D1, THRB, VDR 40 ALK(5), AR(6), ESR1(6), ESR2(2), HNF4A(2), NR0B1(4), NR1D2(1), NR1H2(1), NR1H3(2), NR1I2(1), NR1I3(1), NR2C2(3), NR2E1(4), NR2F6(1), NR3C1(1), NR4A1(4), NR4A2(3), NR5A2(5), PGR(4), PPARA(1), PPARD(2), RARA(1), RARB(3), RARG(1), ROR1(3), RORA(2), RORC(2), RXRA(2), RXRG(7), THRA(1), THRB(2), VDR(4) 11215958 87 64 87 30 22 34 2 16 13 0 0.55 1.00 1.00 345 SIG_INSULIN_RECEPTOR_PATHWAY_IN_CARDIAC_MYOCYTES Genes related to the insulin receptor pathway AKT1, AKT2, AKT3, BRD4, CAP1, CBL, CDC42, CDKN2A, F2RL2, FLOT1, FLOT2, FOXO1A, GRB2, GSK3A, GSK3B, IGFBP1, INPPL1, IRS1, IRS2, IRS4, LNPEP, MAPK1, MAPK3, PARD3, PARD6A, PDK1, PIK3CA, PIK3CD, PIK3R1, PPYR1, PSCD3, PTEN, PTPN1, RAF1, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KB1, SERPINB6, SFN, SHC1, SLC2A4, SORBS1, SOS1, SOS2, YWHAB, YWHAE, YWHAG, YWHAH, YWHAQ, YWHAZ 46 AKT1(1), AKT3(3), BRD4(3), CAP1(2), CBL(3), CDC42(1), F2RL2(1), FLOT1(1), FLOT2(1), GSK3A(3), INPPL1(4), IRS1(6), IRS2(2), IRS4(2), LNPEP(2), MAPK1(1), MAPK3(1), PARD3(8), PARD6A(1), PDK1(1), PIK3CD(4), PIK3R1(2), PPYR1(4), PTPN1(1), RAF1(1), RPS6KA1(2), RPS6KA2(6), RPS6KA3(1), RPS6KB1(1), SERPINB6(4), SFN(2), SHC1(2), SLC2A4(2), SORBS1(5), SOS1(11), SOS2(7), YWHAB(1), YWHAQ(1) 14910526 104 64 104 33 36 31 5 18 14 0 0.63 1.00 1.00 346 ST_GA13_PATHWAY G-alpha-13 influences the actin cytoskeleton and activates protein kinase D, PI3K, and Pyk2. AKT1, AKT2, AKT3, ARHGEF11, BCL2, BF, CDC42, DLG4, GNA13, IKBKG, LPA, MAP2K4, MAP3K1, MAP3K5, MAPK8, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, PDK1, PHKA2, PI3, PIK3CB, PLD1, PLD2, PLD3, PRKCM, PTK2, RDX, ROCK1, ROCK2, SERPINA4, SRF, TBXA2R 34 AKT1(1), AKT3(3), ARHGEF11(8), CDC42(1), DLG4(1), GNA13(1), LPA(15), MAP2K4(1), MAP3K1(3), MAP3K5(4), MAPK8(2), NFKB1(2), NFKB2(2), NFKBIB(1), NFKBIE(1), NFKBIL1(2), NFKBIL2(4), PDK1(1), PHKA2(4), PI3(1), PIK3CB(4), PLD1(7), PLD2(2), PLD3(1), PTK2(6), RDX(2), ROCK1(5), ROCK2(3), SERPINA4(7), SRF(2), TBXA2R(2) 13111302 99 64 98 36 25 35 4 25 10 0 0.83 1.00 1.00 347 APOPTOSIS_KEGG APAF1, BAD, BAX, BCL2, BCL2A1, BCL2L1, BCL2L2, BOK, CASP1, CASP1, COPl, CASP10, CASP2, CASP3, CASP4, CASP6, CASP7, CASP8, CASP9, CD40, CD40LG, CRADD, CYCS, DAXX, DFFA, DFFB, FADD, FAS, FASLG, HRK, IKBKE, LTA, MCL1, NFKB1, NFKBIA, NGFB, NGFR, NR3C1, NTRK1, PTPN13, RIPK1, SFRS2IP, TFG, TNF, TNFRSF1A, TNFRSF1B, TRADD, TRAF1, TRAF2, TRAF3, TRAF6 47 APAF1(4), BAX(1), BCL2A1(2), BCL2L1(1), CASP1(1), CASP10(3), CASP2(1), CASP4(4), CASP7(2), CASP8(2), CASP9(3), CD40(2), CD40LG(3), CRADD(1), DAXX(3), DFFB(2), FADD(1), FAS(1), FASLG(1), IKBKE(3), LTA(2), MCL1(2), NFKB1(2), NGFR(1), NR3C1(1), NTRK1(4), PTPN13(9), SFRS2IP(4), TNF(1), TNFRSF1A(2), TNFRSF1B(1), TRADD(1), TRAF1(4), TRAF3(3), TRAF6(5) 11796772 83 63 82 35 25 17 5 18 18 0 0.97 1.00 1.00 348 BIOPEPTIDESPATHWAY Extracellular signaling peptides exert biological effects via G-protein coupled receptors (GPCRs), which activate intracellular GTPases. AGT, AGTR2, BDK, CALM1, CALM2, CALM3, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CDK5, F2, FYN, GNA11, GNAI1, GNB1, GNGT1, GRB2, HRAS, JAK2, MAP2K1, MAP2K2, MAPK1, MAPK14, MAPK3, MAPK8, MAPT, MYLK, PLCG1, PRKCA, PRKCB1, PTK2B, RAF1, SHC1, SOS1, STAT1, STAT3, STAT5A, SYT1 37 AGT(1), AGTR2(3), CALM2(1), CAMK2A(1), CAMK2B(2), CAMK2D(1), CDK5(1), FYN(5), GNA11(1), GNAI1(3), GNB1(1), HRAS(4), JAK2(4), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK14(1), MAPK3(1), MAPK8(2), MAPT(4), MYLK(8), PLCG1(3), PRKCA(5), RAF1(1), SHC1(2), SOS1(11), STAT1(2), STAT3(2), STAT5A(2), SYT1(4) 11172170 80 63 80 20 20 27 10 15 8 0 0.28 1.00 1.00 349 HSA00330_ARGININE_AND_PROLINE_METABOLISM Genes involved in arginine and proline metabolism ALDH4A1, ARG1, ARG2, ASL, ASS1, CKB, CKM, CKMT1A, CKMT1B, CKMT2, CPS1, DAO, EPRS, GAMT, GATM, GLUD1, GLUD2, GOT1, GOT2, LAP3, NOS1, NOS2A, NOS3, OAT, OTC, P4HA1, P4HA2, P4HA3, PARS2, PRODH, PYCR1, PYCR2, PYCRL, RARS, RARS2 33 ALDH4A1(3), ARG1(2), ASL(4), CKB(1), CKM(2), CKMT2(3), DAO(2), EPRS(12), GATM(1), GLUD1(4), GLUD2(9), GOT2(3), LAP3(1), NOS1(11), NOS3(2), OAT(1), OTC(3), P4HA1(2), P4HA2(3), P4HA3(3), PARS2(4), PRODH(1), PYCR1(1), RARS(4), RARS2(2) 8785546 84 63 84 19 23 31 3 12 15 0 0.098 1.00 1.00 350 INTEGRINPATHWAY Integrins are cell surface receptors commonly present at focal adhensions that interact with the extracellular matrix and transduce extracellular signaling. ACTA1, ACTN1, ACTN2, ACTN3, ARHA, BCAR1, BCR, CAPN1, CAPNS1, CAPNS2, CAV1, CRKL, CSK, FYN, GRB2, GRF2, HRAS, ITGA1, ITGB1, JUN, MAP2K1, MAP2K2, MAPK1, MAPK3, MAPK8, PPP1R12B, PTK2, PXN, RAF1, RAP1A, ROCK1, SHC1, SOS1, SRC, TLN1, TNS, VCL, ZYX 35 ACTA1(3), ACTN1(2), ACTN2(9), ACTN3(2), BCAR1(6), BCR(2), CAPN1(2), CAPNS2(1), CRKL(1), FYN(5), HRAS(4), ITGA1(4), ITGB1(5), JUN(3), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK3(1), MAPK8(2), PPP1R12B(5), PTK2(6), PXN(3), RAF1(1), RAP1A(1), ROCK1(5), SHC1(2), SOS1(11), TLN1(6), VCL(2), ZYX(1) 12629812 99 63 98 31 29 34 5 22 9 0 0.54 1.00 1.00 351 BCRPATHWAY B cell antigen receptors (BCRs) activate tyrosine kinases and transiently increase tyrosine phosphorylation on binding to antigen. BLNK, BTK, CALM1, CALM2, CALM3, CD79A, CD79B, ELK1, FOS, GRB2, HRAS, JUN, LYN, MAP2K1, MAP3K1, MAPK14, MAPK3, MAPK8, NFATC1, NFATC2, NFATC3, NFATC4, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKCA, PRKCB1, RAC1, RAF1, SHC1, SOS1, SYK, SYT1, VAV1 34 BLNK(1), BTK(7), CALM2(1), CD79A(1), FOS(2), HRAS(4), JUN(3), LYN(2), MAP2K1(2), MAP3K1(3), MAPK14(1), MAPK3(1), MAPK8(2), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), PLCG1(3), PPP3CA(4), PPP3CB(4), PPP3CC(2), PRKCA(5), RAC1(1), RAF1(1), SHC1(2), SOS1(11), SYK(1), SYT1(4), VAV1(7) 10202070 90 62 89 22 29 33 8 11 9 0 0.24 1.00 1.00 352 GPCRDB_CLASS_B_SECRETIN_LIKE ADCYAP1R1, CALCR, CALCRL, CD97, CRHR1, CRHR2, ELTD1, EMR1, EMR2, GCGR, GHRHR, GIPR, GLP1R, GLP2R, GPR64, LPHN1, LPHN2, LPHN3, PTHR1, PTHR2, SCTR, VIPR1, VIPR2 19 ADCYAP1R1(9), CALCR(10), CALCRL(3), CRHR1(3), CRHR2(3), EMR1(11), EMR2(4), GHRHR(4), GLP1R(1), GLP2R(5), GPR64(5), LPHN1(3), LPHN2(7), LPHN3(17), SCTR(1), VIPR2(3) 6830928 89 62 89 28 29 28 8 18 6 0 0.36 1.00 1.00 353 HSA00340_HISTIDINE_METABOLISM Genes involved in histidine metabolism ABP1, ACY3, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH3B1, ALDH3B2, ALDH7A1, ALDH9A1, AMDHD1, AOC2, AOC3, ASPA, CARM1, CNDP1, DDC, FTCD, HAL, HARS, HARS2, HDC, HEMK1, HNMT, LCMT1, LCMT2, MAOA, MAOB, METTL2B, METTL6, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, PRPS1, PRPS2, UROC1, WBSCR22 41 ABP1(5), ACY3(2), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH3B2(1), ALDH7A1(1), ALDH9A1(2), AMDHD1(1), AOC2(2), AOC3(3), CARM1(1), CNDP1(3), DDC(4), FTCD(3), HAL(2), HARS(2), HARS2(2), HDC(6), HNMT(3), LCMT1(2), LCMT2(2), METTL2B(1), METTL6(2), PRMT2(2), PRMT3(3), PRMT5(2), PRMT6(2), PRMT7(6), PRMT8(3), PRPS1(2), PRPS2(1), UROC1(3), WBSCR22(3) 10641018 83 62 83 32 13 39 6 15 10 0 0.70 1.00 1.00 354 HSA03022_BASAL_TRANSCRIPTION_FACTORS Genes involved in basal transcription factors GTF2A1, GTF2A1L, GTF2A2, GTF2B, GTF2E1, GTF2E2, GTF2F1, GTF2F2, GTF2H1, GTF2H2, GTF2H3, GTF2H4, GTF2I, GTF2IRD1, LOC391764, STON1, TAF1, TAF10, TAF12, TAF13, TAF1L, TAF2, TAF4, TAF4B, TAF5, TAF5L, TAF6, TAF6L, TAF7, TAF7L, TAF9, TAF9B, TBPL1, TBPL2 32 GTF2A1(1), GTF2B(2), GTF2E1(2), GTF2F1(1), GTF2H1(2), GTF2H3(1), GTF2H4(2), GTF2I(2), GTF2IRD1(5), TAF1(14), TAF1L(20), TAF2(10), TAF4(3), TAF4B(4), TAF5(1), TAF5L(2), TAF6L(2), TAF7L(2), TAF9(2), TBPL2(1) 9630512 79 62 79 20 21 28 9 12 9 0 0.39 1.00 1.00 355 HSA05110_CHOLERA_INFECTION Genes involved in cholera - infection ACTG1, ACTG2, ADCY3, ADCY9, AK1, ARF1, ARF3, ARF4, ARF5, ARF6, ARL4D, ATP6V0A1, ATP6V0A2, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0D1, ATP6V0D2, ATP6V0E1, ATP6V1A, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1E2, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H, ERO1L, GNAS, PDIA4, PLCG1, PLCG2, PRKCA, SEC61A1, SEC61A2, SEC61B, SEC61G, TRIM23 41 ACTG1(2), ACTG2(6), ADCY3(7), ADCY9(3), ARF1(1), ARF5(4), ATP6V0A1(4), ATP6V0A2(5), ATP6V0A4(3), ATP6V0D1(2), ATP6V0D2(2), ATP6V1A(4), ATP6V1C1(1), ATP6V1C2(1), ATP6V1D(1), ATP6V1G2(1), ATP6V1G3(1), ATP6V1H(3), ERO1L(1), GNAS(6), PDIA4(4), PLCG1(3), PLCG2(4), PRKCA(5), SEC61A1(2), SEC61A2(1), SEC61G(2), TRIM23(3) 9877398 82 62 82 23 22 29 7 16 8 0 0.34 1.00 1.00 356 MONOAMINE_GPCRS ADRA1A, ADRA1B, ADRA1D, ADRA2A, ADRA2C, ADRB1, ADRB2, ADRB3, CHRM1, CHRM2, CHRM3, CHRM4, CHRM5, DRD1, DRD2, DRD3, DRD4, DRD5, HRH1, HRH2, HTR1A, HTR1B, HTR1D, HTR1E, HTR1F, HTR2A, HTR2B, HTR2C, HTR4, HTR5A, HTR6, HTR7, HTR7, LOC93164 32 ADRA1A(2), ADRA1B(3), ADRA1D(3), ADRA2C(2), ADRB1(1), ADRB2(4), CHRM2(8), CHRM3(5), CHRM4(1), CHRM5(3), DRD1(1), DRD2(4), DRD3(5), DRD4(1), DRD5(5), HRH1(3), HRH2(1), HTR1A(7), HTR1B(3), HTR1E(5), HTR1F(2), HTR2A(3), HTR2B(1), HTR2C(4), HTR4(3), HTR5A(4), HTR6(1), HTR7(3) 6854068 88 62 88 39 21 34 7 18 8 0 0.66 1.00 1.00 357 PYRIMIDINE_METABOLISM AK3, AK3L1, AK3L1, AK3L2, CAD, CANT1, CDA, CMPK, CTPS, CTPS2, DCK, DCTD, DHODH, DPYD, DPYS, DTYMK, DUT, ECGF1, ENTPD1, ITPA, NME1, NME2, NP, NT5C, NT5E, NT5M, NUDT2, POLA, POLB, POLD1, POLD2, POLE, POLG, POLL, POLQ, POLR1B, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLRMT, POLS, RRM1, RRM2, TK1, TK2, TXNRD1, TYMS, UCK1, UCK2, UMPS, UNG, UPB1, UPP1 55 CAD(10), CANT1(1), CDA(1), CTPS(3), CTPS2(2), DCK(1), DCTD(1), DPYD(8), DPYS(6), DTYMK(1), ENTPD1(1), NT5E(2), POLB(1), POLD1(2), POLD2(1), POLE(7), POLG(2), POLL(2), POLQ(18), POLR1B(2), POLR2A(2), POLR2B(6), POLR2D(1), POLR2E(2), POLRMT(2), RRM1(1), RRM2(1), TXNRD1(2), UMPS(2), UPP1(3) 15394686 94 62 94 24 27 36 3 15 13 0 0.21 1.00 1.00 358 ST_JNK_MAPK_PATHWAY JNKs are MAP kinases regulated by several levels of kinases (MAPKK, MAPKKK) and phosphorylate transcription factors and regulatory proteins. AKT1, ATF2, CDC42, DLD, DUSP10, DUSP4, DUSP8, GAB1, GADD45A, GCK, IL1R1, JUN, MAP2K4, MAP2K5, MAP2K7, MAP3K1, MAP3K10, MAP3K11, MAP3K12, MAP3K13, MAP3K2, MAP3K3, MAP3K4, MAP3K5, MAP3K7, MAP3K7IP1, MAP3K7IP2, MAP3K9, MAPK10, MAPK7, MAPK8, MAPK9, MYEF2, NFATC3, NR2C2, PAPPA, SHC1, TP53, TRAF6, ZAK 37 AKT1(1), ATF2(3), CDC42(1), DLD(2), DUSP10(4), DUSP4(2), DUSP8(1), GAB1(2), GADD45A(1), GCK(5), IL1R1(1), JUN(3), MAP2K4(1), MAP2K5(1), MAP2K7(1), MAP3K1(3), MAP3K11(2), MAP3K12(4), MAP3K13(5), MAP3K3(1), MAP3K4(4), MAP3K5(4), MAP3K7(2), MAP3K9(4), MAPK10(1), MAPK7(1), MAPK8(2), MAPK9(1), MYEF2(4), NFATC3(6), NR2C2(3), PAPPA(8), SHC1(2), TRAF6(5) 13212406 91 62 90 29 38 35 3 11 4 0 0.67 1.00 1.00 359 CARM_ERPATHWAY Methyltransferase CARM1 methylates CBP and co-activates estrogen receptors via Grip1. BRCA1, CARM1, CCND1, CREBBP, EP300, ERCC3, ESR1, GRIP1, GTF2A1, GTF2E1, GTF2F1, HDAC1, HDAC2, HDAC3, HDAC4, HDAC5, HDAC6, HIST2H3C, MEF2C, NCOR2, NR0B1, NRIP1, PELP1, POLR2A, PPARBP, PPARGC1, REA, SHARP, SRA1, TBP 25 BRCA1(12), CARM1(1), CCND1(1), CREBBP(17), EP300(9), ERCC3(1), ESR1(6), GRIP1(6), GTF2A1(1), GTF2E1(2), GTF2F1(1), HDAC1(2), HDAC3(1), HDAC4(5), HDAC5(1), MEF2C(4), NCOR2(6), NR0B1(4), NRIP1(3), POLR2A(2), TBP(1) 12332730 86 61 85 30 20 31 4 20 11 0 0.75 1.00 1.00 360 DNA_REPLICATION_REACTOME ASK, CDC45L, CDC6, CDC7, CDK2, CDT1, DIAPH2, GMNN, MCM10, MCM2, MCM3, MCM4, MCM5, MCM6, MCM7, NACA, NACA, FKSG17, ORC1L, ORC2L, ORC3L, ORC4L, ORC5L, ORC6L, PCNA, POLA, POLA2, POLD1, POLD2, POLD3, POLD4, POLE, POLE2, PRIM1, PRIM2A, RFC1, RFC2, RFC3, RFC4, RFC5, RPA1, RPA2, RPA3, RPA4, RPS27A, RPS27A, LOC388720, LOC389425, UBA52, UBB, UBC 42 CDC6(6), CDC7(3), DIAPH2(4), GMNN(2), MCM10(4), MCM2(1), MCM3(1), MCM4(5), MCM5(6), MCM6(3), MCM7(3), ORC1L(3), ORC2L(1), ORC3L(2), ORC5L(3), POLD1(2), POLD2(1), POLD3(1), POLE(7), POLE2(2), PRIM1(3), RFC1(1), RFC4(5), RFC5(1), RPA1(1), RPA2(1), RPA4(2), UBB(2), UBC(1) 13620916 77 61 77 26 27 19 1 18 12 0 0.70 1.00 1.00 361 EGFPATHWAY The epidermal growth factor (EGF) peptide stimulates the EGF receptor to promote cell proliferation via the MAP kinase and Ras pathways. CSNK2A1, EGF, EGFR, ELK1, FOS, GRB2, HRAS, JAK1, JUN, MAP2K1, MAP2K4, MAP3K1, MAPK3, MAPK8, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, RAF1, RASA1, SHC1, SOS1, SRF, STAT1, STAT3, STAT5A 25 CSNK2A1(3), EGF(6), EGFR(7), FOS(2), HRAS(4), JAK1(2), JUN(3), MAP2K1(2), MAP2K4(1), MAP3K1(3), MAPK3(1), MAPK8(2), PIK3R1(2), PLCG1(3), PRKCA(5), RAF1(1), RASA1(8), SHC1(2), SOS1(11), SRF(2), STAT1(2), STAT3(2), STAT5A(2) 9406766 76 61 74 15 25 22 4 12 13 0 0.10 1.00 1.00 362 GPCRDB_CLASS_C_METABOTROPIC_GLUTAMATE_PHEROMONE CASR, GABBR1, GPCR5A, GPR51, GPRC5A, GPRC5B, GPRC5C, GPRC5D, GRM1, GRM2, GRM3, GRM4, GRM5, GRM7, GRM8 13 CASR(11), GABBR1(3), GPRC5A(1), GPRC5C(4), GRM1(12), GRM2(2), GRM3(14), GRM4(3), GRM5(12), GRM7(10), GRM8(13) 5579944 85 61 85 35 18 31 13 14 9 0 0.79 1.00 1.00 363 HSA00052_GALACTOSE_METABOLISM Genes involved in galactose metabolism AKR1B1, AKR1B10, B4GALT1, B4GALT2, G6PC, G6PC2, GAA, GALE, GALK1, GALK2, GALT, GANC, GCK, GLA, GLB1, HK1, HK2, HK3, HSD3B7, LALBA, LCT, MGAM, PFKL, PFKM, PFKP, PGM1, PGM3, RDH11, RDH12, RDH13, RDH14, UGP2 32 AKR1B1(1), AKR1B10(2), B4GALT1(1), G6PC(3), G6PC2(3), GALK2(1), GALT(1), GANC(5), GCK(5), GLA(2), HK1(3), HK2(5), HK3(5), LCT(18), MGAM(5), PFKL(2), PFKM(5), PFKP(2), PGM1(1), RDH11(1), RDH12(2), RDH13(1), UGP2(4) 10438632 78 61 78 29 19 26 4 18 11 0 0.64 1.00 1.00 364 NOS1PATHWAY Glutamate stimulates NMDA-mediates calcium influx, which promotes nitric oxide synthesis from arginine by neuronal nitric oxide synthase, activating guanylate cyclase. CALM1, CALM2, CALM3, DLG4, GRIN1, GRIN2A, GRIN2B, GRIN2C, GRIN2D, NOS1, PPP3CA, PPP3CB, PPP3CC, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, SYT1 21 CALM2(1), DLG4(1), GRIN1(1), GRIN2A(16), GRIN2B(18), GRIN2C(3), GRIN2D(3), NOS1(11), PPP3CA(4), PPP3CB(4), PPP3CC(2), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PRKCA(5), SYT1(4) 6859586 83 61 82 30 23 29 7 13 11 0 0.67 1.00 1.00 365 ST_DICTYOSTELIUM_DISCOIDEUM_CAMP_CHEMOTAXIS_PATHWAY The fungus Dictyostelium discoideum is a model system for cytoskeletal organization during chemotaxis. ACTR2, ACTR3, AKT1, ANGPTL2, BF, DAG1, DGKA, ETFA, GCA, ITGA9, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, MAP2K1, MAPK1, MAPK3, NR1I3, PAK1, PDE3A, PDE3B, PI3, PIK3C2G, PIK3CA, PIK3CD, PIK3R1, PLDN, PSME1, RIPK3, RPS4X, SGCB, VASP 31 AKT1(1), DAG1(2), DGKA(3), ETFA(3), GCA(2), ITGA9(2), ITPKA(1), ITPKB(6), ITPR1(6), ITPR2(13), ITPR3(4), MAP2K1(2), MAPK1(1), MAPK3(1), NR1I3(1), PAK1(2), PDE3A(7), PDE3B(5), PI3(1), PIK3C2G(8), PIK3CD(4), PIK3R1(2), RIPK3(1), SGCB(3), VASP(2) 12588516 83 61 82 31 24 33 4 11 11 0 0.72 1.00 1.00 366 AT1RPATHWAY Binding of angiotensin II to AT1-R activates Ca2+ signaling and the JNK pathway. AGT, AGTR1, ATF2, CALM1, CALM2, CALM3, EGFR, ELK1, GNAQ, GRB2, HRAS, JUN, MAP2K1, MAP2K2, MAP2K4, MAP3K1, MAPK1, MAPK3, MAPK8, MEF2A, MEF2B, MEF2C, MEF2D, PAK1, PRKCA, PRKCB1, PTK2, PTK2B, RAC1, RAF1, SHC1, SOS1, SRC, SYT1 32 AGT(1), AGTR1(5), ATF2(3), CALM2(1), EGFR(7), HRAS(4), JUN(3), MAP2K1(2), MAP2K2(1), MAP2K4(1), MAP3K1(3), MAPK1(1), MAPK3(1), MAPK8(2), MEF2A(3), MEF2C(4), PAK1(2), PRKCA(5), PTK2(6), RAC1(1), RAF1(1), SHC1(2), SOS1(11), SYT1(4) 8744428 74 60 72 21 22 26 5 17 4 0 0.46 1.00 1.00 367 HSA01031_GLYCAN_STRUCTURES_BIOSYNTHESIS_2 Genes involved in glycan structures - biosynthesis 2 A4GALT, ABO, B3GALNT1, B3GALT1, B3GALT2, B3GALT4, B3GALT5, B3GNT1, B3GNT2, B3GNT3, B3GNT4, B3GNT5, B4GALNT1, B4GALT1, B4GALT2, B4GALT3, B4GALT4, B4GALT6, FUT1, FUT2, FUT3, FUT4, FUT5, FUT6, FUT7, FUT9, GBGT1, GCNT2, PIGA, PIGB, PIGC, PIGF, PIGG, PIGH, PIGK, PIGL, PIGM, PIGN, PIGO, PIGP, PIGQ, PIGS, PIGT, PIGU, PIGV, PIGX, PIGZ, ST3GAL1, ST3GAL2, ST3GAL3, ST3GAL4, ST3GAL5, ST3GAL6, ST6GALNAC3, ST6GALNAC4, ST6GALNAC5, ST6GALNAC6, ST8SIA1, ST8SIA5, UGCG, UGCGL1, UGCGL2 60 ABO(1), B3GALT1(3), B3GALT2(3), B3GALT4(1), B3GNT2(1), B3GNT3(4), B3GNT4(1), B4GALT1(1), B4GALT3(3), B4GALT4(3), B4GALT6(2), FUT2(1), FUT3(3), FUT5(4), FUT6(2), FUT9(5), GBGT1(2), GCNT2(2), PIGB(1), PIGF(1), PIGG(4), PIGH(1), PIGK(1), PIGL(2), PIGN(1), PIGO(2), PIGQ(1), PIGT(1), PIGX(1), PIGZ(2), ST3GAL1(4), ST3GAL4(2), ST3GAL5(2), ST3GAL6(2), ST6GALNAC3(5), ST6GALNAC4(1), ST6GALNAC5(3), ST8SIA1(3), UGCG(1) 12992398 83 60 83 37 22 32 9 11 9 0 0.87 1.00 1.00 368 APOPTOSIS APAF1, BAD, BAK1, BCL2L7P1, BAX, BCL2, BCL2L1, BCL2L11, BID, BIRC2, BIRC3, BIRC4, BIRC5, BNIP3L, CASP1, CASP10, CASP1, COPl, CASP2, CASP3, CASP4, CASP6, CASP7, CASP8, CASP9, CHUK, CYCS, DFFA, DFFB, FADD, FAS, FASLG, GZMB, HELLS, HRK, IKBKB, IKBKG, IRF1, IRF2, IRF3, IRF4, IRF5, IRF6, IRF7, JUN, LTA, MAP2K4, MAP3K1, MAPK10, MDM2, MYC, NFKB1, NFKBIA, NFKBIB, NFKBIE, PRF1, RELA, RIPK1, TNF, TNFRSF10B, TNFRSF1A, TNFRSF1B, TNFRSF21, TNFRSF25, TNFRSF25, PLEKHG5, TNFSF10, TP53, TP73, TRADD, TRAF1, TRAF2, TRAF3 65 