Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	TCGA-BC-4072-01B-11D-A151-01	TCGA-BC-4073-01B-02D-A12Y-01	TCGA-BC-A10Q-01A-11D-A12Y-01	TCGA-BC-A10R-01A-11D-A12Y-01	TCGA-BC-A10S-01A-22D-A12Y-01	TCGA-BC-A10T-01A-11D-A12Y-01	TCGA-BC-A10U-01A-11D-A12Y-01	TCGA-BC-A10W-01A-11D-A12Y-01	TCGA-BC-A10X-01A-11D-A12Y-01	TCGA-BC-A10Y-01A-11D-A12Y-01	TCGA-BC-A10Z-01A-11D-A12Y-01	TCGA-BC-A110-01A-11D-A12Y-01	TCGA-BC-A112-01A-11D-A12Y-01	TCGA-BC-A216-01A-11D-A151-01	TCGA-BC-A217-01A-11D-A151-01	TCGA-BC-A3KF-01A-11D-A20V-01	TCGA-BC-A3KG-01A-11D-A20V-01	TCGA-BD-A2L6-01A-11D-A20V-01	TCGA-BD-A3ER-01A-11D-A20V-01	TCGA-CC-5258-01A-01D-A12Y-01	TCGA-CC-5260-01A-01D-A12Y-01	TCGA-CC-5261-01A-01D-A12Y-01	TCGA-CC-5262-01A-01D-A12Y-01	TCGA-CC-5263-01A-01D-A12Y-01	TCGA-CC-5264-01A-01D-A12Y-01	TCGA-CC-A1HT-01A-11D-A12Y-01	TCGA-CC-A3M9-01A-11D-A20V-01	TCGA-CC-A3MA-01A-11D-A20V-01	TCGA-CC-A3MB-01A-11D-A20V-01	TCGA-DD-A113-01A-11D-A12Y-01	TCGA-DD-A114-01A-11D-A12Y-01	TCGA-DD-A115-01A-11D-A12Y-01	TCGA-DD-A116-01A-11D-A12Y-01	TCGA-DD-A118-01A-11D-A12Y-01	TCGA-DD-A119-01A-11D-A12Y-01	TCGA-DD-A11A-01A-11D-A12Y-01	TCGA-DD-A11B-01A-11D-A12Y-01	TCGA-DD-A11C-01A-11D-A12Y-01	TCGA-DD-A11D-01A-11D-A12Y-01	TCGA-DD-A1E9-01A-21D-A151-01	TCGA-DD-A1EA-01A-11D-A12Y-01	TCGA-DD-A1EB-01A-11D-A12Y-01	TCGA-DD-A1EC-01A-21D-A12Y-01	TCGA-DD-A1ED-01A-11D-A151-01	TCGA-DD-A1EE-01A-11D-A12Y-01	TCGA-DD-A1EF-01A-11D-A12Y-01	TCGA-DD-A1EG-01A-11D-A20V-01	TCGA-DD-A1EH-01A-11D-A12Y-01	TCGA-DD-A1EI-01A-11D-A12Y-01	TCGA-DD-A1EJ-01A-11D-A151-01	TCGA-DD-A1EK-01A-11D-A20V-01	TCGA-DD-A1EL-01A-11D-A151-01	TCGA-DD-A39V-01A-11D-A20V-01	TCGA-DD-A39W-01A-11D-A20V-01	TCGA-DD-A39X-01A-11D-A20V-01	TCGA-DD-A39Y-01A-11D-A20V-01	TCGA-DD-A39Z-01A-11D-A20V-01	TCGA-DD-A3A0-01A-11D-A20V-01	TCGA-DD-A3A1-01A-11D-A20V-01	TCGA-DD-A3A2-01A-11D-A20V-01	TCGA-EP-A12J-01A-11D-A12Y-01	TCGA-EP-A26S-01A-11D-A16U-01	TCGA-EP-A2KA-01A-11D-A182-01	TCGA-EP-A2KB-01A-11D-A182-01	TCGA-EP-A2KC-01A-11D-A20V-01	TCGA-EP-A3JL-01A-11D-A20V-01	TCGA-ES-A2HS-01A-11D-A182-01	TCGA-ES-A2HT-01A-12D-A182-01	TCGA-FV-A23B-01A-11D-A16U-01	TCGA-FV-A2QR-01A-11D-A20V-01	TCGA-G3-A25S-01A-11D-A16U-01	TCGA-G3-A25T-01A-11D-A16U-01	TCGA-G3-A25U-01A-11D-A16U-01	TCGA-G3-A25V-01A-11D-A16U-01	TCGA-G3-A25W-01A-11D-A16U-01	TCGA-G3-A25X-01A-11D-A16U-01	TCGA-G3-A25Y-01A-11D-A16U-01	TCGA-G3-A25Z-01A-11D-A16U-01	TCGA-G3-A3CG-01A-11D-A20V-01	TCGA-G3-A3CI-01A-11D-A20V-01	TCGA-G3-A3CJ-01A-11D-A20V-01	TCGA-G3-A3CK-01A-11D-A20V-01	
Amplification Peak  1	1p22.3  	chr1:85974031-86006008(probes 47284:47295)        	chr1:85980351-85993803(probes 47286:47289)          	chr1:85979933-86006716(probes 47285:47297)          	0.099658	   0.099658		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	1	0	1	2	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	2	0	0	0	0	1	1	1	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	2	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	
Amplification Peak  2	1q22    	chr1:154971163-155045171(probes 70241:70262)    	chr1:155008611-155017925(probes 70252:70255)      	chr1:120527362-207697769(probes 67828:103131)     	1.3055e-08	 1.3055e-08		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	1	0	2	2	2	0	2	1	0	2	1	2	0	2	0	1	1	0	2	1	1	2	1	0	2	1	2	1	2	0	1	2	1	1	1	1	2	2	1	0	0	2	1	1	2	0	1	1	1	2	1	2	1	1	1	1	0	1	1	2	1	2	2	0	2	1	2	1	0	1	0	1	2	2	1	2	0	2	1	
Amplification Peak  3	1q42.3  	chr1:193594795-249250621(probes 94769:129196)   	chr1:235071685-235112702(probes 121270:121304)    	chr1:231582087-249250621(probes 118701:129196)    	0.0059548	    0.10324		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	2	0	1	2	0	0	1	0	0	1	2	1	0	2	1	2	0	0	2	1	2	2	0	1	1	0	2	1	0	0	1	2	1	1	0	1	2	2	0	0	0	2	1	1	2	0	1	1	1	2	1	0	1	1	1	1	0	1	1	1	1	2	2	0	2	1	2	1	0	0	0	1	1	1	1	2	0	2	1	
