Warning: No display specified.  You will not be able to display graphics on the screen.
fh_MutSigPreprocess
libdir = /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigPreprocess.90.3705/
-i
KIRC
-b
hg19
-t
/xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_hg19.txt
-c
/xchip/cga1/annotation/db/tracks/hg19/c65e
-bd
/xchip/cga1/annotation/db/ucsc/hg19
-cat
4
-maf1
/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis5276919590263357983.att_maf1.input.tsv
-maf3
/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis8040062206184984819.att_maf3.input.tsv
-maflabel1
Broad
-maflabel2
WashU
-maflabel3
Baylor
-wig1
/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis4698690415801847701.att_wig1.input.tsv
-p
/xchip/cga1/reference/mutsig_params/MutSig2.0.params.txt

               perform_mutsig2_analysis: 1
     use_sample_specific_mutation_rates: 1
        analyze_silent_nonsilent_ratios: 1
                 sig_calculation_method: 'projection'
                           print_report: 0
                  clip_tumor_from_names: 1
                                  build: 'hg19'
                              build_dir: '/xchip/cga1/annotation/db/ucsc/hg19'
             keep_barebones_fields_only: 0
    consolidate_adjacent_muts_threshold: 1
             remove_noncoding_mutations: 1
                    enforce_target_list: 0
                            target_list: [1x69 char]
                     mutation_blacklist: []
                     mutation_whitelist: []

Loading MAFs for Broad
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3308-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3311-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3316-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3317-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3319-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3320-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3322-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3323-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3324-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3326-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3346-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3347-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3349-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3351-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3357-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3358-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3362-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3363-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3365-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3367-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3370-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3372-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3373-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3376-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3378-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3380-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3382-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3383-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3385-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-A3-3387-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-AK-3429-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-AK-3430-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-AK-3436-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-AK-3444-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-AK-3451-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-AK-3455-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-AK-3456-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-AK-3458-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-AS-3778-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4700-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4706-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4710-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4712-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4810-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4811-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4815-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4816-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4818-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4823-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4827-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4842-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4852-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-4945-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5075-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5077-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5080-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5081-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5085-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5088-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5092-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5094-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5095-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5096-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5097-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5099-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5100-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5102-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5104-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5106-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5107-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5108-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5109-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5110-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5113-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5115-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5116-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5119-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5120-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5121-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5399-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5400-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5402-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5691-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5692-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5693-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5694-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5695-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5696-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5697-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5698-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5699-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5701-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5702-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5703-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5705-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5706-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5707-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5709-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5710-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5711-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5713-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B0-5812-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B2-3924-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B2-4098-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B2-4099-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B2-4101-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B2-4102-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B2-5633-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B2-5635-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B2-5641-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B4-5377-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-4143-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-4146-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-4148-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-4151-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-4153-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-4154-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-4620-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-4621-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-4622-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-5158-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-5159-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-5163-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-5164-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-5165-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-5545-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-5546-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-5549-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-5551-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-B8-5552-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4161-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4162-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4163-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4164-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4167-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4770-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4782-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4801-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4960-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4961-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4962-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4963-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4964-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4967-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4968-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4970-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4971-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4972-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4973-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4974-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4975-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4976-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4977-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4981-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4982-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4983-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4985-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4986-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4987-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4988-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4989-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4991-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4992-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4993-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4995-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4998-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-4999-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5000-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5001-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5004-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5006-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5007-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5008-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5009-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5010-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5168-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5169-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5170-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5173-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5174-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5175-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5176-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5177-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5178-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5180-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5182-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5183-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5184-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5185-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5186-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5187-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5189-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5190-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5191-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5192-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5194-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5195-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5196-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5198-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5199-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5200-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5201-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5202-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4634-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4636-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4637-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4638-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4639-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4640-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4641-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4643-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4644-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4882-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4897-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4899-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4901-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4902-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4903-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4904-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4905-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4907-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4908-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4912-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4913-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4916-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4918-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4920-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-4923-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5671-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5672-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5675-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5676-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5677-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5678-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5679-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5680-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5681-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5682-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5683-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5684-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-5686-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-6027-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-6028-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-6030-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-6031-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-6032-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CJ-6033-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CW-5580-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CW-5581-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CW-5583-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CW-5584-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CW-5585-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CW-5588-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CW-5589-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CW-5591-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CW-6087-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CW-6090-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CW-6093-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-4853-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-4856-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-4859-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-4863-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-4866-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5451-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5452-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5453-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5454-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5456-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5457-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5458-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5459-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5460-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5461-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5462-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5463-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5464-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5465-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5466-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5467-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5468-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5469-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5470-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5982-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5984-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5985-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5986-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5987-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5988-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-CZ-5989-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-EU-5904-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-EU-5905-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-EU-5906-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-EU-5907-01.maf.txt
Loading MAFs for Baylor
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-A3-3347-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-A3-3349-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-A3-3362-01.maf.txt
KIRC-AK-3426 has mutation data but no coverage data: therefore is being IGNORED
KIRC-AK-3428 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-AK-3429-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-AK-3430-01.maf.txt
KIRC-AK-3431 has mutation data but no coverage data: therefore is being IGNORED
KIRC-AK-3434 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-AK-3436-01.maf.txt
KIRC-AK-3445 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-AK-3451-01.maf.txt
KIRC-AK-3454 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-AK-3456-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-AK-3458-01.maf.txt
KIRC-AK-3460 has mutation data but no coverage data: therefore is being IGNORED
KIRC-AK-3461 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4690 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4691 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4693 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4694 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4696 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4697 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4698 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4703 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-4706-01.maf.txt
KIRC-B0-4707 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-4710-01.maf.txt
KIRC-B0-4713 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4714 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4718 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-4810-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-4811-01.maf.txt
KIRC-B0-4813 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4814 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-4815-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-4816-01.maf.txt
KIRC-B0-4817 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-4818-01.maf.txt
KIRC-B0-4819 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4821 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4822 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4824 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4828 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4833 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4836 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4837 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4838 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4839 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4841 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4843 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4844 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4845 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4846 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4847 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4848 has mutation data but no coverage data: therefore is being IGNORED
KIRC-B0-4849 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-4852-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-5080-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-5399-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-5400-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B0-5402-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B2-3924-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B2-4098-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B2-4099-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B2-4101-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B4-5377-01.maf.txt
KIRC-B4-5378 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B8-4143-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B8-4148-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B8-4151-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B8-4154-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B8-4620-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B8-4621-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-B8-4622-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-BP-4161-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-BP-4162-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-BP-4163-01.maf.txt
KIRC-BP-4165 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4166 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4169 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4170 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4173 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4176 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4325 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4326 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4329 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4330 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4332 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4337 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4338 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4340 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4341 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4343 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4345 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4346 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4347 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4349 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4351 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4352 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4756 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4758 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4759 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4761 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4762 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4763 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4765 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4768 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-BP-4770-01.maf.txt
KIRC-BP-4774 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4775 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4777 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4781 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4784 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4787 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4789 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4790 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4797 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4798 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4799 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4803 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4804 has mutation data but no coverage data: therefore is being IGNORED
KIRC-BP-4807 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CJ-4634-01.maf.txt
KIRC-CJ-4635 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CJ-4637-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CJ-4638-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CJ-4639-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CJ-4640-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CJ-4641-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CJ-4643-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CJ-4644-01.maf.txt
KIRC-CJ-4868 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4870 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4871 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4872 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4873 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4874 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4875 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4876 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4878 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4881 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4884 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4885 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4886 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4887 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4889 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4890 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4893 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CJ-4895 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CZ-4854 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CZ-4857 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CZ-4858 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CZ-4860 has mutation data but no coverage data: therefore is being IGNORED
KIRC-CZ-4862 has mutation data but no coverage data: therefore is being IGNORED
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-4863-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-4866-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5451-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5452-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5453-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5454-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5456-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5457-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5458-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5459-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5460-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5461-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5462-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5463-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5464-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5465-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5466-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5467-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5468-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5469-01.maf.txt
Loaded /xchip/gdac_data/normalized/diced/kirc/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_KIRC.SOLiD_DNA.Level_2.1.0.0/TCGA-CZ-5470-01.maf.txt
Concatenating structs...

                   Annotation_Transcript: [293]
                                BAM_file: [359]
      CCLE_ONCOMAP_overlapping_mutations: [293]
    CCLE_ONCOMAP_total_mutations_in_gene: [293]
                       CGC_Mutation_Type: [293]
                      CGC_Other_Diseases: [293]
               CGC_Translocation_Partner: [293]
                CGC_Tumor_Types_Germline: [293]
                 CGC_Tumor_Types_Somatic: [293]
                     COSMIC_fusion_genes: [293]
            COSMIC_overlapping_mutations: [293]
            COSMIC_tissue_types_affected: [293]
        COSMIC_total_alterations_in_gene: [293]
                                  Center: [359]
                              Chromosome: [359]
                            Codon_Change: [293]
                     DNARepairGenes_Role: [293]
                             Description: [293]
                                DrugBank: [293]
                            End_position: [359]
                          Entrez_Gene_Id: [359]
        FamilialCancerDatabase_Syndromes: [293]
                   GO_Biological_Process: [293]
                   GO_Cellular_Component: [293]
                   GO_Molecular_Function: [293]
                           Genome_Change: [293]
                             Hugo_Symbol: [359]
                MUTSIG_Published_Results: [293]
                  Match_Norm_Seq_Allele1: [359]
                  Match_Norm_Seq_Allele2: [359]
           Match_Norm_Validation_Allele1: [359]
           Match_Norm_Validation_Allele2: [359]
             Matched_Norm_Sample_Barcode: [359]
                         Mutation_Status: [359]
                              NCBI_Build: [359]
                             OREGANNO_ID: [293]
                         OREGANNO_Values: [293]
                       Other_Transcripts: [293]
                          Protein_Change: [293]
                        Reference_Allele: [359]
                          Refseq_mRNA_Id: [293]
                          Refseq_prot_Id: [293]
                                   Score: [359]
                         Sequence_Source: [359]
                               Sequencer: [359]
                        Sequencing_Phase: [359]
                          Start_position: [359]
                                  Strand: [359]
                        SwissProt_acc_Id: [293]
                      SwissProt_entry_Id: [293]
           TCGAscape_Amplification_Peaks: [293]
                TCGAscape_Deletion_Peaks: [293]
                         Transcript_Exon: [293]
                     Transcript_Position: [293]
                       Transcript_Strand: [293]
                    Tumor_Sample_Barcode: [359]
                       Tumor_Seq_Allele1: [359]
                       Tumor_Seq_Allele2: [359]
                Tumor_Validation_Allele1: [359]
                Tumor_Validation_Allele2: [359]
          Tumorscape_Amplification_Peaks: [293]
               Tumorscape_Deletion_Peaks: [293]
                           UniProt_AApos: [293]
               UniProt_Experimental_Info: [293]
              UniProt_Natural_Variations: [293]
                          UniProt_Region: [293]
                            UniProt_Site: [293]
                       Validation_Method: [359]
                       Validation_Status: [359]
                  Variant_Classification: [359]
                            Variant_Type: [359]
                     Verification_Status: [359]
                             cDNA_Change: [293]
                                 dataset: [359]
                                dbSNP_RS: [359]
                        dbSNP_Val_Status: [359]
                                  filter: [293]
                              gc_content: [293]
                                 patient: [359]
                             ref_context: [293]
                             t_alt_count: [293]
                             t_ref_count: [293]
                   validation_alt_allele: [293]
                       validation_method: [293]
                       validation_status: [293]
                 validation_tumor_sample: [293]
                               ----TOTAL: [27442]
Calling preprocess_mutations...