APAF1(4), BAK1(1), BAX(1), BCL2L1(1), BIRC2(1), BIRC3(3), CASP1(1), CASP10(3), CASP2(1), CASP4(4), CASP7(2), CASP8(2), CASP9(3), CHUK(2), DFFB(2), FADD(1), FAS(1), FASLG(1), GZMB(1), IKBKB(2), IRF1(1), IRF3(1), IRF4(2), IRF6(6), JUN(3), LTA(2), MAP2K4(1), MAP3K1(3), MAPK10(1), MDM2(2), MYC(1), NFKB1(2), NFKBIB(1), NFKBIE(1), PRF1(2), RELA(3), TNF(1), TNFRSF10B(1), TNFRSF1A(2), TNFRSF1B(1), TNFRSF21(3), TRADD(1), TRAF1(4), TRAF3(3) 15250150 85 59 83 32 24 20 6 17 18 0 0.87 1.00 1.00 369 GLUTAMATE_METABOLISM ABAT, ALDH4A1, ALDH5A1, CAD, CPS1, EPRS, GAD1, GAD2, GCLC, GCLM, GFPT1, GLS, GLS2, GLUD1, GLUL, GMPS, GOT1, GOT2, GPT, GPT2, GSS, NADSYN1, PPAT, QARS 23 ABAT(3), ALDH4A1(3), ALDH5A1(1), CAD(10), EPRS(12), GAD1(5), GAD2(6), GCLC(2), GCLM(1), GFPT1(1), GLS(4), GLS2(1), GLUD1(4), GLUL(4), GOT2(3), GPT(1), GPT2(4), GSS(2), NADSYN1(7), PPAT(2) 8059128 76 59 76 21 18 31 4 17 6 0 0.35 1.00 1.00 370 HSA00620_PYRUVATE_METABOLISM Genes involved in pyruvate metabolism ACACA, ACACB, ACAT1, ACAT2, ACOT12, ACSS1, ACSS2, ACYP1, ACYP2, AKR1B1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, DLAT, DLD, GLO1, GRHPR, HAGH, HAGHL, LDHA, LDHAL6A, LDHAL6B, LDHB, LDHC, LDHD, MDH1, MDH2, ME1, ME2, ME3, PC, PCK1, PCK2, PDHA1, PDHA2, PDHB, PKLR, PKM2 42 ACACA(2), ACACB(9), ACAT1(2), ACOT12(1), ACSS1(3), AKR1B1(1), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH7A1(1), ALDH9A1(2), DLAT(1), DLD(2), GRHPR(2), HAGHL(1), LDHAL6A(2), LDHAL6B(1), LDHB(3), LDHC(3), LDHD(6), MDH1(1), MDH2(1), ME1(2), ME2(3), ME3(2), PC(2), PCK1(2), PCK2(1), PDHA1(3), PDHA2(8), PKLR(4), PKM2(3) 12512866 80 59 80 40 23 28 4 16 9 0 0.99 1.00 1.00 371 HSA04740_OLFACTORY_TRANSDUCTION Genes involved in olfactory transduction ADCY3, ADRBK2, ARRB2, CALM1, CALM2, CALM3, CALML3, CALML6, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CLCA1, CLCA2, CLCA4, CNGA3, CNGA4, CNGB1, GNAL, GUCA1A, GUCA1B, GUCA1C, PDC, PDE1C, PRKACA, PRKACB, PRKACG, PRKG1, PRKG2, PRKX, PRKY 30 ADCY3(7), ADRBK2(2), CALM2(1), CALML6(1), CAMK2A(1), CAMK2B(2), CAMK2D(1), CLCA1(7), CLCA2(5), CLCA4(2), CNGA3(6), CNGA4(6), CNGB1(4), GNAL(1), GUCA1A(2), GUCA1C(1), PDE1C(12), PRKACB(3), PRKACG(1), PRKG1(6), PRKG2(4), PRKX(1) 8159698 76 59 76 18 17 35 5 8 11 0 0.13 1.00 1.00 372 ST_WNT_BETA_CATENIN_PATHWAY Beta-catenin is degraded in the absence of Wnt signaling; when extracellular Wnt binds Frizzled receptors, beta-catenin accumulates in the nucleus and may promote cell survival. AKT1, AKT2, AKT3, ANKRD6, APC, AXIN1, AXIN2, C22orf2, CER1, CSNK1A1, CTNNB1, DACT1, DKK1, DKK2, DKK3, DKK4, DVL1, FRAT1, FSTL1, GSK3A, GSK3B, IDAX, LAMR1, LRP1, MVP, NKD1, NKD2, PIN1, PSEN1, PTPRA, SENP2, SFRP1, TSHB, WIF1 30 AKT1(1), AKT3(3), ANKRD6(1), APC(9), AXIN2(2), CER1(2), CSNK1A1(2), CTNNB1(4), DACT1(4), DKK1(4), DKK2(1), DVL1(3), FSTL1(2), GSK3A(3), LRP1(15), MVP(2), NKD1(2), NKD2(2), PSEN1(3), SENP2(3), SFRP1(1), WIF1(5) 10825070 74 59 74 26 15 32 4 13 9 1 0.69 1.00 1.00 373 FMLPPATHWAY The fMLP receptor is a G-protein coupled receptor in neutrophils that recognizes formylated bacterial peptides and activates NADPH oxidase. CALM1, CALM2, CALM3, CAMK1, CAMK1G, ELK1, FPR1, GNA15, GNB1, GNGT1, HRAS, MAP2K1, MAP2K2, MAP2K3, MAP2K6, MAP3K1, MAPK1, MAPK14, MAPK3, NCF1, NCF2, NFATC1, NFATC2, NFATC3, NFATC4, NFKB1, NFKBIA, PAK1, PIK3C2G, PLCB1, PPP3CA, PPP3CB, PPP3CC, RAC1, RAF1, RELA, SYT1 37 CALM2(1), CAMK1G(3), FPR1(1), GNA15(1), GNB1(1), HRAS(4), MAP2K1(2), MAP2K2(1), MAP2K3(3), MAP2K6(2), MAP3K1(3), MAPK1(1), MAPK14(1), MAPK3(1), NCF2(3), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), NFKB1(2), PAK1(2), PIK3C2G(8), PLCB1(8), PPP3CA(4), PPP3CB(4), PPP3CC(2), RAC1(1), RAF1(1), RELA(3), SYT1(4) 10298368 82 58 82 33 20 36 6 14 6 0 0.90 1.00 1.00 374 HSA00600_SPHINGOLIPID_METABOLISM Genes involved in sphingolipid metabolism ARSA, ARSD, ARSE, ASAH1, ASAH3L, B4GALT6, CERK, DEGS1, DEGS2, ENPP7, FVT1, GAL3ST1, GALC, GBA, GLA, GLB1, LCT, NEU1, NEU2, NEU3, NEU4, PHCA, PPAP2A, PPAP2B, PPAP2C, SGMS1, SGMS2, SGPP1, SGPP2, SMPD1, SMPD2, SMPD3, SMPD4, SPHK1, SPHK2, SPTLC1, SPTLC2, UGCG, UGT8 35 ARSA(2), ARSD(1), ARSE(2), B4GALT6(2), CERK(6), DEGS1(1), ENPP7(5), GAL3ST1(1), GALC(2), GBA(4), GLA(2), LCT(18), NEU1(2), NEU2(2), NEU4(2), PPAP2B(2), SGMS1(3), SGMS2(1), SGPP1(2), SMPD1(4), SMPD2(1), SMPD3(3), SPHK2(1), SPTLC1(1), SPTLC2(3), UGCG(1), UGT8(5) 9239624 79 58 79 28 18 26 7 19 9 0 0.60 1.00 1.00 375 HSA00650_BUTANOATE_METABOLISM Genes involved in butanoate metabolism AACS, AADAC, ABAT, ACADS, ACAT1, ACAT2, ACSM1, AKR1B10, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH5A1, ALDH7A1, ALDH9A1, BDH1, BDH2, DDHD1, ECHS1, EHHADH, GAD1, GAD2, HADH, HADHA, HMGCL, HMGCS1, HMGCS2, HSD17B10, HSD17B4, HSD3B7, ILVBL, L2HGDH, OXCT1, OXCT2, PDHA1, PDHA2, PDHB, PLA1A, PPME1, PRDX6, RDH11, RDH12, RDH13, RDH14 45 AACS(1), AADAC(3), ABAT(3), ACADS(2), ACAT1(2), ACSM1(5), AKR1B10(2), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH5A1(1), ALDH7A1(1), ALDH9A1(2), BDH1(4), DDHD1(5), ECHS1(1), EHHADH(1), GAD1(5), GAD2(6), HADH(1), HADHA(2), HMGCL(1), HMGCS1(1), HMGCS2(3), HSD17B4(1), ILVBL(2), OXCT1(3), PDHA1(3), PDHA2(8), PLA1A(5), PRDX6(2), RDH11(1), RDH12(2), RDH13(1) 10842514 86 58 86 36 25 32 2 19 8 0 0.91 1.00 1.00 376 OVARIAN_INFERTILITY_GENES ATM, BMPR1B, CCND2, CDK4, CDKN1B, CEBPB, DAZL, DMC1, EGR1, ESR2, FSHR, GJA4, INHA, LHCGR, MLH1, MSH5, NCOR1, NR5A1, NRIP1, PGR, PRLR, PTGER2, SMPD1, VDR, ZP2 25 ATM(8), BMPR1B(1), CCND2(3), DAZL(1), DMC1(1), EGR1(2), ESR2(2), FSHR(15), GJA4(1), INHA(3), LHCGR(9), MLH1(2), MSH5(3), NCOR1(8), NRIP1(3), PGR(4), PRLR(6), PTGER2(2), SMPD1(4), VDR(4), ZP2(2) 9380066 84 58 84 32 25 28 4 15 12 0 0.90 1.00 1.00 377 ST_INTERLEUKIN_4_PATHWAY Like IL-13, IL-4 is produced by Th2 cells on activation of the T cell antigen receptor, and by mast and basophil cells on activation of the IgE receptor. AKT1, AKT2, AKT3, CISH, GRB2, IARS, IL13RA1, IL2RG, IL4, IL4R, INPP5D, JAK1, JAK2, JAK3, NR0B2, PI3, PIK3CA, PPP1R13B, RPS6KB1, SERPINA4, SHC1, SOS1, SOS2, SRC, STAT6, TYK2 25 AKT1(1), AKT3(3), IARS(3), IL13RA1(2), IL2RG(1), IL4(2), IL4R(2), INPP5D(8), JAK1(2), JAK2(4), JAK3(7), NR0B2(1), PI3(1), PPP1R13B(5), RPS6KB1(1), SERPINA4(7), SHC1(2), SOS1(11), SOS2(7), STAT6(2), TYK2(8) 9302992 80 58 80 19 22 25 4 16 13 0 0.17 1.00 1.00 378 ERKPATHWAY Cell growth is promoted by Ras activation of the anti-apoptotic p44/42 MAP kinase pathway. DPM2, EGFR, ELK1, GNAS, GNB1, GNGT1, GRB2, HRAS, IGF1R, ITGB1, KLK2, MAP2K1, MAP2K2, MAPK1, MAPK3, MKNK1, MKNK2, MYC, NGFB, NGFR, PDGFRA, PPP2CA, PTPRR, RAF1, RPS6KA1, RPS6KA5, SHC1, SOS1, SRC, STAT3 29 EGFR(7), GNAS(6), GNB1(1), HRAS(4), IGF1R(1), ITGB1(5), KLK2(2), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK3(1), MKNK2(1), MYC(1), NGFR(1), PDGFRA(10), PTPRR(9), RAF1(1), RPS6KA1(2), RPS6KA5(4), SHC1(2), SOS1(11), STAT3(2) 8842684 75 57 74 21 18 31 6 16 4 0 0.38 1.00 1.00 379 HSA00790_FOLATE_BIOSYNTHESIS Genes involved in folate biosynthesis ALPI, ALPL, ALPP, ALPPL2, ASCC3, ASCC3L1, ATP13A2, DDX18, DDX19A, DDX23, DDX4, DDX41, DDX47, DDX50, DDX51, DDX52, DDX54, DDX55, DDX56, DHFR, DHX58, ENTPD7, EP400, ERCC2, ERCC3, FPGS, GCH1, GGH, IFIH1, MOV10L1, NUDT5, NUDT8, PTS, QDPR, RAD54B, RAD54L, RUVBL2, SETX, SKIV2L2, SMARCA2, SMARCA5, SPR 41 ALPL(3), ALPP(3), ALPPL2(1), ASCC3(10), ATP13A2(1), DDX18(2), DDX19A(1), DDX23(3), DDX4(2), DDX41(2), DDX50(1), DDX51(1), DDX52(1), DDX54(3), DDX55(1), DDX56(1), ENTPD7(2), EP400(9), ERCC3(1), FPGS(2), GCH1(1), GGH(2), IFIH1(4), MOV10L1(7), NUDT8(1), RAD54L(1), SETX(12), SKIV2L2(2), SMARCA2(4) 16887928 84 57 84 39 26 30 9 11 8 0 0.98 1.00 1.00 380 HSA01032_GLYCAN_STRUCTURES_DEGRADATION Genes involved in degradation of glycan structures AGA, ARSB, FLJ21865, FUCA1, FUCA2, GALNS, GBA, GLB1, GNS, GUSB, HEXA, HEXB, HGSNAT, HPSE, HPSE2, HYAL1, HYAL2, IDS, IDUA, LCT, MAN2B1, MAN2B2, MAN2C1, MANBA, NAGLU, NEU1, NEU2, NEU3, NEU4, SPAM1 29 AGA(3), ARSB(1), FUCA1(2), FUCA2(1), GALNS(3), GBA(4), GNS(1), GUSB(2), HEXA(5), HGSNAT(1), HPSE(3), HPSE2(2), HYAL1(3), IDS(1), IDUA(2), LCT(18), MAN2B1(2), MAN2B2(3), MAN2C1(6), MANBA(2), NEU1(2), NEU2(2), NEU4(2), SPAM1(6) 9287506 77 57 77 26 19 21 6 23 8 0 0.60 1.00 1.00 381 MCALPAINPATHWAY In integrin-mediated cell migration, calpains digest links between the actin cytoskeleton and focal adhesion proteins. ACTA1, CAPN1, CAPN2, CAPNS1, CAPNS2, CXCR3, EGF, EGFR, HRAS, ITGA1, ITGB1, MAPK1, MAPK3, MYL2, MYLK, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PTK2, PXN, TLN1, VIL2 24 ACTA1(3), CAPN1(2), CAPN2(2), CAPNS2(1), CXCR3(1), EGF(6), EGFR(7), HRAS(4), ITGA1(4), ITGB1(5), MAPK1(1), MAPK3(1), MYL2(2), MYLK(8), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PTK2(6), PXN(3), TLN1(6) 8774332 72 57 71 20 19 25 6 14 8 0 0.37 1.00 1.00 382 TYROSINE_METABOLISM ABP1, ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1, ALDH1A3, ALDH3A1, ALDH3B1, ALDH3B2, AOC2, AOC3, AOX1, COMT, DBH, DCT, DDC, FAH, GOT1, GOT2, GSTZ1, HGD, HPD, MAOA, MAOB, PNMT, TAT, TH, TPO, TYR 32 ABP1(5), ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH7(1), ADHFE1(2), ALDH3A1(2), ALDH3B2(1), AOC2(2), AOC3(3), AOX1(13), DBH(1), DCT(4), DDC(4), FAH(1), GOT2(3), GSTZ1(2), HGD(4), HPD(1), PNMT(2), TAT(1), TH(1), TPO(10), TYR(10) 8507332 79 57 79 26 17 35 3 19 5 0 0.45 1.00 1.00 383 HSA00071_FATTY_ACID_METABOLISM Genes involved in fatty acid metabolism ACAA1, ACAA2, ACADL, ACADM, ACADS, ACADSB, ACADVL, ACAT1, ACAT2, ACOX1, ACOX3, ACSL1, ACSL3, ACSL4, ACSL5, ACSL6, ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, CPT1A, CPT1B, CPT1C, CPT2, CYP4A11, CYP4A22, DCI, ECHS1, EHHADH, GCDH, HADH, HADHA, HADHB, HSD17B10, HSD17B4, PECI 47 ACAA1(1), ACAA2(1), ACADL(2), ACADM(1), ACADS(2), ACADVL(1), ACAT1(2), ACOX1(2), ACOX3(5), ACSL1(2), ACSL3(2), ACSL4(2), ACSL6(2), ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH5(1), ADH7(1), ADHFE1(2), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH7A1(1), ALDH9A1(2), CPT1A(5), CPT1B(3), CPT1C(3), CPT2(2), CYP4A22(2), DCI(1), ECHS1(1), EHHADH(1), GCDH(2), HADH(1), HADHA(2), HADHB(3), HSD17B4(1), PECI(1) 13091010 72 56 72 23 16 32 4 12 8 0 0.53 1.00 1.00 384 HSA00280_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION Genes involved in valine, leucine and isoleucine degradation ABAT, ACAA1, ACAA2, ACADM, ACADS, ACAT1, ACAT2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH6A1, ALDH7A1, ALDH9A1, AOX1, AUH, BCAT1, BCAT2, BCKDHA, BCKDHB, DBT, DLD, ECHS1, EHHADH, HADH, HADHA, HADHB, HIBADH, HIBCH, HMGCL, HMGCS1, HMGCS2, HSD17B10, HSD17B4, IVD, MCCC1, MCCC2, MCEE, MUT, OXCT1, OXCT2, PCCA, PCCB 44 ABAT(3), ACAA1(1), ACAA2(1), ACADM(1), ACADS(2), ACAT1(2), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH6A1(1), ALDH7A1(1), ALDH9A1(2), AOX1(13), AUH(1), BCAT1(1), BCAT2(2), BCKDHB(2), DBT(1), DLD(2), ECHS1(1), EHHADH(1), HADH(1), HADHA(2), HADHB(3), HIBADH(1), HIBCH(1), HMGCL(1), HMGCS1(1), HMGCS2(3), HSD17B4(1), MCCC1(5), MCCC2(1), MCEE(1), MUT(4), OXCT1(3), PCCA(3), PCCB(6) 11509302 81 56 81 23 24 27 5 16 9 0 0.49 1.00 1.00 385 LAIRPATHWAY The local acute inflammatory response is mediated by activated macrophages and mast cells or by complement activation. BDK, C3, C5, C6, C7, ICAM1, IL1A, IL6, IL8, ITGA4, ITGAL, ITGB1, ITGB2, SELP, SELPLG, TNF, VCAM1 16 C3(5), C5(1), C6(18), C7(12), ICAM1(2), IL1A(1), IL6(1), ITGA4(4), ITGAL(1), ITGB1(5), ITGB2(5), SELP(11), SELPLG(1), TNF(1), VCAM1(5) 6663608 73 56 73 20 17 28 6 14 8 0 0.35 1.00 1.00 386 OXIDATIVE_PHOSPHORYLATION ATP12A, ATP4B, ATP5E, ATP5O, ATP6AP1, ATP6V0A1, ATP6V0A4, ATP6V0B, ATP6V0C, ATP6V0C, SHMT1, ATP6V0D1, ATP6V0E, ATP6V1A, ATP6V1B1, ATP6V1B2, ATP6V1C1, ATP6V1C2, ATP6V1D, ATP6V1E1, ATP6V1F, ATP6V1G1, ATP6V1G2, ATP6V1G3, ATP6V1H, ATP7A, ATP7B, COX10, COX4I1, COX5A, COX5B, COX6A1, COX6A2, COX6B1, COX6C, COX7A1, COX7A2, COX7B, COX7C, COX8A, NDUFA1, NDUFA10, NDUFA11, NDUFA4, NDUFA5, NDUFA8, NDUFB2, NDUFB4, NDUFB5, NDUFB6, NDUFB7, NDUFS1, NDUFS2, NDUFV1, NDUFV2, PP, PPA2, SDHA, SDHA, SDHAL2, SDHB, UQCRB, UQCRC1, UQCRFS1, UQCRH 60 ATP12A(7), ATP4B(2), ATP6V0A1(4), ATP6V0A4(3), ATP6V0D1(2), ATP6V1A(4), ATP6V1B1(3), ATP6V1B2(1), ATP6V1C1(1), ATP6V1C2(1), ATP6V1D(1), ATP6V1G2(1), ATP6V1G3(1), ATP6V1H(3), ATP7A(9), ATP7B(2), COX10(1), COX4I1(1), COX6B1(1), COX6C(1), NDUFA10(3), NDUFB5(2), NDUFB6(1), NDUFB7(2), NDUFS1(4), NDUFV1(2), NDUFV2(2), PPA2(1), SDHA(3), SDHB(2), UQCRB(1), UQCRFS1(2) 10227702 74 56 74 20 17 21 7 16 13 0 0.33 1.00 1.00 387 PDGFPATHWAY Platelet-derived growth factor (PDGF) receptor is phosphorylated on ligand binding and promotes cell proliferation. CSNK2A1, ELK1, FOS, GRB2, HRAS, JAK1, JUN, MAP2K1, MAP2K4, MAP3K1, MAPK3, MAPK8, PDGFA, PDGFRA, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, RAF1, RASA1, SHC1, SOS1, SRF, STAT1, STAT3, STAT5A 25 CSNK2A1(3), FOS(2), HRAS(4), JAK1(2), JUN(3), MAP2K1(2), MAP2K4(1), MAP3K1(3), MAPK3(1), MAPK8(2), PDGFRA(10), PIK3R1(2), PLCG1(3), PRKCA(5), RAF1(1), RASA1(8), SHC1(2), SOS1(11), SRF(2), STAT1(2), STAT3(2), STAT5A(2) 8718796 73 56 72 17 25 22 5 10 11 0 0.23 1.00 1.00 388 ST_GAQ_PATHWAY G-alpha-q activates phospholipase C, resulting in calcium influx and increasing protein kinase C activity. ADRBK1, AKT1, AKT2, AKT3, BF, DAG1, GNAQ, IKBKG, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, PDK1, PHKA2, PIK3CB, PITX2, PLD1, PLD2, PLD3, VN1R1 26 ADRBK1(1), AKT1(1), AKT3(3), DAG1(2), ITPKA(1), ITPKB(6), ITPR1(6), ITPR2(13), ITPR3(4), NFKB1(2), NFKB2(2), NFKBIB(1), NFKBIE(1), NFKBIL1(2), NFKBIL2(4), PDK1(1), PHKA2(4), PIK3CB(4), PITX2(3), PLD1(7), PLD2(2), PLD3(1), VN1R1(4) 12040988 75 56 74 25 22 26 3 13 11 0 0.50 1.00 1.00 389 GALACTOSE_METABOLISM AKR1B1, B4GALT1, B4GALT2, FBP2, G6PC, GAA, GALE, GALK1, GALK2, GALT, GANAB, GCK, GLA, GLB1, HK1, HK2, HK3, LALBA, LCT, MGAM, PFKM, PFKP, PGM1, PGM3 24 AKR1B1(1), B4GALT1(1), FBP2(1), G6PC(3), GALK2(1), GALT(1), GANAB(5), GCK(5), GLA(2), HK1(3), HK2(5), HK3(5), LCT(18), MGAM(5), PFKM(5), PFKP(2), PGM1(1) 8783054 64 55 64 28 17 23 3 13 8 0 0.84 1.00 1.00 390 TRANSLATION_FACTORS ANKHD1, ANKHD1, MASK_BP3, EEF1A2, EEF1B2, EEF1D, EEF1G, EEF2, EEF2K, EIF1AX, EIF1AY, EIF2AK1, EIF2AK2, EIF2AK3, EIF2B1, EIF2B2, EIF2B3, EIF2B4, EIF2B5, EIF2S1, EIF2S2, EIF2S3, EIF3S1, EIF3S10, EIF3S2, EIF3S3, EIF3S4, EIF3S5, EIF3S6, EIF3S7, EIF3S8, EIF3S9, EIF4A1, EIF4A2, EIF4E, EIF4EBP1, EIF4EBP2, EIF4G1, EIF4G3, EIF5, EIF5A, EIF5B, ETF1, GSPT2, ITGB4BP, KIAA0664, PABPC1, PABPC3, PABPC1, LOC341315, PAIP1, PAIP1, LOC388345, SLC35A4, SUI1, WBSCR1 37 EEF1A2(2), EEF1B2(1), EEF1D(1), EEF1G(2), EEF2(2), EEF2K(5), EIF2AK1(1), EIF2AK3(8), EIF2B1(2), EIF2B2(1), EIF2B3(1), EIF2B4(1), EIF2B5(3), EIF2S2(1), EIF4A1(5), EIF4A2(2), EIF4G1(10), EIF4G3(4), EIF5(3), EIF5B(1), ETF1(2), GSPT2(1), KIAA0664(3), PABPC1(4), PABPC3(9), PAIP1(2), SLC35A4(1) 11769716 78 55 78 24 32 18 3 14 11 0 0.73 1.00 1.00 391 ATRBRCAPATHWAY BRCA1 and 2 block cell cycle progression in response to DNA damage and promote double-stranded break repair; mutations induce breast cancer susceptibility. ATM, ATR, BRCA1, BRCA2, CHEK1, CHEK2, FANCA, FANCC, FANCD2, FANCE, FANCF, FANCG, HUS1, MRE11A, NBS1, RAD1, RAD17, RAD50, RAD51, RAD9A, TP53, TREX1 20 ATM(8), ATR(13), BRCA1(12), BRCA2(12), CHEK1(5), CHEK2(3), FANCA(5), FANCC(2), FANCF(3), FANCG(2), MRE11A(1), RAD1(2), RAD17(2), RAD50(3), RAD51(1), RAD9A(2), TREX1(1) 11581570 77 54 77 15 27 18 5 16 11 0 0.24 1.00 1.00 392 CREBPATHWAY CREB is a transcription factor that binds to cAMP-responsive elements (CREs) to activate transcription in response to extracellular signaling. ADCY1, AKT1, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CREB1, GNAS, GRB2, HRAS, MAPK1, MAPK14, MAPK3, PIK3CA, PIK3R1, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, RAC1, RPS6KA1, RPS6KA5, SOS1 25 ADCY1(10), AKT1(1), CAMK2A(1), CAMK2B(2), CAMK2D(1), CREB1(1), GNAS(6), HRAS(4), MAPK1(1), MAPK14(1), MAPK3(1), PIK3R1(2), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PRKCA(5), RAC1(1), RPS6KA1(2), RPS6KA5(4), SOS1(11) 7175358 64 54 64 14 18 18 6 16 6 0 0.24 1.00 1.00 393 GPCRPATHWAY G-protein coupled receptors activate adenylyl cyclase, which converts ATP to cAMP, to activate second messenger pathways. ADCY1, CALM1, CALM2, CALM3, CREB1, ELK1, FOS, GNAI1, GNAQ, GNAS, GNB1, GNGT1, HRAS, JUN, MAP2K1, MAPK3, NFATC1, NFATC2, NFATC3, NFATC4, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PRKCA, PRKCB1, RAF1, RPS6KA3, SYT1 34 ADCY1(10), CALM2(1), CREB1(1), FOS(2), GNAI1(3), GNAS(6), GNB1(1), HRAS(4), JUN(3), MAP2K1(2), MAPK3(1), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), PLCG1(3), PPP3CA(4), PPP3CB(4), PPP3CC(2), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PRKCA(5), RAF1(1), RPS6KA3(1), SYT1(4) 9325064 83 54 82 25 29 29 7 12 6 0 0.50 1.00 1.00 394 HSA00260_GLYCINE_SERINE_AND_THREONINE_METABOLISM Genes involved in glycine, serine and threonine metabolism