Amplification Peak  4	2p24.1  	chr2:9349056-27703965(probes 134485:145944)        	chr2:20324096-20336236(probes 142025:142032)        	chr2:20216202-20432786(probes 141958:142105)        	0.035331	   0.035331		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	1	1	0	2	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	1	0	2	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	
Amplification Peak  5	3q26.31 	chr3:172254454-172319444(probes 354113:354143)  	chr3:172270116-172294339(probes 354124:354131)    	chr3:172116636-172367652(probes 354004:354183)    	0.00058644	 0.00058644		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	1	0	2	0	0	0	1	2	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	
Amplification Peak  6	4q31.3  	chr4:154206362-158836019(probes 451336:454163)  	chr4:155475917-155505926(probes 452096:452111)    	chr4:155448784-155533793(probes 452090:452119)    	0.089675	   0.089675		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	
Amplification Peak  7	5p15.33 	chr5:953901-1300024(probes 469786:469821)            	chr5:964251-1020353(probes 469788:469813)              	chr5:1-1308551(probes 469765:469823)                   	0.035331	   0.035331		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	1	0	0	0	1	0	0	2	0	0	1	1	0	1	0	0	1	0	0	0	1	2	1	1	0	1	0	0	1	1	1	0	1	0	0	1	1	1	0	0	0	1	1	0	0	2	0	0	1	1	0	1	2	0	0	1	0	0	0	0	1	1	2	0	1	1	1	1	1	0	0	1	1	0	0	1	0	1	0	
Amplification Peak  8	5q35.3  	chr5:136221300-180915260(probes 543369:570316)  	chr5:178512137-178516482(probes 569401:569405)    	chr5:178512137-178533972(probes 569401:569408)    	0.058808	   0.058808		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	0	1	0	1	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	1	1	1	1	0	0	0	1	1	1	0	0	0	1	0	0	0	0	0	0	0	1	1	1	2	0	0	1	0	0	0	0	1	1	1	0	1	0	0	1	1	0	0	1	2	0	0	1	0	0	0	
Amplification Peak  9	6p25.2  	chr6:1-32870056(probes 570317:589549)              	chr6:2976809-3067787(probes 571825:571903)            	chr6:1-5145735(probes 570317:573266)                  	0.016894	    0.14505		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	0	1	0	0	2	0	0	0	0	0	1	1	1	0	2	1	0	0	0	1	0	1	0	0	0	0	2	0	1	0	0	1	2	1	0	1	0	0	0	0	0	0	1	2	1	2	0	1	0	0	0	0	1	1	1	0	0	0	0	0	1	1	1	0	1	0	0	0	2	0	1	0	0	2	2	0	1	0	0	1	
Amplification Peak 10	6p21.1  	chr6:43768831-43778390(probes 596142:596144)      	chr6:43770151-43777698(probes 596143:596143)        	chr6:43039089-44182757(probes 595792:596375)        	1.185e-07	 1.3282e-06		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	2	2	0	0	2	1	0	0	2	1	1	2	2	0	0	0	1	0	2	0	0	0	0	1	0	1	1	0	1	2	1	0	1	2	0	0	1	0	0	1	1	1	2	0	0	0	0	0	0	1	1	1	0	0	0	0	0	2	1	1	0	2	0	2	0	2	0	1	0	0	2	0	0	1	0	0	1	
Amplification Peak 11	6q12    	chr6:67148820-67995170(probes 606617:607262)      	chr6:67551233-67576136(probes 606906:606942)        	chr6:67551233-67578851(probes 606906:606945)        	0.15211	    0.16776		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	1	0	0	1	0	0	0	0	1	0	0	1	0	1	2	1	0	0	2	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	1	0	0	0	0	2	0	2	1	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	
Amplification Peak 12	7p21.3  	chr7:1-34013580(probes 666850:685609)               	chr7:7786416-7809141(probes 669637:669650)            	chr7:7761046-7920637(probes 669617:669790)            	0.099658	   0.099658		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	1	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	1	1	0	1	1	0	1	0	1	0	2	0	1	1	1	0	1	1	0	1	1	0	0	0	1	0	1	1	0	0	1	1	0	0	1	0	0	2	0	1	1	1	0	0	0	1	1	0	0	0	0	1	0	1	0	2	0	
Amplification Peak 13	7q21.2  	chr7:90450977-92715262(probes 712265:713796)      	chr7:92295511-92299745(probes 713413:713417)        	chr7:88141180-92716001(probes 712007:713798)        	0.0053008	  0.0053008		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	1	1	1	0	0	0	0	1	0	1	0	0	1	1	0	0	1	0	1	0	0	0	0	1	0	0	1	0	0	1	1	2	0	1	0	1	2	0	1	1	1	0	0	2	0	1	0	1	0	2	0	0	1	0	1	0	