WARNING: unknown chromosome(s):
    'M'

Validation_Status:

             : [95839]
      Unknown: [3819]
    ----TOTAL: [99658]
Omitting the following 232 mutations on nonstandard chromosomes:

            M: [232]
    ----TOTAL: [232]
Removing the following non-coding mutations (based on "type" field):
        3'UTR: [3554]
      5'Flank: [1572]
        5'UTR: [1078]
          IGR: [24230]
       Intron: [39066]
          RNA: [1018]
    ----TOTAL: [70518]
Not enforcing any target list.
Collapsing adjacent mutations:
convert_chr: assuming human for chrX/chrY

    2 SNPs to one Complex_substitution (guessing "Missense"): [18]
                     2 SNPs to one DNP (guessing "Missense"): [190]
                                    2 SNPs/Indels to one SNP: [126]
                                 2 redundant SNPs to one SNP: [2139]
                     3 SNPs to one DNP (guessing "Missense"): [17]
                                    3 SNPs/Indels to one SNP: [9]
                                 3 redundant SNPs to one SNP: [132]
    4 SNPs to one Complex_substitution (guessing "Missense"): [3]
                     4 SNPs to one DNP (guessing "Missense"): [19]
                     6 SNPs to one DNP (guessing "Missense"): [3]
                                                   ----TOTAL: [2656]

Genes affected:
              AAGAB: [1]
              AARS2: [1]
               AASS: [1]
              ABCA1: [1]
              ABCA5: [1]
              ABCA6: [1]
              ABCA7: [1]
              ABCA8: [1]
              ABCB1: [1]
             ABCB11: [1]
              ABCB6: [1]
             ABCC12: [1]
              ABCC9: [1]
              ABCD4: [1]
              ABCG4: [1]
             ABHD12: [1]
               ABRA: [1]
              ACACA: [1]
              ACADS: [1]
              ACOT9: [1]
             ACSBG2: [1]
              ACSF2: [1]
              ACSL1: [1]
              ACSM5: [1]
              ACTL8: [1]
              ACTN1: [1]
              ACTR2: [1]
             ACTRT1: [1]
             ACVR1C: [1]
             ACVR2A: [1]
             ADAM21: [1]
             ADAM23: [1]
             ADAM28: [1]
             ADAM33: [1]
           ADAMTS12: [1]
           ADAMTS13: [1]
           ADAMTS15: [1]
           ADAMTS16: [1]
           ADAMTS20: [1]
            ADAMTS7: [1]
            ADAMTS8: [1]
               ADAR: [1]
             ADARB2: [1]
              ADAT3: [1]
              ADCK1: [1]
              ADCK2: [1]
              ADCY8: [1]
              ADCY9: [1]
               ADH5: [1]
            ADORA2A: [1]
             ADORA3: [1]
            AFAP1L2: [1]
               AFF4: [1]
              AGMAT: [1]
               AGRN: [1]
              AGTR1: [1]
             AHCYL2: [1]
              AHNAK: [1]
                AHR: [1]
              AIFM1: [1]
              AKAP1: [1]
              AKAP6: [1]
              AKAP9: [1]
               AKT1: [1]
              ALCAM: [1]
            ALDH1A1: [1]
              ALDH2: [1]
             ALOXE3: [1]
              AMHR2: [1]
              AMPD1: [1]
               AMZ2: [1]
             ANGPT1: [1]
             ANKFN1: [1]
             ANKLE2: [1]
             ANKRD1: [1]
            ANKRD17: [1]
            ANKRD26: [1]
            ANKRD32: [1]
           ANKRD34B: [1]
            ANKRD50: [1]
               ANO2: [1]
              AP3B2: [1]
              AP3S1: [1]
              AP4M1: [1]
                APC: [1]
              APLP1: [1]
           APOBEC3B: [1]
              APPL2: [1]
              AQPEP: [1]
               ARF1: [1]
            ARFGAP2: [1]
            ARFGEF1: [1]
            ARFGEF2: [1]
             ARFIP2: [1]
               ARG1: [1]
               ARG2: [1]
           ARHGAP17: [1]
           ARHGAP20: [1]
           ARHGAP21: [1]
           ARHGAP26: [1]
            ARHGEF1: [1]
           ARHGEF17: [1]
            ARHGEF3: [1]
             ARID1B: [1]
              ARID2: [1]
             ARMC10: [1]
              ARMC3: [1]
              ARMC4: [1]
              ARMC6: [1]
             ARMCX2: [1]
              ARNT2: [1]
              ARPC2: [1]
             ARPP19: [1]
               ARSI: [1]
               ART3: [1]
              ASB15: [1]
              ASH1L: [1]
              ASH2L: [1]
               ASNS: [1]
             ASNSD1: [1]
               ASS1: [1]
               ATE1: [1]
              ATF6B: [1]
            ATF7IP2: [1]
              ATG2B: [1]
              ATHL1: [1]
             ATP11A: [1]
             ATP12A: [1]
            ATP13A2: [1]
            ATP13A5: [1]
             ATP1A1: [1]
             ATP1A2: [1]
             ATP2A1: [1]
             ATP5A1: [1]
             ATP5G2: [1]
           ATP6V0A1: [1]
             ATP8A1: [1]
             ATP8A2: [1]
             ATP8B3: [1]
              ATP9A: [1]
             ATRNL1: [1]
              AUTS2: [1]
              AXIN1: [1]
                B2M: [1]
             B3GNT6: [1]
             B3GNT7: [1]
           B4GALNT4: [1]
            B4GALT5: [1]
             BAHCC1: [1]
              BARD1: [1]
              BAZ1B: [1]
              BBOX1: [1]
              BCAR1: [1]
              BCAS2: [1]
              BCAS3: [1]
             BCL11A: [1]
             BCL2A1: [1]
              BCL7A: [1]
               BCL9: [1]
               BCO2: [1]
               BEAN: [1]
              BFSP2: [1]
             BHLHB9: [1]
               BIN2: [1]
              BIRC2: [1]
                BLM: [1]
               BMP7: [1]
              BMPR2: [1]
               BMS1: [1]
              BRCA2: [1]
               BRD1: [1]
              BRIP1: [1]
              BRWD1: [1]
              BTAF1: [1]
             BTBD12: [1]
               BTG4: [1]
              BTNL8: [1]
               BUB3: [1]
             BZRAP1: [1]
               BZW2: [1]
          C10orf118: [1]
           C10orf18: [1]
           C10orf47: [1]
           C10orf76: [1]
           C11orf57: [1]
           C11orf93: [1]
           C12orf10: [1]
           C12orf51: [1]
           C13orf15: [1]
           C13orf18: [1]
          C14orf106: [1]
          C14orf109: [1]
         C14orf166B: [1]
           C14orf39: [1]
            C14orf4: [1]
           C16orf55: [1]
           C16orf73: [1]
          C17orf101: [1]
           C17orf53: [1]
           C17orf71: [1]
           C17orf80: [1]
           C19orf38: [1]
           C19orf51: [1]
           C19orf61: [1]
               C1QC: [1]
                C1S: [1]
           C1orf101: [1]
            C1orf14: [1]
           C1orf168: [1]
            C1orf25: [1]
            C1orf91: [1]
          C20orf118: [1]
          C20orf191: [1]
           C20orf26: [1]
           C20orf94: [1]
           C21orf56: [1]
           C22orf30: [1]
           C22orf41: [1]
           C2orf27A: [1]
            C2orf29: [1]
             C2orf3: [1]
            C2orf39: [1]
            C2orf61: [1]
            C2orf71: [1]
            C2orf83: [1]
            C2orf85: [1]
            C2orf86: [1]
            C2orf88: [1]
            C2orf89: [1]
            C3orf45: [1]
            C3orf63: [1]
            C3orf67: [1]
            C3orf70: [1]
            C4orf29: [1]
            C5orf13: [1]
            C5orf23: [1]
             C5orf4: [1]
            C5orf44: [1]
            C5orf47: [1]
           C6orf118: [1]
            C6orf62: [1]
            C6orf70: [1]
                 C7: [1]
            C7orf10: [1]
            C7orf46: [1]
            C7orf58: [1]
            C7orf66: [1]
            C8orf37: [1]
            C8orf47: [1]
            C8orf79: [1]
            C9orf11: [1]
            C9orf41: [1]
            C9orf64: [1]
            C9orf93: [1]
               CA10: [1]
              CABC1: [1]
            CACNA1D: [1]
            CACNA1I: [1]
                CAD: [1]
              CADPS: [1]
               CALR: [1]
             CAMK2G: [1]
          CAMSAP1L1: [1]
             CAMTA2: [1]
              CAND1: [1]
            CAPRIN2: [1]
              CAPSL: [1]
             CAPZA2: [1]
             CARD10: [1]
             CARD11: [1]
              CASC5: [1]
            CASKIN2: [1]
              CASP1: [1]
              CASP7: [1]
           CASP8AP2: [1]
               CAST: [1]
                CAT: [1]
               CAV3: [1]
               CBLB: [1]
             CCDC11: [1]
            CCDC120: [1]
            CCDC129: [1]
             CCDC13: [1]
            CCDC132: [1]
            CCDC136: [1]
            CCDC149: [1]
            CCDC158: [1]
             CCDC27: [1]
             CCDC42: [1]
             CCDC46: [1]
             CCDC47: [1]
             CCDC51: [1]
            CCDC74A: [1]
             CCDC81: [1]
             CCDC89: [1]
             CCDC99: [1]
              CCNB3: [1]
              CCND2: [1]
              CCNE1: [1]
              CCNG2: [1]
               CCNH: [1]
               CCNJ: [1]
               CCNY: [1]
              CCPG1: [1]
             CCRN4L: [1]
              CD207: [1]
              CD2AP: [1]
            CD300LB: [1]
            CD300LG: [1]