ABP1, AGXT, AGXT2, AKR1B10, ALAS1, ALAS2, AMT, AOC2, AOC3, BHMT, CBS, CHDH, CHKA, CHKB, CTH, DAO, DLD, DMGDH, GAMT, GARS, GATM, GCAT, GLDC, GNMT, HSD3B7, MAOA, MAOB, PEMT, PHGDH, PIPOX, PISD, PSAT1, PSPH, RDH11, RDH12, RDH13, RDH14, SARDH, SARS, SARS2, SDS, SHMT1, SHMT2, TARS, TARS2 45 ABP1(5), AGXT(2), AGXT2(2), AKR1B10(2), AOC2(2), AOC3(3), BHMT(2), CBS(4), CHDH(1), CHKA(4), DAO(2), DLD(2), DMGDH(2), GATM(1), GCAT(1), GLDC(4), GNMT(1), PHGDH(2), PIPOX(1), PISD(1), PSAT1(3), PSPH(2), RDH11(1), RDH12(2), RDH13(1), SARDH(6), SARS(2), SARS2(3), SDS(2), TARS(3), TARS2(4) 11568220 73 54 73 24 24 21 4 16 8 0 0.47 1.00 1.00 395 HSA04614_RENIN_ANGIOTENSIN_SYSTEM Genes involved in renin-angiotensin system ACE, ACE2, AGT, AGTR1, AGTR2, ANPEP, CMA1, CPA3, CTSA, CTSG, ENPEP, LNPEP, MAS1, MME, NLN, REN, THOP1 17 ACE(4), ACE2(3), AGT(1), AGTR1(5), AGTR2(3), ANPEP(8), CMA1(2), CPA3(6), CTSA(3), CTSG(3), ENPEP(11), LNPEP(2), MAS1(3), MME(9), NLN(2), THOP1(1) 5682650 66 54 66 22 14 28 2 12 10 0 0.59 1.00 1.00 396 SA_B_CELL_RECEPTOR_COMPLEXES Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases. ATF2, BCR, BLNK, ELK1, FOS, GRB2, HRAS, JUN, LYN, MAP2K1, MAP3K1, MAPK1, MAPK3, MAPK8IP3, PAPPA, RAC1, RPS6KA1, RPS6KA3, SHC1, SOS1, SYK, VAV1, VAV2, VAV3 24 ATF2(3), BCR(2), BLNK(1), FOS(2), HRAS(4), JUN(3), LYN(2), MAP2K1(2), MAP3K1(3), MAPK1(1), MAPK3(1), MAPK8IP3(3), PAPPA(8), RAC1(1), RPS6KA1(2), RPS6KA3(1), SHC1(2), SOS1(11), SYK(1), VAV1(7), VAV2(4), VAV3(1) 8588856 65 54 64 15 20 21 7 12 5 0 0.20 1.00 1.00 397 ACE2PATHWAY Angiotensin-converting enzyme 2 (ACE2) digests the blood-pressure regulator angiotensin II (AGT) ultimately to the vasodilator AGT1-7. ACE2, AGT, AGTR1, AGTR2, CMA1, COL4A1, COL4A2, COL4A3, COL4A4, COL4A5, COL4A6, REN 12 ACE2(3), AGT(1), AGTR1(5), AGTR2(3), CMA1(2), COL4A1(9), COL4A2(10), COL4A3(9), COL4A4(11), COL4A5(2), COL4A6(8) 6890202 63 53 63 20 8 36 1 9 9 0 0.77 1.00 1.00 398 COMPPATHWAY Both the classic and alternative immune complement pathways promote inflammation, foreign cell lysis, and phagocytosis. BF, C1QA, C1QB, C1QG, C1R, C1S, C2, C3, C4A, C4B, C5, C6, C7, C8A, C9, DF, MASP1, MASP2, MBL2 14 C1QA(2), C1QB(2), C1R(3), C1S(3), C2(2), C3(5), C5(1), C6(18), C7(12), C8A(6), C9(3), MASP1(10), MASP2(1), MBL2(4) 5760792 72 53 72 22 18 25 7 13 9 0 0.52 1.00 1.00 399 GHPATHWAY Growth hormone receptors dimerize on ligand binding and activate the JAK2 protein kinase. GH1, GHR, GRB2, HRAS, INS, INSR, IRS1, JAK2, MAP2K1, MAPK1, MAPK3, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, PTPN6, RAF1, RPS6KA1, SHC1, SLC2A4, SOCS1, SOS1, SRF, STAT5A, STAT5B, TCF1 24 GH1(2), GHR(3), HRAS(4), INSR(9), IRS1(6), JAK2(4), MAP2K1(2), MAPK1(1), MAPK3(1), PIK3R1(2), PLCG1(3), PRKCA(5), RAF1(1), RPS6KA1(2), SHC1(2), SLC2A4(2), SOS1(11), SRF(2), STAT5A(2) 8243714 64 53 64 14 15 26 6 10 7 0 0.11 1.00 1.00 400 GLYCINE_SERINE_AND_THREONINE_METABOLISM ABP1, AGXT, AGXT2, ALAS1, ALAS2, AMT, AOC2, AOC3, ATP6V0C, SHMT1, BHMT, CBS, CHDH, CHKA, CHKB, CHKB, CPT1B, CTH, DAO, DLD, DMGDH, GAMT, GARS, GATM, GCAT, GLDC, MAOA, MAOB, PEMT, PISD, PLCB2, PLCG1, PLCG2, PSPH, SARDH, SARS, SHMT1, SHMT2, TARS 37 ABP1(5), AGXT(2), AGXT2(2), AOC2(2), AOC3(3), BHMT(2), CBS(4), CHDH(1), CHKA(4), CPT1B(3), DAO(2), DLD(2), DMGDH(2), GATM(1), GCAT(1), GLDC(4), PISD(1), PLCB2(5), PLCG1(3), PLCG2(4), PSPH(2), SARDH(6), SARS(2), TARS(3) 11341626 66 53 66 22 24 20 2 14 6 0 0.51 1.00 1.00 401 PYRUVATE_METABOLISM ACACA, ACAS2, ACAS2L, ACAT1, ACAT2, ACYP1, ACYP2, ADH5, AKR1B1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, CACH_1, DLAT, DLD, GLO1, GRHPR, HAGH, HAGHL, LDHA, LDHB, LDHC, LDHD, MDH1, MDH2, ME1, ME2, ME3, PC, PCK1, PDHA1, PDHA2, PDHB, PKLR, PKM2 37 ACACA(2), ACAT1(2), ADH5(1), AKR1B1(1), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH9A1(2), DLAT(1), DLD(2), GRHPR(2), HAGHL(1), LDHB(3), LDHC(3), LDHD(6), MDH1(1), MDH2(1), ME1(2), ME2(3), ME3(2), PC(2), PCK1(2), PDHA1(3), PDHA2(8), PKLR(4), PKM2(3) 9908548 67 53 67 31 18 26 3 13 7 0 0.96 1.00 1.00 402 ST_PHOSPHOINOSITIDE_3_KINASE_PATHWAY The phosphoinositide-3 kinase pathway produces the lipid second messenger PIP3 and regulates cell growth, survival, and movement. A1BG, AKT1, AKT2, AKT3, BAD, BTK, CDKN2A, CSL4, DAF, DAPP1, FOXO1A, GRB2, GSK3A, GSK3B, IARS, IGFBP1, INPP5D, P14, PDK1, PIK3CA, PPP1R13B, PSCD3, PTEN, RPS6KA1, RPS6KA2, RPS6KA3, RPS6KB1, SFN, SHC1, SOS1, SOS2, TEC, YWHAB, YWHAE, YWHAG, YWHAH, YWHAQ, YWHAZ 30 A1BG(1), AKT1(1), AKT3(3), BTK(7), GSK3A(3), IARS(3), INPP5D(8), PDK1(1), PPP1R13B(5), RPS6KA1(2), RPS6KA2(6), RPS6KA3(1), RPS6KB1(1), SFN(2), SHC1(2), SOS1(11), SOS2(7), TEC(4), YWHAB(1), YWHAQ(1) 8708116 70 53 70 17 23 21 3 10 13 0 0.32 1.00 1.00 403 VEGFPATHWAY Vascular endothelial growth factor (VEGF) is upregulated by hypoxic conditions and promotes normal blood vessel formation and angiogenesis related to tumor growth or cardiac disease. ARNT, EIF1, EIF1A, EIF2B1, EIF2B2, EIF2B3, EIF2B4, EIF2B5, EIF2S1, EIF2S2, EIF2S3, ELAVL1, FLT1, FLT4, HIF1A, HRAS, KDR, NOS3, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, PTK2, PXN, SHC1, VEGF, VHL 24 ARNT(1), EIF2B1(2), EIF2B2(1), EIF2B3(1), EIF2B4(1), EIF2B5(3), EIF2S2(1), ELAVL1(1), FLT1(11), FLT4(5), HIF1A(1), HRAS(4), KDR(15), NOS3(2), PIK3R1(2), PLCG1(3), PRKCA(5), PTK2(6), PXN(3), SHC1(2), VHL(1) 8544178 71 53 71 27 24 24 4 9 10 0 0.81 1.00 1.00 404 ALKPATHWAY Activin receptor-like kinase 3 (ALK3) is required during gestation for cardiac muscle development. ACVR1, APC, ATF2, AXIN1, BMP10, BMP2, BMP4, BMP5, BMP7, BMPR1A, BMPR2, CHRD, CTNNB1, DVL1, FZD1, GATA4, GSK3B, MADH1, MADH4, MADH5, MADH6, MAP3K7, MEF2C, MYL2, NKX2-5, NOG, NPPA, NPPB, RFC1, TCF1, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, TGFBR3, WNT1 32 APC(9), ATF2(3), BMP10(1), BMP4(1), BMP5(8), BMPR1A(3), BMPR2(1), CHRD(6), CTNNB1(4), DVL1(3), FZD1(1), MAP3K7(2), MEF2C(4), MYL2(2), NKX2-5(2), NPPB(1), RFC1(1), TGFB1(1), TGFB2(3), TGFBR2(3), TGFBR3(8), WNT1(1) 9765792 68 52 68 20 22 22 4 11 9 0 0.55 1.00 1.00 405 AMINOACYL_TRNA_BIOSYNTHESIS AARS, CARS, DARS, EPRS, FARS2, FARSLB, GARS, HARS, HARSL, IARS, KARS, LARS, LARS2, MARS, MARS2, NARS, QARS, RARS, SARS, TARS, WARS, WARS2, YARS 21 AARS(2), CARS(8), DARS(1), EPRS(12), FARS2(2), HARS(2), IARS(3), KARS(2), LARS(1), LARS2(3), MARS(1), NARS(4), RARS(4), SARS(2), TARS(3), WARS(4), WARS2(2), YARS(1) 8566428 57 52 57 16 22 16 3 11 5 0 0.48 1.00 1.00 406 CIRCADIAN_EXERCISE ARNTL, AZIN1, BTG1, C10orf110, C1orf1, CBX3, CEBPB, CLDN5, CLOCK, CRY1, CRY2, DAZAP2, DAZAP2, LOC401029, DNAJA1, EIF4G2, ETV6, G0S2, GENX_3414, GFRA1, GSTM3, GSTP1, HERPUD1, HLA_DMA, HSPA8, IDI1, KLF9, MAP3K7IP2, MYF6, NCKAP1, NCOA4, NR1D2, OAZIN, PER1, PER2, PIGF, PPP1R3C, PPP2CB, PSMA4, PURA, SF3A3, SUMO3, TOB1, TUBB3, UCP3, UGP2, VAPA, ZFR 40 ARNTL(2), AZIN1(1), BTG1(1), CLDN5(1), CLOCK(5), CRY1(2), CRY2(2), EIF4G2(3), ETV6(4), GSTM3(1), GSTP1(1), HERPUD1(1), HSPA8(3), IDI1(1), KLF9(1), MYF6(1), NCKAP1(7), NR1D2(1), PER1(5), PER2(2), PIGF(1), PPP1R3C(2), PSMA4(1), PURA(1), SF3A3(2), TUBB3(2), UCP3(3), UGP2(4), VAPA(1), ZFR(5) 9847138 67 52 67 17 15 19 5 18 10 0 0.40 1.00 1.00 407 COMPLEMENT_ACTIVATION_CLASSICAL C1QA, C1QB, C1QG, C1R, C1S, C2, C3, C4A, C4B, C5, C6, C7, C8A, C8B, C9, DAF, MASP1 13 C1QA(2), C1QB(2), C1R(3), C1S(3), C2(2), C3(5), C5(1), C6(18), C7(12), C8A(6), C8B(4), C9(3), MASP1(10) 5611094 71 52 71 24 17 26 7 13 8 0 0.68 1.00 1.00 408 RHOPATHWAY RhoA is a G protein whose active form stabilizes actin structures such as focal adhesions and activates Rock1, which phosphorylates myosin light chains. ACTR2, ACTR3, ARHA, ARHGAP1, ARHGAP4, ARHGAP5, ARHGAP6, ARHGEF1, ARHGEF11, ARHGEF5, ARPC1A, ARPC1B, ARPC2, ARPC3, ARPC4, BAIAP2, CFL1, DIAPH1, GSN, LIMK1, MYL2, MYLK, OPHN1, PFN1, PIP5K1A, PIP5K1B, PPP1R12B, ROCK1, SRC, TLN1, VCL 30 ARHGAP1(1), ARHGAP4(2), ARHGAP5(2), ARHGAP6(5), ARHGEF1(2), ARHGEF11(8), ARHGEF5(2), ARPC1A(4), BAIAP2(2), CFL1(2), DIAPH1(1), GSN(2), MYL2(2), MYLK(8), OPHN1(3), PIP5K1A(4), PIP5K1B(2), PPP1R12B(5), ROCK1(5), TLN1(6), VCL(2) 12227354 70 52 68 22 28 21 3 13 5 0 0.58 1.00 1.00 409 ST_ERK1_ERK2_MAPK_PATHWAY The Erk1 and Erk2 MAP kinase pathways are regulated by Raf, Mos, and Tpl-2. ARAF1, ATF1, BAD, BRAF, COPEB, CREB1, CREB3, CREB5, DUSP4, DUSP6, DUSP9, EEF2K, EIF4E, GRB2, HTATIP, MAP2K1, MAP2K2, MAP3K8, MAPK1, MAPK3, MKNK1, MKNK2, MOS, NFKB1, RAP1A, RPS6KA1, RPS6KA2, RPS6KA3, SHC1, SOS1, SOS2, TRAF3 29 BRAF(8), CREB1(1), CREB3(2), CREB5(3), DUSP4(2), DUSP6(2), DUSP9(2), EEF2K(5), MAP2K1(2), MAP2K2(1), MAPK1(1), MAPK3(1), MKNK2(1), MOS(4), NFKB1(2), RAP1A(1), RPS6KA1(2), RPS6KA2(6), RPS6KA3(1), SHC1(2), SOS1(11), SOS2(7), TRAF3(3) 7935596 70 52 69 14 22 19 6 9 14 0 0.12 1.00 1.00 410 VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION ACAA1, ACAA2, ACADL, ACADM, ACADS, ACADSB, ACAT1, ACAT2, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH6A1, ALDH9A1, AOX1, BCAT1, BCKDHA, BCKDHB, ECHS1, EHHADH, HADHA, HADHB, HIBADH, HMGCL, IVD, MCCC1, MCCC2, MCEE, MUT, OXCT1, PCCA, PCCB, SDS 36 ACAA1(1), ACAA2(1), ACADL(2), ACADM(1), ACADS(2), ACAT1(2), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH6A1(1), ALDH9A1(2), AOX1(13), BCAT1(1), BCKDHB(2), ECHS1(1), EHHADH(1), HADHA(2), HADHB(3), HIBADH(1), HMGCL(1), MCCC1(5), MCCC2(1), MCEE(1), MUT(4), OXCT1(3), PCCA(3), PCCB(6), SDS(2) 9621612 72 52 72 18 20 25 5 16 6 0 0.31 1.00 1.00 411 VITCBPATHWAY Vitamin C (ascorbic acid), in addition to its role in collagen modification, serves as an antioxidant and is imported into cells by Svct2 in the brain and Svct1 in intestinal epithelium. COL4A1, COL4A2, COL4A3, COL4A4, COL4A5, COL4A6, P4HB, SLC23A1, SLC23A2, SLC2A1, SLC2A3 11 COL4A1(9), COL4A2(10), COL4A3(9), COL4A4(11), COL4A5(2), COL4A6(8), P4HB(4), SLC23A1(2), SLC23A2(2), SLC2A1(1), SLC2A3(5) 6856738 63 52 63 18 11 33 1 9 9 0 0.59 1.00 1.00 412 HSA00040_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS Genes involved in pentose and glucuronate interconversions AKR1B1, DCXR, GUSB, RPE, UGDH, UGP2, UGT1A1, UGT1A10, UGT1A3, UGT1A4, UGT1A5, UGT1A6, UGT1A7, UGT1A8, UGT1A9, UGT2A1, UGT2A3, UGT2B10, UGT2B11, UGT2B15, UGT2B17, UGT2B28, UGT2B4, UGT2B7, XYLB 25 AKR1B1(1), GUSB(2), UGDH(2), UGP2(4), UGT1A1(1), UGT1A10(2), UGT1A3(1), UGT1A4(1), UGT1A5(3), UGT1A6(1), UGT1A7(2), UGT1A8(4), UGT1A9(3), UGT2A1(3), UGT2A3(6), UGT2B10(3), UGT2B11(5), UGT2B15(3), UGT2B28(5), UGT2B4(8), UGT2B7(2), XYLB(1) 7360478 63 51 63 15 12 21 7 18 5 0 0.30 1.00 1.00 413 HSA00360_PHENYLALANINE_METABOLISM Genes involved in phenylalanine metabolism ABP1, ALDH1A3, ALDH3A1, ALDH3B1, ALDH3B2, AOC2, AOC3, ARD1A, DDC, EPX, ESCO1, ESCO2, GOT1, GOT2, HPD, LPO, LYCAT, MAOA, MAOB, MIF, MPO, MYST3, MYST4, NAT5, NAT6, PNPLA3, PRDX6, SH3GLB1, TAT, TPO 27 ABP1(5), ALDH3A1(2), ALDH3B2(1), AOC2(2), AOC3(3), DDC(4), EPX(4), ESCO1(2), ESCO2(1), GOT2(3), HPD(1), LPO(2), MPO(4), MYST3(11), MYST4(4), PNPLA3(1), PRDX6(2), SH3GLB1(1), TAT(1), TPO(10) 9147420 64 51 64 34 12 21 5 20 6 0 0.99 1.00 1.00 414 HSA00590_ARACHIDONIC_ACID_METABOLISM Genes involved in arachidonic acid metabolism AKR1C3, ALOX12, ALOX12B, ALOX15, ALOX15B, ALOX5, CBR1, CBR3, CYP2B6, CYP2C18, CYP2C19, CYP2C8, CYP2C9, CYP2E1, CYP2J2, CYP2U1, CYP4A11, CYP4A22, CYP4F2, CYP4F3, DHRS4, EPHX2, GGT1, GGTL3, GGTL4, GPX1, GPX2, GPX3, GPX4, GPX5, GPX6, GPX7, LTA4H, LTC4S, PGDS, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PTGDS, PTGES, PTGES2, PTGIS, PTGS1, PTGS2, TBXAS1 51 AKR1C3(1), ALOX12B(1), ALOX15(3), ALOX15B(1), CYP2B6(4), CYP2C18(2), CYP2C19(8), CYP2C8(2), CYP2C9(3), CYP2J2(1), CYP4A22(2), CYP4F2(3), CYP4F3(2), DHRS4(1), EPHX2(2), GGT1(1), GPX5(2), GPX6(2), LTA4H(2), PLA2G2A(1), PLA2G2E(2), PLA2G2F(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5), PTGES(1), PTGS1(2), TBXAS1(2) 10403032 70 51 70 31 23 21 9 9 8 0 0.88 1.00 1.00 415 PITX2PATHWAY The bicoid-related transcription factor Pitx2 is activated by Wnt binding to the Frizzled receptor and induces tissue-specific cell proliferation. APC, AXIN1, CREBBP, CTNNB1, DVL1, EP300, FZD1, GSK3B, HDAC1, HTATIP, LDB1, LEF1, PITX2, PPARBP, TRRAP, WNT1 14 APC(9), CREBBP(17), CTNNB1(4), DVL1(3), EP300(9), FZD1(1), HDAC1(2), LEF1(3), PITX2(3), TRRAP(14), WNT1(1) 8883446 66 51 65 14 13 24 5 15 9 0 0.15 1.00 1.00 416 SIG_IL4RECEPTOR_IN_B_LYPHOCYTES Genes related to IL4 rceptor signaling in B lymphocytes AKT1, AKT2, AKT3, BAD, BCL2, GRB2, GSK3A, GSK3B, IL4R, IRS1, IRS2, JAK1, JAK3, MAP4K1, MAPK1, MAPK3, PDK1, PIK3CA, PIK3CD, PIK3R1, PPP1R13B, RAF1, SHC1, SOCS1, SOS1, SOS2, STAT6 26 AKT1(1), AKT3(3), GSK3A(3), IL4R(2), IRS1(6), IRS2(2), JAK1(2), JAK3(7), MAP4K1(3), MAPK1(1), MAPK3(1), PDK1(1), PIK3CD(4), PIK3R1(2), PPP1R13B(5), RAF1(1), SHC1(2), SOS1(11), SOS2(7), STAT6(2) 9182664 66 51 66 25 16 23 2 15 10 0 0.81 1.00 1.00 417 AMIPATHWAY Endogenous anti-thrombosis pathways are overwhelmed in plaque-narrowed blood vessels, resulting in potentially lethal myocardial infarction. ADCY1, CD3D, CD3E, CD3G, CD3Z, CD4, CREBBP, CSK, GNAS, GNB1, GNGT1, HLA-DRA, HLA-DRB1, LCK, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PTPRC, TRA@, TRB@, ZAP70 21 ADCY1(10), CD3D(1), CD4(1), CREBBP(17), GNAS(6), GNB1(1), HLA-DRA(1), HLA-DRB1(2), LCK(3), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PTPRC(7), ZAP70(4) 6161470 63 50 63 22 18 18 6 15 6 0 0.76 1.00 1.00 418 CSKPATHWAY Csk inhibits T-cell activation by phosphorylating Lck; Csk is regulated by cAMP-dependent kinases and is opposed by the T-cell activator CD45. ADCY1, CD3D, CD3E, CD3G, CD3Z, CD4, CREBBP, CSK, GNAS, GNB1, GNGT1, HLA-DRA, HLA-DRB1, LCK, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PTPRC, TRA@, TRB@, ZAP70 21 ADCY1(10), CD3D(1), CD4(1), CREBBP(17), GNAS(6), GNB1(1), HLA-DRA(1), HLA-DRB1(2), LCK(3), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), PTPRC(7), ZAP70(4) 6161470 63 50 63 22 18 18 6 15 6 0 0.76 1.00 1.00 419 HSA00051_FRUCTOSE_AND_MANNOSE_METABOLISM Genes involved in fructose and mannose metabolism AKR1B1, AKR1B10, ALDOA, ALDOB, ALDOC, FBP1, FBP2, FPGT, FUK, GMDS, GMPPA, GMPPB, HK1, HK2, HK3, HSD3B7, KHK, LHPP, MPI, MTMR1, MTMR2, MTMR6, PFKFB1, PFKFB2, PFKFB3, PFKFB4, PFKL, PFKM, PFKP, PGM2, PHPT1, PMM1, PMM2, RDH11, RDH12, RDH13, RDH14, SORD, TPI1, TSTA3, UGCGL1, UGCGL2 40 AKR1B1(1), AKR1B10(2), ALDOA(1), ALDOB(2), FBP2(1), FPGT(4), FUK(2), GMPPA(2), HK1(3), HK2(5), HK3(5), KHK(2), MPI(1), MTMR1(1), MTMR2(2), MTMR6(5), PFKFB1(4), PFKL(2), PFKM(5), PFKP(2), PGM2(4), PMM1(1), RDH11(1), RDH12(2), RDH13(1), SORD(1), TPI1(3) 10098652 65 50 65 22 14 24 5 14 8 0 0.54 1.00 1.00 420 HSA00530_AMINOSUGARS_METABOLISM Genes involved in aminosugars metabolism AMDHD2, CHIA, CHIT1, CMAS, CTBS, CYB5R1, CYB5R3, GFPT1, GFPT2, GNE, GNPDA1, GNPDA2, GNPNAT1, HEXA, HEXB, HK1, HK2, HK3, LHPP, MTMR1, MTMR2, MTMR6, NAGK, NANS, NPL, PGM3, PHPT1, RENBP, UAP1 29 AMDHD2(2), CHIA(5), CHIT1(5), CMAS(2), CTBS(4), CYB5R1(1), GFPT1(1), GFPT2(3), GNE(2), GNPDA2(4), HEXA(5), HK1(3), HK2(5), HK3(5), MTMR1(1), MTMR2(2), MTMR6(5), NAGK(2), NPL(2), RENBP(2), UAP1(2) 7669842 63 50 63 17 10 28 3 11 11 0 0.36 1.00 1.00 421 LYSINE_DEGRADATION AADAT, AASDH, AASDHPPT, AASS, ACAT1, ACAT2, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, ATP6V0C, SHMT1, BAT8, BBOX1, DLST, DLSTP, DOT1L, ECHS1, EHHADH, EHMT1, EHMT2, GCDH, HADHA, PLOD1, PLOD2, PLOD3, SDS, SHMT1, SHMT2, TMLHE 31 AADAT(1), AASDH(6), AASDHPPT(1), AASS(11), ACAT1(2), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH9A1(2), BBOX1(2), DLST(1), DOT1L(5), ECHS1(1), EHHADH(1), EHMT1(5), EHMT2(1), GCDH(2), HADHA(2), PLOD1(4), PLOD2(5), PLOD3(5), SDS(2), TMLHE(1) 9971382 70 50 70 30 13 25 7 16 9 0 0.92 1.00 1.00 422 WNTPATHWAY The Wnt glycoprotein binds to membrane-bound receptors such as Frizzled to activate a number of signaling pathways, including that of beta-catenin. APC, AXIN1, BTRC, CCND1, CREBBP, CSNK1A1, CSNK1D, CSNK2A1, CTBP1, CTNNB1, DVL1, FRAT1, FZD1, GSK3B, HDAC1, MADH4, MAP3K7, MAP3K7IP1, MYC, NLK, PPARD, PPP2CA, TCF1, TLE1, WIF1, WNT1 22 APC(9), BTRC(1), CCND1(1), CREBBP(17), CSNK1A1(2), CSNK1D(2), CSNK2A1(3), CTBP1(2), CTNNB1(4), DVL1(3), FZD1(1), HDAC1(2), MAP3K7(2), MYC(1), NLK(2), PPARD(2), TLE1(4), WIF1(5), WNT1(1) 7918330 64 50 64 14 19 22 6 9 8 0 0.19 1.00 1.00 423 DCPATHWAY Dendritic cells internalize and present antigen, after which they migrate to lymphocyte-rich tissues and induce T and B cell differentiation. ANPEP, CD2, CD33, CD5, CD7, CSF2, IFNA1, IFNB1, IFNG, IL10, IL12A, IL12B, IL13, IL3, IL4, IL5, ITGAX, TLR2, TLR4, TLR7, TLR9, TNFRSF5 21 ANPEP(8), CD2(1), CD33(3), CD5(2), CD7(1), IFNA1(1), IFNB1(2), IFNG(1), IL10(2), IL12A(1), IL12B(3), IL3(1), IL4(2), ITGAX(9), TLR2(3), TLR4(10), TLR7(3), TLR9(2) 4965488 55 49 54 19 10 23 3 13 6 0 0.56 1.00 1.00 424 HSA00640_PROPANOATE_METABOLISM Genes involved in propanoate metabolism ABAT, ACACA, ACACB, ACADM, ACAT1, ACAT2, ACSS1, ACSS2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH6A1, ALDH7A1, ALDH9A1, ECHS1, EHHADH, HADHA, HIBCH, LDHA, LDHAL6A, LDHAL6B, LDHB, LDHC, LOC283398, MCEE, MLYCD, MUT, PCCA, PCCB, SUCLA2, SUCLG1, SUCLG2 