Amplification Peak 14	8q24.22 	chr8:122477740-135367259(probes 815529:824663)  	chr8:133832938-133843390(probes 823317:823317)    	chr8:93020819-146364022(probes 798547:829788)      	7.8625e-05	 7.8625e-05		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	2	1	1	2	0	0	0	0	0	0	0	1	0	0	1	2	0	1	1	0	1	1	1	2	1	1	0	0	2	1	2	1	0	1	0	2	0	0	1	0	2	2	2	0	2	0	0	2	2	0	2	2	1	0	1	0	2	0	2	1	2	2	2	2	0	0	0	1	1	1	1	2	0	1	1	0	1	0	
Amplification Peak 15	10p15.1 	chr10:5008384-5043327(probes 900829:900848)        	chr10:5030268-5042663(probes 900843:900847)          	chr10:5009450-5046956(probes 900830:900850)          	0.099658	   0.099658		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	2	2	0	2	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	
Amplification Peak 16	11q13.3 	chr11:69261268-69434302(probes 1015102:1015206)  	chr11:69388908-69434271(probes 1015189:1015205)    	chr11:68696706-70327304(probes 1014777:1015658)    	7.8754e-08	 7.8754e-08		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	2	0	2	0	0	1	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0	2	0	0	0	1	0	0	0	
Amplification Peak 17	12p13.2 	chr12:12435873-12486704(probes 1062334:1062365)  	chr12:12443633-12454986(probes 1062348:1062352)    	chr12:12443633-12460070(probes 1062348:1062355)    	0.24941	    0.24941		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	
Amplification Peak 18	12q13.3 	chr12:1-133851895(probes 1056037:1130013)         	chr12:57402823-57418924(probes 1085356:1085360)    	chr12:57402823-57422933(probes 1085356:1085363)    	0.12586	    0.43128		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	2	0	0	0	2	0	0	0	0	0	1	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 19	12q23.1 	chr12:90785550-133851895(probes 1105356:1130013)	chr12:97332518-97344374(probes 1109708:1109713)    	chr12:97332518-97352776(probes 1109708:1109716)    	0.15972	     0.2083		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	2	0	0	0	1	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	
Amplification Peak 20	13q32.3 	chr13:96213209-104617917(probes 1174609:1180314)	chr13:100680400-100745542(probes 1177366:1177367)	chr13:96213934-104618528(probes 1174610:1180316)  	0.0014838	  0.0014838		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	2	0	0	2	0	0	1	0	2	0	0	0	1	0	1	0	1	0	0	0	1	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	2	0	0	1	1	0	0	0	0	0	0	2	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 21	15q21.3 	chr15:53689045-53797742(probes 1251820:1251908)  	chr15:53716226-53732048(probes 1251847:1251852)    	chr15:53690092-53766905(probes 1251821:1251873)    	0.10324	    0.15972		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	1	0	0	0	0	0	2	0	0	0	1	0	2	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	
Amplification Peak 22	15q26.3 	chr15:51701205-102531392(probes 1250541:1280707)	chr15:100779768-102531392(probes 1280160:1280707)	chr15:100147016-102531392(probes 1280022:1280707)	0.033697	    0.38609		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	2	0	0	0	0	0	0	1	1	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	2	0	0	1	0	0	0	0	1	0	0	0	0	0	
Amplification Peak 23	16q11.2 	chr16:31845698-47608671(probes 1294601:1295006)  	chr16:46708229-46850404(probes 1294655:1294713)    	chr16:46708229-47114320(probes 1294655:1294824)    	0.15211	    0.15211		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 24	17q23.1 	chr17:57648506-58857125(probes 1346749:1347280)  	chr17:58011836-58167484(probes 1346905:1346962)    	chr17:57393467-59154017(probes 1346606:1347426)    	0.0049879	   0.050489		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	1	0	0	0	1	1	0	2	1	0	1	0	2	0	0	0	0	0	1	1	0	1	1	0	0	0	0	0	1	1	0	0	1	1	0	0	0	0	1	1	0	0	0	0	0	0	1	2	0	0	0	0	0	1	0	0	0	0	0	0	2	1	1	0	1	0	2	1	2	1	1	0	1	1	0	1	0	0	1	1	