               CD3E: [1]
               CD3G: [1]
               CD55: [1]
                CD6: [1]
              CDAN1: [1]
              CDC20: [1]
             CDC25A: [1]
              CDC27: [1]
              CDC42: [1]
              CDCA2: [1]
              CDH18: [1]
               CDH5: [1]
               CDH8: [1]
              CDHR1: [1]
              CDK12: [1]
               CDK3: [1]
             CDKN2C: [1]
               CDON: [1]
              CECR2: [1]
              CELF3: [1]
              CELF5: [1]
              CELF6: [1]
              CENPB: [1]
             CENPC1: [1]
             CEP110: [1]
             CEP120: [1]
             CEP152: [1]
             CEP164: [1]
             CEP350: [1]
              CEP68: [1]
              CEP76: [1]
              CEP97: [1]
             CERCAM: [1]
               CES2: [1]
                CFH: [1]
              CFHR2: [1]
              CH25H: [1]
              CHADL: [1]
             CHAF1A: [1]
               CHD2: [1]
               CHD6: [1]
               CHL1: [1]
             CHMP2B: [1]
              CHRM5: [1]
             CHRNA2: [1]
              CHST1: [1]
              CHST9: [1]
               CIB4: [1]
             CKAP2L: [1]
             CLASP1: [1]
             CLDN10: [1]
             CLDN16: [1]
             CLEC4C: [1]
             CLEC9A: [1]
              CLIP1: [1]
               CLK1: [1]
               CLK4: [1]
               CLMN: [1]
             CLNS1A: [1]
              CLOCK: [1]
              CLRN1: [1]
              CLSPN: [1]
             CLSTN2: [1]
             CLSTN3: [1]
              CLYBL: [1]
             CMKLR1: [1]
              CNGA2: [1]
               CNN3: [1]
              CNOT6: [1]
              CNPY4: [1]
               CNST: [1]
            CNTNAP2: [1]
            CNTNAP4: [1]
            CNTNAP5: [1]
               COBL: [1]
               COG4: [1]
            COL11A1: [1]
            COL12A1: [1]
            COL13A1: [1]
            COL21A1: [1]
            COL22A1: [1]
            COL24A1: [1]
            COL29A1: [1]
             COL4A6: [1]
             COL6A2: [1]
             COL9A2: [1]
               COMP: [1]
             CORO1A: [1]
             CORO2B: [1]
              COX19: [1]
             COX7A2: [1]
             CPAMD8: [1]
              CPNE1: [1]
              CPSF7: [1]
                CR1: [1]
            CRAMP1L: [1]
               CRB1: [1]
             CREBBP: [1]
             CRISP2: [1]
             CRYBB2: [1]
             CSF2RA: [1]
              CSMD3: [1]
           CSNK1A1L: [1]
              CSTF3: [1]
             CTAGE5: [1]
             CTDSP2: [1]
             CTNNA1: [1]
             CTNNA2: [1]
             CTNND2: [1]
               CTSH: [1]
               CTSK: [1]
              CTSL1: [1]
               CTSW: [1]
            CTTNBP2: [1]
              CTXN2: [1]
               CUBN: [1]
             CUEDC2: [1]
               CUL1: [1]
               CUL9: [1]
               CUX1: [1]
              CWC25: [1]
              CXCR6: [1]
             CYB5R1: [1]
             CYFIP1: [1]
              CYLC1: [1]
            CYP26B1: [1]
             CYP2J2: [1]
            CYP4A11: [1]
             CYP4B1: [1]
             CYP4F2: [1]
              DAAM1: [1]
               DAB2: [1]
              DAGLA: [1]
                DAO: [1]
           DCAF12L1: [1]
             DCAF17: [1]
              DCAF5: [1]
              DCAF6: [1]
            DCAF8L2: [1]
              DCHS2: [1]
              DCLK1: [1]
              DCST1: [1]
              DCST2: [1]
               DDA1: [1]
               DDB1: [1]
                DDC: [1]
              DDX24: [1]
              DDX3X: [1]
              DDX50: [1]
               DDX6: [1]
               DEDD: [1]
            DENND2C: [1]
            DENND4B: [1]
            DENND5A: [1]
            DENND5B: [1]
               DGKK: [1]
               DGKZ: [1]
               DHDH: [1]
              DHX15: [1]
              DHX30: [1]
              DHX35: [1]
              DIP2B: [1]
               DIS3: [1]
              DISP1: [1]
              DKKL1: [1]
               DLG2: [1]
               DLK2: [1]
               DLX3: [1]
               DLX6: [1]
               DMP1: [1]
              DMRT2: [1]
              DMXL1: [1]
             DNAH14: [1]
             DNAH17: [1]
              DNAH2: [1]
            DNAJC11: [1]
            DNAJC17: [1]
             DNAJC3: [1]
               DNER: [1]
              DNM1L: [1]
              DNPEP: [1]
             DOCK10: [1]
              DOCK4: [1]
              DOCK7: [1]
              DOCK8: [1]
             DOPEY1: [1]
              DPEP2: [1]
               DPP4: [1]
                DPT: [1]
            DPY19L1: [1]
            DPY19L4: [1]
               DPYD: [1]
             DPYSL3: [1]
               DRD1: [1]
               DRD3: [1]
              DSCAM: [1]
            DSCAML1: [1]
              DSCR6: [1]
               DSG2: [1]
                DSP: [1]
              DTHD1: [1]
             DUOXA1: [1]
              DUSP5: [1]
            DYNC2H1: [1]
              DYRK2: [1]
               EBPL: [1]
                ECD: [1]
             ECHDC3: [1]
               ECT2: [1]
              EDIL3: [1]
               EDN1: [1]
              EEF1D: [1]
             EEFSEC: [1]
             EFCAB5: [1]
             EFEMP2: [1]
              EFHC2: [1]
             EFTUD2: [1]
                EGF: [1]
              EGFL6: [1]
              EGFL7: [1]
             EGFLAM: [1]
            EHBP1L1: [1]
             EHHADH: [1]
              EHMT2: [1]
              EIF2A: [1]
            EIF2AK2: [1]
             EIF2B1: [1]
             EIF2C2: [1]
             EIF4G2: [1]
               ELK4: [1]
               ELL2: [1]
              ELMO3: [1]
              ELTD1: [1]
               EME1: [1]
            EMILIN2: [1]
               EMR3: [1]
               ENC1: [1]
              ENPP3: [1]
              ENPP5: [1]
             ENTHD1: [1]
              EOMES: [1]
              EPAS1: [1]
            EPB41L3: [1]
              EPHA8: [1]
             EPS8L1: [1]
              ERBB2: [1]
              ERCC4: [1]
              ERCC5: [1]
                ERF: [1]
              ERP27: [1]
           ERVFRDE1: [1]
              ESCO1: [1]
              ESPL1: [1]
              ESRP2: [1]
               ETV1: [1]
               ETV6: [1]
               EVI5: [1]
              EWSR1: [1]
             EXOC6B: [1]
            EXOSC10: [1]
                EYS: [1]
                 F2: [1]
                 F8: [1]
                FAH: [1]
            FAM118A: [1]
            FAM124A: [1]
             FAM13A: [1]
            FAM151A: [1]
           FAM160A1: [1]
           FAM160B2: [1]
            FAM166A: [1]
            FAM169A: [1]
            FAM175B: [1]
            FAM179B: [1]
            FAM180A: [1]
            FAM183A: [1]
             FAM18A: [1]
            FAM194A: [1]
             FAM21A: [1]
             FAM35A: [1]
              FAM3A: [1]
             FAM47B: [1]
             FAM49A: [1]
             FAM54B: [1]
              FAM5C: [1]
             FAM70B: [1]
             FAM71B: [1]
             FAM83H: [1]
              FAM9A: [1]
              FANCB: [1]
            FASTKD3: [1]
               FAT1: [1]
               FAT3: [1]
               FAT4: [1]
              FBLN2: [1]
               FBN2: [1]
               FBRS: [1]
             FBXO18: [1]
             FBXO34: [1]
             FBXO39: [1]
             FBXO43: [1]
              FBXW7: [1]
              FBXW8: [1]
               FCAR: [1]
             FER1L6: [1]
              FGFR2: [1]
              FGFR4: [1]
              FHOD1: [1]
               FIG4: [1]
               FIGN: [1]
              FKBPL: [1]
               FLG2: [1]
               FLNC: [1]
            FLYWCH1: [1]
               FMN2: [1]
              FMNL1: [1]
             FMR1NB: [1]
             FNBP1L: [1]
              FNBP4: [1]
              FNIP1: [1]
              FOXR1: [1]
            FOXRED1: [1]
               FPR3: [1]
              FREM1: [1]
              FREM2: [1]
             FRMPD1: [1]
             FRMPD2: [1]
             FTSJD1: [1]
              FUBP1: [1]
                FUS: [1]
               FZD4: [1]
               FZD9: [1]
              G3BP1: [1]
               GAB2: [1]
               GAB4: [1]
             GABRA4: [1]
             GABRG2: [1]
            GAL3ST2: [1]
               GALE: [1]
              GALK1: [1]
            GALNT11: [1]
             GALNT2: [1]
               GAS2: [1]
              GATA4: [1]
            GATAD2B: [1]
                GBA: [1]
               GBF1: [1]
               GCC2: [1]
              GCFC1: [1]
               GCKR: [1]
              GCNT2: [1]
               GDF3: [1]
              GDPD1: [1]
             GEMIN4: [1]
             GEMIN6: [1]
              GFRA2: [1]
               GGCT: [1]
               GGT1: [1]
                GH2: [1]
               GHDC: [1]
             GIGYF1: [1]