33 ABAT(3), ACACA(2), ACACB(9), ACADM(1), ACAT1(2), ACSS1(3), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH6A1(1), ALDH7A1(1), ALDH9A1(2), ECHS1(1), EHHADH(1), HADHA(2), HIBCH(1), LDHAL6A(2), LDHAL6B(1), LDHB(3), LDHC(3), MCEE(1), MLYCD(1), MUT(4), PCCA(3), PCCB(6), SUCLA2(2), SUCLG2(1) 10581032 62 49 62 21 20 18 4 11 9 0 0.70 1.00 1.00 425 KREBS_TCA_CYCLE ACO2, CGI_48, CS, DLAT, DLD, DLST, DLST, DLSTP, FH, IDH2, IDH3A, IDH3B, IDH3G, KIAA1348, MDH1, MDH2, OGDH, PC, PDHA1, PDHA2, PDHB, PDHX, PDK1, PDK2, PDK3, PDK4, PDP2, PPM2C, SDHA, SDHA, SDHAL2, SDHB, SDHC, SDHD, SUCLA2, SUCLG1, SUCLG2, WDR50 30 ACO2(3), DLAT(1), DLD(2), DLST(1), FH(2), IDH3A(1), IDH3B(4), IDH3G(2), MDH1(1), MDH2(1), OGDH(3), PC(2), PDHA1(3), PDHA2(8), PDHX(1), PDK1(1), PDK2(2), PDK3(3), PDK4(3), PDP2(4), SDHA(3), SDHB(2), SUCLA2(2), SUCLG2(1) 7571230 56 49 56 21 12 22 3 13 6 0 0.78 1.00 1.00 426 RAC1PATHWAY Rac-1 is a Rho family G protein that stimulates formation of actin-dependent structures such as filopodia and lamellopodia. ARFIP2, CDK5, CDK5R1, CFL1, CHN1, LIMK1, MAP3K1, MYL2, MYLK, NCF2, PAK1, PDGFRA, PIK3CA, PIK3R1, PLD1, PPP1R12B, RAC1, RALBP1, RPS6KB1, TRIO, VAV1, WASF1 21 ARFIP2(1), CDK5(1), CDK5R1(1), CFL1(2), CHN1(2), MAP3K1(3), MYL2(2), MYLK(8), NCF2(3), PAK1(2), PDGFRA(10), PIK3R1(2), PLD1(7), PPP1R12B(5), RAC1(1), RALBP1(1), RPS6KB1(1), TRIO(8), VAV1(7), WASF1(1) 8771484 68 49 68 22 25 24 4 12 3 0 0.60 1.00 1.00 427 CCR3PATHWAY CCR3 is a G-protein coupled receptor that recruits eosinophils to inflammation sites via chemokine ligands. ARHA, CCL11, CCR3, CFL1, GNAQ, GNAS, GNB1, GNGT1, HRAS, LIMK1, MAP2K1, MAPK1, MAPK3, MYL2, NOX1, PIK3C2G, PLCB1, PPP1R12B, PRKCA, PRKCB1, PTK2, RAF1, ROCK2 21 CCR3(1), CFL1(2), GNAS(6), GNB1(1), HRAS(4), MAP2K1(2), MAPK1(1), MAPK3(1), MYL2(2), NOX1(2), PIK3C2G(8), PLCB1(8), PPP1R12B(5), PRKCA(5), PTK2(6), RAF1(1), ROCK2(3) 6814908 58 48 58 21 14 24 4 11 5 0 0.86 1.00 1.00 428 CELL2CELLPATHWAY Epithelial cell adhesion proteins such as cadherins transduce signals into the cell via catenins, which alter cell shape and motility. ACTN1, ACTN2, ACTN3, BCAR1, CSK, CTNNA1, CTNNA2, CTNNB1, PECAM1, PTK2, PXN, SRC, VCL 13 ACTN1(2), ACTN2(9), ACTN3(2), BCAR1(6), CTNNA1(1), CTNNA2(27), CTNNB1(4), PTK2(6), PXN(3), VCL(2) 5103438 62 48 62 29 17 27 3 11 4 0 0.95 1.00 1.00 429 GAMMA_HEXACHLOROCYCLOHEXANE_DEGRADATION ACP1, ACP2, ACP5, ACPP, ACPT, ALPI, ALPL, ALPP, ALPP, ALPPL2, ALPPL2, CYP19A1, CYP1A1, CYP1A2, CYP2A6, CYP2A6, CYP2A7, CYP2A7P1, CYP2A13, CYP2B6, CYP2C18, CYP2C19, CYP2C19, CYP2C9, CYP2C8, CYP2C9, CYP2D6, CYP2E1, CYP2F1, CYP2J2, CYP3A4, CYP3A5, CYP3A7, CYP4B1, CYP4F8, CYP51A1, PON1 31 ACP1(2), ACP2(1), ACPT(1), ALPL(3), ALPP(3), ALPPL2(1), CYP19A1(4), CYP1A1(7), CYP1A2(1), CYP2A13(1), CYP2A6(5), CYP2A7(1), CYP2B6(4), CYP2C18(2), CYP2C19(8), CYP2C8(2), CYP2C9(3), CYP2D6(3), CYP2F1(3), CYP2J2(1), CYP3A4(1), CYP3A7(1), CYP4B1(3), CYP4F8(3), PON1(6) 7861014 70 48 70 32 21 20 6 19 4 0 0.93 1.00 1.00 430 HSA00120_BILE_ACID_BIOSYNTHESIS Genes involved in bile acid biosynthesis ACAA1, ACAA2, ACAD8, ACAD9, ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, AKR1B10, AKR1C4, AKR1D1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, BAAT, CEL, CYP27A1, CYP7A1, HADHB, HSD3B7, LIPA, RDH11, RDH12, RDH13, RDH14, SLC27A5, SOAT1, SOAT2, SRD5A1, SRD5A2 38 ACAA1(1), ACAA2(1), ACAD8(2), ACAD9(3), ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH5(1), ADH7(1), ADHFE1(2), AKR1B10(2), AKR1C4(1), AKR1D1(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH7A1(1), ALDH9A1(2), BAAT(2), CEL(1), CYP27A1(1), CYP7A1(5), HADHB(3), LIPA(2), RDH11(1), RDH12(2), RDH13(1), SLC27A5(4), SOAT1(1), SOAT2(2), SRD5A1(2), SRD5A2(2) 8497542 62 48 62 19 15 24 0 15 8 0 0.38 1.00 1.00 431 HSA00510_N_GLYCAN_BIOSYNTHESIS Genes involved in N-glycan biosynthesis ALG1, ALG10, ALG10B, ALG11, ALG12, ALG13, ALG14, ALG2, ALG3, ALG5, ALG6, ALG8, ALG9, B4GALT1, B4GALT2, B4GALT3, DAD1, DDOST, DHDDS, DOLPP1, DPAGT1, DPM1, FUT8, GANAB, GCS1, MAN1A1, MAN1A2, MAN1B1, MAN1C1, MAN2A1, MGAT1, MGAT2, MGAT3, MGAT4A, MGAT4B, MGAT5, MGAT5B, RFT1, RPN1, RPN2, ST6GAL1, STT3B 41 ALG1(1), ALG10B(1), ALG12(1), ALG13(8), ALG2(3), ALG5(2), ALG6(2), ALG8(1), ALG9(1), B4GALT1(1), B4GALT3(3), DDOST(1), DPM1(1), FUT8(2), GANAB(5), MAN1A1(4), MAN1A2(5), MAN1C1(3), MAN2A1(4), MGAT1(2), MGAT2(2), MGAT3(4), MGAT4A(2), MGAT4B(1), MGAT5(5), MGAT5B(4), RPN1(1), ST6GAL1(2), STT3B(1) 11411046 73 48 73 28 29 26 2 9 7 0 0.78 1.00 1.00 432 HSA00760_NICOTINATE_AND_NICOTINAMIDE_METABOLISM Genes involved in nicotinate and nicotinamide metabolism AOX1, BST1, C9orf95, CD38, ENPP1, ENPP3, NADK, NADSYN1, NMNAT1, NMNAT2, NMNAT3, NNMT, NNT, NP, NT5C, NT5C1A, NT5C1B, NT5C2, NT5C3, NT5E, NT5M, NUDT12, PBEF1, QPRT 22 AOX1(13), BST1(1), C9orf95(1), CD38(2), ENPP1(8), ENPP3(6), NADK(1), NADSYN1(7), NMNAT2(2), NMNAT3(1), NNT(10), NT5C1A(2), NT5C1B(2), NT5C2(3), NT5C3(3), NT5E(2), NUDT12(2) 5777880 66 48 66 16 19 25 3 11 8 0 0.22 1.00 1.00 433 PROSTAGLANDIN_AND_LEUKOTRIENE_METABOLISM AKR1C3, ALOX12, ALOX15, ALOX5, CBR1, CBR3, CYP4F2, CYP4F3, CYP4F3, CYP4F2, EPX, GGT1, LPO, LTA4H, MPO, PGDS, PLA2G1B, PLA2G2A, PLA2G2E, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PRDX1, PRDX2, PRDX5, PRDX6, PTGDS, PTGES2, PTGIS, PTGS1, PTGS2, TBXAS1, TPO 31 AKR1C3(1), ALOX15(3), CYP4F2(3), CYP4F3(2), EPX(4), GGT1(1), LPO(2), LTA4H(2), MPO(4), PLA2G2A(1), PLA2G2E(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5), PRDX1(1), PRDX6(2), PTGS1(2), TBXAS1(2), TPO(10) 7417794 59 48 59 28 13 21 9 11 5 0 0.93 1.00 1.00 434 PYK2PATHWAY Pyk2 and Rac1 stimulate the JNK cascade and activate MKK3, which activates p38. BCAR1, CALM1, CALM2, CALM3, CRKL, GNAQ, GRB2, HRAS, JUN, MAP2K1, MAP2K2, MAP2K3, MAP2K4, MAP3K1, MAPK1, MAPK14, MAPK3, MAPK8, PAK1, PLCG1, PRKCA, PRKCB1, PTK2B, RAC1, RAF1, SHC1, SOS1, SRC, SYT1 28 BCAR1(6), CALM2(1), CRKL(1), HRAS(4), JUN(3), MAP2K1(2), MAP2K2(1), MAP2K3(3), MAP2K4(1), MAP3K1(3), MAPK1(1), MAPK14(1), MAPK3(1), MAPK8(2), PAK1(2), PLCG1(3), PRKCA(5), RAC1(1), RAF1(1), SHC1(2), SOS1(11), SYT1(4) 7603448 59 48 58 20 16 20 5 14 4 0 0.73 1.00 1.00 435 TOLLPATHWAY Toll-like receptors are activated by bacterial lipoproteins, lipopolysaccharides, and other surface molecules, and activate pro-inflammatory factors such as NF-kB. CD14, CHUK, ELK1, FOS, IKBKB, IKBKG, IRAK1, JUN, LY96, MAP2K3, MAP2K4, MAP2K6, MAP3K1, MAP3K14, MAP3K7, MAP3K7IP1, MAP3K7IP2, MAPK14, MAPK8, MYD88, NFKB1, NFKBIA, PGLYRP, PPARA, PRKR, RELA, SITPEC, TIRAP, TLR10, TLR2, TLR3, TLR4, TLR6, TLR7, TLR9, TOLLIP, TRAF6 31 CD14(2), CHUK(2), FOS(2), IKBKB(2), IRAK1(3), JUN(3), MAP2K3(3), MAP2K4(1), MAP2K6(2), MAP3K1(3), MAP3K14(1), MAP3K7(2), MAPK14(1), MAPK8(2), NFKB1(2), PPARA(1), RELA(3), TLR2(3), TLR3(2), TLR4(10), TLR7(3), TLR9(2), TOLLIP(1), TRAF6(5) 9740516 61 48 60 28 18 20 5 9 9 0 0.96 1.00 1.00 436 ALANINE_AND_ASPARTATE_METABOLISM AARS, ABAT, ADSL, ADSS, AGXT, AGXT2, ASL, ASNS, ASPA, ASS, CAD, CRAT, DARS, DDO, GAD1, GAD2, GOT1, GOT2, GPT, GPT2, NARS, PC 21 AARS(2), ABAT(3), ADSL(1), ADSS(1), AGXT(2), AGXT2(2), ASL(4), ASNS(5), CAD(10), DARS(1), DDO(2), GAD1(5), GAD2(6), GOT2(3), GPT(1), GPT2(4), NARS(4), PC(2) 6992018 58 47 58 21 17 19 2 14 6 0 0.66 1.00 1.00 437 BETA_ALANINE_METABOLISM ABAT, ABP1, ACADL, ACADM, ACADSB, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, AOC2, AOC3, CNDP1, DPYD, DPYS, ECHS1, EHHADH, GAD1, GAD2, HADHA, MLYCD, SDS, SMS, UPB1 27 ABAT(3), ABP1(5), ACADL(2), ACADM(1), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH9A1(2), AOC2(2), AOC3(3), CNDP1(3), DPYD(8), DPYS(6), ECHS1(1), EHHADH(1), GAD1(5), GAD2(6), HADHA(2), MLYCD(1), SDS(2), SMS(2) 7762936 65 47 65 25 14 26 4 13 8 0 0.78 1.00 1.00 438 ECMPATHWAY Extracellular matrix induces integrin-mediated FAK phosphorylation in epithelial cells, leading to PI3 and MAP kinase activation and actin reorganization. ARHA, ARHGAP5, DIAPH1, FYN, GSN, HRAS, ITGA1, ITGB1, MAP2K1, MAPK1, MAPK3, MYL2, MYLK, PFN1, PIK3CA, PIK3R1, PTK2, PXN, RAF1, ROCK1, SHC1, SRC, TLN1 21 ARHGAP5(2), DIAPH1(1), FYN(5), GSN(2), HRAS(4), ITGA1(4), ITGB1(5), MAP2K1(2), MAPK1(1), MAPK3(1), MYL2(2), MYLK(8), PIK3R1(2), PTK2(6), PXN(3), RAF1(1), ROCK1(5), SHC1(2), TLN1(6) 9401960 62 47 62 17 21 21 6 11 3 0 0.45 1.00 1.00 439 FASPATHWAY Binding of the Fas ligand to the Fas receptor induces caspase activation and consequent apoptosis in the Fas-expressing cell. ADPRT, ARHGDIB, CASP10, CASP3, CASP6, CASP7, CASP8, CFLAR, DAXX, DFFA, DFFB, FADD, FAF1, JUN, LMNA, LMNB1, LMNB2, MAP2K4, MAP3K1, MAP3K7, MAPK8, PAK1, PAK2, PRKDC, PTPN13, RB1, RIPK2, SPTAN1, TNFRSF6, TNFSF6 26 ARHGDIB(2), CASP10(3), CASP7(2), CASP8(2), CFLAR(1), DAXX(3), DFFB(2), FADD(1), FAF1(1), JUN(3), LMNA(1), MAP2K4(1), MAP3K1(3), MAP3K7(2), MAPK8(2), PAK1(2), PAK2(1), PRKDC(12), PTPN13(9), RIPK2(2), SPTAN1(4) 10689434 59 47 58 16 20 16 1 12 10 0 0.49 1.00 1.00 440 GSK3PATHWAY Bacterial lipopolysaccharide activates AKT to promote the survival and activation of macrophages and inhibits Gsk3-beta to promote beta-catenin accumulation in the nucleus. AKT1, APC, AXIN1, CCND1, CD14, CTNNB1, DVL1, FZD1, GJA1, GNAI1, GSK3B, IRAK1, LBP, LEF1, LY96, MYD88, NFKB1, PDPK1, PIK3CA, PIK3R1, PPP2CA, PRKR, RELA, TIRAP, TLR4, TOLLIP, WNT1 25 AKT1(1), APC(9), CCND1(1), CD14(2), CTNNB1(4), DVL1(3), FZD1(1), GJA1(4), GNAI1(3), IRAK1(3), LBP(4), LEF1(3), NFKB1(2), PDPK1(1), PIK3R1(2), RELA(3), TLR4(10), TOLLIP(1), WNT1(1) 7638514 58 47 58 17 18 13 10 9 8 0 0.59 1.00 1.00 441 HSA04120_UBIQUITIN_MEDIATED_PROTEOLYSIS Genes involved in ubiquitin mediated proteolysis ANAPC1, ANAPC10, ANAPC11, ANAPC2, ANAPC4, ANAPC5, ANAPC7, BTRC, CDC16, CDC20, CDC23, CDC26, CDC27, CUL1, CUL2, CUL3, FBXW11, FBXW7, FZR1, ITCH, LOC728919, RBX1, SKP1, SKP2, SMURF1, SMURF2, TCEB1, TCEB2, UBA1, UBE2C, UBE2D1, UBE2D2, UBE2D3, UBE2D4, UBE2E1, UBE2E2, UBE2E3, VHL, WWP1, WWP2 37 ANAPC1(6), ANAPC4(3), ANAPC5(5), BTRC(1), CDC16(1), CDC20(1), CDC23(1), CDC27(3), CUL1(4), FBXW11(1), FBXW7(11), ITCH(2), RBX1(1), SKP1(1), SKP2(2), SMURF1(2), UBA1(3), UBE2C(1), UBE2D1(1), UBE2D2(2), UBE2E3(2), VHL(1), WWP1(3), WWP2(2) 10287866 60 47 58 20 15 18 8 9 10 0 0.84 1.00 1.00 442 EDG1PATHWAY The lipid S1P is an EDG1 ligand promoting chemotaxis via Rac1 and cell survival and proliferation via ERK activation. ADCY1, AKT1, ARHA, ASAH1, EDG1, GNAI1, GNB1, GNGT1, ITGAV, ITGB3, MAPK1, MAPK3, PDGFA, PDGFRA, PIK3CA, PIK3R1, PLCB1, PRKCA, PRKCB1, PTK2, RAC1, SKIP, SMPD1, SMPD2, SPHK1, SRC 21 ADCY1(10), AKT1(1), GNAI1(3), GNB1(1), ITGAV(4), ITGB3(4), MAPK1(1), MAPK3(1), PDGFRA(10), PIK3R1(2), PLCB1(8), PRKCA(5), PTK2(6), RAC1(1), SMPD1(4), SMPD2(1) 6741394 62 46 62 19 21 20 5 15 1 0 0.52 1.00 1.00 443 IL7PATHWAY IL-7 is required for B and T cell development and proliferation and may contribute to activation of VDJ recombination. BCL2, CREBBP, EP300, FYN, IL2RG, IL7, IL7R, JAK1, JAK3, LCK, NMI, PIK3CA, PIK3R1, PTK2B, STAT5A, STAT5B 15 CREBBP(17), EP300(9), FYN(5), IL2RG(1), IL7(1), IL7R(8), JAK1(2), JAK3(7), LCK(3), NMI(2), PIK3R1(2), STAT5A(2) 6927760 59 46 57 14 11 18 4 18 8 0 0.23 1.00 1.00 444 ST_P38_MAPK_PATHWAY p38 is a MAP kinase regulated by cytokines and cellular stress. AKT1, ATF1, CDC42, CREB1, CREB3, CREB5, DUSP1, DUSP10, EEF2K, EIF4E, ELK1, GADD45A, HSPB1, IL1R1, MAP2K3, MAP2K4, MAP2K6, MAP3K10, MAP3K4, MAP3K5, MAP3K7, MAP3K7IP1, MAP3K7IP2, MAPK1, MAPK11, MAPK12, MAPK13, MAPK14, MAPKAPK2, MAPKAPK5, MKNK1, MKNK2, MYEF2, NFKB1, NR2C2, SRF, TRAF6 35 AKT1(1), CDC42(1), CREB1(1), CREB3(2), CREB5(3), DUSP10(4), EEF2K(5), GADD45A(1), IL1R1(1), MAP2K3(3), MAP2K4(1), MAP2K6(2), MAP3K4(4), MAP3K5(4), MAP3K7(2), MAPK1(1), MAPK11(2), MAPK13(2), MAPK14(1), MAPKAPK2(2), MAPKAPK5(3), MKNK2(1), MYEF2(4), NFKB1(2), NR2C2(3), SRF(2), TRAF6(5) 8899644 63 46 63 23 23 21 4 6 9 0 0.80 1.00 1.00 445 ST_WNT_CA2_CYCLIC_GMP_PATHWAY Some Wnt glycoprotein/Frizzled receptor interactions increase intracellular calcium and decrease cGMP. BF, CAMK2A, CAMK2B, CAMK2D, CAMK2G, DAG1, ITPKA, ITPKB, ITPR1, ITPR2, ITPR3, NFAT5, PDE6A, PDE6B, PDE6C, PDE6D, PDE6G, PDE6H, SLC6A13, TF 19 CAMK2A(1), CAMK2B(2), CAMK2D(1), DAG1(2), ITPKA(1), ITPKB(6), ITPR1(6), ITPR2(13), ITPR3(4), NFAT5(3), PDE6A(3), PDE6B(3), PDE6C(1), PDE6H(2), SLC6A13(5), TF(6) 9665934 59 46 58 21 16 22 3 8 10 0 0.64 1.00 1.00 446 CXCR4PATHWAY CXCR4 is a G-protein coupled receptor that responds to the ligand SDF-1 by activating Ras and PI3 kinase to promote lymphocyte chemotaxis. BCAR1, CRK, CXCL12, CXCR4, GNAI1, GNAQ, GNB1, GNGT1, HRAS, MAP2K1, MAPK1, MAPK3, NFKB1, PIK3C2G, PIK3CA, PIK3R1, PLCG1, PRKCA, PRKCB1, PTK2, PTK2B, PXN, RAF1, RELA 22 BCAR1(6), CXCR4(5), GNAI1(3), GNB1(1), HRAS(4), MAP2K1(2), MAPK1(1), MAPK3(1), NFKB1(2), PIK3C2G(8), PIK3R1(2), PLCG1(3), PRKCA(5), PTK2(6), PXN(3), RAF1(1), RELA(3) 6853534 56 45 56 20 17 19 5 12 3 0 0.72 1.00 1.00 447 PORPHYRIN_AND_CHLOROPHYLL_METABOLISM ALAD, BLVRA, BLVRB, CP, CPOX, EPRS, FECH, GUSB, HCCS, HMBS, HMOX1, HMOX2, PPOX, UGT1A10, UGT1A10, UGT1A8, UGT1A7, UGT1A6, UGT1A5, UGT1A9, UGT1A4, UGT1A1, UGT1A3, UGT1A6, UGT1A8, UGT1A9, UGT2B15, UGT2B4, UROD, UROS 26 BLVRA(2), CP(2), CPOX(2), EPRS(12), FECH(2), GUSB(2), HCCS(1), PPOX(1), UGT1A1(1), UGT1A10(2), UGT1A3(1), UGT1A4(1), UGT1A5(3), UGT1A6(1), UGT1A7(2), UGT1A8(4), UGT1A9(3), UGT2B15(3), UGT2B4(8), UROD(1), UROS(1) 7334134 55 45 55 16 12 23 5 12 3 0 0.48 1.00 1.00 448 CARDIACEGFPATHWAY Cardiac hypertrophy, a response to high blood pressure, is stimulated by GPCR ligands such as angiotensin II that activate the EGF pathway. ADAM12, AGT, AGTR2, ARHA, EDN1, EDNRA, EDNRB, EGF, EGFR, FOS, HRAS, JUN, MYC, NFKB1, PLCG1, PRKCA, PRKCB1, RELA 16 ADAM12(5), AGT(1), AGTR2(3), EDNRA(1), EDNRB(5), EGF(6), EGFR(7), FOS(2), HRAS(4), JUN(3), MYC(1), NFKB1(2), PLCG1(3), PRKCA(5), RELA(3) 5460684 51 44 49 16 13 18 3 8 9 0 0.51 1.00 1.00 449 HSA00410_BETA_ALANINE_METABOLISM Genes involved in beta-alanine metabolism ABAT, ABP1, ACADM, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, AOC2, AOC3, CNDP1, DPYD, DPYS, ECHS1, EHHADH, GAD1, GAD2, HADHA, HIBCH, MLYCD, SMS, SRM, UPB1 25 ABAT(3), ABP1(5), ACADM(1), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH7A1(1), ALDH9A1(2), AOC2(2), AOC3(3), CNDP1(3), DPYD(8), DPYS(6), ECHS1(1), EHHADH(1), GAD1(5), GAD2(6), HADHA(2), HIBCH(1), MLYCD(1), SMS(2) 7226978 59 44 59 24 13 23 3 12 8 0 0.83 1.00 1.00 450 HSA00531_GLYCOSAMINOGLYCAN_DEGRADATION Genes involved in glycosaminoglycan degradation ARSB, GALNS, GLB1, GNS, GUSB, HEXA, HEXB, HGSNAT, HPSE, HPSE2, HYAL1, HYAL2, IDS, IDUA, LCT, NAGLU, SPAM1 17 ARSB(1), GALNS(3), GNS(1), GUSB(2), HEXA(5), HGSNAT(1), HPSE(3), HPSE2(2), HYAL1(3), IDS(1), IDUA(2), LCT(18), SPAM1(6) 5481154 48 44 48 17 12 15 2 12 7 0 0.66 1.00 1.00 451 IL2RBPATHWAY The beta subunit of the IL-2 receptor is required for IL-2 and IL-15 signal recognition and activates JAK kinase on ligand binding. AKT1, BAD, BCL2, BCL2L1, CBL, CFLAR, CRKL, E2F1, FOS, GRB2, HRAS, IL2RA, IL2RB, IL2RG, IRS1, JAK1, JAK3, MAPK1, MAPK3, MYC, NMI, PIK3CA, PIK3R1, PPIA, PTPN6, RAF1, RPS6KB1, SHC1, SOCS1, SOCS3, SOS1, STAT5A, STAT5B, SYK, TNFRSF6, TNFSF6, ZNFN1A3 33 AKT1(1), BCL2L1(1), CBL(3), CFLAR(1), CRKL(1), E2F1(2), FOS(2), HRAS(4), IL2RB(2), IL2RG(1), IRS1(6), JAK1(2), JAK3(7), MAPK1(1), MAPK3(1), MYC(1), NMI(2), PIK3R1(2), RAF1(1), RPS6KB1(1), SHC1(2), SOCS3(1), SOS1(11), STAT5A(2), SYK(1) 9076576 59 44 59 20 17 22 2 10 8 0 0.64 1.00 1.00 452 NTHIPATHWAY Hemophilus influenzae infections activate NF-kB via several pathways, inducing the inflammatory response. CHUK, CREBBP, DUSP1, EP300, IKBKB, IL1B, IL8, MADH3, MADH4, MAP2K3, MAP2K6, MAP3K14, MAP3K7, MAPK11, MAPK14, MYD88, NFKB1, NFKBIA, NR3C1, RELA, TGFBR1, TGFBR2, TLR2, TNF 22 CHUK(2), CREBBP(17), EP300(9), IKBKB(2), IL1B(1), MAP2K3(3), MAP2K6(2), MAP3K14(1), MAP3K7(2), MAPK11(2), MAPK14(1), NFKB1(2), NR3C1(1), RELA(3), TGFBR2(3), TLR2(3), TNF(1) 7910142 55 44 54 17 11 18 3 12 11 0 0.60 1.00 1.00 453 SIG_CD40PATHWAYMAP Genes related to CD40 signaling DUSP1, GORASP1, IKBKG, MAP2K4, MAP2K7, MAPK1, MAPK10, MAPK11, MAPK12, MAPK13, MAPK14, MAPK3, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, MAPKAPK5, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, PIK3CA, PIK3CD, PIK3R1, SYT1, TNFRSF5, TRAF2, TRAF3, TRAF5, TRAF6 31 GORASP1(1), MAP2K4(1), MAP2K7(1), MAPK1(1), MAPK10(1), MAPK11(2), MAPK13(2), MAPK14(1), MAPK3(1), MAPK8(2), MAPK8IP1(2), MAPK8IP3(3), MAPK9(1), MAPKAPK5(3), NFKB1(2), NFKB2(2), NFKBIB(1), NFKBIE(1), NFKBIL1(2), NFKBIL2(4), PIK3CD(4), PIK3R1(2), SYT1(4), TRAF3(3), TRAF5(2), TRAF6(5) 8440048 54 44 54 15 18 21 2 7 6 0 0.29 1.00 1.00 454 BIOGENIC_AMINE_SYNTHESIS AANAT, ACHE, CHAT, COMT, DBH, DDC, DXYS155E, GAD1, GAD2, HDC, MAOA, PAH, PNMT, SLC18A3, TH, TPH1 15 ACHE(3), CHAT(9), DBH(1), DDC(4), GAD1(5), GAD2(6), HDC(6), PAH(3), PNMT(2), SLC18A3(8), TH(1), TPH1(2) 