Amplification Peak 25	17q25.3 	chr17:80079436-80527577(probes 1358171:1358288)  	chr17:80295545-80325643(probes 1358200:1358204)    	chr17:64120133-81195210(probes 1349919:1358525)    	1.1647e-05	 0.00040873		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	1	0	0	2	1	1	0	1	1	0	2	0	2	0	0	0	0	0	1	1	0	1	1	0	0	0	1	0	1	1	1	0	1	1	0	1	0	0	1	2	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	2	2	0	0	0	0	1	1	0	1	0	0	1	2	0	1	0	2	1	0	1	0	0	1	1	
Amplification Peak 26	19q13.11	chr19:33711641-33762256(probes 1414095:1414114)  	chr19:33713870-33750313(probes 1414098:1414110)    	chr19:33711687-33763120(probes 1414096:1414116)    	0.10324	    0.10324		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	1	0	2	0	0	0	2	1	0	1	0	2	0	2	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	1	1	0	0	0	0	1	0	0	1	0	0	1	1	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	2	1	1	1	1	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	
Amplification Peak 27	20q13.2 	chr20:47874006-63025520(probes 1452927:1462473)  	chr20:52523620-52539526(probes 1455809:1455821)    	chr20:52523620-52540605(probes 1455809:1455824)    	0.18314	    0.18314		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	1	1	0	0	0	0	0	1	2	0	0	0	1	1	0	1	0	0	0	1	0	0	1	0	1	0	1	2	0	1	0	1	1	1	1	2	0	0	0	0	0	0	0	1	1	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	1	1	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	
Deletion Peak  1	1p36.32 	chr1:1-48649489(probes 1:24052)                      	chr1:1-3218922(probes 1:1)                            	chr1:1-34785218(probes 1:16582)                      	4.1878e-11	 4.8485e-10		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	1	1	0	1	0	1	0	0	0	0	1	0	0	0	1	0	1	1	1	1	0	0	0	1	1	1	0	0	1	1	1	1	1	1	1	1	0	1	0	0	0	1	1	1	0	1	0	0	0	0	1	0	1	1	1	0	0	0	0	1	1	0	1	0	1	1	1	0	0	1	1	1	1	0	0	0	0	0	
Deletion Peak  2	1p35.2  	chr1:1-48465382(probes 1:23911)                      	chr1:31647935-31713851(probes 14910:14948)          	chr1:1-34785218(probes 1:16582)                      	0.00010901	    0.20048		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	1	1	0	1	0	0	0	0	1	0	0	0	0	0	1	1	1	1	0	0	0	0	0	1	1	1	0	0	1	1	1	1	1	0	0	1	0	0	0	0	0	0	1	1	0	1	0	0	1	0	1	0	0	0	1	0	0	0	0	1	1	0	1	0	1	0	1	0	0	0	1	0	1	0	0	0	0	0	
Deletion Peak  3	2p15    	chr2:1-243199373(probes 129197:260550)               	chr2:63813459-63838260(probes 166081:166089)        	chr2:63809747-63911153(probes 166078:166127)        	0.22938	    0.23682		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  4	2q22.1  	chr2:139655617-143637838(probes 201408:203837)    	chr2:140976294-142894275(probes 202130:203400)    	chr2:142042799-142047443(probes 202766:202767)    	0.019568	   0.082089		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  5	2q23.1  	chr2:136870324-166062106(probes 199978:216504)    	chr2:148775624-149272575(probes 206572:206787)    	chr2:148631536-149151357(probes 206517:206733)    	0.021412	    0.22062		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	
Deletion Peak  6	2q37.3  	chr2:207636660-243199373(probes 239477:260550)    	chr2:242253996-242298809(probes 260428:260444)    	chr2:237653540-243199373(probes 257756:260550)    	0.044235	    0.18016		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	1	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  7	3p13    	chr3:17195937-93784545(probes 269767:311502)        	chr3:70999879-71635142(probes 301223:301608)        	chr3:71136682-71145428(probes 301318:301319)        	0.1833	    0.18016		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	1	0	0	0	1	1	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	
Deletion Peak  8	4q24    	chr4:77232044-115601010(probes 408648:430613)      	chr4:104509758-104641919(probes 424234:424296)    	chr4:76511747-115889391(probes 408200:430764)      	0.00051487	   0.014118		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	1	1	0	0	1	1	0	1	0	1	1	0	0	0	1	0	1	0	1	1	0	1	0	1	1	1	0	1	0	1	1	1	1	0	0	0	1	0	0	0	0	1	1	1	1	0	1	0	0	1	1	0	1	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	1	1	1	0	0	0	0	