              GJA10: [1]
               GLB1: [1]
               GLI3: [1]
             GLT8D1: [1]
              GNAT2: [1]
              GNL3L: [1]
               GNMT: [1]
             GOLGA4: [1]
              GOLM1: [1]
               GOT1: [1]
               GOT2: [1]
               GPC5: [1]
             GPCPD1: [1]
              GPM6A: [1]
              GPNMB: [1]
             GPR101: [1]
            GPR109A: [1]
             GPR111: [1]
             GPR112: [1]
              GPR15: [1]
              GPR27: [1]
              GPR52: [1]
              GPR83: [1]
               GPT2: [1]
               GPX4: [1]
              GRB10: [1]
               GRB7: [1]
              GREB1: [1]
              GRIA2: [1]
               GRM2: [1]
              GSK3A: [1]
              GSTA2: [1]
              GSTA3: [1]
              GTDC1: [1]
            GTF2A1L: [1]
           GTF2IRD1: [1]
             GTPBP2: [1]
            GUCY1A3: [1]
               GYS1: [1]
              HACE1: [1]
               HAP1: [1]
              HCLS1: [1]
               HCN1: [1]
             HCRTR2: [1]
              HDAC7: [1]
             HEATR1: [1]
             HEATR3: [1]
             HEATR6: [1]
            HEATR7A: [1]
           HEATR7B2: [1]
             HECTD1: [1]
             HEPHL1: [1]
               HES1: [1]
               HEXA: [1]
                HGS: [1]
               HHIP: [1]
             HHIPL2: [1]
              HIF1A: [1]
              HIP1R: [1]
             HIRIP3: [1]
          HIST1H2BJ: [1]
          HIST2H2AC: [1]
                HLF: [1]
              HMCN1: [1]
             HMGXB3: [1]
               HN1L: [1]
             HNRNPD: [1]
             HNRNPK: [1]
              HOOK3: [1]
             HOXA10: [1]
              HOXD3: [1]
              HPSE2: [1]
            HSP90B1: [1]
              HSPD1: [1]
              HSPG2: [1]
              HTR2B: [1]
              HUWE1: [1]
              HYAL4: [1]
               IARS: [1]
              IARS2: [1]
            IFI27L2: [1]
             IFITM2: [1]
             IFITM3: [1]
             IFNGR1: [1]
               IGF2: [1]
              IGF2R: [1]
             IGSF10: [1]
             IKBKAP: [1]
              IKZF3: [1]
             IL20RB: [1]
               IL25: [1]
             IL27RA: [1]
              IL2RB: [1]
               ILF2: [1]
              ILKAP: [1]
               IMMT: [1]
              IMPG2: [1]
              INADL: [1]
             INCENP: [1]
             INPP4A: [1]
              IPO13: [1]
                IPP: [1]
               IQCG: [1]
             IQGAP1: [1]
               IQUB: [1]
               ITCH: [1]
              ITGA6: [1]
              ITGA7: [1]
              ITGAL: [1]
              ITGB6: [1]
              ITGB7: [1]
                IVD: [1]
               IWS1: [1]
                IYD: [1]
               JAG1: [1]
            JAKMIP1: [1]
              JMJD6: [1]
      JMJD7-PLA2G4B: [1]
                JMY: [1]
              JSRP1: [1]
                JUN: [1]
               JUNB: [1]
               KAT5: [1]
              KCNA4: [1]
              KCNB2: [1]
              KCNH6: [1]
              KCNH7: [1]
              KCNQ5: [1]
              KCNV2: [1]
             KCTD12: [1]
             KCTD19: [1]
              KCTD2: [1]
              KDM6A: [1]
                KDR: [1]
              KEAP1: [1]
           KIAA0174: [1]
           KIAA0368: [1]
           KIAA0513: [1]
           KIAA0528: [1]
           KIAA0556: [1]
           KIAA0564: [1]
           KIAA0586: [1]
           KIAA0802: [1]
          KIAA0895L: [1]
           KIAA1012: [1]
           KIAA1109: [1]
           KIAA1210: [1]
           KIAA1279: [1]
           KIAA1310: [1]
           KIAA1486: [1]
           KIAA1731: [1]
           KIAA1797: [1]
           KIAA1984: [1]
           KIAA2022: [1]
             KIF13A: [1]
              KIF15: [1]
             KIF16B: [1]
              KIF17: [1]
              KIF19: [1]
              KIF1B: [1]
             KIF20B: [1]
             KIF21B: [1]
              KIF22: [1]
              KIF3B: [1]
              KIF5C: [1]
                KIN: [1]
              KITLG: [1]
                 KL: [1]
                KLB: [1]
               KLC3: [1]
             KLHDC5: [1]
             KLHL17: [1]
             KLHL31: [1]
             KLHL32: [1]
              KLHL5: [1]
              KLHL6: [1]
              KLK10: [1]
              KLK14: [1]
              KLRC1: [1]
              KNTC1: [1]
              KRT12: [1]
              KRT15: [1]
               KRT2: [1]
              KRT6B: [1]
              KRT85: [1]
           KRTAP1-3: [1]
          KRTAP10-6: [1]
          KRTAP13-1: [1]
          KRTAP15-1: [1]
          KRTAP20-2: [1]
           KRTAP4-4: [1]
            L3MBTL4: [1]
               LAD1: [1]
              LAIR1: [1]
              LAIR2: [1]
              LAMA1: [1]
              LAMA4: [1]
              LAMB4: [1]
            LAPTM4A: [1]
              LARP1: [1]
              LASS2: [1]
              LASS3: [1]
              LCN12: [1]
               LCP2: [1]
              LECT1: [1]
             LETMD1: [1]
               LIG4: [1]
             LILRA2: [1]
             LILRA3: [1]
             LILRA6: [1]
              LIN54: [1]
              LINS1: [1]
               LIPE: [1]
               LIPI: [1]
               LIPK: [1]
               LIPN: [1]
             LMBR1L: [1]
             LMBRD2: [1]
               LMLN: [1]
               LMNA: [1]
          LOC153328: [1]
              LONP1: [1]
             LONRF1: [1]
              LOXL4: [1]
             LPCAT3: [1]
             LPCAT4: [1]
              LPHN1: [1]
              LPHN2: [1]
              LPHN3: [1]
                LPP: [1]
              LRCH1: [1]
              LRFN2: [1]
              LRIG2: [1]
              LRP1B: [1]
               LRP5: [1]
             LRPPRC: [1]
              LRRC1: [1]
             LRRC18: [1]
             LRRC33: [1]
           LRRC37A3: [1]
             LRRC46: [1]
              LRRC7: [1]
             LRRC8D: [1]
             LRRCC1: [1]
             LRRIQ3: [1]
              LRRK1: [1]
             LRTOMT: [1]
               LSP1: [1]
              LTB4R: [1]
              LTBP4: [1]
              LUZP2: [1]
                LXN: [1]
               LY6E: [1]
             LY6G6F: [1]
              LYPD3: [1]
             LYPLA1: [1]
              MACF1: [1]
             MAD1L1: [1]
             MAD2L1: [1]
             MAGEA5: [1]
             MAGEB4: [1]
             MAGEC1: [1]
             MAGED1: [1]
              MAGI1: [1]
              MAGI3: [1]
              MAGT1: [1]
              MAK16: [1]
              MAML1: [1]
             MAMLD1: [1]
             MANSC1: [1]
               MAOA: [1]
              MAP1A: [1]
             MAP4K4: [1]
             MAPK15: [1]
              MAPK9: [1]
            MAPKBP1: [1]
             MARCH5: [1]
              MARK2: [1]
               MARS: [1]
             MBLAC2: [1]
                MCC: [1]
               MCM2: [1]
               MCM3: [1]
              MCRS1: [1]
              MDGA1: [1]
               MDN1: [1]
                ME2: [1]
              MED10: [1]
             MED12L: [1]
              MED15: [1]
              MED24: [1]
              MEOX1: [1]
              MEPCE: [1]
                MET: [1]
             METAP1: [1]
            METT10D: [1]
             METTL3: [1]
            METTL7B: [1]
             MFHAS1: [1]
              MFSD1: [1]
              MFSD3: [1]
              MFSD5: [1]
             MFSD6L: [1]
             MGAT4A: [1]
             MGAT4C: [1]
              MGAT5: [1]
           MGC87042: [1]
             MICAL3: [1]
            MICALCL: [1]
            MICALL2: [1]
               MID1: [1]
               MIOX: [1]
             MIPOL1: [1]
               MITF: [1]
              MKI67: [1]
            MKI67IP: [1]
               MKL2: [1]
              MLANA: [1]
                MLL: [1]
               MLL3: [1]
              MLLT3: [1]
                MLX: [1]
                MME: [1]
              MMP11: [1]
              MMP12: [1]
              MMP17: [1]
              MMP20: [1]
              MMP25: [1]
               MMP8: [1]
              MOAP1: [1]
              MOCS2: [1]
               MPDZ: [1]
                MPO: [1]
             MPV17L: [1]
              MPZL2: [1]
            MRGPRX3: [1]
             MRPL15: [1]
             MRPL54: [1]
              MRPL9: [1]
            MRPS18C: [1]
             MRPS33: [1]
              MRPS5: [1]
              MRPS7: [1]
              MRVI1: [1]
             MS4A12: [1]
             MS4A14: [1]
               MSMP: [1]
               MSX2: [1]
               MT1X: [1]
             MTMR12: [1]
             MTNR1B: [1]
               MTO1: [1]
              MTUS2: [1]
              MUC15: [1]
              MUC17: [1]
               MUC7: [1]
              MXRA5: [1]
            MYBBP1A: [1]
              MYBL2: [1]
              MYCL1: [1]
              MYEOV: [1]
              MYH13: [1]