3884494 50 43 50 18 13 22 4 9 2 0 0.54 1.00 1.00 455 CLASSICPATHWAY The classic complement pathway is initiated by antibodies and promotes phagocytosis and lysis of foreign cells as well as activating the inflammatory response. C1QA, C1QB, C1QG, C1R, C1S, C2, C3, C4A, C4B, C5, C6, C7, C8A, C9 11 C1QA(2), C1QB(2), C1R(3), C1S(3), C2(2), C3(5), C5(1), C6(18), C7(12), C8A(6), C9(3) 4733020 57 43 57 18 13 20 7 9 8 0 0.61 1.00 1.00 456 EPHA4PATHWAY Eph Kinases and ephrins support platelet aggregation ACTA1, EPHA4, EPHB1, FYN, ITGA1, ITGB1, L1CAM, LYN, RAP1B, SELP 10 ACTA1(3), EPHA4(1), EPHB1(13), FYN(5), ITGA1(4), ITGB1(5), L1CAM(2), LYN(2), RAP1B(1), SELP(11) 4202046 47 43 47 24 6 19 3 10 9 0 0.99 1.00 1.00 457 HSA03030_DNA_POLYMERASE Genes involved in DNA polymerase POLA1, POLA2, POLB, POLD1, POLD2, POLD3, POLD4, POLE, POLE2, POLE3, POLE4, POLG, POLG2, POLH, POLI, POLK, POLL, POLM, POLQ, POLS, PRIM1, PRIM2, REV1, REV3L, RFC5 23 POLA1(6), POLB(1), POLD1(2), POLD2(1), POLD3(1), POLE(7), POLE2(2), POLE4(1), POLG(2), POLG2(2), POLI(3), POLK(3), POLL(2), POLQ(18), PRIM1(3), REV1(5), REV3L(4), RFC5(1) 10723788 64 43 64 20 21 20 1 16 6 0 0.70 1.00 1.00 458 P38MAPKPATHWAY The Rho family GTPases activate the p38 MAPKs under environmental stress or in the presence of pro-inflammatory cytokines. ATF2, CDC42, CREB1, DAXX, DDIT3, ELK1, GRB2, HMGN1, HRAS, HSPB1, HSPB2, MAP2K4, MAP2K6, MAP3K1, MAP3K5, MAP3K7, MAP3K9, MAPK14, MAPKAPK2, MAPKAPK5, MAX, MEF2A, MEF2B, MEF2C, MEF2D, MKNK1, MYC, PDZGEF1, PLA2G4A, RAC1, RIPK1, RPS6KA5, SHC1, STAT1, TGFB1, TGFB2, TGFB3, TGFBR1, TRADD, TRAF2 38 ATF2(3), CDC42(1), CREB1(1), DAXX(3), HRAS(4), HSPB2(1), MAP2K4(1), MAP2K6(2), MAP3K1(3), MAP3K5(4), MAP3K7(2), MAP3K9(4), MAPK14(1), MAPKAPK2(2), MAPKAPK5(3), MEF2A(3), MEF2C(4), MYC(1), PLA2G4A(7), RAC1(1), RPS6KA5(4), SHC1(2), STAT1(2), TGFB1(1), TGFB2(3), TRADD(1) 9603456 64 43 64 25 20 24 4 11 5 0 0.91 1.00 1.00 459 PROPANOATE_METABOLISM ABAT, ACACA, ACADL, ACADM, ACADSB, ACAS2, ACAS2L, ACAT1, ACAT2, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH6A1, ALDH9A1, ECHS1, EHHADH, HADHA, LDHA, LDHB, LDHC, MCEE, MLYCD, MUT, PCCA, PCCB, SDS, SUCLA2, SUCLG1, SUCLG2 31 ABAT(3), ACACA(2), ACADL(2), ACADM(1), ACAT1(2), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH6A1(1), ALDH9A1(2), ECHS1(1), EHHADH(1), HADHA(2), LDHB(3), LDHC(3), MCEE(1), MLYCD(1), MUT(4), PCCA(3), PCCB(6), SDS(2), SUCLA2(2), SUCLG2(1) 8818654 53 43 53 15 15 18 4 9 7 0 0.52 1.00 1.00 460 ST_GA12_PATHWAY G-alpha-12 promotes cell survival and proliferation, is involved in the stress response, and activates JNK. BF, BTK, DLG4, EPHB2, F2, F2RL1, F2RL2, F2RL3, JUN, MAP2K5, MAPK1, MAPK7, MAPK8, MYEF2, PLD1, PLD2, PLD3, PTK2, RAF1, RASAL1, SRC, TEC, VAV1 22 BTK(7), DLG4(1), EPHB2(5), F2RL1(3), F2RL2(1), F2RL3(1), JUN(3), MAP2K5(1), MAPK1(1), MAPK7(1), MAPK8(2), MYEF2(4), PLD1(7), PLD2(2), PLD3(1), PTK2(6), RAF1(1), RASAL1(7), TEC(4), VAV1(7) 7362258 65 43 64 23 21 24 4 10 6 0 0.67 1.00 1.00 461 VIPPATHWAY Apoptosis of activated T cells is inhibited by vasoactive intestinal peptide (VIP) and its relative PACAP. CALM1, CALM2, CALM3, CHUK, EGR2, EGR3, GNAQ, MAP3K1, MYC, NFATC1, NFATC2, NFKB1, NFKBIA, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, RELA, SYT1, VIP, VIPR2 27 CALM2(1), CHUK(2), EGR2(6), EGR3(2), MAP3K1(3), MYC(1), NFATC1(3), NFATC2(4), NFKB1(2), PLCG1(3), PPP3CA(4), PPP3CB(4), PPP3CC(2), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), RELA(3), SYT1(4), VIP(1), VIPR2(3) 7456242 58 43 58 18 15 22 5 9 7 0 0.52 1.00 1.00 462 BUTANOATE_METABOLISM AACS, ABAT, ACADS, ACAT1, ACAT2, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH5A1, ALDH9A1, BDH, BUCS1, ECHS1, EHHADH, GAD1, GAD2, HADHA, HMGCL, L2HGDH, OXCT1, PDHA1, PDHA2, PDHB, SDHB, SDS 27 AACS(1), ABAT(3), ACADS(2), ACAT1(2), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH5A1(1), ALDH9A1(2), ECHS1(1), EHHADH(1), GAD1(5), GAD2(6), HADHA(2), HMGCL(1), OXCT1(3), PDHA1(3), PDHA2(8), SDHB(2), SDS(2) 6870978 55 42 55 25 13 24 3 8 7 0 0.93 1.00 1.00 463 ETSPATHWAY The Ets transcription factors are activated by Ras and promote macrophage differentiation. CSF1, CSF1R, DDX20, E2F1, E2F4, ETS1, ETS2, ETV3, FOS, HDAC2, HDAC5, HRAS, JUN, NCOR2, RBL1, RBL2, SIN3A, SIN3B 18 CSF1(2), CSF1R(3), E2F1(2), ETS1(2), ETV3(2), FOS(2), HDAC5(1), HRAS(4), JUN(3), NCOR2(6), RBL1(5), RBL2(7), SIN3A(5), SIN3B(3) 6956596 47 42 46 12 17 16 3 7 4 0 0.31 1.00 1.00 464 HSA00591_LINOLEIC_ACID_METABOLISM Genes involved in linoleic acid metabolism AKR1B10, ALOX15, ALOX5, CYP1A2, CYP2C18, CYP2C19, CYP2C8, CYP2C9, CYP2E1, CYP2J2, CYP3A4, CYP3A43, CYP3A5, CYP3A7, HSD3B7, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, RDH11, RDH12, RDH13, RDH14 31 AKR1B10(2), ALOX15(3), CYP1A2(1), CYP2C18(2), CYP2C19(8), CYP2C8(2), CYP2C9(3), CYP2J2(1), CYP3A4(1), CYP3A43(4), CYP3A7(1), PLA2G2A(1), PLA2G2E(2), PLA2G2F(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5), RDH11(1), RDH12(2), RDH13(1) 6391802 54 42 54 15 20 16 6 5 7 0 0.28 1.00 1.00 465 HSA00903_LIMONENE_AND_PINENE_DEGRADATION Genes involved in limonene and pinene degradation ACOT11, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, ARD1A, CYP2C19, CYP2C9, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, ECHS1, EHHADH, ESCO1, ESCO2, HADHA, LYCAT, MYST3, MYST4, NAT5, NAT6, PNPLA3, SH3GLB1, YOD1 26 ACOT11(1), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH7A1(1), ALDH9A1(2), CYP2C19(8), CYP2C9(3), DHRS2(2), DHRSX(4), ECHS1(1), EHHADH(1), ESCO1(2), ESCO2(1), HADHA(2), MYST3(11), MYST4(4), PNPLA3(1), SH3GLB1(1) 8260980 51 42 51 23 15 17 0 10 9 0 0.94 1.00 1.00 466 IRINOTECAN_PATHWAY_PHARMGKB ABCC1, ABCC2, ABCG2, BCHE, CES1, CES2, CES4, CYP3A4, CYP3A5, UGT1A10, UGT1A8, UGT1A7, UGT1A6, UGT1A5, UGT1A9, UGT1A4, UGT1A1, UGT1A3, UGT1A6 17 ABCC1(5), ABCC2(6), ABCG2(2), BCHE(13), CES1(2), CES2(1), CYP3A4(1), UGT1A1(1), UGT1A10(2), UGT1A3(1), UGT1A4(1), UGT1A5(3), UGT1A6(1), UGT1A7(2), UGT1A8(4), UGT1A9(3) 6078700 48 42 48 13 9 21 3 13 2 0 0.29 1.00 1.00 467 MPRPATHWAY Progesterone binding to its intracellular receptor activates the MAPK pathway and induces oocyte maturation; binding to membrane receptor inhibits adenylyl cyclase. ACTA1, ADCY1, CAP1, CCNB1, CDC2, CDC25C, GNAI1, GNAS, GNB1, GNGT1, HRAS, MAPK1, MAPK3, MYT1, PIN1, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, RPS6KA1, SRC 22 ACTA1(3), ADCY1(10), CAP1(2), CCNB1(2), CDC25C(1), GNAI1(3), GNAS(6), GNB1(1), HRAS(4), MAPK1(1), MAPK3(1), MYT1(4), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), RPS6KA1(2) 5464956 50 42 50 19 12 15 6 13 4 0 0.84 1.00 1.00 468 PPARGPATHWAY PPAR-gamma is a nuclear hormone receptor that is activated by fatty acids and regulates transcription through co-activations like Src-1 and Tif2. CREBBP, EP300, LPL, NCOA1, NCOA2, PPARBP, PPARG, PPARGC1, RXRA 7 CREBBP(17), EP300(9), LPL(3), NCOA1(6), NCOA2(12), RXRA(2) 4945908 49 42 48 16 10 18 3 11 7 0 0.73 1.00 1.00 469 TGFBPATHWAY The TGF-beta receptor responds to ligand binding by activating the SMAD family of transcriptional regulations, commonly blocking cell growth. APC, CDH1, CREBBP, EP300, MADH2, MADH3, MADH4, MADH7, MADHIP, MAP2K1, MAP3K7, MAP3K7IP1, MAPK3, SKIL, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2 13 APC(9), CDH1(3), CREBBP(17), EP300(9), MAP2K1(2), MAP3K7(2), MAPK3(1), SKIL(1), TGFB1(1), TGFB2(3), TGFBR2(3) 6832352 51 42 50 14 13 16 2 13 7 0 0.55 1.00 1.00 470 UCALPAINPATHWAY Calpains promote formation of integrin adhesion clusters which recruit Rac to enable the formation of mature focal adhesions that do not contain calpain. ACTA1, ACTN1, ACTN2, ACTN3, ARHA, CAPN1, CAPNS1, CAPNS2, ITGA1, ITGB1, ITGB3, PTK2, PXN, RAC1, SPTAN1, SRC, TLN1, VIL2 16 ACTA1(3), ACTN1(2), ACTN2(9), ACTN3(2), CAPN1(2), CAPNS2(1), ITGA1(4), ITGB1(5), ITGB3(4), PTK2(6), PXN(3), RAC1(1), SPTAN1(4), TLN1(6) 7632284 52 42 52 21 13 17 2 14 6 0 0.87 1.00 1.00 471 APOPTOSIS_GENMAPP APAF1, BAK1, BCL2L7P1, BAX, BCL2, BCL2L1, BID, BIRC2, BIRC3, BIRC4, CASP2, CASP3, CASP6, CASP7, CASP8, CASP9, CYCS, FADD, FAS, FASLG, GZMB, IKBKG, JUN, MAP2K4, MAP3K1, MAP3K14, MAPK10, MCL1, MDM2, MYC, NFKB1, NFKBIA, PARP1, PRF1, RELA, RIPK1, TNF, TNFRSF1A, TNFRSF1B, TNFSF10, TP53, TRADD, TRAF1, TRAF2 40 APAF1(4), BAK1(1), BAX(1), BCL2L1(1), BIRC2(1), BIRC3(3), CASP2(1), CASP7(2), CASP8(2), CASP9(3), FADD(1), FAS(1), FASLG(1), GZMB(1), JUN(3), MAP2K4(1), MAP3K1(3), MAP3K14(1), MAPK10(1), MCL1(2), MDM2(2), MYC(1), NFKB1(2), PARP1(3), PRF1(2), RELA(3), TNF(1), TNFRSF1A(2), TNFRSF1B(1), TRADD(1), TRAF1(4) 9803884 56 41 54 28 20 14 3 10 9 0 0.98 1.00 1.00 472 HDACPATHWAY Myocyte enhancer factor MEF2 activates transcription of genes required for muscle cell differentiation and is inhibited by histone deacetylases. AKT1, AVP, CABIN1, CALM1, CALM2, CALM3, CAMK1, CAMK1G, HDAC5, IGF1, IGF1R, INS, INSR, MAP2K6, MAPK14, MAPK7, MEF2A, MEF2B, MEF2C, MEF2D, MYOD1, NFATC1, NFATC2, PIK3CA, PIK3R1, PPP3CA, PPP3CB, PPP3CC, SYT1, YWHAH 28 AKT1(1), CABIN1(5), CALM2(1), CAMK1G(3), HDAC5(1), IGF1(3), IGF1R(1), INSR(9), MAP2K6(2), MAPK14(1), MAPK7(1), MEF2A(3), MEF2C(4), MYOD1(1), NFATC1(3), NFATC2(4), PIK3R1(2), PPP3CA(4), PPP3CB(4), PPP3CC(2), SYT1(4) 8478496 59 41 59 24 21 21 3 8 6 0 0.79 1.00 1.00 473 HSA00710_CARBON_FIXATION Genes involved in carbon fixation ALDOA, ALDOB, ALDOC, FBP1, FBP2, GOT1, GOT2, GPT, GPT2, MDH1, MDH2, ME1, ME3, PGK1, PGK2, PKLR, PKM2, RPE, RPIA, TKT, TKTL1, TKTL2, TPI1 23 ALDOA(1), ALDOB(2), FBP2(1), GOT2(3), GPT(1), GPT2(4), MDH1(1), MDH2(1), ME1(2), ME3(2), PGK1(2), PGK2(4), PKLR(4), PKM2(3), RPIA(2), TKT(1), TKTL2(11), TPI1(3) 5357444 48 41 48 20 8 18 6 9 7 0 0.81 1.00 1.00 474 IL12PATHWAY IL12 and Stat4 Dependent Signaling Pathway in Th1 Development CCR5, CD3D, CD3E, CD3G, CD3Z, CXCR3, ETV5, IFNG, IL12A, IL12B, IL12RB1, IL12RB2, IL18, IL18R1, JAK2, JUN, MAP2K6, MAPK14, MAPK8, STAT4, TRA@, TRB@, TYK2 20 CCR5(2), CD3D(1), CXCR3(1), ETV5(1), IFNG(1), IL12A(1), IL12B(3), IL12RB1(3), IL12RB2(4), IL18R1(2), JAK2(4), JUN(3), MAP2K6(2), MAPK14(1), MAPK8(2), STAT4(5), TYK2(8) 4982220 44 41 43 12 14 17 2 4 7 0 0.47 1.00 1.00 475 IL1RPATHWAY The cytokine IL-1 stimulates its primary receptor, IL-1R1, which induces transcription of inflammation-related genes such as interferons. CHUK, IFNA1, IFNB1, IKBKB, IL1A, IL1B, IL1R1, IL1RAP, IL1RN, IL6, IRAK1, IRAK2, IRAK3, JUN, MAP2K3, MAP2K6, MAP3K1, MAP3K14, MAP3K7, MAP3K7IP1, MAPK14, MAPK8, MYD88, NFKB1, NFKBIA, RELA, SITPEC, TGFB1, TGFB2, TGFB3, TNF, TOLLIP, TRAF6 31 CHUK(2), IFNA1(1), IFNB1(2), IKBKB(2), IL1A(1), IL1B(1), IL1R1(1), IL1RAP(2), IL6(1), IRAK1(3), IRAK2(1), IRAK3(4), JUN(3), MAP2K3(3), MAP2K6(2), MAP3K1(3), MAP3K14(1), MAP3K7(2), MAPK14(1), MAPK8(2), NFKB1(2), RELA(3), TGFB1(1), TGFB2(3), TNF(1), TOLLIP(1), TRAF6(5) 7908896 54 41 53 18 17 19 3 9 6 0 0.66 1.00 1.00 476 SPPAPATHWAY Thrombin cleaves protease-activated receptors PAR1 and PAR4 to induce calcium influx and activate platelet aggregation, a process inhibited by aspirin. F2, F2R, F2RL3, GNAI1, GNB1, GNGT1, HRAS, ITGA1, ITGB1, MAP2K1, MAPK1, MAPK3, PLA2G4A, PLCB1, PRKCA, PRKCB1, PTGS1, PTK2, RAF1, SRC, SYK, TBXAS1 21 F2R(2), F2RL3(1), GNAI1(3), GNB1(1), HRAS(4), ITGA1(4), ITGB1(5), MAP2K1(2), MAPK1(1), MAPK3(1), PLA2G4A(7), PLCB1(8), PRKCA(5), PTGS1(2), PTK2(6), RAF1(1), SYK(1), TBXAS1(2) 6511952 56 41 56 20 14 19 5 13 5 0 0.81 1.00 1.00 477 TNFR1PATHWAY Tumor necrosis factor alpha binds to its receptor TNFR1 and induces caspase-dependent apoptosis. ADPRT, ARHGDIB, BAG4, CASP2, CASP3, CASP8, CRADD, DFFA, DFFB, FADD, JUN, LMNA, LMNB1, LMNB2, MADD, MAP2K4, MAP3K1, MAP3K7, MAPK8, PAK1, PAK2, PRKDC, RB1, RIPK1, SPTAN1, TNF, TNFRSF1A, TRADD, TRAF2 27 ARHGDIB(2), BAG4(1), CASP2(1), CASP8(2), CRADD(1), DFFB(2), FADD(1), JUN(3), LMNA(1), MADD(5), MAP2K4(1), MAP3K1(3), MAP3K7(2), MAPK8(2), PAK1(2), PAK2(1), PRKDC(12), SPTAN1(4), TNF(1), TNFRSF1A(2), TRADD(1) 10086548 50 41 49 23 14 16 0 10 10 0 0.95 1.00 1.00 478 EIF4PATHWAY The eIF-4F complex recognizes 5' mRNA caps, recruits RNA helicases, and maintains mRNA-ribosome bridging. AKT1, EIF4A1, EIF4A2, EIF4E, EIF4EBP1, EIF4G1, EIF4G2, EIF4G3, FRAP1, GHR, IRS1, MAPK1, MAPK14, MAPK3, MKNK1, PABPC1, PDK2, PDPK1, PIK3CA, PIK3R1, PRKCA, PRKCB1, PTEN, RPS6KB1 20 AKT1(1), EIF4A1(5), EIF4A2(2), EIF4G1(10), EIF4G2(3), EIF4G3(4), GHR(3), IRS1(6), MAPK1(1), MAPK14(1), MAPK3(1), PABPC1(4), PDK2(2), PDPK1(1), PIK3R1(2), PRKCA(5), RPS6KB1(1) 6693156 52 40 52 16 19 16 6 7 4 0 0.69 1.00 1.00 479 GLYCOSPHINGOLIPID_METABOLISM ARSA, ARSB, ARSD, ARSE, ASAH1, GAL3ST1, GALC, GBA, GBAP, GLA, GLB1, LCT, NEU1, NEU2, NEU3, NEU4, PPAP2A, PPAP2B, PPAP2C, SMPD1, SMPD2, SPTLC1, SPTLC2, UGCG 23 ARSA(2), ARSB(1), ARSD(1), ARSE(2), GAL3ST1(1), GALC(2), GBA(4), GLA(2), LCT(18), NEU1(2), NEU2(2), NEU4(2), PPAP2B(2), SMPD1(4), SMPD2(1), SPTLC1(1), SPTLC2(3), UGCG(1) 6530820 51 40 51 19 14 18 3 12 4 0 0.69 1.00 1.00 480 HISTIDINE_METABOLISM ABP1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH3B1, ALDH3B2, ALDH9A1, AOC2, AOC3, ASPA, CNDP1, DDC, HAL, HARS, HARSL, HDC, HNMT, MAOA, MAOB, PRPS1, PRPS2 24 ABP1(5), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH3B2(1), ALDH9A1(2), AOC2(2), AOC3(3), CNDP1(3), DDC(4), HAL(2), HARS(2), HDC(6), HNMT(3), PRPS1(2), PRPS2(1) 6561080 46 40 46 23 6 24 3 11 2 0 0.92 1.00 1.00 481 HSA00030_PENTOSE_PHOSPHATE_PATHWAY Genes involved in pentose phosphate pathway ALDOA, ALDOB, ALDOC, DERA, FBP1, FBP2, G6PD, GPI, H6PD, PFKL, PFKM, PFKP, PGD, PGLS, PGM1, PGM3, PRPS1, PRPS1L1, PRPS2, RBKS, RPE, RPIA, TALDO1, TKT, TKTL1, TKTL2 26 ALDOA(1), ALDOB(2), DERA(1), FBP2(1), G6PD(1), GPI(5), H6PD(2), PFKL(2), PFKM(5), PFKP(2), PGD(1), PGM1(1), PRPS1(2), PRPS1L1(3), PRPS2(1), RBKS(1), RPIA(2), TALDO1(1), TKT(1), TKTL2(11) 6533490 46 40 46 17 4 18 6 9 9 0 0.67 1.00 1.00 482 HSA00960_ALKALOID_BIOSYNTHESIS_II Genes involved in alkaloid biosynthesis II AADAC, ABP1, AOC2, AOC3, ARD1A, CES1, CES7, DDHD1, ESCO1, ESCO2, LIPA, LYCAT, MYST3, MYST4, NAT5, NAT6, PLA1A, PNPLA3, PPME1, PRDX6, SH3GLB1 18 AADAC(3), ABP1(5), AOC2(2), AOC3(3), CES1(2), CES7(2), DDHD1(5), ESCO1(2), ESCO2(1), LIPA(2), MYST3(11), MYST4(4), PLA1A(5), PNPLA3(1), PRDX6(2), SH3GLB1(1) 6769874 51 40 51 22 12 16 1 17 5 0 0.93 1.00 1.00 483 NFKBPATHWAY Inactive nuclear factor kB (NF-kB) is inhibited by the IkB family in the cytoplasm; active NF-kB is localized in the nucleus and regulates transcription of a variety of genes. CHUK, FADD, IKBKB, IKBKG, IL1A, IL1R1, IRAK1, MAP3K1, MAP3K14, MAP3K7, MAP3K7IP1, MYD88, NFKB1, NFKBIA, RELA, RIPK1, TLR4, TNF, TNFAIP3, TNFRSF1A, TNFRSF1B, TRADD, TRAF6 21 CHUK(2), FADD(1), IKBKB(2), IL1A(1), IL1R1(1), IRAK1(3), MAP3K1(3), MAP3K14(1), MAP3K7(2), NFKB1(2), RELA(3), TLR4(10), TNF(1), TNFAIP3(5), TNFRSF1A(2), TNFRSF1B(1), TRADD(1), TRAF6(5) 6534736 46 40 46 19 10 17 6 6 7 0 0.90 1.00 1.00 484 PHENYLALANINE_METABOLISM ABP1, ALDH1A3, ALDH3A1, ALDH3B1, ALDH3B2, AOC2, AOC3, DDC, EPX, GOT1, GOT2, HPD, LPO, MAOA, MAOB, MPO, PRDX1, PRDX2, PRDX5, PRDX6, TAT, TPO 22 ABP1(5), ALDH3A1(2), ALDH3B2(1), AOC2(2), AOC3(3), DDC(4), EPX(4), GOT2(3), HPD(1), LPO(2), MPO(4), PRDX1(1), PRDX6(2), TAT(1), TPO(10) 5880764 45 40 45 25 7 17 6 14 1 0 0.98 1.00 1.00 485 STATIN_PATHWAY_PHARMGKB ABCA1, APOA1, APOA1, LOC440837, APOA4, APOC1, APOC2, APOC3, APOC3, LOC440838, APOE, CETP, CYP7A1, DGAT1, HMGCR, LCAT, LDLR, LIPC, LPL, LRP1, SCARB1, SOAT1 18 ABCA1(9), APOA4(3), APOC2(2), APOC3(2), CYP7A1(5), DGAT1(1), HMGCR(1), LDLR(4), LIPC(2), LPL(3), LRP1(15), SCARB1(3), SOAT1(1) 7302094 51 40 51 22 17 18 1 10 5 0 0.82 1.00 1.00 486 CK1PATHWAY Caseine kinase 1 (CK1) and cdk5 phosphorylate DARPP32 in the dopamine signaling pathway. CDK5, CDK5R1, CSNK1D, DRD1, DRD2, GRM1, PLCB1, PPP1CA, PPP1R1B, PPP2CA, PPP3CA, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B 17 CDK5(1), CDK5R1(1), CSNK1D(2), DRD1(1), DRD2(4), GRM1(12), PLCB1(8), PPP1R1B(1), PPP3CA(4), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2) 4313296 44 39 44 14 12 17 4 7 4 0 0.51 1.00 1.00 487 IL2PATHWAY IL-2 promotes proliferation via JAK and MAP kinase and has surface receptors on activated B cells, LPS-treated monocytes, and many T cells. CSNK2A1, ELK1, FOS, GRB2, HRAS, IL2, IL2RA, IL2RB, IL2RG, JAK1, JAK3, JUN, LCK, MAP2K1, MAPK3, MAPK8, RAF1, SHC1, SOS1, STAT5A, STAT5B, SYK 22 CSNK2A1(3), FOS(2), HRAS(4), IL2RB(2), IL2RG(1), JAK1(2), JAK3(7), JUN(3), LCK(3), MAP2K1(2), MAPK3(1), MAPK8(2), RAF1(1), SHC1(2), SOS1(11), STAT5A(2), SYK(1) 6284646 49 39 48 13 14 16 3 11 5 0 0.36 1.00 1.00 488 PAR1PATHWAY Activated extracellular thrombin cleaves and activates the G-protein coupled receptors PAR1 and PAR4, which activate platelets. ADCY1, ARHA, ARHGEF1, F2, F2R, F2RL3, GNA12, GNA13, GNAI1, GNAQ, GNB1, GNGT1, MAP3K7, PIK3CA, PIK3R1, PLCB1, PPP1R12B, PRKCA, PRKCB1, PTK2B, ROCK1 18 