Deletion Peak  9	4q35.1  	chr4:176920228-191154276(probes 463973:469764)    	chr4:185509761-185721423(probes 468218:468249)    	chr4:164509165-191154276(probes 457421:469764)    	6.2475e-08	 1.0642e-06		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	0	1	0	1	0	0	1	0	1	0	1	1	1	0	0	1	0	1	0	0	1	1	1	1	1	1	1	0	1	0	1	1	1	0	0	0	0	0	0	0	0	0	1	1	1	1	0	1	0	1	1	1	0	1	0	1	0	0	0	1	1	0	0	0	0	1	1	0	0	0	0	1	1	1	0	0	0	0	
Deletion Peak 10	6q16.3  	chr6:72593884-125149024(probes 609810:639199)      	chr6:101844516-102521593(probes 625986:626405)    	chr6:102179838-102186783(probes 626196:626197)    	0.058402	    0.13487		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	1	0	1	1	1	0	1	1	1	0	1	0	1	0	0	1	0	1	1	1	1	1	1	1	0	0	0	1	0	1	0	1	0	1	0	0	0	0	0	1	0	1	1	1	1	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 11	6q26    	chr6:126802823-171115067(probes 640229:666849)    	chr6:163833536-164001491(probes 663589:663671)    	chr6:163832492-164159742(probes 663588:663774)    	0.049474	   0.095221		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	1	0	1	1	1	0	1	1	1	0	1	1	1	0	1	0	1	0	0	0	0	1	0	1	1	1	1	1	0	0	0	1	0	1	1	1	0	1	0	0	0	0	0	1	0	1	1	1	1	0	0	0	1	1	0	0	0	0	0	
Deletion Peak 12	8p23.2  	chr8:1953486-6262191(probes 748871:750801)            	chr8:2784419-4854274(probes 748997:750422)            	chr8:1-9189970(probes 748210:751910)                   	3.1932e-05	 3.1932e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	1	1	1	1	0	0	0	0	0	1	1	1	1	1	0	0	1	0	1	1	1	0	1	1	0	0	1	0	1	1	1	1	0	0	1	0	1	0	0	0	0	1	1	1	0	1	1	1	1	1	0	1	1	1	1	0	0	1	1	1	0	1	1	1	1	0	1	1	0	0	1	1	1	1	0	1	0	1	0	
Deletion Peak 13	9p21.3  	chr9:21410163-26068229(probes 842953:845815)        	chr9:21959052-21997722(probes 843281:843294)        	chr9:21620607-24087240(probes 843110:844681)        	0.013742	   0.014118		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	1	0	1	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	1	0	1	1	0	1	1	0	1	1	0	1	1	1	1	0	0	0	0	0	0	0	0	1	0	1	1	0	1	0	0	1	0	0	1	0	0	0	0	1	1	1	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	1	0	
Deletion Peak 14	10p15.3 	chr10:1-7746594(probes 897845:902833)                 	chr10:1-742144(probes 897845:897932)                   	chr10:467406-484158(probes 897883:897891)              	0.15506	    0.15474		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 15	10q23.31	chr10:89604733-90034038(probes 950045:950480)      	chr10:89617402-89735596(probes 950052:950239)      	chr10:88474625-94063222(probes 949622:952998)      	4.2453e-06	 4.9315e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	1	0	0	0	1	0	1	0	0	0	1	1	0	1	1	0	0	1	0	0	1	1	1	0	1	1	0	1	1	0	1	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	1	0	0	0	0	0	0	
Deletion Peak 16	10q26.13	chr10:77160683-135534747(probes 941908:978749)    	chr10:123501958-123690148(probes 971811:971920)  	chr10:110403376-135534747(probes 962645:978749)  	0.0027295	    0.12017		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	1	0	0	0	1	0	1	0	0	1	0	1	0	1	0	0	0	1	0	0	0	1	1	1	1	0	0	1	1	0	0	0	1	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	1	1	0	0	0	0	0	
Deletion Peak 17	11q14.1 	chr11:77811864-102719729(probes 1019575:1035204)  	chr11:83165646-85348794(probes 1023162:1024340)    	chr11:84185248-84189168(probes 1023752:1023753)    	0.091209	   0.088525		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	0	1	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	1	1	0	1	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 18	12p12.1 	chr12:1-68058246(probes 1056037:1091825)             	chr12:23674573-24103478(probes 1069240:1069549)    	chr12:23865212-23869082(probes 1069395:1069396)    	0.1416	    0.13487		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	1	0	0	1	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	