              MYH14: [1]
               MYH8: [1]
              MYLK3: [1]
              MYO10: [1]
              MYO19: [1]
              MYO1G: [1]
              MYO3A: [1]
               MYOT: [1]
           NAALADL1: [1]
               NAB1: [1]
              NANOG: [1]
             NAP1L3: [1]
              NAPSA: [1]
               NARF: [1]
               NAT1: [1]
              NAT15: [1]
               NAT8: [1]
              NAT8B: [1]
               NAV2: [1]
               NAV3: [1]
             NBEAL2: [1]
              NBPF1: [1]
              NCAPG: [1]
               NCF1: [1]
             NCKAP5: [1]
            NCKAP5L: [1]
                NCL: [1]
              NCOR2: [1]
               NDE1: [1]
              NDRG1: [1]
            NDUFAF1: [1]
             NDUFB6: [1]
                NEB: [1]
              NEIL3: [1]
               NEK1: [1]
              NEK10: [1]
                NF2: [1]
              NFAT5: [1]
             NFATC1: [1]
             NFATC4: [1]
             NFE2L1: [1]
              NHEJ1: [1]
                NHS: [1]
              NHSL1: [1]
             NIF3L1: [1]
              NIPBL: [1]
               NIT2: [1]
             NKAIN1: [1]
             NKAIN2: [1]
               NKD1: [1]
               NKRF: [1]
              NLRC3: [1]
              NLRC5: [1]
              NLRP2: [1]
              NLRP4: [1]
              NLRP5: [1]
              NLRP7: [1]
                NNT: [1]
               NOL6: [1]
               NOM1: [1]
               NOS1: [1]
              NOSIP: [1]
            NOSTRIN: [1]
                NOV: [1]
               NPC1: [1]
             NPLOC4: [1]
               NPNT: [1]
               NPR1: [1]
              NPTX2: [1]
              NR1I2: [1]
              NR2C1: [1]
              NR4A1: [1]
              NRCAM: [1]
                NRK: [1]
               NSA2: [1]
               NSD1: [1]
             NT5C1B: [1]
             NT5DC3: [1]
               NTN1: [1]
              NUAK2: [1]
              NUCB1: [1]
             NUDT12: [1]
             NUFIP2: [1]
             NUP107: [1]
             NUP153: [1]
             NUP160: [1]
             NUP214: [1]
              NUPL2: [1]
              NXNL2: [1]
             NYNRIN: [1]
              OBSCN: [1]
               OCA2: [1]
             OCIAD2: [1]
               OCRL: [1]
              OLFM4: [1]
            ONECUT2: [1]
             OR10G7: [1]
             OR10H3: [1]
             OR10H5: [1]
             OR10J3: [1]
             OR10J5: [1]
             OR11L1: [1]
             OR13C2: [1]
              OR1S1: [1]
             OR2AG1: [1]
             OR2AT4: [1]
              OR2C1: [1]
              OR2F1: [1]
              OR2G2: [1]
              OR2J2: [1]
              OR2L2: [1]
              OR2L8: [1]
              OR2T4: [1]
              OR2W3: [1]
              OR2W5: [1]
              OR3A2: [1]
              OR4A5: [1]
             OR4C16: [1]
              OR4C6: [1]
              OR4D2: [1]
              OR4P4: [1]
              OR4S2: [1]
             OR51B4: [1]
             OR52W1: [1]
              OR5M8: [1]
              OR5T3: [1]
             OR6C68: [1]
              OR6V1: [1]
              OR7D4: [1]
             OR8B12: [1]
              OR8B3: [1]
              ORC1L: [1]
             OSBPL9: [1]
              OSGEP: [1]
                OTC: [1]
               OTOF: [1]
               OTX1: [1]
             PABPC3: [1]
             PABPC5: [1]
              PACS1: [1]
              PACS2: [1]
           PAFAH1B1: [1]
              PAIP1: [1]
               PAK4: [1]
              PAPD5: [1]
             PAPOLG: [1]
             PAPSS1: [1]
              PAQR5: [1]
               PARN: [1]
             PARP10: [1]
             PARP14: [1]
              PASD1: [1]
             PBXIP1: [1]
              PCDH1: [1]
             PCDH10: [1]
              PCDH7: [1]
            PCDHA10: [1]
             PCDHA6: [1]
             PCDHB1: [1]
            PCDHB16: [1]
             PCDHB3: [1]
             PCDHB8: [1]
             PCDHB9: [1]
            PCDHGB7: [1]
            PCDHGC5: [1]
               PCM1: [1]
               PCNT: [1]
              PCSK2: [1]
               PCTP: [1]
            PCYOX1L: [1]
             PDCD2L: [1]
             PDE11A: [1]
              PDE3A: [1]
              PDE4C: [1]
              PDE5A: [1]
              PDE8A: [1]
              PDGFD: [1]
               PDK3: [1]
             PDLIM2: [1]
              PDRG1: [1]
              PDSS2: [1]
             PDZRN3: [1]
               PEG3: [1]
               PENK: [1]
               PER1: [1]
               PER2: [1]
               PEX1: [1]
              PFDN5: [1]
             PFKFB3: [1]
              PGBD1: [1]
               PGK1: [1]
            PGPEP1L: [1]
                PGR: [1]
            PHACTR3: [1]
               PHC2: [1]
              PHF14: [1]
              PHF16: [1]
               PHF3: [1]
               PHF8: [1]
             PHLPP2: [1]
              PHTF2: [1]
               PHYH: [1]
              PIAS1: [1]
              PIBF1: [1]
               PIF1: [1]
             PIK3R2: [1]
             PIK3R4: [1]
               PIRT: [1]
            PITPNM1: [1]
               PKD1: [1]
             PKD1L3: [1]
             PKD2L1: [1]
             PKD2L2: [1]
              PKHD1: [1]
            PKHD1L1: [1]
               PKP2: [1]
            PLA2G4A: [1]
               PLAU: [1]
               PLB1: [1]
              PLCB3: [1]
              PLCB4: [1]
               PLEC: [1]
            PLEKHG3: [1]
            PLEKHH1: [1]
            PLEKHJ1: [1]
            PLEKHM1: [1]
            PLEKHO2: [1]
              PLIN2: [1]
              PLIN4: [1]
              PLOD3: [1]
               PLS3: [1]
             PLXNA2: [1]
             PLXNA4: [1]
             PLXNC1: [1]
             PM20D1: [1]
               PMS2: [1]
              PNMA1: [1]
                PNN: [1]
               PNO1: [1]
             PNPLA8: [1]
               POGZ: [1]
              POLD1: [1]
              POLD3: [1]
            POLDIP3: [1]
              POLG2: [1]
             POLR3C: [1]
              PORCN: [1]
              POTEF: [1]
           PPARGC1B: [1]
               PPIB: [1]
                PPL: [1]
           PPP1R15A: [1]
            PPP1R3A: [1]
            PPP1R3F: [1]
            PPP2R5A: [1]
              PPRC1: [1]
             PRDM10: [1]
             PRDM11: [1]
             PRDM14: [1]
               PRG4: [1]
              PRIM2: [1]
             PRKACA: [1]
             PRKACB: [1]
              PRKD1: [1]
              PRKDC: [1]
               PRLR: [1]
             PROKR2: [1]
             PRPF19: [1]
            PRPF38B: [1]
              PRPS2: [1]
              PRR14: [1]
              PRRG3: [1]
              PRSS1: [1]
             PRSS41: [1]
             PRSS45: [1]
             PRSS55: [1]
             PRUNE2: [1]
              PSMA3: [1]
              PSMA4: [1]
              PSMA6: [1]
              PSMA8: [1]
             PSMB11: [1]
              PSMC2: [1]
              PSMC5: [1]
              PSMD3: [1]
            PSTPIP2: [1]
              PTCD1: [1]
             PTCHD2: [1]
             PTCHD3: [1]
               PTEN: [1]
              PTGDR: [1]
              PTH2R: [1]
              PTOV1: [1]
             PTPMT1: [1]
             PTPN12: [1]
             PTPN14: [1]
             PTPN18: [1]
             PTPN21: [1]
              PTPRB: [1]
              PTPRK: [1]
              PTPRR: [1]
              PTPRS: [1]
               PUM2: [1]
               PWP1: [1]
              PYGO1: [1]
            PYROXD1: [1]
              QRFPR: [1]
              QSOX1: [1]
             R3HDM1: [1]
             R3HDM2: [1]
          RAB11FIP2: [1]
          RAB11FIP3: [1]
          RAB11FIP4: [1]
              RAB18: [1]
              RAB26: [1]
             RAB33A: [1]
             RAB39B: [1]
              RAB3C: [1]
           RAB3GAP2: [1]
              RAB43: [1]
            RABGEF1: [1]
              RABL3: [1]
               RAC3: [1]
           RAD51AP1: [1]
           RALGAPA1: [1]
           RALGAPA2: [1]
            RALGAPB: [1]
             RANBP6: [1]
           RAP1GDS1: [1]
            RAPGEF2: [1]
            RAPGEF3: [1]
               RARA: [1]
            RARRES1: [1]
             RASAL3: [1]
           RASGEF1C: [1]
            RASGRP2: [1]
            RASGRP4: [1]
             RASSF9: [1]
                RB1: [1]
              RBBP6: [1]
               RBL2: [1]
              RBM11: [1]
              RBM19: [1]
              RBM20: [1]
              RBM23: [1]
              RBM28: [1]
              RBM39: [1]
              RBM44: [1]
              RC3H2: [1]
             RCBTB2: [1]
               RCC2: [1]
                RDX: [1]
               REC8: [1]
             RECQL4: [1]
              REEP2: [1]
               RELA: [1]
               REM1: [1]
                REN: [1]
              RENBP: [1]
               REV1: [1]
              REV3L: [1]