ADCY1(10), ARHGEF1(2), F2R(2), F2RL3(1), GNA12(2), GNA13(1), GNAI1(3), GNB1(1), MAP3K7(2), PIK3R1(2), PLCB1(8), PPP1R12B(5), PRKCA(5), ROCK1(5) 6373824 49 39 49 13 16 16 4 10 3 0 0.39 1.00 1.00 489 ST_GRANULE_CELL_SURVIVAL_PATHWAY The survival and differentiation of granule cells in the brain is controlled by pro-growth PACAP and pro-apoptotic ceramides. ADPRT, APC, ASAH1, CAMP, CASP3, CERK, CREB1, CREB3, CREB5, CXCL2, DAG1, EPHB2, FOS, GNAQ, IL8RB, ITPKA, ITPKB, JUN, MAP2K4, MAP2K7, MAPK1, MAPK10, MAPK8, MAPK8IP1, MAPK8IP2, MAPK8IP3, MAPK9, PACAP 25 APC(9), CERK(6), CREB1(1), CREB3(2), CREB5(3), DAG1(2), EPHB2(5), FOS(2), ITPKA(1), ITPKB(6), JUN(3), MAP2K4(1), MAP2K7(1), MAPK1(1), MAPK10(1), MAPK8(2), MAPK8IP1(2), MAPK8IP3(3), MAPK9(1) 7663434 52 39 51 18 20 17 4 4 7 0 0.70 1.00 1.00 490 BADPATHWAY When phosphorylated, BAD is inhibited by sequestration; when non-phosphorylated, it promotes apoptosis by inactivating pro-survival BCL-XL and BCL-2. ADCY1, AKT1, BAD, BAX, BCL2, BCL2L1, CSF2RB, IGF1, IGF1R, IL3, IL3RA, KIT, KITLG, PIK3CA, PIK3R1, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, YWHAH 21 ADCY1(10), AKT1(1), BAX(1), BCL2L1(1), CSF2RB(5), IGF1(3), IGF1R(1), IL3(1), KIT(7), PIK3R1(2), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2) 5252068 42 38 42 12 14 13 2 10 3 0 0.37 1.00 1.00 491 EXTRINSICPATHWAY The extrinsic prothrombin activation pathway requires the release of thromboplastin from damaged tissues to activate the blood clotting cascade. F10, F2, F2R, F3, F5, F7, FGA, FGB, FGG, PROC, PROS1, SERPINC1, TFPI 13 F10(3), F2R(2), F3(1), F5(19), F7(2), FGA(5), FGB(4), FGG(2), PROS1(5), SERPINC1(7) 4372214 50 38 50 12 18 14 6 9 3 0 0.36 1.00 1.00 492 FRUCTOSE_AND_MANNOSE_METABOLISM AKR1B1, ALDOA, ALDOB, ALDOC, FBP1, FBP2, FPGT, GCK, GMDS, GMPPA, GMPPB, HK1, HK2, HK3, KHK, MPI, PFKFB1, PFKFB3, PFKFB4, PFKM, PFKP, PMM1, PMM2, SORD, TPI1 25 AKR1B1(1), ALDOA(1), ALDOB(2), FBP2(1), FPGT(4), GCK(5), GMPPA(2), HK1(3), HK2(5), HK3(5), KHK(2), MPI(1), PFKFB1(4), PFKM(5), PFKP(2), PMM1(1), SORD(1), TPI1(3) 6462824 48 38 48 18 14 20 2 8 4 0 0.59 1.00 1.00 493 HSA00020_CITRATE_CYCLE Genes involved in citrate cycle (TCA cycle) ACLY, ACO1, ACO2, CLYBL, CS, DLD, DLST, FH, IDH1, IDH2, IDH3A, IDH3B, IDH3G, LOC283398, LOC441996, MDH1, MDH2, OGDH, OGDHL, PC, PCK1, PCK2, SDHA, SDHB, SDHC, SDHD, SUCLA2, SUCLG1, SUCLG2 27 ACO1(2), ACO2(3), CLYBL(1), DLD(2), DLST(1), FH(2), IDH1(2), IDH3A(1), IDH3B(4), IDH3G(2), MDH1(1), MDH2(1), OGDH(3), OGDHL(6), PC(2), PCK1(2), PCK2(1), SDHA(3), SDHB(2), SUCLA2(2), SUCLG2(1) 7932036 44 38 44 25 9 18 1 10 6 0 0.99 1.00 1.00 494 HSA00511_N_GLYCAN_DEGRADATION Genes involved in N-glycan degradation AGA, FLJ21865, FUCA1, FUCA2, GLB1, HEXA, HEXB, LCT, MAN2B1, MAN2B2, MAN2C1, MANBA, NEU1, NEU2, NEU3, NEU4 15 AGA(3), FUCA1(2), FUCA2(1), HEXA(5), LCT(18), MAN2B1(2), MAN2B2(3), MAN2C1(6), MANBA(2), NEU1(2), NEU2(2), NEU4(2) 5495928 48 38 48 15 12 14 4 14 4 0 0.47 1.00 1.00 495 PROSTAGLANDIN_SYNTHESIS_REGULATION ANXA1, ANXA2, ANXA3, ANXA4, ANXA5, ANXA6, ANXA8, CYP11A1, EDN1, EDNRA, EDNRB, HPGD, HSD11B1, HSD11B2, PLA2G4A, PRL, PTGDR, PTGDS, PTGER1, PTGER2, PTGER4, PTGFR, PTGIR, PTGIS, PTGS1, PTGS2, S100A6, SCGB1A1, TBXAS1 27 ANXA1(1), ANXA4(1), ANXA5(3), ANXA6(4), CYP11A1(2), EDNRA(1), EDNRB(5), HSD11B1(3), HSD11B2(1), PLA2G4A(7), PRL(1), PTGDR(5), PTGER2(2), PTGER4(2), PTGFR(5), PTGIR(1), PTGS1(2), TBXAS1(2) 5530816 48 38 48 18 8 18 4 9 9 0 0.74 1.00 1.00 496 RARRXRPATHWAY RXR and RAR suppress transcription in the absence of ligand and, on binding trans- or 9-cis-retinoic acid, are ubiquitinated to allow transcription to proceed. ERCC3, GTF2A1, GTF2B, GTF2E1, GTF2F1, HDAC3, NCOA1, NCOA2, NCOA3, NCOR2, PCAF, POLR2A, RARA, RXRA, TBP 14 ERCC3(1), GTF2A1(1), GTF2B(2), GTF2E1(2), GTF2F1(1), HDAC3(1), NCOA1(6), NCOA2(12), NCOA3(4), NCOR2(6), POLR2A(2), RARA(1), RXRA(2), TBP(1) 6661294 42 38 42 20 8 17 2 8 7 0 0.96 1.00 1.00 497 ALTERNATIVEPATHWAY The alternative complement pathway is an antibody-independent mechanism of immune activation that results in cell lysis via the membrane attack complex. BF, C3, C5, C6, C7, C8A, C9, DF, PFC 6 C3(5), C5(1), C6(18), C7(12), C8A(6), C9(3) 3391968 45 37 45 14 8 17 7 7 6 0 0.67 1.00 1.00 498 BILE_ACID_BIOSYNTHESIS ACAA1, ACAA2, ADH1A, ADH1A, ADH1B, ADH1C, ADH1B, ADH1C, ADH4, ADH6, ADH7, ADHFE1, AKR1C4, AKR1D1, ALDH1A1, ALDH1A2, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH9A1, BAAT, CEL, CYP27A1, CYP7A1, HADHB, SOAT2, SRD5A1, SRD5A2 27 ACAA1(1), ACAA2(1), ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH7(1), ADHFE1(2), AKR1C4(1), AKR1D1(4), ALDH1A2(4), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH9A1(2), BAAT(2), CEL(1), CYP27A1(1), CYP7A1(5), HADHB(3), SOAT2(2), SRD5A1(2), SRD5A2(2) 6210064 46 37 46 14 11 19 0 11 5 0 0.44 1.00 1.00 499 CREMPATHWAY The transcription factor CREM activates a post-meiotic transcriptional cascade culminating in spermatogenesis. ADCY1, CREM, FHL5, FSHB, FSHR, GNAS, XPO1 7 ADCY1(10), CREM(2), FHL5(3), FSHB(2), FSHR(15), GNAS(6), XPO1(2) 2536856 40 37 40 15 11 10 4 13 2 0 0.88 1.00 1.00 500 HSA00604_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GANGLIOSERIES Genes involved in glycosphingolipid biosynthesis - ganglioseries B3GALT4, B4GALNT1, GLB1, HEXA, HEXB, LCT, SLC33A1, ST3GAL1, ST3GAL2, ST3GAL5, ST6GALNAC3, ST6GALNAC4, ST6GALNAC5, ST6GALNAC6, ST8SIA1, ST8SIA5 16 B3GALT4(1), HEXA(5), LCT(18), SLC33A1(3), ST3GAL1(4), ST3GAL5(2), ST6GALNAC3(5), ST6GALNAC4(1), ST6GALNAC5(3), ST8SIA1(3) 4389658 45 37 45 15 13 19 2 6 5 0 0.42 1.00 1.00 501 PTDINSPATHWAY Phosphoinositide 3 kinase (PI3K) phosphorylate inositol rings of phosphoinositide lipids, influencing vesicle trafficking, cell proliferation, and migration. AKT1, AP2A1, AP2M1, ARF1, BAD, BTK, EEA1, GRASP, GSK3A, GSK3B, LYN, PDPK1, PFKL, PFKM, PFKP, PFKX, PLCG1, PRKCE, PRKCZ, RAB5A, RAC1, RPS6KB1, VAV2 22 AKT1(1), AP2A1(2), AP2M1(1), ARF1(1), BTK(7), EEA1(3), GRASP(1), GSK3A(3), LYN(2), PDPK1(1), PFKL(2), PFKM(5), PFKP(2), PLCG1(3), PRKCE(3), PRKCZ(1), RAC1(1), RPS6KB1(1), VAV2(4) 6673220 44 37 44 19 8 13 7 7 9 0 0.92 1.00 1.00 502 CARM1PATHWAY The methyltransferase CARM1 interacts with transcription factors such as CBP/p300 and methylates histones H3 and H4. CARM1, CREB1, CREBBP, EP300, NCOA3, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, RARA, RXRA 13 CARM1(1), CREB1(1), CREBBP(17), EP300(9), NCOA3(4), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), RARA(1), RXRA(2) 5543098 45 36 44 12 9 16 2 13 5 0 0.44 1.00 1.00 503 CBLPATHWAY Activated EGF receptors undergo endocytosis into clathrin-coated vesicles, where they are recycled to the membrane or ubiquitinated by Cbl. CBL, CSF1R, EGF, EGFR, GRB2, MET, PDGFRA, PRKCA, PRKCB1, SH3GLB1, SH3GLB2, SH3KBP1, SRC 12 CBL(3), CSF1R(3), EGF(6), EGFR(7), MET(4), PDGFRA(10), PRKCA(5), SH3GLB1(1), SH3KBP1(4) 5179266 43 36 42 14 13 15 4 5 6 0 0.65 1.00 1.00 504 GLEEVECPATHWAY The drug Gleevec specifically targets the abnormal bcr-abl protein, an apoptosis inhibitor present in chronic myeloid leukemia. AKT1, BCL2, BCR, CRKL, FOS, GRB2, HRAS, JAK2, JUN, MAP2K1, MAP2K4, MAP3K1, MAPK3, MAPK8, MYC, PIK3CA, PIK3R1, RAF1, SOS1, STAT1, STAT5A, STAT5B 21 AKT1(1), BCR(2), CRKL(1), FOS(2), HRAS(4), JAK2(4), JUN(3), MAP2K1(2), MAP2K4(1), MAP3K1(3), MAPK3(1), MAPK8(2), MYC(1), PIK3R1(2), RAF1(1), SOS1(11), STAT1(2), STAT5A(2) 6885752 45 36 44 14 18 12 4 8 3 0 0.63 1.00 1.00 505 HSA05050_DENTATORUBROPALLIDOLUYSIAN_ATROPHY Genes involved in dentatorubropallidoluysian atrophy (DRPLA) ATN1, BAIAP2, CASP1, CASP3, CASP7, CASP8, GAPDH, INS, INSR, ITCH, MAGI1, MAGI2, RERE, WWP1, WWP2 15 ATN1(2), BAIAP2(2), CASP1(1), CASP7(2), CASP8(2), GAPDH(2), INSR(9), ITCH(2), MAGI1(7), MAGI2(12), RERE(3), WWP1(3), WWP2(2) 6437904 49 36 49 18 10 16 2 12 9 0 0.82 1.00 1.00 506 MTORPATHWAY Mammalian target of rapamycin (mTOR) senses mitogenic factors and nutrients, including ATP, and induces cell proliferation. AKT1, EIF3S10, EIF4A1, EIF4A2, EIF4B, EIF4E, EIF4EBP1, EIF4G1, EIF4G2, EIF4G3, FKBP1A, FRAP1, MKNK1, PDK2, PDPK1, PIK3CA, PIK3R1, PPP2CA, PTEN, RPS6, RPS6KB1, TSC1, TSC2 19 AKT1(1), EIF4A1(5), EIF4A2(2), EIF4B(5), EIF4G1(10), EIF4G2(3), EIF4G3(4), PDK2(2), PDPK1(1), PIK3R1(2), RPS6(1), RPS6KB1(1), TSC1(5), TSC2(5) 6610564 47 36 47 15 19 13 4 4 7 0 0.68 1.00 1.00 507 NKTPATHWAY T cell differentiation into Th1 and Th2 cells occurs by differential chemokine receptor expression, which mediates tissue localization and immune response. CCL3, CCL4, CCR1, CCR2, CCR3, CCR4, CCR5, CCR7, CD28, CD4, CSF2, CXCR3, CXCR4, IFNG, IFNGR1, IFNGR2, IL12A, IL12B, IL12RB1, IL12RB2, IL18R1, IL2, IL4, IL4R, IL5, TGFB1, TGFB2, TGFB3, TNFSF5 28 CCL3(2), CCR1(3), CCR2(1), CCR3(1), CCR4(3), CCR5(2), CD4(1), CXCR3(1), CXCR4(5), IFNG(1), IFNGR1(4), IFNGR2(1), IL12A(1), IL12B(3), IL12RB1(3), IL12RB2(4), IL18R1(2), IL4(2), IL4R(2), TGFB1(1), TGFB2(3) 5338042 46 36 46 19 12 14 1 10 9 0 0.83 1.00 1.00 508 PLCEPATHWAY Gs-coupled receptors activate adenylyl cyclase, which activates Epac1, leading to the stimulation of PLC and subsequent DAG and IP3 production. ADCY1, ADRB2, GNAS, PLCE1, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PTGER1, RAP2B 11 ADCY1(10), ADRB2(4), GNAS(6), PLCE1(13), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2) 3927214 43 36 42 13 12 15 3 9 4 0 0.56 1.00 1.00 509 RNA_TRANSCRIPTION_REACTOME CCNH, CDK7, ERCC3, GTF2A2, GTF2B, GTF2E1, GTF2E2, GTF2F2, GTF2H1, GTF2H2, GTF2H4, ILK, MGC9850, MNAT1, POLR1A, POLR1B, POLR2A, POLR2B, POLR2C, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR3B, POLR3D, POLR3E, POLR3H, POLR3K, TAF12, TAF13, TAF5, TAF6, TAF7, TAF9, TBP, VARS2L 36 CDK7(1), ERCC3(1), GTF2B(2), GTF2E1(2), GTF2H1(2), GTF2H4(2), ILK(1), POLR1A(3), POLR1B(2), POLR2A(2), POLR2B(6), POLR2E(2), POLR3B(2), POLR3D(2), POLR3E(4), POLR3H(2), TAF5(1), TAF9(2), TBP(1) 9353188 40 36 40 19 12 13 2 5 8 0 0.95 1.00 1.00 510 BLYMPHOCYTEPATHWAY B cells express the major histocompatibility complex (class II MHC), immunoglobulins, adhesion proteins, and other factors on their cell surface. CD80, CR1, CR2, FCGR2B, HLA-DRA, HLA-DRB1, ICAM1, ITGAL, ITGB2, PTPRC, TNFRSF5 10 CD80(3), CR1(7), CR2(11), FCGR2B(3), HLA-DRA(1), HLA-DRB1(2), ICAM1(2), ITGAL(1), ITGB2(5), PTPRC(7) 4110198 42 35 42 14 15 12 2 10 3 0 0.67 1.00 1.00 511 CALCINEURINPATHWAY Increased intracellular calcium activates the phosphatase calcineurin in differentiating keratinocytes. CALM1, CALM2, CALM3, CDKN1A, GNAQ, MARCKS, NFATC1, NFATC2, NFATC3, NFATC4, PLCG1, PPP3CA, PPP3CB, PPP3CC, PRKCA, PRKCB1, SP1, SP3, SYT1 18 CALM2(1), CDKN1A(2), MARCKS(1), NFATC1(3), NFATC2(4), NFATC3(6), NFATC4(2), PLCG1(3), PPP3CA(4), PPP3CB(4), PPP3CC(2), PRKCA(5), SP1(2), SP3(1), SYT1(4) 5587776 44 35 44 12 14 19 3 4 4 0 0.43 1.00 1.00 512 HSA00220_UREA_CYCLE_AND_METABOLISM_OF_AMINO_GROUPS Genes involved in urea cycle and metabolism of amino groups ABP1, ACY1, ADC, AGMAT, ALDH18A1, ALDH1A3, ALDH1B1, ALDH2, ALDH3A1, ALDH3A2, ALDH7A1, ALDH9A1, AMD1, AOC2, AOC3, ARG1, ARG2, ASL, ASS1, CPS1, GATM, MAOA, MAOB, NAGS, ODC1, OTC, SAT1, SAT2, SMS, SRM 29 ABP1(5), ACY1(2), ADC(1), AGMAT(1), ALDH18A1(3), ALDH1B1(2), ALDH2(2), ALDH3A1(2), ALDH7A1(1), ALDH9A1(2), AMD1(1), AOC2(2), AOC3(3), ARG1(2), ASL(4), GATM(1), NAGS(1), ODC1(1), OTC(3), SMS(2) 7093300 41 35 41 15 9 14 4 10 4 0 0.66 1.00 1.00 513 HSA00450_SELENOAMINO_ACID_METABOLISM Genes involved in selenoamino acid metabolism AHCY, CARM1, CBS, CTH, GGT1, GGTL3, GGTL4, HEMK1, KIAA0828, LCMT1, LCMT2, MARS, MARS2, MAT1A, MAT2B, METTL2B, METTL6, PAPSS1, PAPSS2, PRMT2, PRMT3, PRMT5, PRMT6, PRMT7, PRMT8, SCLY, SEPHS1, SEPHS2, WBSCR22 26 AHCY(1), CARM1(1), CBS(4), GGT1(1), LCMT1(2), LCMT2(2), MARS(1), MAT1A(1), METTL2B(1), METTL6(2), PAPSS2(1), PRMT2(2), PRMT3(3), PRMT5(2), PRMT6(2), PRMT7(6), PRMT8(3), SCLY(1), SEPHS1(3), WBSCR22(3) 6665566 42 35 42 11 11 17 2 2 10 0 0.26 1.00 1.00 514 HSA00534_HEPARAN_SULFATE_BIOSYNTHESIS Genes involved in heparan sulfate biosynthesis EXT1, EXT2, EXTL1, EXTL2, EXTL3, GLCE, HS2ST1, HS3ST1, HS3ST2, HS3ST3A1, HS3ST3B1, HS3ST5, HS6ST1, HS6ST2, HS6ST3, LOC728969, NDST1, NDST2, NDST3, NDST4 18 EXT1(2), EXT2(1), EXTL1(3), EXTL2(1), EXTL3(1), HS3ST2(2), HS3ST3A1(1), HS3ST5(4), HS6ST3(3), NDST1(4), NDST2(2), NDST3(4), NDST4(13) 5387704 41 35 41 17 12 14 5 8 2 0 0.82 1.00 1.00 515 HSA00565_ETHER_LIPID_METABOLISM Genes involved in ether lipid metabolism AGPAT1, AGPAT2, AGPAT3, AGPAT4, AGPAT6, AGPS, CHPT1, ENPP2, ENPP6, LYCAT, PAFAH1B1, PAFAH1B2, PAFAH1B3, PAFAH2, PLA2G10, PLA2G12A, PLA2G12B, PLA2G1B, PLA2G2A, PLA2G2D, PLA2G2E, PLA2G2F, PLA2G3, PLA2G4A, PLA2G5, PLA2G6, PLD1, PLD2, PPAP2A, PPAP2B, PPAP2C 30 AGPAT3(1), AGPAT4(1), AGPAT6(1), AGPS(1), CHPT1(1), ENPP2(7), ENPP6(3), PAFAH1B1(1), PLA2G2A(1), PLA2G2E(2), PLA2G2F(2), PLA2G3(2), PLA2G4A(7), PLA2G5(3), PLA2G6(5), PLD1(7), PLD2(2), PPAP2B(2) 6221634 49 35 49 22 12 20 5 6 6 0 0.91 1.00 1.00 516 SHHPATHWAY Sonic hedgehog (Shh) signaling in the developing CNS induces neuronal proliferation via interaction with the patched (Ptc-1) and smoothened receptors. DYRK1A, DYRK1B, GLI, GLI2, GLI3, GSK3B, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, PTCH, SHH, SMO, SUFU 14 DYRK1A(6), DYRK1B(3), GLI2(6), GLI3(9), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2), SHH(2), SMO(1), SUFU(2) 4514792 39 35 39 15 13 14 4 5 3 0 0.72 1.00 1.00 517 DEATHPATHWAY Death receptors such as Fas and DR3, 4, and 5 transduce pro-apoptotic signaling by oligomerizing to activate the caspase cascade. APAF1, BCL2, BID, BIRC2, BIRC3, BIRC4, CASP10, CASP3, CASP6, CASP7, CASP8, CASP9, CFLAR, CHUK, CYCS, DFFA, DFFB, FADD, GAS2, LMNA, MAP3K14, NFKB1, NFKBIA, RELA, RIPK1, SPTAN1, TNFRSF10A, TNFRSF10B, TNFRSF25, TNFSF10, TNFSF12, TRADD, TRAF2 32 APAF1(4), BIRC2(1), BIRC3(3), CASP10(3), CASP7(2), CASP8(2), CASP9(3), CFLAR(1), CHUK(2), DFFB(2), FADD(1), GAS2(3), LMNA(1), MAP3K14(1), NFKB1(2), RELA(3), SPTAN1(4), TNFRSF10A(1), TNFRSF10B(1), TRADD(1) 9001816 41 34 40 17 12 7 3 11 8 0 0.89 1.00 1.00 518 HSA00624_1_AND_2_METHYLNAPHTHALENE_DEGRADATION Genes involved in 1- and 2-methylnaphthalene degradation ACAD8, ACAD9, ADH1A, ADH1B, ADH1C, ADH4, ADH5, ADH6, ADH7, ADHFE1, ARD1A, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, ESCO1, ESCO2, LYCAT, MYST3, MYST4, NAT5, NAT6, PNPLA3, SH3GLB1 22 ACAD8(2), ACAD9(3), ADH1A(1), ADH1B(1), ADH1C(1), ADH4(3), ADH5(1), ADH7(1), ADHFE1(2), DHRS2(2), DHRSX(4), ESCO1(2), ESCO2(1), MYST3(11), MYST4(4), PNPLA3(1), SH3GLB1(1) 6688528 41 34 41 17 13 13 0 8 7 0 0.88 1.00 1.00 519 MEF2DPATHWAY Mef2 transcription factors promote calcium-induced apoptosis in T cells and are regulated by MAP kinases and histone deacetylases. CABIN1, CALM1, CALM2, CALM3, CAPN2, CAPNS1, CAPNS2, EP300, HDAC1, HDAC2, MEF2D, NFATC1, NFATC2, PPP3CA, PPP3CB, PPP3CC, PRKCA, PRKCB1, SYT1, TRA@, TRB@ 17 CABIN1(5), CALM2(1), CAPN2(2), CAPNS2(1), EP300(9), HDAC1(2), NFATC1(3), NFATC2(4), PPP3CA(4), PPP3CB(4), PPP3CC(2), PRKCA(5), SYT1(4) 6254030 46 34 45 12 15 14 5 6 6 0 0.42 1.00 1.00 520 N_GLYCAN_DEGRADATION AGA, FLJ21865, FUCA1, FUCA2, GLB1, HEXA, HEXB, LCT, MAN2C1, MANBA, NEU1, NEU2, NEU3, NEU4 13 AGA(3), FUCA1(2), FUCA2(1), HEXA(5), LCT(18), MAN2C1(6), MANBA(2), NEU1(2), NEU2(2), NEU4(2) 4461392 43 34 43 13 10 13 3 13 4 0 0.47 1.00 1.00 521 O_GLYCAN_BIOSYNTHESIS GALNT1, GALNT10, GALNT2, GALNT3, GALNT4, GALNT6, GALNT7, GALNT8, GALNT9, GCNT1, SIAT4A, SIAT4B, ST3GAL1, ST3GAL2, ST3GAL4, WBSCR17 14 GALNT1(2), GALNT10(2), GALNT2(2), GALNT3(3), GALNT6(2), GALNT8(3), GALNT9(1), GCNT1(3), ST3GAL1(4), ST3GAL4(2), WBSCR17(11) 3849606 35 34 34 14 6 14 6 5 4 0 0.81 1.00 1.00 522 PENTOSE_PHOSPHATE_PATHWAY ALDOA, ALDOB, ALDOC, FBP1, FBP2, G6PD, GPI, H6PD, PFKM, PFKP, PGD, PGLS, PGM1, PGM3, PRPS1, PRPS1L1, PRPS2, RBKS, RPE, RPE, LOC440001, RPIA, TAL1, TALDO1, TALDO1, HSUP1, TKT 23 ALDOA(1), ALDOB(2), FBP2(1), G6PD(1), GPI(5), H6PD(2), PFKM(5), PFKP(2), PGD(1), PGM1(1), PRPS1(2), PRPS1L1(3), PRPS2(1), RBKS(1), RPIA(2), TAL1(4), TALDO1(1), TKT(1) 5480086 36 34 36 15 4 12 4 7 9 0 0.78 1.00 1.00 523 PS1PATHWAY Presenilin is required for gamma-secretase activity to activate Notch signaling; presenilin also inhibits beta-catenin in the Wnt/Frizzled pathway. ADAM17, APC, AXIN1, BTRC, CTNNB1, DLL1, DVL1, FZD1, GSK3B, NOTCH1, PSEN1, RBPSUH, TCF1, WNT1 12 APC(9), BTRC(1), CTNNB1(4), DLL1(1), DVL1(3), FZD1(1), NOTCH1(16), PSEN1(3), WNT1(1) 5774142 39 34 39 12 8 13 1 6 11 0 0.60 1.00 1.00 524 TELPATHWAY Telomerase is a ribonucleotide protein that adds telomeric repeats to the 3' ends of chromosomes. AKT1, BCL2, EGFR, G22P1, HSPCA, IGF1R, KRAS2, MYC, POLR2A, PPP2CA, PRKCA, RB1, TEP1, TERF1, TERT, TNKS, TP53, XRCC5 13 AKT1(1), EGFR(7), IGF1R(1), MYC(1), POLR2A(2), PRKCA(5), TEP1(7), TERF1(3), TERT(3), TNKS(7), XRCC5(2) 6815620 39 34 38 10 14 11 1 9 4 0 0.28 1.00 1.00 525 CARBON_FIXATION