Deletion Peak 19	12q24.33	chr12:109528819-133851895(probes 1117644:1130013)	chr12:129276642-131078424(probes 1128729:1129147)	chr12:120680830-133851895(probes 1124270:1130013)	0.0080999	  0.0081101		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	1	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	
Deletion Peak 20	13q14.2 	chr13:48833767-49281290(probes 1148608:1149014)    	chr13:48875753-49060837(probes 1148631:1148857)    	chr13:35079118-92268054(probes 1139700:1171907)    	4.675e-08	 4.5598e-08		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	1	0	1	0	1	0	1	1	0	1	0	1	1	1	0	0	1	1	1	1	1	1	1	1	1	0	1	1	1	1	1	0	1	0	1	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	1	0	0	0	0	0	
Deletion Peak 21	14q23.3 	chr14:37121924-90515109(probes 1195706:1226946)    	chr14:66970921-67652098(probes 1212463:1212673)    	chr14:67346354-67581075(probes 1212561:1212642)    	0.067778	   0.068575		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	0	0	0	0	0	0	0	1	0	1	1	0	1	1	0	0	1	1	1	0	0	1	1	0	1	1	1	0	1	0	1	0	1	0	1	0	1	0	0	0	0	0	0	1	0	1	1	0	1	0	0	1	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 22	15q21.1 	chr15:1-57219891(probes 1236159:1254046)           	chr15:48694212-48939180(probes 1248736:1248921)    	chr15:48821049-48824014(probes 1248829:1248830)    	0.17341	    0.16633		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	1	0	0	1	0	1	1	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	
Deletion Peak 23	16q23.1 	chr16:59786347-90354753(probes 1303299:1321522)    	chr16:77819475-78015441(probes 1313680:1313882)    	chr16:77874858-77979107(probes 1313737:1313844)    	0.022201	   0.022201		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	1	1	0	0	1	1	1	1	0	0	1	1	0	1	0	0	1	1	1	0	1	1	0	1	1	1	1	1	0	1	0	0	1	1	0	0	0	0	0	0	0	0	1	0	1	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	1	0	1	0	1	0	0	1	1	1	0	0	0	0	
Deletion Peak 24	17p12   	chr17:15891757-16121163(probes 1329088:1329184)    	chr17:15892442-15936104(probes 1329089:1329106)    	chr17:15557741-16032764(probes 1328992:1329147)    	0.0070653	   0.006758		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	1	0	1	1	0	0	1	1	1	1	0	1	1	1	1	0	1	0	1	1	1	0	1	0	1	1	0	1	1	1	1	1	0	0	1	1	0	1	1	0	0	0	0	1	0	1	1	1	1	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	1	1	1	0	1	1	1	0	1	1	1	0	0	0	
Deletion Peak 25	19p13.3 	chr19:1-59128983(probes 1401212:1425172)             	chr19:3352449-3481613(probes 1401935:1401968)        	chr19:3412058-3418988(probes 1401952:1401953)        	0.10016	    0.10644		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	1	0	1	0	0	0	1	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	
Deletion Peak 26	22q13.31	chr22:42474454-51304566(probes 1495301:1500002)    	chr22:47006513-47078527(probes 1498162:1498188)    	chr22:42498950-51304566(probes 1495313:1500002)    	0.0052457	  0.0052217		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	1	0	0	0	1	0	0	0	1	1	1	1	0	0	0	1	0	0	0	1	1	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	1	0	
Amplification Peak  1 - CN values	1p22.3  	chr1:85974031-86006008(probes 47284:47295)        	chr1:85980351-85993803(probes 47286:47289)          	chr1:85979933-86006716(probes 47285:47297)          	0.099658	   0.099658		Actual Copy Change Given	-0.0076101	-0.5427	0.37314	0.057136	0.43868	-0.0061656	0.21965	1.6684	0.03314	0.043582	0.0022193	0.0078436	0.023987	0.74187	0.86368	-0.018678	0.018383	0.0037465	-0.015466	-0.27953	-0.0098185	0.49209	-0.00035434	1.4162	0.0069435	0.029847	0.086233	0.020063	0.53239	0.34762	0.1014	0.027494	0.0090312	-0.42691	0.60142	0.14422	0.042123	0.39463	-0.0072659	-0.20473	-0.0057875	-0.017941	0.001803	0.00055459	-0.005814	0.033127	-0.11835	0.25137	-0.058596	0.24271	0.0029133	0.00069327	-0.0081624	-0.0017202	0.96925	0.83949	-0.0015243	0.00458	0.65958	0.001803	-0.0016918	-0.0031345	0.015028	0.39131	-0.33556	-0.044944	-0.38213	0	0.0072217	-0.0091286	0.62531	0	0.016565	0.0052368	0.39811	-0.15924	-0.65864	-0.0087889	-0.012024	0.0019418	0.00055459	0.50449	