               RFC4: [1]
               RFFL: [1]
               RFX8: [1]
               RGL1: [1]
               RGL4: [1]
               RGMA: [1]
               RGS2: [1]
               RGS9: [1]
             RHBDF1: [1]
               RHOJ: [1]
              RIBC2: [1]
              RIMS1: [1]
               RINL: [1]
              RIOK3: [1]
              RIPK2: [1]
                RLF: [1]
              RLTPR: [1]
              RMND1: [1]
             RNF139: [1]
            RNF144A: [1]
             RNF212: [1]
              RNF26: [1]
             ROBLD3: [1]
              ROCK1: [1]
              ROCK2: [1]
               ROD1: [1]
               ROS1: [1]
                RP1: [1]
               RPA4: [1]
              RPE65: [1]
               RPF1: [1]
              RPL19: [1]
            RPL26L1: [1]
               RPL3: [1]
              RPL34: [1]
               RPN1: [1]
              RPRD2: [1]
              RPS20: [1]
              RPS26: [1]
             RPS4Y1: [1]
            RPS6KA3: [1]
            RPS6KB1: [1]
              RQCD1: [1]
               RRP8: [1]
               RRS1: [1]
             RSPRY1: [1]
              RTCD1: [1]
              RTKN2: [1]
               RTN2: [1]
              RUFY3: [1]
             RUVBL1: [1]
             RWDD2B: [1]
               RYR1: [1]
               RYR3: [1]
               SACS: [1]
              SALL1: [1]
             SAMHD1: [1]
             SAP130: [1]
              SAPS1: [1]
               SAT1: [1]
               SBF1: [1]
              SBNO1: [1]
              SBNO2: [1]
             SC4MOL: [1]
               SCAP: [1]
             SCAPER: [1]
             SCARB2: [1]
               SCEL: [1]
             SCN11A: [1]
              SCN4A: [1]
              SCN7A: [1]
              SCN9A: [1]
               SCO1: [1]
               SCOC: [1]
               SCP2: [1]
             SCUBE1: [1]
             SCUBE2: [1]
              SCYL3: [1]
              SDAD1: [1]
               SDK2: [1]
            SEC14L5: [1]
             SEC24A: [1]
             SEC24C: [1]
             SEC24D: [1]
             SEC31A: [1]
             SEC61B: [1]
              SEC63: [1]
          SECISBP2L: [1]
               SELE: [1]
               SELP: [1]
             SEMA3D: [1]
             SEMA4B: [1]
              SEPN1: [1]
             SEPT11: [1]
              SEPT5: [1]
          SERPINA10: [1]
           SERPINA3: [1]
          SERPINB11: [1]
          SERPINB13: [1]
           SERPINB7: [1]
           SERPINB8: [1]
           SERPING1: [1]
           SERPINI1: [1]
              SETD3: [1]
              SETD4: [1]
              SETD5: [1]
              SETD6: [1]
              SF3A3: [1]
              SF3B1: [1]
             SFMBT1: [1]
             SFMBT2: [1]
             SFRS11: [1]
             SFRS15: [1]
            SFRS2IP: [1]
              SFTPD: [1]
               SGK1: [1]
              SGPL1: [1]
              SGPP1: [1]
              SGSM1: [1]
             SH3RF1: [1]
             SHISA9: [1]
              SIRPG: [1]
              SIRT1: [1]
               SIX4: [1]
               SKIL: [1]
             SLAMF1: [1]
            SLC12A4: [1]
            SLC12A9: [1]
            SLC13A3: [1]
            SLC13A4: [1]
            SLC15A3: [1]
            SLC15A4: [1]
            SLC16A3: [1]
            SLC16A4: [1]
            SLC16A9: [1]
            SLC17A1: [1]
            SLC17A2: [1]
            SLC17A3: [1]
            SLC19A3: [1]
            SLC22A2: [1]
            SLC22A7: [1]
            SLC23A1: [1]
            SLC24A3: [1]
           SLC25A12: [1]
           SLC25A14: [1]
           SLC25A23: [1]
           SLC25A36: [1]
           SLC25A45: [1]
            SLC26A4: [1]
            SLC27A1: [1]
            SLC28A1: [1]
            SLC29A1: [1]
            SLC2A11: [1]
            SLC2A14: [1]
             SLC2A3: [1]
           SLC2A4RG: [1]
             SLC2A8: [1]
            SLC35A2: [1]
            SLC35A5: [1]
            SLC35B2: [1]
           SLC39A13: [1]
             SLC3A1: [1]
            SLC44A1: [1]
            SLC44A3: [1]
            SLC45A2: [1]
             SLC4A3: [1]
             SLC4A7: [1]
            SLC5A12: [1]
             SLC5A4: [1]
            SLC6A17: [1]
             SLC6A5: [1]
             SLC6A8: [1]
            SLC7A11: [1]
             SLC7A2: [1]
             SLC7A4: [1]
             SLC7A6: [1]
            SLC9A10: [1]
             SLC9A2: [1]
             SLC9A3: [1]
             SLC9A5: [1]
            SLCO1B1: [1]
            SLCO2B1: [1]
            SLCO3A1: [1]
            SLCO4A1: [1]
             SLFN11: [1]
             SLFN14: [1]
                SLK: [1]
              SLMAP: [1]
            SMARCA2: [1]
            SMARCA4: [1]
           SMARCAD1: [1]
           SMARCAL1: [1]
              SMEK1: [1]
               SMG6: [1]
                SMO: [1]
              SMYD4: [1]
             SNAP91: [1]
             SNCAIP: [1]
            SNRNP27: [1]
              SNX18: [1]
              SNX32: [1]
               SNX8: [1]
              SOAT2: [1]
             SOHLH1: [1]
             SORBS2: [1]
             SORCS2: [1]
             SORCS3: [1]
              SORT1: [1]
               SOX9: [1]
                SP1: [1]
             SP140L: [1]
            SPATA17: [1]
              SPC25: [1]
              SPCS1: [1]
               SPEN: [1]
             SPINT1: [1]
             SPOCK1: [1]
             SPRED1: [1]
              SPTA1: [1]
             SPTBN1: [1]
             SPTLC2: [1]
              SQRDL: [1]
              SRBD1: [1]
              SRCAP: [1]
             SRGAP2: [1]
                SRL: [1]
              SRP68: [1]
              SRP72: [1]
              SRPK2: [1]
              SRRM1: [1]
              SSBP2: [1]
               SSH2: [1]
             SSSCA1: [1]
            ST3GAL3: [1]
            ST6GAL1: [1]
               ST7L: [1]
            ST8SIA3: [1]
              STAB2: [1]
              STAG3: [1]
             STAMBP: [1]
               STAR: [1]
              STAT1: [1]
              STAU2: [1]
               STC2: [1]
              STMN2: [1]
              STON2: [1]
              STX19: [1]
               STX2: [1]
               STX7: [1]
             SUCLG1: [1]
            SULT2B1: [1]
              SURF4: [1]
              SUSD2: [1]
            SUV39H2: [1]
              SYDE2: [1]
                SYK: [1]
              SYMPK: [1]
              SYNJ1: [1]
              SYNJ2: [1]
            SYNJ2BP: [1]
             SYNPO2: [1]
               SYT5: [1]
              SYTL3: [1]
              SYTL5: [1]
              SYVN1: [1]
              TAAR2: [1]
               TAB3: [1]
               TAC3: [1]
              TACC2: [1]
              TACR1: [1]
             TADA2A: [1]
              TAF15: [1]
               TAF5: [1]
              TAF7L: [1]
             TALDO1: [1]
               TANK: [1]
             TAS1R3: [1]
            TAS2R31: [1]
            TAS2R46: [1]
            TAS2R50: [1]
             TBC1D2: [1]
             TBC1D4: [1]
             TBC1D8: [1]
              TBL1X: [1]
                TBP: [1]
              TCEA2: [1]
             TCEAL5: [1]
               TCF4: [1]
             TCHHL1: [1]
              TDRD5: [1]
              TDRD7: [1]
              TDRD9: [1]
                TEC: [1]
              TECRL: [1]
              TENC1: [1]
              TEX15: [1]
             TEX264: [1]
               TFEB: [1]
               TFR2: [1]
                 TG: [1]
              TGFB2: [1]
             TGFBR3: [1]
               TGM5: [1]
              THADA: [1]
              THBS3: [1]
             THRAP3: [1]
             THSD7A: [1]
             TICAM1: [1]
           TIMELESS: [1]
            TIMM17B: [1]
              TINF2: [1]
               TJP2: [1]
               TLN2: [1]
             TM7SF4: [1]
              TMCC3: [1]
              TMCO3: [1]
              TMED6: [1]
            TMEM100: [1]
            TMEM129: [1]
            TMEM144: [1]
            TMEM154: [1]
           TMEM184C: [1]
           TMEM185A: [1]
     TMEM189-UBE2V1: [1]
            TMEM225: [1]
           TMEM229A: [1]
            TMEM232: [1]
            TMEM50B: [1]
             TMEM59: [1]
            TMEM63B: [1]
             TMEM8A: [1]
             TMEM98: [1]
              TMLHE: [1]
              TMOD1: [1]
              TMOD2: [1]
              TMOD3: [1]
           TMPRSS13: [1]
           TMPRSS15: [1]
            TMPRSS6: [1]
            TNFAIP1: [1]
            TNFAIP3: [1]
           TNFRSF1A: [1]
              TNKS2: [1]
              TNNT1: [1]
             TNRC18: [1]
               TNS3: [1]
               TOE1: [1]
             TOPBP1: [1]
             TOPORS: [1]
            TP53BP1: [1]
            TP53BP2: [1]
           TP53INP1: [1]
               TPP2: [1]
               TPRN: [1]
              TRA2A: [1]
           TRAF3IP2: [1]
              TRAF6: [1]
             TREML1: [1]
              TRHDE: [1]
             TRIM11: [1]
             TRIM24: [1]
             TRIM41: [1]