ALDOA, ALDOB, ALDOC, FBP1, FBP2, GOT1, GOT2, GPT, GPT2, MDH1, MDH2, ME1, ME2, ME3, PGK1, PKLR, PKM2, RPE, RPE, LOC440001, RPIA, TKT, TPI1 21 ALDOA(1), ALDOB(2), FBP2(1), GOT2(3), GPT(1), GPT2(4), MDH1(1), MDH2(1), ME1(2), ME2(3), ME3(2), PGK1(2), PKLR(4), PKM2(3), RPIA(2), TKT(1), TPI1(3) 4793006 36 33 36 16 8 12 2 7 7 0 0.83 1.00 1.00 526 HSA00632_BENZOATE_DEGRADATION_VIA_COA_LIGATION Genes involved in benzoate degradation via CoA ligation ACAT1, ACAT2, ACOT11, ACYP1, ACYP2, ARD1A, CARKL, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, ECHS1, EHHADH, ESCO1, ESCO2, FN3K, GCDH, HADHA, ITGB1BP3, LYCAT, MYST3, MYST4, NAT5, NAT6, PNPLA3, SH3GLB1, YOD1 24 ACAT1(2), ACOT11(1), DHRS2(2), DHRSX(4), ECHS1(1), EHHADH(1), ESCO1(2), ESCO2(1), FN3K(1), GCDH(2), HADHA(2), MYST3(11), MYST4(4), PNPLA3(1), SH3GLB1(1) 6937728 36 33 36 18 10 9 1 9 7 0 0.97 1.00 1.00 527 HSA00740_RIBOFLAVIN_METABOLISM Genes involved in riboflavin metabolism ACP1, ACP2, ACP5, ACP6, ACPP, ACPT, ENPP1, ENPP3, FLAD1, LHPP, MTMR1, MTMR2, MTMR6, PHPT1, RFK, TYR 16 ACP1(2), ACP2(1), ACP6(2), ACPT(1), ENPP1(8), ENPP3(6), FLAD1(2), MTMR1(1), MTMR2(2), MTMR6(5), TYR(10) 4036684 40 33 40 11 5 18 4 4 9 0 0.47 1.00 1.00 528 NO2IL12PATHWAY Macrophages activate NK cells by releasing IL-12, which induces NK cytotoxic activity in coordination with NO produced by inducible nitric oxide synthase II. CCR5, CD2, CD3D, CD3E, CD3G, CD3Z, CD4, CXCR3, IFNG, IL12A, IL12B, IL12RB1, IL12RB2, JAK2, NOS2A, STAT4, TYK2 15 CCR5(2), CD2(1), CD3D(1), CD4(1), CXCR3(1), IFNG(1), IL12A(1), IL12B(3), IL12RB1(3), IL12RB2(4), JAK2(4), STAT4(5), TYK2(8) 3935402 35 33 35 10 8 12 2 5 8 0 0.53 1.00 1.00 529 REELINPATHWAY Reelin is secreted by neurons and recognized by receptors including cadherin related neuronal receptors, which promote phosphorylation of Dab1. CDK5, CDK5R1, DAB1, FYN, LRP8, RELN, VLDLR 7 CDK5(1), CDK5R1(1), DAB1(6), FYN(5), LRP8(1), RELN(33) 3756512 47 33 47 14 14 12 6 12 3 0 0.64 1.00 1.00 530 CDMACPATHWAY Cadmium 2+ promotes cell proliferation in cultured macrophages by entering the cell via calcium channels and activating the MAP kinase pathway. CUZD1, FOS, HRAS, JUN, MAP2K1, MAPK1, MAPK3, MYC, NFKB1, NFKBIA, PLCB1, PRKCA, PRKCB1, RAF1, RELA, TNF 15 CUZD1(2), FOS(2), HRAS(4), JUN(3), MAP2K1(2), MAPK1(1), MAPK3(1), MYC(1), NFKB1(2), PLCB1(8), PRKCA(5), RAF1(1), RELA(3), TNF(1) 4118386 36 32 35 11 12 12 4 6 2 0 0.55 1.00 1.00 531 CHEMICALPATHWAY DNA damage promotes Bid cleavage, which stimulates mitochondrial cytochrome c release and consequent caspase activation, resulting in apoptosis. ADPRT, AKT1, APAF1, ATM, BAD, BAX, BCL2, BCL2L1, BID, CASP3, CASP6, CASP7, CASP9, CYCS, EIF2S1, PRKCA, PRKCB1, PTK2, PXN, STAT1, TLN1, TP53 19 AKT1(1), APAF1(4), ATM(8), BAX(1), BCL2L1(1), CASP7(2), CASP9(3), PRKCA(5), PTK2(6), PXN(3), STAT1(2), TLN1(6) 7123738 42 32 41 12 16 12 4 8 2 0 0.58 1.00 1.00 532 CHREBPPATHWAY Carbohydrate responsive element binding protein (chREBP) is a transcription factor inhibited by cAMP and activated by high carbohydrate levels. ADCY1, BG1, BUCS1, GNAS, GNB1, GNGT1, PPP2CA, PRKAA1, PRKAA2, PRKAB1, PRKAB2, PRKACB, PRKACG, PRKAG1, PRKAG2, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, WBSCR14 17 ADCY1(10), GNAS(6), GNB1(1), PRKAA2(5), PRKAB2(1), PRKACB(3), PRKACG(1), PRKAG2(4), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2) 4090796 37 32 37 11 10 12 5 6 4 0 0.60 1.00 1.00 533 GABAPATHWAY Gamma-aminobutyric acid (GABA) is an inhibitory neurotransmitter whose receptor is regulated by Plic-1, gephyrin, and GABARAP, which promote receptor clustering. DNM1, GABARAP, GABRA1, GABRA2, GABRA3, GABRA4, GABRA5, GABRA6, GPHN, NSF, SRC, UBQLN1 11 DNM1(2), GABARAP(1), GABRA1(7), GABRA3(4), GABRA4(4), GABRA5(6), GABRA6(8), GPHN(2), NSF(2), UBQLN1(2) 2946612 38 32 38 10 7 11 5 9 6 0 0.50 1.00 1.00 534 HSA00770_PANTOTHENATE_AND_COA_BIOSYNTHESIS Genes involved in pantothenate and CoA biosynthesis BCAT1, BCAT2, COASY, DPYD, DPYS, ENPP1, ENPP3, ILVBL, PANK1, PANK2, PANK3, PANK4, PPCDC, PPCS, UPB1, VNN1 16 BCAT1(1), BCAT2(2), COASY(2), DPYD(8), DPYS(6), ENPP1(8), ENPP3(6), ILVBL(2), PANK1(1), PANK2(1), PANK3(1), PANK4(1), PPCS(1), VNN1(2) 4617676 42 32 42 14 10 15 4 4 9 0 0.65 1.00 1.00 535 ST_TUMOR_NECROSIS_FACTOR_PATHWAY Tumor necrosis factor is a pro-inflammatory cytokine that activates NF-kB and c-Jun. BAG4, BIRC2, BIRC3, CASP3, CASP8, CFLAR, FADD, HRB, IKBKG, JUN, MAP2K4, MAP3K3, MAP3K7, NFKB1, NFKB2, NFKBIA, NFKBIB, NFKBIE, NFKBIL1, NFKBIL2, NR2C2, RALBP1, RIPK1, TNF, TNFAIP3, TNFRSF1A, TNFRSF1B, TRADD, TRAF2 27 BAG4(1), BIRC2(1), BIRC3(3), CASP8(2), CFLAR(1), FADD(1), JUN(3), MAP2K4(1), MAP3K3(1), MAP3K7(2), NFKB1(2), NFKB2(2), NFKBIB(1), NFKBIE(1), NFKBIL1(2), NFKBIL2(4), NR2C2(3), RALBP1(1), TNF(1), TNFAIP3(5), TNFRSF1A(2), TNFRSF1B(1), TRADD(1) 7285184 42 32 41 17 14 18 2 3 5 0 0.81 1.00 1.00 536 TNFR2PATHWAY Tumor necrosis factor beta, produced by activated lymphocytes, binds to its receptor TNFR2 to induce activation in immune cells and apoptosis in many other cells. CHUK, DUSP1, IKBKAP, IKBKB, IKBKG, LTA, MAP3K1, MAP3K14, NFKB1, NFKBIA, RELA, RIPK1, TANK, TNFAIP3, TNFRSF1B, TRAF1, TRAF2, TRAF3 17 CHUK(2), IKBKAP(4), IKBKB(2), LTA(2), MAP3K1(3), MAP3K14(1), NFKB1(2), RELA(3), TANK(4), TNFAIP3(5), TNFRSF1B(1), TRAF1(4), TRAF3(3) 5986140 36 32 36 10 3 10 3 11 9 0 0.54 1.00 1.00 537 CFTRPATHWAY The cAMP-regulated chloride channel CFTR (deficient in cystic fibrosis) is regulated by the surface-localized beta-adrenergic receptor. ADCY1, ADRB2, CFTR, GNAS, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B, SLC9A3R1, VIL2 11 ADCY1(10), ADRB2(4), CFTR(8), GNAS(6), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2) 3481324 38 31 38 11 13 12 3 7 3 0 0.50 1.00 1.00 538 FEEDERPATHWAY Sugars such as mannose, galactose, and fructose are enzymatically converted to glucose via feeder pathways that lead to glycolysis. HK1, KHK, LCT, MPI, PGM1, PYGL, PYGM, TPI1, TREH 8 HK1(3), KHK(2), LCT(18), MPI(1), PGM1(1), PYGM(6), TPI1(3), TREH(1) 3118560 35 31 35 11 7 14 2 7 5 0 0.40 1.00 1.00 539 GLYCOSAMINOGLYCAN_DEGRADATION ARSB, GALNS, GLB1, GNS, GUSB, HEXA, HEXB, IDS, IDUA, LCT, NAGLU 11 ARSB(1), GALNS(3), GNS(1), GUSB(2), HEXA(5), IDS(1), IDUA(2), LCT(18) 3828068 33 31 33 12 10 12 1 5 5 0 0.60 1.00 1.00 540 MYOSINPATHWAY Myosin light chain kinase phosphorylates myosin and promotes muscle contraction and platelet formation; myosin phosphatase antagonizes these processes. ARHGAP5, ARHGEF1, GNA12, GNA13, GNAQ, GNB1, GNGT1, MYL2, MYLK, PLCB1, PPP1R12B, PRKCA, PRKCB1, PRKCL1, ROCK1 13 ARHGAP5(2), ARHGEF1(2), GNA12(2), GNA13(1), GNB1(1), MYL2(2), MYLK(8), PLCB1(8), PPP1R12B(5), PRKCA(5), ROCK1(5) 5541852 41 31 41 11 15 14 3 6 3 0 0.51 1.00 1.00 541 CITRATE_CYCLE_TCA_CYCLE ACO1, ACO2, CS, DLD, DLST, DLSTP, FH, IDH1, IDH2, IDH3A, IDH3B, IDH3G, MDH1, MDH2, PC, PCK1, SDHA, SDHA, SDHAL2, SDHB, SUCLA2, SUCLG1, SUCLG2 20 ACO1(2), ACO2(3), DLD(2), DLST(1), FH(2), IDH1(2), IDH3A(1), IDH3B(4), IDH3G(2), MDH1(1), MDH2(1), PC(2), PCK1(2), SDHA(3), SDHB(2), SUCLA2(2), SUCLG2(1) 5468516 33 30 33 13 8 13 1 6 5 0 0.77 1.00 1.00 542 HSA00271_METHIONINE_METABOLISM Genes involved in methionine metabolism AHCY, AMD1, BHMT, CBS, CTH, DNMT1, DNMT3A, DNMT3B, KIAA0828, MARS, MARS2, MAT1A, MAT2B, MTAP, MTFMT, MTR, SRM, TAT 17 AHCY(1), AMD1(1), BHMT(2), CBS(4), DNMT1(4), DNMT3A(7), DNMT3B(4), MARS(1), MAT1A(1), MTAP(1), MTR(7), TAT(1) 5590268 34 30 34 13 11 11 1 7 4 0 0.75 1.00 1.00 543 HSA00602_GLYCOSPHINGOLIPID_BIOSYNTHESIS_NEO_LACTOSERIES Genes involved in glycosphingolipid biosynthesis - neo-lactoseries ABO, B3GNT1, B3GNT2, B3GNT3, B3GNT4, B3GNT5, B4GALT1, B4GALT2, B4GALT3, B4GALT4, FUT1, FUT2, FUT3, FUT4, FUT5, FUT6, FUT7, FUT9, GCNT2, ST3GAL6, ST8SIA1 21 ABO(1), B3GNT2(1), B3GNT3(4), B3GNT4(1), B4GALT1(1), B4GALT3(3), B4GALT4(3), FUT2(1), FUT3(3), FUT5(4), FUT6(2), FUT9(5), GCNT2(2), ST3GAL6(2), ST8SIA1(3) 4307422 36 30 36 13 7 17 5 5 2 0 0.59 1.00 1.00 544 SA_TRKA_RECEPTOR The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth. AKT1, AKT2, AKT3, ARHA, CDKN1A, ELK1, GRB2, HRAS, MAP2K1, MAP2K2, NGFB, NGFR, NTRK1, PIK3CA, PIK3CD, SHC1, SOS1 14 AKT1(1), AKT3(3), CDKN1A(2), HRAS(4), MAP2K1(2), MAP2K2(1), NGFR(1), NTRK1(4), PIK3CD(4), SHC1(2), SOS1(11) 3785526 35 30 35 12 7 17 2 5 4 0 0.55 1.00 1.00 545 STILBENE_COUMARINE_AND_LIGNIN_BIOSYNTHESIS EPX, GBA3, LPO, MPO, PRDX1, PRDX2, PRDX5, PRDX6, TPO, TYR 9 EPX(4), LPO(2), MPO(4), PRDX1(1), PRDX6(2), TPO(10), TYR(10) 2331622 33 30 33 10 7 15 4 5 2 0 0.40 1.00 1.00 546 HSA00670_ONE_CARBON_POOL_BY_FOLATE Genes involved in one carbon pool by folate ALDH1L1, AMT, ATIC, DHFR, FTCD, GART, MTFMT, MTHFD1, MTHFD1L, MTHFD2, MTHFR, MTHFS, MTR, SHMT1, SHMT2, TYMS 16 ALDH1L1(5), ATIC(1), FTCD(3), GART(3), MTHFD1(4), MTHFD1L(2), MTHFD2(4), MTHFR(2), MTR(7) 5085460 31 29 31 10 13 9 2 4 3 0 0.56 1.00 1.00 547 STRESSPATHWAY Tumor necrosis factor receptor TNFR1 promotes apoptosis and activates the pro-inflammatory NF-kB, while TNFR2 activates stress-activated protein kinases (SAPKs). ATF1, CASP2, CHUK, CRADD, IKBKB, IKBKG, JUN, LTA, MAP2K3, MAP2K4, MAP2K6, MAP3K1, MAP3K14, MAP4K2, MAPK14, MAPK8, NFKB1, NFKBIA, RELA, RIPK1, TANK, TNF, TNFRSF1A, TRADD, TRAF2 24 CASP2(1), CHUK(2), CRADD(1), IKBKB(2), JUN(3), LTA(2), MAP2K3(3), MAP2K4(1), MAP2K6(2), MAP3K1(3), MAP3K14(1), MAP4K2(1), MAPK14(1), MAPK8(2), NFKB1(2), RELA(3), TANK(4), TNF(1), TNFRSF1A(2), TRADD(1) 6481158 38 29 37 16 9 11 2 8 8 0 0.86 1.00 1.00 548 HSA00361_GAMMA_HEXACHLOROCYCLOHEXANE_DEGRADATION Genes involved in gamma-hexachlorocyclohexane degradation ACP1, ACP2, ACP5, ACP6, ACPP, ACPT, ALPI, ALPL, ALPP, ALPPL2, CMBL, CYP3A4, CYP3A43, CYP3A5, CYP3A7, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, PON1, PON2, PON3 23 ACP1(2), ACP2(1), ACP6(2), ACPT(1), ALPL(3), ALPP(3), ALPPL2(1), CMBL(3), CYP3A4(1), CYP3A43(4), CYP3A7(1), DHRS2(2), DHRSX(4), PON1(6), PON2(1), PON3(1) 4831988 36 28 36 15 10 12 3 7 4 0 0.79 1.00 1.00 549 PGC1APATHWAY PCG-1a is expressed in skeletal muscle, heart muscle, and brown fat, and is a coactivator for receptors such as glucocorticoid receptor and thyroid hormone receptor. CALM1, CALM2, CALM3, CAMK1, CAMK1G, CAMK2A, CAMK2B, CAMK2D, CAMK2G, CAMK4, ESRRA, HDAC5, MEF2A, MEF2B, MEF2C, MEF2D, PPARA, PPARGC1, PPP3CA, PPP3CB, PPP3CC, SLC2A4, SYT1, YWHAH 22 CALM2(1), CAMK1G(3), CAMK2A(1), CAMK2B(2), CAMK2D(1), CAMK4(3), HDAC5(1), MEF2A(3), MEF2C(4), PPARA(1), PPP3CA(4), PPP3CB(4), PPP3CC(2), SLC2A4(2), SYT1(4) 5221096 36 28 36 12 11 13 4 4 4 0 0.62 1.00 1.00 550 PMLPATHWAY Ring-shaped PML nuclear bodies regulate transcription and are required co-activators in p53- and DAXX-mediated apoptosis. CREBBP, DAXX, HRAS, PAX3, PML, PRAM-1, RARA, RB1, SIRT1, SP100, TNF, TNFRSF1A, TNFRSF1B, TNFRSF6, TNFSF6, TP53, UBL1 11 CREBBP(17), DAXX(3), HRAS(4), PAX3(4), RARA(1), SIRT1(1), SP100(3), TNF(1), TNFRSF1A(2), TNFRSF1B(1) 4436828 37 28 37 10 7 14 4 9 3 0 0.42 1.00 1.00 551 SA_CASPASE_CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. ADPRT, APAF1, BIRC2, BIRC3, BIRC4, CASP10, CASP3, CASP7, CASP8, CASP9, DFFA, DFFB, GZMB, PRF1, SCAP, SREBF1, SREBF2, TNFRSF6, TNFSF6 15 APAF1(4), BIRC2(1), BIRC3(3), CASP10(3), CASP7(2), CASP8(2), CASP9(3), DFFB(2), GZMB(1), PRF1(2), SCAP(4), SREBF1(2), SREBF2(3) 4901230 32 28 31 12 10 7 2 9 4 0 0.76 1.00 1.00 552 EGFR_SMRTEPATHWAY EGF receptor activation inhibits SMRT, a transcriptional co-repressor that interacts with transcription factor complexes and gene silencers. EGF, EGFR, MAP2K1, MAP3K1, MAPK14, NCOR2, RARA, RXRA, THRA, THRB, ZNF145 10 EGF(6), EGFR(7), MAP2K1(2), MAP3K1(3), MAPK14(1), NCOR2(6), RARA(1), RXRA(2), THRA(1), THRB(2) 4603436 31 27 30 13 6 13 0 9 3 0 0.83 1.00 1.00 553 IL22BPPATHWAY IL-22 is produced by T cells and induces the acute phase inflammatory response in hepatocytes. IL10RA, IL22, IL22RA1, IL22RA2, JAK1, JAK2, JAK3, SOCS3, STAT1, STAT3, STAT5A, STAT5B, TYK2 13 IL10RA(2), IL22(2), IL22RA2(1), JAK1(2), JAK2(4), JAK3(7), SOCS3(1), STAT1(2), STAT3(2), STAT5A(2), TYK2(8) 4962106 33 27 33 10 9 13 2 4 5 0 0.37 1.00 1.00 554 METHIONINE_METABOLISM AHCY, BHMT, CBS, CTH, DNMT1, DNMT2, DNMT3A, DNMT3B, MARS, MARS2, MAT1A, MAT2B, MTR 12 AHCY(1), BHMT(2), CBS(4), DNMT1(4), DNMT3A(7), DNMT3B(4), MARS(1), MAT1A(1), MTR(7) 4679264 31 27 31 12 9 11 1 7 3 0 0.75 1.00 1.00 555 MTA3PATHWAY The estrogen receptor regulates proliferation in mammary epithelia via MTA3 activation; loss of either protein is implicated in breast cancer. ALDOA, CTSD, ESR1, GAPD, GREB1, HSPB1, HSPB2, MTA1, MTA3, PDZK1, TUBA1, TUBA2, TUBA3, TUBA4, TUBA6, TUBA8 10 ALDOA(1), CTSD(2), ESR1(6), GREB1(13), HSPB2(1), MTA1(1), MTA3(2), TUBA8(1) 2941094 27 27 27 13 3 12 2 9 1 0 0.89 1.00 1.00 556 N_GLYCAN_BIOSYNTHESIS ALG3, ALG5, B4GALT1, B4GALT2, B4GALT3, B4GALT5, DDOST, DPAGT1, DPM1, FUT8, GCS1, MAN1A1, MAN1B1, MGAT1, MGAT2, MGAT3, MGAT4A, MGAT4B, MGAT5, RPN1, RPN2, ST6GAL1 21 ALG5(2), B4GALT1(1), B4GALT3(3), B4GALT5(2), DDOST(1), DPM1(1), FUT8(2), MAN1A1(4), MGAT1(2), MGAT2(2), MGAT3(4), MGAT4A(2), MGAT4B(1), MGAT5(5), RPN1(1), ST6GAL1(2) 5334838 35 27 35 17 12 15 2 4 2 0 0.89 1.00 1.00 557 ONE_CARBON_POOL_BY_FOLATE ALDH1L1, AMT, ATIC, ATP6V0C, SHMT1, DHFR, GART, MTHFD1, MTHFD1L, MTHFD2, MTHFR, MTHFS, MTR, SHMT1, SHMT2, TYMS 15 ALDH1L1(5), ATIC(1), GART(3), MTHFD1(4), MTHFD1L(2), MTHFD2(4), MTHFR(2), MTR(7) 4793184 28 27 28 10 13 8 1 4 2 0 0.65 1.00 1.00 558 PANTOTHENATE_AND_COA_BIOSYNTHESIS BCAT1, COASY, DPYD, DPYS, ENPP1, ENPP3, PANK1, PANK2, PANK3, PANK4, PPCS, UPB1 12 BCAT1(1), COASY(2), DPYD(8), DPYS(6), ENPP1(8), ENPP3(6), PANK1(1), PANK2(1), PANK3(1), PANK4(1), PPCS(1) 3726786 36 27 36 13 9 12 3 3 9 0 0.78 1.00 1.00 559 SA_DIACYLGLYCEROL_SIGNALING DAG (diacylglycerol) signaling activity ESR1, ESR2, ITPKA, PDE1A, PDE1B, PLCB1, PLCB2, PRL, TRH, VIP 10 ESR1(6), ESR2(2), ITPKA(1), PDE1A(2), PDE1B(3), PLCB1(8), PLCB2(5), PRL(1), VIP(1) 2974380 29 27 29 14 8 14 0 6 1 0 0.93 1.00 1.00 560 CASPASEPATHWAY Caspases are cysteine proteases active in apoptosis; caspase-8 and 9 cleave and activate other caspases, while 3, 6, and 7 cleave cellular targets. ADPRT, APAF1, ARHGDIB, BIRC2, BIRC3, BIRC4, CASP1, CASP10, CASP2, CASP3, CASP4, CASP6, CASP7, CASP8, CASP9, CYCS, DFFA, DFFB, GZMB, LMNA, LMNB1, LMNB2, PRF1 21 APAF1(4), ARHGDIB(2), BIRC2(1), BIRC3(3), CASP1(1), CASP10(3), CASP2(1), CASP4(4), CASP7(2), CASP8(2), CASP9(3), DFFB(2), GZMB(1), LMNA(1), PRF1(2) 5193684 32 26 31 12 9 7 1 8 7 0 0.84 1.00 1.00 561 HSA00290_VALINE_LEUCINE_AND_ISOLEUCINE_BIOSYNTHESIS Genes involved in valine, leucine and isoleucine biosynthesis BCAT1, BCAT2, IARS, IARS2, ILVBL, LARS, LARS2, PDHA1, PDHA2, PDHB, VARS, VARS2 12 BCAT1(1), BCAT2(2), IARS(3), IARS2(3), ILVBL(2), LARS(1), LARS2(3), PDHA1(3), PDHA2(8), VARS(4), VARS2(1) 4937186 31 26 31 10 7 13 2 6 3 0 0.60 1.00 1.00 562 ACE_INHIBITOR_PATHWAY_PHARMGKB ACE, AGT, AGTR1, AGTR2, BDKRB2, KNG1, NOS3, REN 8 ACE(4), AGT(1), AGTR1(5), AGTR2(3), BDKRB2(3), KNG1(9), NOS3(2) 2684062 27 25 27 10 5 12 2 4 4 0 0.61 1.00 1.00 563 AKAPCENTROSOMEPATHWAY Protein Kinase A at the Centrosome AKAP9, ARHA, CDC2, MAP2, PCNT1, PCNT2, PPP1CA, PPP2CA, PRKACB, PRKACG, PRKAG1, PRKAR2A, PRKAR2B, PRKCE, PRKCL1 10 AKAP9(11), MAP2(9), PRKACB(3), PRKACG(1), PRKAR2B(2), PRKCE(3) 4865096 29 25 29 10 8 10 2 5 4 0 0.85 1.00 1.00 564 CCR5PATHWAY CCR5 is a G-protein coupled receptor expressed in macrophages that recognizes chemokine ligands and is targeted by the HIV envelope protein GP120. CALM1, CALM2, CALM3, CCL2, CCL4, CCR5, CXCL12, CXCR4, FOS, GNAQ, JUN, MAPK14, MAPK8, PLCG1, PRKCA, PRKCB1, PTK2B, SYT1 17 CALM2(1), CCR5(2), CXCR4(5), FOS(2), JUN(3), MAPK14(1), MAPK8(2), PLCG1(3), PRKCA(5), SYT1(4) 3663418 28 25 27 11 11 9 3 3 2 0 0.77 1.00 1.00 565 ERK5PATHWAY Signaling between a tissue and its innervating axon stimulates retrograde transport via Trk receptors, which activate Erk5, which induces transcription of anti-apoptotic factors. AKT1, CREB1, GRB2, HRAS, MAPK1, MAPK3, MAPK7, MEF2A, MEF2B, MEF2C, MEF2D, NTRK1, PIK3CA, PIK3R1, PLCG1, RPS6KA1, SHC1 15 AKT1(1), CREB1(1), HRAS(4), MAPK1(1), MAPK3(1), MAPK7(1), MEF2A(3), MEF2C(4), NTRK1(4), PIK3R1(2), PLCG1(3), RPS6KA1(2), SHC1(2) 4260074 29 25 29 12 10 12 2 3 2 0 0.76 1.00 1.00 566 GATA3PATHWAY GATA-3 is a transcription factor that promotes differentiation of helper T cells into Th2 cells, which secrete cytokines IL4, IL5, and IL13. GATA3, IL13, IL4, IL5, JUNB, MAF, MAP2K3, MAPK14, NFATC1, NFATC2, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B 16 GATA3(6), IL4(2), MAF(1), MAP2K3(3), MAPK14(1), NFATC1(3), NFATC2(4), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2) 3267546 30 25 30 15 7 13 2 4 4 0 0.89 1.00 1.00 567 HSA00563_GLYCOSYLPHOSPHATIDYLINOSITOL_ANCHOR_BIOSYNTHESIS Genes involved in glycosylphosphatidylinositol(GPI)-anchor biosynthesis