Amplification Peak  2 - CN values	1q22    	chr1:154971163-155045171(probes 70241:70262)    	chr1:155008611-155017925(probes 70252:70255)      	chr1:120527362-207697769(probes 67828:103131)     	1.3055e-08	 1.3055e-08		Actual Copy Change Given	-0.0076101	0.0058309	0.37314	0.74746	0.035383	2.2184	0.91953	3.2562	0.066372	0.98307	0.87189	0.0078436	3.6569	0.74347	1.114	0.0375	1.4333	0.001288	0.53415	0.62024	0.0093098	1.2791	0.3552	0.56863	0.98701	0.76767	0.086233	1.3297	0.77483	1.1615	0.51996	1.5662	0.00083195	0.33455	1.0864	0.78244	0.78827	0.66327	0.69895	1.0113	1.295	0.74005	0.001803	0.00055459	1.503	0.59908	0.85264	1.3874	-0.058596	0.24271	0.66567	0.42035	1.2746	0.79553	1.7407	0.82634	0.64268	0.63609	0.65958	0.001803	0.79622	0.81613	1.9296	0.77868	0.90057	1.2515	-0.013815	1.3739	0.77791	2.0575	0.57093	0	0.81571	0.0052368	0.81591	1.4967	1.0727	0.55777	0.99488	0.0019418	1.3115	0.50449	
Amplification Peak  3 - CN values	1q42.3  	chr1:193594795-249250621(probes 94769:129196)   	chr1:235071685-235112702(probes 121270:121304)    	chr1:231582087-249250621(probes 118701:129196)    	0.0059548	    0.10324		Actual Copy Change Given	-0.0076101	0.0063871	0.37397	1.1885	0.023286	0.61607	0.93797	-0.66531	0.063505	0.12035	0.0062481	0.046417	0.68794	1.4786	0.25475	0.036228	3.6569	0.78852	0.95509	-0.22034	0.013772	1.3169	0.36723	1.5468	0.97757	-0.059696	0.17739	0.67771	0.07096	1.0485	0.51996	-0.015466	0.0090312	0.4375	1.1359	0.3194	0.78827	0	0.69895	0.97466	1.3095	-0.027124	0.001803	0.00055459	1.503	0.59908	0.85264	1.4091	-0.058596	0.24271	0.72036	0.65608	1.2746	0.79553	0.024337	0.82823	0.64268	0.5738	0.65774	-0.0033697	0.80903	0.82497	0.49078	0.81016	0.9175	1.2515	-0.013815	1.3713	0.78736	1.4131	0.84689	0	-0.90087	0.0052368	0.40111	0.42355	0.19725	0.55777	1.0159	0.0019418	1.3212	0.5055	
Amplification Peak  4 - CN values	2p24.1  	chr2:9349056-27703965(probes 134485:145944)        	chr2:20324096-20336236(probes 142025:142032)        	chr2:20216202-20432786(probes 141958:142105)        	0.035331	   0.035331		Actual Copy Change Given	0.45905	0.0095883	0.30378	0.34876	0.00027728	1.0382	0.0082437	-0.0038651	-0.00041585	1.3692	-0.0044312	0.0044411	1.3265	0.013772	0.0027311	0.051814	0.019783	-0.0069195	0.04883	-0.00097017	0.00055459	0.020839	-0.0051227	0.72924	0.73853	0	0.36592	0.0075	0	0.23892	-0.047395	1.4637	-0.017941	-0.006505	-0.048925	0.86305	-0.0051649	-0.40163	-0.0040433	0.50516	0.00083195	0.029184	0	0.001803	0.0041632	0.047978	0.13155	0.023706	0	0.11624	-0.011749	0.68794	0.00013863	-0.019693	0.1167	-0.081188	-0.0051227	0.015866	-0.00027724	0	0	0	0.89527	-0.0029091	-0.68064	-0.016429	0.32125	0.0086135	-0.021784	0.013632	-0.2081	0.31787	-0.0038779	-0.00097017	0.36756	0.057511	0.023847	0.43994	-0.011618	-0.00041585	-0.0037395	0.0055529	
Amplification Peak  5 - CN values	3q26.31 	chr3:172254454-172319444(probes 354113:354143)  	chr3:172270116-172294339(probes 354124:354131)    	chr3:172116636-172367652(probes 354004:354183)    	0.00058644	 0.00058644		Actual Copy Change Given	0	0.00027728	-0.0024302	0.37759	-0.0060904	2.8733	-0.0032768	-0.012976	-0.0063668	0.88546	0.90734	-0.017479	-0.34285	-0.011611	1.1485	0.056798	0.79297	0.003191	-0.012576	-0.012162	0.04344	0.025341	0	0.048546	0.020343	0.032522	0.010842	0.76159	0.015727	-0.35474	0.10672	0.88226	0.013632	-0.42615	0.05153	-0.31622	-0.0075141	1.6971	-0.024798	-0.18923	-0.0092333	-0.0033243	-0.010922	0.0029133	0	0.47187	0	-0.091552	0.067817	0.4392	-0.116	0.10162	-0.025893	-0.0012137	0.013632	0.43361	0	0.0075	-0.0076101	-0.0033674	-0.00086054	-0.0082492	3.3547	0	-0.025683	-0.048478	0.34502	-0.026441	0.0030522	0.04954	0.032547	-0.0042929	0.057052	-0.00055444	-0.010646	0.51856	0.0090312	0.04209	-0.028218	0	-0.013127	-0.0016629	