             TRIM42: [1]
             TRIM59: [1]
             TRIM62: [1]
               TRIO: [1]
             TRIP11: [1]
             TRIP12: [1]
             TRMT2B: [1]
             TROVE2: [1]
            TRPC4AP: [1]
              TRPC7: [1]
              TRRAP: [1]
              TRUB2: [1]
             TSGA10: [1]
           TSGA10IP: [1]
              TSHZ2: [1]
              TSHZ3: [1]
           TSNAXIP1: [1]
             TSPAN6: [1]
              TSSC1: [1]
              TTC14: [1]
              TTC18: [1]
             TTC21A: [1]
              TTC24: [1]
              TTC28: [1]
               TTC3: [1]
              TTC37: [1]
              TTYH3: [1]
              TUBB3: [1]
            TUBGCP6: [1]
              TUSC5: [1]
            TXNDC15: [1]
             TXNDC6: [1]
              TXNIP: [1]
               UACA: [1]
               UBA1: [1]
              UBAP2: [1]
               UBN2: [1]
              UBOX5: [1]
               UBR2: [1]
               UBR3: [1]
             UGT1A8: [1]
             UGT2A3: [1]
          UHRF1BP1L: [1]
              UHRF2: [1]
              ULBP2: [1]
               ULK3: [1]
               ULK4: [1]
               UMOD: [1]
               UMPS: [1]
             UNC119: [1]
              UNC50: [1]
              UPK3B: [1]
               URB2: [1]
              USP12: [1]
              USP15: [1]
              USP18: [1]
              USP22: [1]
              USP37: [1]
               USP4: [1]
              USP40: [1]
              USP42: [1]
             USP6NL: [1]
               USP8: [1]
              VARS2: [1]
             VCPIP1: [1]
               VCX2: [1]
                VDR: [1]
              VIPAR: [1]
              VN1R2: [1]
              VPRBP: [1]
             VPS13A: [1]
             VPS13B: [1]
              VSIG4: [1]
              VSIG8: [1]
            WBSCR17: [1]
              WDFY3: [1]
              WDR18: [1]
              WDR35: [1]
              WDR46: [1]
              WDR52: [1]
              WDR65: [1]
              WDR74: [1]
              WDR77: [1]
              WDR78: [1]
               WDR8: [1]
            WFIKKN2: [1]
               WFS1: [1]
              WIPI2: [1]
               WNK3: [1]
               WNK4: [1]
               WTAP: [1]
               XCL1: [1]
                XDH: [1]
              XIRP1: [1]
              XYLT1: [1]
             YEATS2: [1]
             YTHDF3: [1]
              YWHAB: [1]
             YY1AP1: [1]
               ZACN: [1]
              ZBTB3: [1]
             ZBTB37: [1]
             ZBTB44: [1]
             ZBTB46: [1]
             ZBTB7C: [1]
             ZC3H13: [1]
            ZC3HAV1: [1]
             ZC3HC1: [1]
            ZCCHC13: [1]
            ZCCHC14: [1]
            ZCCHC16: [1]
             ZCCHC2: [1]
             ZCCHC5: [1]
             ZCCHC8: [1]
             ZCCHC9: [1]
              ZDBF2: [1]
             ZDHHC1: [1]
               ZEB1: [1]
              ZFHX3: [1]
              ZFHX4: [1]
             ZFP106: [1]
             ZFP112: [1]
              ZFP14: [1]
              ZFP91: [1]
              ZFPM2: [1]
                ZFY: [1]
               ZHX1: [1]
               ZHX3: [1]
               ZIK1: [1]
               ZIM3: [1]
           ZMPSTE24: [1]
              ZMYM3: [1]
              ZMYM5: [1]
            ZMYND11: [1]
            ZMYND17: [1]
             ZNF100: [1]
              ZNF12: [1]
             ZNF121: [1]
             ZNF132: [1]
             ZNF141: [1]
             ZNF169: [1]
             ZNF175: [1]
             ZNF184: [1]
             ZNF185: [1]
             ZNF187: [1]
             ZNF215: [1]
             ZNF224: [1]
             ZNF227: [1]
             ZNF232: [1]
             ZNF235: [1]
             ZNF238: [1]
              ZNF24: [1]
             ZNF274: [1]
            ZNF280C: [1]
             ZNF284: [1]
             ZNF287: [1]
             ZNF304: [1]
             ZNF320: [1]
             ZNF343: [1]
             ZNF350: [1]
             ZNF383: [1]
             ZNF426: [1]
             ZNF439: [1]
             ZNF449: [1]
             ZNF467: [1]
             ZNF468: [1]
             ZNF496: [1]
             ZNF507: [1]
             ZNF521: [1]
             ZNF532: [1]
             ZNF548: [1]
              ZNF57: [1]
             ZNF584: [1]
             ZNF595: [1]
             ZNF607: [1]
             ZNF609: [1]
             ZNF610: [1]
             ZNF611: [1]
             ZNF621: [1]
             ZNF623: [1]
             ZNF641: [1]
             ZNF649: [1]
             ZNF653: [1]
             ZNF677: [1]
             ZNF684: [1]
             ZNF687: [1]
              ZNF70: [1]
              ZNF79: [1]
             ZNF792: [1]
             ZNF799: [1]
             ZNF800: [1]
             ZNF805: [1]
             ZNF829: [1]
             ZNF841: [1]
              ZNF91: [1]
              ZNF99: [1]
             ZRANB1: [1]
             ZRANB3: [1]
             ZSWIM3: [1]
             ZYG11B: [1]
              ZZEF1: [1]
             ABCA12: [2]
             ABCA13: [2]
              ABCA4: [2]
             ACSBG1: [2]
             ACVR1B: [2]
             ADAM29: [2]
           ALDH18A1: [2]
             ANAPC1: [2]
               ANK2: [2]
               ANK3: [2]
    ANKHD1-EIF4EBP3: [2]
           ARHGAP28: [2]
              ASAP1: [2]
              ASCC3: [2]
               ASPM: [2]
              ATAD5: [2]
                ATM: [2]
               ATRX: [2]
              ATXN2: [2]
               AVIL: [2]
           B4GALNT3: [2]
             BAT2L1: [2]
              BAZ2B: [2]
               BCAN: [2]
              BIRC6: [2]
               BPTF: [2]
              BRCA1: [2]
              BTNL9: [2]
           C12orf11: [2]
           C16orf62: [2]
           C22orf42: [2]
                 C3: [2]
                 C5: [2]
            C5orf42: [2]
            C5orf60: [2]
            C7orf23: [2]
             CABIN1: [2]
            CACNA1C: [2]
            CAMSAP1: [2]
              CD180: [2]
           CDC42BPA: [2]
              CDH12: [2]
               CDH7: [2]
              CDK13: [2]
              CFHR3: [2]
              CLCN6: [2]
              CLCN7: [2]
              CNOT1: [2]
              COASY: [2]
             COBLL1: [2]
             COL1A2: [2]
             COL2A1: [2]
             COL4A5: [2]
             COL6A3: [2]
           CRISPLD1: [2]
              CYB5B: [2]
            DENND2D: [2]
               DGKH: [2]
              DIP2C: [2]
                DMD: [2]
              DNAH3: [2]
              DNAH9: [2]
            DNAJC10: [2]
              DNHD1: [2]
              DOCK2: [2]
              DPCR1: [2]
              DPP10: [2]
                DST: [2]
              DUOX1: [2]
            DYNC1H1: [2]
              EPHA1: [2]
              EPHB6: [2]
              ERBB4: [2]
               ETF1: [2]
             FAM59A: [2]
             FCGR3B: [2]
              FLAD1: [2]
               GCC1: [2]
             GGNBP2: [2]
              GON4L: [2]
             GPR179: [2]
              GPR98: [2]
             GRIN2B: [2]
               GZF1: [2]
               HCN3: [2]
              HERC2: [2]
              HERC3: [2]
             HIVEP1: [2]
               HKR1: [2]
             HSPA4L: [2]
              HYOU1: [2]
              IFI30: [2]
               INSC: [2]
              ITGB1: [2]
              ITIH4: [2]
              ITPR2: [2]
              KCND2: [2]
              KCNK5: [2]
              KCNT2: [2]
              KDM4C: [2]
              KDM5B: [2]
              KIF1A: [2]
              KIF4B: [2]
               KLF8: [2]
               KLF9: [2]
              KLHL7: [2]
              LAMA2: [2]
              LAMA5: [2]
             LILRB5: [2]
               LRP1: [2]
               LRP2: [2]
               LRP4: [2]
              LRRK2: [2]
               LYST: [2]
            MAGEA10: [2]
              MAML3: [2]
             MAN2C1: [2]
             MAP3K4: [2]
            MARCH10: [2]
              MED14: [2]
               MED4: [2]
             MEGF10: [2]
               MSR1: [2]
              MTMR4: [2]
               MUC2: [2]
              MUTYH: [2]
               MYH1: [2]
             MYO15A: [2]
             MYO18A: [2]
              MYT1L: [2]
             NDUFS1: [2]
             NFE2L2: [2]
             NHEDC2: [2]
              NHSL2: [2]
             NKAIN3: [2]
              NLRP1: [2]
               NOP2: [2]
             NOTCH2: [2]
              NT5C3: [2]
              NTRK3: [2]
            NUP210L: [2]
               ODZ1: [2]
             OR10G4: [2]
             OR4C12: [2]
             OR56A4: [2]
              OR5H1: [2]
              OTOL1: [2]
              P2RX4: [2]
             PABPC1: [2]
             PCDH15: [2]
             PCDHA8: [2]
            PCDHGA7: [2]
              PCSK9: [2]
              PDE1B: [2]
             PDGFRA: [2]
             PDGFRB: [2]
              PDZD2: [2]
              PELI2: [2]
            PGLYRP3: [2]
               PKN2: [2]
            PLEKHA5: [2]