GPAA1, GPLD1, PGAP1, PIGA, PIGB, PIGC, PIGF, PIGG, PIGH, PIGK, PIGL, PIGM, PIGN, PIGO, PIGP, PIGQ, PIGS, PIGT, PIGU, PIGV, PIGW, PIGX, PIGZ 23 GPAA1(3), GPLD1(1), PGAP1(4), PIGB(1), PIGF(1), PIGG(4), PIGH(1), PIGK(1), PIGL(2), PIGN(1), PIGO(2), PIGQ(1), PIGT(1), PIGW(2), PIGX(1), PIGZ(2) 6416188 28 25 28 18 5 11 3 4 5 0 0.98 1.00 1.00 568 HSA00940_PHENYLPROPANOID_BIOSYNTHESIS Genes involved in phenylpropanoid biosynthesis EPX, GBA, GBA3, LPO, MPO, PRDX6, TPO 6 EPX(4), GBA(4), LPO(2), MPO(4), PRDX6(2), TPO(10) 1997694 26 25 26 10 7 9 4 6 0 0 0.68 1.00 1.00 569 NKCELLSPATHWAY Natural killer (NK) lymphocytes are inhibited by MHC and activated by surface glycoproteins on tumor or virus-infected cells, which undergo perforin-mediated lysis. B2M, HLA-A, IL18, ITGB1, KLRC1, KLRC2, KLRC3, KLRC4, KLRD1, LAT, MAP2K1, MAPK3, PAK1, PIK3CA, PIK3R1, PTK2B, PTPN6, RAC1, SYK, VAV1 18 B2M(2), ITGB1(5), KLRC1(1), KLRC3(2), KLRD1(1), MAP2K1(2), MAPK3(1), PAK1(2), PIK3R1(2), RAC1(1), SYK(1), VAV1(7) 4190476 27 25 27 11 11 8 1 6 1 0 0.82 1.00 1.00 570 CERAMIDEPATHWAY Ceramide is a lipid signaling molecule that can activate proliferative or apoptotic pathways, depending on signaling context, localization, and cell type. BAD, BAX, BCL2, CASP8, CYCS, FADD, MAP2K1, MAP2K4, MAP3K1, MAPK1, MAPK3, MAPK8, NFKB1, NSMAF, PDCD8, RAF1, RELA, RIPK1, SMPD1, TNFRSF1A, TRADD, TRAF2 21 BAX(1), CASP8(2), FADD(1), MAP2K1(2), MAP2K4(1), MAP3K1(3), MAPK1(1), MAPK3(1), MAPK8(2), NFKB1(2), NSMAF(4), RAF1(1), RELA(3), SMPD1(4), TNFRSF1A(2), TRADD(1) 5491478 31 24 31 15 8 9 1 9 4 0 0.94 1.00 1.00 571 GCRPATHWAY Corticosteroids activate the glucocorticoid receptor (GR), which inhibits NF-kB and activates Annexin-1, thus inhibiting the inflammatory response. ADRB2, AKT1, ANXA1, CALM1, CALM2, CALM3, CRN, GNAS, GNB1, GNGT1, HSPCA, NFKB1, NOS3, NPPA, NR3C1, PIK3CA, PIK3R1, RELA, SYT1 16 ADRB2(4), AKT1(1), ANXA1(1), CALM2(1), GNAS(6), GNB1(1), NFKB1(2), NOS3(2), NR3C1(1), PIK3R1(2), RELA(3), SYT1(4) 4189942 28 24 28 12 10 6 4 5 3 0 0.91 1.00 1.00 572 HIFPATHWAY Under normal conditions, hypoxia inducible factor HIF-1 is degraded; under hypoxic conditions, it activates transcription of genes controlled by hpoxic response elements (HREs). ARNT, ASPH, COPS5, CREB1, EDN1, EP300, EPO, HIF1A, HSPCA, JUN, LDHA, NOS3, P4HB, VEGF, VHL 13 ARNT(1), ASPH(4), COPS5(2), CREB1(1), EP300(9), HIF1A(1), JUN(3), NOS3(2), P4HB(4), VHL(1) 4585636 28 24 26 13 10 6 0 9 3 0 0.94 1.00 1.00 573 HSA00533_KERATAN_SULFATE_BIOSYNTHESIS Genes involved in keratan sulfate biosynthesis B3GNT1, B3GNT2, B3GNT7, B4GALT1, B4GALT2, B4GALT3, B4GALT4, CHST1, CHST2, CHST4, CHST6, FUT8, ST3GAL1, ST3GAL2, ST3GAL3, ST3GAL4 16 B3GNT2(1), B3GNT7(1), B4GALT1(1), B4GALT3(3), B4GALT4(3), CHST1(2), CHST2(4), CHST4(2), CHST6(5), FUT8(2), ST3GAL1(4), ST3GAL4(2) 3335186 30 24 30 11 7 19 2 2 0 0 0.47 1.00 1.00 574 TH1TH2PATHWAY Helper T subtype Th1 produces pro-inflammatory cytokines that stimulate phagocytosis, while Th2 cells promote antibody production and activate eosinophils. CD28, CD86, HLA-DRA, HLA-DRB1, IFNG, IFNGR1, IFNGR2, IL12A, IL12B, IL12RB1, IL12RB2, IL18, IL18R1, IL2, IL2RA, IL4, IL4R, TNFRSF5, TNFSF5 17 CD86(3), HLA-DRA(1), HLA-DRB1(2), IFNG(1), IFNGR1(4), IFNGR2(1), IL12A(1), IL12B(3), IL12RB1(3), IL12RB2(4), IL18R1(2), IL4(2), IL4R(2) 3388764 29 24 29 10 12 7 0 4 6 0 0.74 1.00 1.00 575 ACTINYPATHWAY The Arp 2/3 complex localizes to the Y-junction of polymerizing actin fibers that enable lamellipod extension and consequent cell motility. ABI-2, ACTA1, ACTR2, ACTR3, ARPC1A, ARPC1B, ARPC2, ARPC3, ARPC4, NCK1, NCKAP1, NTRK1, PIR, PSMA7, RAC1, WASF1, WASF2, WASF3, WASL 18 ACTA1(3), ARPC1A(4), NCK1(2), NCKAP1(7), NTRK1(4), RAC1(1), WASF1(1), WASF3(1), WASL(2) 4095602 25 23 24 15 6 7 0 6 6 0 0.99 1.00 1.00 576 HSA00642_ETHYLBENZENE_DEGRADATION Genes involved in ethylbenzene degradation ARD1A, DHRS1, DHRS2, DHRS3, DHRS7, DHRSX, ESCO1, ESCO2, LYCAT, MYST3, MYST4, NAT5, NAT6, PNPLA3, SH3GLB1 12 DHRS2(2), DHRSX(4), ESCO1(2), ESCO2(1), MYST3(11), MYST4(4), PNPLA3(1), SH3GLB1(1) 4429174 26 23 26 12 8 6 0 7 5 0 0.93 1.00 1.00 577 HSA00680_METHANE_METABOLISM Genes involved in methane metabolism ADH5, CAT, EPX, LPO, MPO, MTHFR, PRDX6, SHMT1, SHMT2, TPO 10 ADH5(1), EPX(4), LPO(2), MPO(4), MTHFR(2), PRDX6(2), TPO(10) 3102896 25 23 25 12 8 9 3 5 0 0 0.86 1.00 1.00 578 HSA04130_SNARE_INTERACTIONS_IN_VESICULAR_TRANSPORT Genes involved in SNARE interactions in vesicular transport BET1, BET1L, BNIP1, C1orf142, GOSR1, GOSR2, SEC22B, SNAP23, SNAP25, SNAP29, STX10, STX11, STX12, STX16, STX17, STX18, STX19, STX2, STX3, STX4, STX5, STX6, STX7, STX8, TSNARE1, USE1, VAMP1, VAMP2, VAMP3, VAMP4, VAMP5, VAMP7, VAMP8, VTI1A, VTI1B, YKT6 35 BNIP1(2), GOSR1(1), SEC22B(4), SNAP23(1), SNAP25(1), STX10(1), STX11(2), STX16(1), STX19(2), STX2(1), STX5(2), STX7(1), TSNARE1(2), USE1(1), VAMP7(3), YKT6(1) 4516750 26 23 26 13 10 5 3 5 3 0 0.94 1.00 1.00 579 METHANE_METABOLISM ADH5, ATP6V0C, SHMT1, CAT, EPX, LPO, MPO, PRDX1, PRDX2, PRDX5, PRDX6, SHMT1, SHMT2, TPO 13 ADH5(1), EPX(4), LPO(2), MPO(4), PRDX1(1), PRDX6(2), TPO(10) 3150600 24 23 24 13 7 8 4 5 0 0 0.94 1.00 1.00 580 DREAMPATHWAY The transcription factor DREAM blocks expression of the prodynorphin gene, which encodes the ligand of an opioid receptor that blocks pain signaling. CREB1, CREM, CSEN, FOS, JUN, MAPK3, OPRK1, POLR2A, PRKACB, PRKACG, PRKAR1A, PRKAR1B, PRKAR2A, PRKAR2B 13 CREB1(1), CREM(2), FOS(2), JUN(3), MAPK3(1), OPRK1(1), POLR2A(2), PRKACB(3), PRKACG(1), PRKAR1A(2), PRKAR1B(2), PRKAR2B(2) 3426322 22 21 21 10 7 7 0 5 3 0 0.85 1.00 1.00 581 GPCRDB_CLASS_A_RHODOPSIN_LIKE2 CYSLTR1, CYSLTR2, GPR109B, GPR161, GPR171, GPR18, GPR34, GPR39, GPR41, GPR42, GPR45, GPR65, GPR68, GPR75, GPR81, LYPDC1 13 CYSLTR1(2), CYSLTR2(1), GPR109B(2), GPR161(2), GPR171(2), GPR18(2), GPR34(1), GPR39(2), GPR45(4), GPR65(3), GPR68(1), GPR75(2), GPR81(1) 2602716 25 21 25 11 8 8 0 8 1 0 0.67 1.00 1.00 582 HCMVPATHWAY Cytomegalovirus activates MAP kinase pathways in the host cell, inducing transcription of viral genes. AKT1, CREB1, MAP2K1, MAP2K2, MAP2K3, MAP2K6, MAP3K1, MAPK1, MAPK14, MAPK3, NFKB1, PIK3CA, PIK3R1, RB1, RELA, SP1 14 AKT1(1), CREB1(1), MAP2K1(2), MAP2K2(1), MAP2K3(3), MAP2K6(2), MAP3K1(3), MAPK1(1), MAPK14(1), MAPK3(1), NFKB1(2), PIK3R1(2), RELA(3), SP1(2) 4113046 25 21 25 11 5 11 1 6 2 0 0.87 1.00 1.00 583 HSA03020_RNA_POLYMERASE Genes involved in RNA polymerase POLR1A, POLR1B, POLR1C, POLR1D, POLR2A, POLR2B, POLR2C, POLR2D, POLR2E, POLR2F, POLR2G, POLR2H, POLR2I, POLR2J, POLR2K, POLR2L, POLR3A, POLR3B, POLR3G, POLR3GL, POLR3H, POLR3K, ZNRD1 23 POLR1A(3), POLR1B(2), POLR1D(1), POLR2A(2), POLR2B(6), POLR2D(1), POLR2E(2), POLR3A(1), POLR3B(2), POLR3G(1), POLR3H(2) 6288206 23 21 23 13 9 7 1 2 4 0 0.95 1.00 1.00 584 HSA00532_CHONDROITIN_SULFATE_BIOSYNTHESIS Genes involved in chondroitin sulfate biosynthesis B3GALT6, B3GAT1, B3GAT2, B3GAT3, B4GALT7, ChGn, CHPF, CHST11, CHST12, CHST13, CHST14, CHST3, CHST7, CHSY-2, CHSY1, CSGlcA-T, DSE, GALNAC4S-6ST, GALNACT-2, UST, XYLT1, XYLT2 15 B3GAT1(2), B3GAT2(2), CHPF(2), CHST11(2), CHST12(1), CHST3(2), CHSY1(2), DSE(4), UST(1), XYLT1(5) 3666978 23 20 23 11 3 8 1 8 3 0 0.87 1.00 1.00 585 HSA04710_CIRCADIAN_RHYTHM Genes involved in circadian rhythm ARNTL, BHLHB2, BHLHB3, CLOCK, CRY1, CRY2, CSNK1D, CSNK1E, NPAS2, NR1D1, PER1, PER2, PER3 11 ARNTL(2), CLOCK(5), CRY1(2), CRY2(2), CSNK1D(2), NPAS2(1), PER1(5), PER2(2), PER3(2) 4598986 23 20 23 10 7 7 3 5 1 0 0.87 1.00 1.00 586 SA_MMP_CYTOKINE_CONNECTION Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix. ACE, CD44, CSF1, FCGR3A, IL1B, IL6R, SELL, SPN, TGFB1, TGFB2, TNF, TNFRSF1A, TNFRSF1B, TNFRSF8, TNFSF8 15 ACE(4), CD44(5), CSF1(2), FCGR3A(4), IL1B(1), IL6R(1), SELL(2), TGFB1(1), TGFB2(3), TNF(1), TNFRSF1A(2), TNFRSF1B(1), TNFRSF8(1) 3574774 28 20 28 10 7 10 2 5 4 0 0.70 1.00 1.00 587 ACHPATHWAY Nicotinic acetylcholine receptors are ligand-gated ion channels that primarily mediate neuromuscular signaling and may inhibit neuronal apoptosis via the AKT pathway. AKT1, BAD, CHRNB1, CHRNG, FOXO3A, MUSK, PIK3CA, PIK3R1, PTK2, PTK2B, RAPSN, SRC, TERT, TNFSF6, YWHAH 12 AKT1(1), CHRNB1(1), CHRNG(4), MUSK(2), PIK3R1(2), PTK2(6), RAPSN(3), TERT(3) 3761140 22 19 22 12 12 8 0 1 1 0 0.86 1.00 1.00 588 HSA03010_RIBOSOME Genes involved in ribosome C15orf15, FAU, hCG_1644323, hCG_1984468, hCG_2041321, hCG_21078, hCG_26523, LOC283412, LOC284064, LOC284230, LOC284288, LOC284393, LOC285053, LOC342994, LOC347292, LOC388720, LOC389342, LOC390876, LOC391656, LOC400652, LOC402057, LOC439992, LOC440055, LOC440589, LOC440733, LOC440737, LOC441377, LOC441876, LOC441907, MRPL13, MRPS7, RPL10A, RPL10L, RPL11, RPL12, RPL13, RPL13A, RPL14, RPL18, RPL18A, RPL19, RPL21, RPL22L1, RPL23A, RPL23AP2, RPL24, RPL26, RPL27, RPL27A, RPL28, RPL29, RPL3, RPL30, RPL31, RPL32, RPL34, RPL35, RPL35A, RPL36A, RPL36AL, RPL37, RPL37A, RPL38, RPL39, RPL3L, RPL41, RPL6, RPL7, RPL8, RPL9, RPS10, RPS11, RPS12, RPS13, RPS15A, RPS16, RPS18, RPS2, RPS20, RPS21, RPS23, RPS24, RPS25, RPS26, RPS26P10, RPS27, RPS28, RPS29, RPS3, RPS3A, RPS4Y1, RPS5, RPS6, RPS7, RPS8, RPS9, RPSA, tcag7.23 66 RPL13(1), RPL14(1), RPL19(1), RPL32(1), RPL37(1), RPL3L(2), RPL7(1), RPL8(2), RPS11(1), RPS12(1), RPS18(1), RPS2(1), RPS20(1), RPS21(1), RPS26(1), RPS6(1), RPS8(1) 6076564 19 19 19 13 7 3 0 7 2 0 0.98 1.00 1.00 589 HSP27PATHWAY Hsp27 oligomers have molecular chaperone activity and protect heat-stressed cells against apoptosis. ACTA1, APAF1, BCL2, CASP3, CASP9, CYCS, DAXX, FAS, FASLG, HSPB1, HSPB2, IL1A, MAPKAPK2, MAPKAPK3, TNF, TNFRSF6 15 ACTA1(3), APAF1(4), CASP9(3), DAXX(3), FAS(1), FASLG(1), HSPB2(1), IL1A(1), MAPKAPK2(2), MAPKAPK3(1), TNF(1) 3025288 21 19 20 13 8 5 1 4 3 0 0.99 1.00 1.00 590 IGF1MTORPATHWAY Growth factor IGF-1 activates AKT, Gsk3-beta, and mTOR to promote muscle hypertrophy. AKT1, EIF2B5, EIF2S1, EIF2S2, EIF2S3, EIF4E, EIF4EBP1, FRAP1, GSK3B, IGF1, IGF1R, INPPL1, PDK2, PDPK1, PIK3CA, PIK3R1, PPP2CA, PTEN, RPS6, RPS6KB1 17 AKT1(1), EIF2B5(3), EIF2S2(1), IGF1(3), IGF1R(1), INPPL1(4), PDK2(2), PDPK1(1), PIK3R1(2), RPS6(1), RPS6KB1(1) 4460858 20 19 20 10 8 6 2 0 4 0 0.91 1.00 1.00 591 TCYTOTOXICPATHWAY Cytotoxic T cells release perforin and granzyme to lyse foreign cell targets and express Fas ligand to promote Fas-induced apoptosis. CD2, CD28, CD3D, CD3E, CD3G, CD3Z, CD8A, ICAM1, ITGAL, ITGB2, PTPRC, THY1, TRA@, TRB@ 11 CD2(1), CD3D(1), CD8A(2), ICAM1(2), ITGAL(1), ITGB2(5), PTPRC(7), THY1(2) 2879684 21 19 21 9 6 6 1 8 0 0 0.84 1.00 1.00 592 THELPERPATHWAY Helper T cells coordinate the actions of B cells, macrophages, and other immune cells via surface molecules such as T cell receptor/CD3 and their characteristic marker CD4. CD2, CD28, CD3D, CD3E, CD3G, CD3Z, CD4, ICAM1, ITGAL, ITGB2, PTPRC, THY1, TRA@, TRB@ 11 CD2(1), CD3D(1), CD4(1), ICAM1(2), ITGAL(1), ITGB2(5), PTPRC(7), THY1(2) 3022084 20 19 20 10 6 5 1 7 1 0 0.91 1.00 1.00 593 EICOSANOID_SYNTHESIS ALOX12, ALOX15, ALOX15B, ALOX5, ALOX5AP, DPEP1, GGT1, IPLA2(GAMMA), LTA4H, LTC4S, PLA2G2A, PLA2G6, PTGDS, PTGES, PTGIS, PTGS1, PTGS2, TBXAS1 17 ALOX15(3), ALOX15B(1), DPEP1(3), GGT1(1), LTA4H(2), PLA2G2A(1), PLA2G6(5), PTGES(1), PTGS1(2), TBXAS1(2) 4022444 21 18 21 8 4 13 1 3 0 0 0.57 1.00 1.00 594 ERYTHPATHWAY Erythropoietin selectively stimulates erythrocyte differentiation from CFU-GEMM cells in bone marrow. CCL3, CSF2, CSF3, EPO, FLT3, IGF1, IL11, IL1A, IL3, IL6, IL9, KITLG, TGFB1, TGFB2, TGFB3 14 CCL3(2), FLT3(7), IGF1(3), IL1A(1), IL3(1), IL6(1), TGFB1(1), TGFB2(3) 2184238 19 17 19 11 6 7 1 5 0 0 0.96 1.00 1.00 595 HYPERTROPHY_MODEL ADAM10, ANKRD1, ATF3, CYR61, DUSP14, EIF4E, EIF4EBP1, GDF8, HBEGF, IFNG, IFRD1, IL18, IL1A, IL1R1, JUND, MYOG, NR4A3, TCF8, VEGF, WDR1 17 ADAM10(4), ATF3(1), HBEGF(1), IFNG(1), IL1A(1), IL1R1(1), JUND(2), MYOG(1), NR4A3(3), WDR1(2) 2930948 17 17 17 10 5 7 1 0 4 0 0.98 1.00 1.00 596 HSA00061_FATTY_ACID_BIOSYNTHESIS Genes involved in fatty acid biosynthesis ACACA, ACACB, FASN, MCAT, OLAH, OXSM 6 ACACA(2), ACACB(9), FASN(2), MCAT(1), OLAH(2), OXSM(1) 4267550 17 15 17 13 8 5 1 1 2 0 0.98 1.00 1.00 597 HSA00930_CAPROLACTAM_DEGRADATION Genes involved in caprolactam degradation AKR1A1, ASAHL, ECHS1, EHHADH, HADH, HADHA, HSD17B10, HSD17B4, NTAN1, SIRT1, SIRT2, SIRT5, SIRT7, VNN2, VNN3 13 ECHS1(1), EHHADH(1), HADH(1), HADHA(2), HSD17B4(1), SIRT1(1), SIRT2(2), SIRT7(2), VNN2(5) 3169468 16 15 16 10 2 5 1 4 4 0 0.98 1.00 1.00 598 KERATAN_SULFATE_BIOSYNTHESIS B3GNT1, B4GALT1, B4GALT2, B4GALT3, B4GALT5, FUT8, SIAT4A, SIAT4B, SIAT6, ST3GAL1, ST3GAL2, ST3GAL3, ST3GAL4 10 B4GALT1(1), B4GALT3(3), B4GALT5(2), FUT8(2), ST3GAL1(4), ST3GAL4(2) 2109834 14 14 14 10 4 7 1 2 0 0 0.97 1.00 1.00 599 HSA00601_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTOSERIES Genes involved in glycosphingolipid biosynthesis - lactoseries ABO, B3GALT1, B3GALT2, B3GALT5, B3GNT5, FUT1, FUT2, FUT3, ST3GAL3, ST3GAL4 10 ABO(1), B3GALT1(3), B3GALT2(3), FUT2(1), FUT3(3), ST3GAL4(2) 1921688 13 13 13 6 5 4 2 2 0 0 0.81 1.00 1.00 600 HSA00072_SYNTHESIS_AND_DEGRADATION_OF_KETONE_BODIES Genes involved in synthesis and degradation of ketone bodies ACAT1, ACAT2, BDH1, BDH2, HMGCL, HMGCS1, HMGCS2, OXCT1, OXCT2 9 ACAT1(2), BDH1(4), HMGCL(1), HMGCS1(1), HMGCS2(3), OXCT1(3) 1927206 14 12 14 7 6 5 0 3 0 0 0.91 1.00 1.00 601 ALKALOID_BIOSYNTHESIS_II ABP1, AOC2, AOC3, CES1, ESD 5 ABP1(5), AOC2(2), AOC3(3), CES1(2) 1620868 12 11 12 7 0 4 1 7 0 0 0.93 1.00 1.00 602 MITRPATHWAY The MyoD/MEF2 transcription factors induce muscle cell differentiation and are repressed by the transcriptional repressor MITR. CAMK1, CAMK1G, HDAC9, MEF2A, MEF2B, MEF2C, MEF2D, MYOD1, YWHAH 7 CAMK1G(3), MEF2A(3), MEF2C(4), MYOD1(1) 1343722 11 11 11 8 5 4 1 1 0 0 0.97 1.00 1.00 603 TUBBYPATHWAY Tubby is activated by phospholipase C activity and hydrolysis of PIP2, after which it enters the nucleus and regulates transcription. CHRM1, GNAQ, GNB1, GNGT1, HTR2C, PLCB1, TUB 7 GNB1(1), HTR2C(4), PLCB1(8) 1910296 13 11 13 7 4 6 1 2 0 0 0.91 1.00 1.00 604 FOLATE_BIOSYNTHESIS ALPI, ALPL, ALPP, ALPP, ALPPL2, ALPPL2, DHFR, FPGS, GCH1, GGH, SPR 9 ALPL(3), ALPP(3), ALPPL2(1), FPGS(2), GCH1(1), GGH(2) 1778932 12 10 12 8 5 5 0 2 0 0 0.91 1.00 1.00 605 TERTPATHWAY hTERC, the RNA subunit of telomerase, and hTERT, the catalytic protein subunit, are required for telomerase activity and are overexpressed in many cancers. HDAC1, MAX, MYC, SP1, SP3, TP53, WT1, ZNF42 6 HDAC1(2), MYC(1), SP1(2), SP3(1), WT1(4) 1663232 10 10 10 5 1 3 2 4 0 0 0.90 1.00 1.00 606 VOBESITYPATHWAY The adipose tissue of obese individuals overexpresses a key glucocorticoid-metabolizing enzyme, activating inactive circulating corticosteroids and inducing insulin resistance. APM1, HSD11B1, LPL, NR3C1, PPARG, RETN, RXRA, TNF 7 HSD11B1(3), LPL(3), NR3C1(1), RXRA(2), TNF(1) 1551626 10 10 10 5 3 5 0 2 0 0 0.82 1.00 1.00 607 MALATEXPATHWAY The tricarboxylate transfer pathway shuttles acetyl groups of acetyl-CoA between mitochondria and the cytoplasm. ACLY, CS, MDH1, ME1, PC, PDHA1, SLC25A1, SLC25A11 8 MDH1(1), ME1(2), PC(2), PDHA1(3), SLC25A11(1) 2462452 9 9 9 10 3 2 0 2 2 0 1.00 1.00 1.00 608 INOSITOL_METABOLISM ALDH6A1, ALDOA, ALDOB, ALDOC, TPI1 5 ALDH6A1(1), ALDOA(1), ALDOB(2), TPI1(3) 1041834 7 7 7 4 2 3 0 2 0 0 0.87 1.00 1.00 609 RABPATHWAY Rab family GTPases regulate vesicle transport, endocytosis and exocytosis, and vesicle docking via interactions with the rabphilins. ACTA1, MEL, RAB11A, RAB1A, RAB2, RAB27A, RAB3A, RAB4A, RAB5A, RAB6A, RAB7, RAB9A 9 ACTA1(3), RAB11A(1), RAB4A(3) 1142226 7 7 7 12 1 5 0 0 1 0 1.00 1.00 1.00 610 SYNTHESIS_AND_DEGRADATION_OF_KETONE_BODIES ACAT1, ACAT2, BDH, HMGCL, OXCT1 4 ACAT1(2), HMGCL(1), OXCT1(3) 901926 6 6 6 3 0 3 0 3 0 0 0.89 1.00 1.00 611 BOTULINPATHWAY Blockade of Neurotransmitter Relase by Botulinum Toxin CHRM1, CHRNA1, SNAP25, STX1A, VAMP2 5 CHRNA1(4), SNAP25(1) 869530 5 5 5 3 3 1 0 1 0 0 0.83 1.00 1.00 612 HSA00460_CYANOAMINO_ACID_METABOLISM Genes involved in cyanoamino acid metabolism ASRGL1, GBA, GBA3, GGT1, GGTL3, GGTL4, SHMT1, SHMT2 5 GBA(4), GGT1(1) 1264156 5 5 5 5 1 2 1 1 0 0 0.97 1.00 1.00 613 ACETAMINOPHENPATHWAY Acetaminophen selectively inhibits Cox-3, which is localized to the brain, and yields the toxic metabolite NAPQI when processed by CAR in the liver. CYP1A2, CYP2E1, CYP3A, NR1I3, PTGS1, PTGS2 5 CYP1A2(1), NR1I3(1), PTGS1(2) 1417058 4 3 4 4 1 1 0 2 0 0 0.97 1.00 1.00 614 HSA00130_UBIQUINONE_BIOSYNTHESIS Genes involved in ubiquinone biosynthesis COQ2, COQ3, COQ5, COQ6, COQ7, ND1, ND2, ND3, ND4, ND4L, ND5, ND6, NDUFA12, NDUFA13, NDUFB11 8 COQ7(1), NDUFA13(2) 1072984 3 3 3 4 1 0 0 2 0 0 0.99 1.00 1.00 615 CYANOAMINO_ACID_METABOLISM ATP6V0C, SHMT1, GBA3, GGT1, SHMT1, SHMT2 4 GGT1(1) 881456 1 1 1 4 0 1 0 0 0 0 1.00 1.00 1.00 616 HSA00785_LIPOIC_ACID_METABOLISM Genes involved in lipoic acid metabolism LIAS, LIPT1, LOC387787 2 407442 0 0 0 0 0 0 0 0 0 0 1.00 1.00 1.00