              PREX1: [2]
           PRICKLE1: [2]
               PRTG: [2]
             PTPDC1: [2]
              PTPRC: [2]
              PTPRG: [2]
              PTPRT: [2]
              RAD50: [2]
             RANBP2: [2]
              RBM27: [2]
               RDM1: [2]
               RFC1: [2]
              RFPL2: [2]
              RNF25: [2]
              RRP12: [2]
               RYR2: [2]
             SAMD4A: [2]
              SCRN1: [2]
             SEMA3E: [2]
             SEMA4G: [2]
             SETBP1: [2]
              SGIP1: [2]
              SHMT1: [2]
            SHROOM1: [2]
             SLC4A1: [2]
            SLC5A10: [2]
            SLCO1B3: [2]
            SLCO4C1: [2]
               SMC3: [2]
              SMCR8: [2]
               SOS1: [2]
             SPOCD1: [2]
               SYBU: [2]
              SYNE1: [2]
              SYT12: [2]
              TAF1L: [2]
              TCEB1: [2]
              TCF12: [2]
              TCP11: [2]
              TDRD6: [2]
              TGFBI: [2]
              THBS1: [2]
             THSD7B: [2]
            TMEM111: [2]
             TMEM69: [2]
              TMTC3: [2]
                TNC: [2]
             TNNI3K: [2]
                TNR: [2]
             TP53I3: [2]
             TPRG1L: [2]
             TRIM21: [2]
               TSC1: [2]
              TYRP1: [2]
             UBLCP1: [2]
               UBR1: [2]
             UGT1A7: [2]
              USP24: [2]
              USP51: [2]
               VCAN: [2]
             VPS13C: [2]
              VPS18: [2]
               VRK2: [2]
              WDFY4: [2]
              WDR87: [2]
               WSB2: [2]
              XIRP2: [2]
               XKR6: [2]
               XPO5: [2]
            ZDHHC16: [2]
            ZFYVE26: [2]
              ZMAT1: [2]
              ZMYM1: [2]
              ZMYM2: [2]
             ZNF221: [2]
             ZNF600: [2]
             ZNF827: [2]
             ZNF844: [2]
              ZPLD1: [2]
            ZSCAN29: [2]
              ZUFSP: [2]
              BOD1L: [3]
               CHD7: [3]
            COL15A1: [3]
              DNAH7: [3]
            FAM200A: [3]
               FBN1: [3]
                FLG: [3]
             GCN1L1: [3]
             GREB1L: [3]
             HGC6.3: [3]
             IQGAP2: [3]
             KBTBD8: [3]
              KDM4A: [3]
              KIF14: [3]
             LOXHD1: [3]
              NLRP9: [3]
              NRXN1: [3]
             OR52J3: [3]
             PCDHB6: [3]
               PCLO: [3]
               PCNX: [3]
               POT1: [3]
             PTPN13: [3]
              PTPRQ: [3]
             RNF213: [3]
             SPHKAP: [3]
              TCF20: [3]
               UPF2: [3]
            Unknown: [3]
               ZBBX: [3]
              KDM5C: [4]
               MTOR: [4]
              SYNE2: [4]
               TP53: [4]
               UBR4: [4]
              USH2A: [4]
              CHEK2: [5]
               MLL2: [6]
               MUC4: [6]
               BAP1: [8]
              MUC16: [9]
                TTN: [9]
              SETD2: [12]
                VHL: [22]
              PBRM1: [25]
          ----TOTAL: [2656]

Patients affected:
    KIRC-A3-3311: [1]
    KIRC-A3-3316: [1]
    KIRC-A3-3320: [1]
    KIRC-A3-3326: [1]
    KIRC-A3-3351: [1]
    KIRC-A3-3357: [1]
    KIRC-A3-3365: [1]
    KIRC-A3-3372: [1]
    KIRC-A3-3380: [1]
    KIRC-A3-3382: [1]
    KIRC-A3-3383: [1]
    KIRC-A3-3385: [1]
    KIRC-A3-3387: [1]
    KIRC-AS-3778: [1]
    KIRC-B0-4827: [1]
    KIRC-B0-4842: [1]
    KIRC-B0-5077: [1]
    KIRC-B0-5094: [1]
    KIRC-B0-5113: [1]
    KIRC-B0-5121: [1]
    KIRC-B0-5691: [1]
    KIRC-B0-5692: [1]
    KIRC-B0-5698: [1]
    KIRC-B0-5699: [1]
    KIRC-B0-5706: [1]
    KIRC-B0-5707: [1]
    KIRC-B0-5812: [1]
    KIRC-B2-5633: [1]
    KIRC-B8-5164: [1]
    KIRC-B8-5551: [1]
    KIRC-BP-4164: [1]
    KIRC-BP-4167: [1]
    KIRC-BP-4782: [1]
    KIRC-BP-4801: [1]
    KIRC-BP-4971: [1]
    KIRC-BP-4974: [1]
    KIRC-BP-4988: [1]
    KIRC-BP-4989: [1]
    KIRC-BP-4991: [1]
    KIRC-BP-4992: [1]
    KIRC-BP-4993: [1]
    KIRC-BP-5168: [1]
    KIRC-BP-5170: [1]
    KIRC-BP-5178: [1]
    KIRC-BP-5185: [1]
    KIRC-BP-5190: [1]
    KIRC-BP-5200: [1]
    KIRC-CJ-4899: [1]
    KIRC-CJ-4916: [1]
    KIRC-CJ-5671: [1]
    KIRC-CJ-5675: [1]
    KIRC-CJ-5678: [1]
    KIRC-CJ-5683: [1]
    KIRC-CJ-6027: [1]
    KIRC-CJ-6028: [1]
    KIRC-CJ-6032: [1]
    KIRC-CW-5581: [1]
    KIRC-CW-5583: [1]
    KIRC-CW-5591: [1]
    KIRC-CW-6087: [1]
    KIRC-CZ-4859: [1]
    KIRC-CZ-5985: [1]
    KIRC-EU-5905: [1]
    KIRC-EU-5906: [1]
    KIRC-A3-3317: [2]
    KIRC-A3-3322: [2]
    KIRC-A3-3358: [2]
    KIRC-A3-3376: [2]
    KIRC-AK-3444: [2]
    KIRC-B0-4712: [2]
    KIRC-B0-5081: [2]
    KIRC-B0-5097: [2]
    KIRC-B0-5106: [2]
    KIRC-B0-5115: [2]
    KIRC-B0-5116: [2]
    KIRC-B0-5119: [2]
    KIRC-B0-5695: [2]
    KIRC-B0-5701: [2]
    KIRC-B0-5703: [2]
    KIRC-B0-5705: [2]
    KIRC-B0-5709: [2]
    KIRC-B2-5635: [2]
    KIRC-B2-5641: [2]
    KIRC-B8-4153: [2]
    KIRC-B8-5158: [2]
    KIRC-B8-5545: [2]
    KIRC-B8-5546: [2]
    KIRC-BP-4964: [2]
    KIRC-BP-4982: [2]
    KIRC-BP-5008: [2]
    KIRC-BP-5176: [2]
    KIRC-BP-5180: [2]
    KIRC-BP-5192: [2]
    KIRC-CJ-4902: [2]
    KIRC-CJ-5679: [2]
    KIRC-CJ-5681: [2]
    KIRC-CJ-5682: [2]
    KIRC-CJ-5684: [2]
    KIRC-CJ-6030: [2]
    KIRC-CW-5580: [2]
    KIRC-CW-5588: [2]
    KIRC-CW-5589: [2]
    KIRC-CW-6093: [2]
    KIRC-CZ-4853: [2]
    KIRC-CZ-4856: [2]
    KIRC-CZ-5986: [2]
    KIRC-A3-3346: [3]
    KIRC-B0-5088: [3]
    KIRC-B0-5092: [3]
    KIRC-B0-5096: [3]
    KIRC-B0-5099: [3]
    KIRC-B2-4102: [3]
    KIRC-BP-4963: [3]
    KIRC-BP-5173: [3]
    KIRC-BP-5199: [3]
    KIRC-B0-5075: [4]
    KIRC-CJ-6031: [4]
    KIRC-AK-3429: [9]
    KIRC-B0-5400: [10]
    KIRC-CJ-4637: [12]
    KIRC-B2-4101: [13]
    KIRC-CZ-5452: [15]
    KIRC-A3-3347: [17]
    KIRC-AK-3458: [17]
    KIRC-A3-3349: [18]
    KIRC-CZ-5458: [18]
    KIRC-B8-4148: [19]
    KIRC-CZ-4863: [21]
    KIRC-BP-4162: [22]
    KIRC-CJ-4641: [22]
    KIRC-CZ-5454: [22]
    KIRC-CJ-4640: [23]
    KIRC-B0-5080: [24]
    KIRC-CZ-5470: [24]
    KIRC-A3-3362: [25]
    KIRC-CZ-5469: [26]
    KIRC-AK-3456: [28]
    KIRC-B0-5402: [28]
    KIRC-B4-5377: [29]
    KIRC-CZ-5460: [29]
    KIRC-B0-4818: [30]
    KIRC-B0-5399: [30]
    KIRC-AK-3436: [31]
    KIRC-B0-4816: [33]
    KIRC-B0-4706: [34]
    KIRC-BP-4163: [34]
    KIRC-CJ-4644: [34]
    KIRC-CZ-5462: [34]
    KIRC-B0-4810: [35]
    KIRC-B0-4815: [35]
    KIRC-CZ-5464: [35]
    KIRC-CZ-5461: [36]
    KIRC-CZ-5466: [36]
    KIRC-B8-4622: [37]
    KIRC-CJ-4643: [37]
    KIRC-CZ-5463: [37]
    KIRC-B8-4151: [38]
    KIRC-CZ-5467: [38]
    KIRC-B8-4154: [39]
    KIRC-CJ-4639: [39]
    KIRC-CZ-5456: [39]
    KIRC-B0-4852: [40]
    KIRC-BP-4770: [42]
    KIRC-BP-4161: [44]
    KIRC-B8-4143: [45]
    KIRC-CZ-4866: [46]
    KIRC-B8-4620: [47]
    KIRC-CJ-4638: [47]
    KIRC-CZ-5457: [48]
    KIRC-AK-3451: [52]
    KIRC-CZ-5453: [54]
    KIRC-B0-4710: [55]
    KIRC-B2-4098: [56]
    KIRC-AK-3430: [57]
    KIRC-B8-4621: [59]
    KIRC-CZ-5451: [61]
    KIRC-B2-4099: [63]
    KIRC-B0-4811: [65]
    KIRC-CJ-4634: [68]
    KIRC-CZ-5459: [68]
    KIRC-B2-3924: [69]
    KIRC-CZ-5465: [83]
    KIRC-CZ-5468: [92]
       ----TOTAL: [2656]
convert_chr: assuming human for chrX/chrY
Collapsed 28908 muts to 26038 muts
Getting context: 38% 76% 

Done.
Saved KIRC.mutation_preprocessing_report.txt
Saved KIRC.maf
Total of 293 patients had both MAF and WIG data.
Saved KIRC.patients.txt
Saved KIRC.coverage.prepare.txt
libdir: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigPreprocess.90.3705/
LD_LIBRARY_PATH is .:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/runtime/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/bin/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/os/glnxa64:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/server:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64/client:/broad/software/nonfree/Linux/redhat_5_x86_64/pkgs/matlab_2009a/sys/java/jre/glnxa64/jre/lib/amd64
MCR_CACHE_ROOT is  /xchip/cga/gdac-prod/tcga-gdac-genepattern/jobResults/162674
mFile: fh_MutSigPreprocess
executing: /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigPreprocess.90.3705/fh_MutSigPreprocess /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/MutSigPreprocess.90.3705/ -i KIRC -b hg19 -t /xchip/cga1/annotation/db/capture/Refseq_exons_good_20101221_hg19.txt -c /xchip/cga1/annotation/db/tracks/hg19/c65e -bd /xchip/cga1/annotation/db/ucsc/hg19 -cat 4 -maf1 /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis5276919590263357983.att_maf1.input.tsv -maf3 /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis8040062206184984819.att_maf3.input.tsv -maflabel1 Broad -maflabel2 WashU -maflabel3 Baylor -wig1 /xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/temp/attachments/cgaadm_deadline/Axis4698690415801847701.att_wig1.input.tsv -p /xchip/cga1/reference/mutsig_params/MutSig2.0.params.txt