Amplification Peak  6 - CN values	4q31.3  	chr4:154206362-158836019(probes 451336:454163)  	chr4:155475917-155505926(probes 452096:452111)    	chr4:155448784-155533793(probes 452090:452119)    	0.089675	   0.089675		Actual Copy Change Given	-0.069795	0.56774	0.0069435	0.62006	-0.012333	-0.62808	-0.0079769	-0.037525	-0.0040157	0.89909	0.0051359	0	0.042024	-0.021784	-0.26748	-0.69884	-0.43572	-0.0059522	-0.015466	-0.68615	-0.020549	-0.33184	-0.0062286	0.0070826	-0.58544	-0.043234	-0.10092	-0.014503	-0.49381	-0.41212	-0.21664	0.86712	-0.68697	0.0091705	-0.22625	-0.78112	-0.83731	0.022865	-0.0273	-0.028901	-0.008221	-0.015054	0.39861	-0.00097017	0.006109	-0.087579	-0.38705	-0.62598	-0.38134	-0.14437	0.010842	-0.76227	-0.018216	0.00072692	-0.21676	-0.13199	-0.0056757	-0.64593	-0.011611	-0.0066432	0.0063581	-0.0090061	1.0151	-0.56952	-0.20792	-0.051856	0	-0.036265	-0.014916	-0.79603	-0.70855	-0.00027724	-0.0019399	-0.019589	-0.021235	3.6569	-0.602	-0.73271	0.25137	0.00597	-0.0123	-0.0012473	
Amplification Peak  7 - CN values	5p15.33 	chr5:953901-1300024(probes 469786:469821)            	chr5:964251-1020353(probes 469788:469813)              	chr5:1-1308551(probes 469765:469823)                   	0.035331	   0.035331		Actual Copy Change Given	-0.0042929	0.0072217	0.37561	0.48578	-0.075078	0.0081959	-0.0063193	0.42437	-0.0019399	0.019783	1.8429	0.003191	0.098124	0.7783	0.23777	0.063366	0.41513	-0.0044795	0.026795	0.50255	0.030451	0.014406	-0.0063668	0.73341	1.818	0.31927	0.86433	0.0027745	0.34453	0.075128	-0.027671	0.44308	0.49476	0.40994	0.059366	0.21169	0.044672	0.02539	0.68924	0.56934	0.67511	-0.019589	-0.01354	0.0013868	0.14622	0.34275	0.0015255	-0.25092	1.9992	-0.16509	0.0090312	0.82157	0.64732	-0.0046743	0.17754	0.99281	-0.010094	0.023847	0.65848	0.010564	-0.0050133	0.0011608	-0.0067813	0.37019	0.21781	1.4827	-0.3511	0.46605	0.79529	0.8087	0.39743	0.25386	-0.0026322	0.0044411	0.39297	0.63518	-0.0095426	-0.044353	0.40511	0.001803	0.71528	-0.0029853	
Amplification Peak  8 - CN values	5q35.3  	chr5:136221300-180915260(probes 543369:570316)  	chr5:178512137-178516482(probes 569401:569405)    	chr5:178512137-178533972(probes 569401:569408)    	0.058808	   0.058808		Actual Copy Change Given	-0.0042929	0.0019418	0.36887	-0.49016	-0.11024	0.61643	-0.018306	0.48821	-0.0019399	-0.021784	-0.017666	0.003191	0.33885	1.2423	0.087489	-0.031905	0	0.0012481	0.0093098	-0.089699	0.026514	0.014406	-0.0063668	0.58991	-0.6069	0.10799	-0.15029	0	0.17498	0.072253	-0.036878	0.31514	0.4669	0.37644	0.83	-0.77145	-0.00077294	0.004719	0.68924	0.59908	0.69316	0.02511	-0.01354	0.0013868	0.14622	-0.13807	0.0016642	-0.25092	0.072651	-0.13561	0.0027745	-0.041024	0.64928	0.80913	0.17468	1.0502	-0.010094	-0.00055444	0.66161	-0.0080244	0.003162	-0.0076969	-0.046583	0.3651	0.21781	0.18828	-0.3511	0.45734	0.0039547	0.0029133	0.52217	0.25386	-0.0026322	0.0044411	0.39197	3.3251	-0.0096806	0.0025753	0.36658	0.0011403	-0.007472	0.00083195	
Amplification Peak  9 - CN values	6p25.2  	chr6:1-32870056(probes 570317:589549)              	chr6:2976809-3067787(probes 571825:571903)            	chr6:1-5145735(probes 570317:573266)                  	0.016894	    0.14505		Actual Copy Change Given	-0.0053992	0.54189	-0.01354	0.81708	0.021183	-0.015741	1.5197	-0.012609	0.0467	-0.010922	-0.006505	0.0058309	0.74918	0.71848	0.69329	-0.018841	1.1443	0.73454	-0.0018014	0	-0.00041585	0.67633	0.0070826	0.50116	-0.051721	0.013033	-0.18011	-0.0096806	0.93	0.010703	0.28961	0.016286	-0.006505	0.42688	0.92594	0.22661	-0.00073528	0.72338	0.067518	-0.18584	-0.0085766	-0.013127	-0.0020784	-0.023703	0.73815	1.4596	0.68198	1.4098	-0.16955	0.5594	-0.0033243	0	-0.016429	-0.0023217	0.2664	0.47598	0.67382	0.0086135	0.0097276	-0.0026322	0.0063581	-0.0081112	0.44986	0.36904	0.62139	-0.042245	0.35365	-0.025483	0.0083351	0	1.247	-0.0037395	0.13391	0	-0.010094	1.0201	1.0621	-0.014027	0.44291	0.00041593	-0.0051227	0.11228	
Amplification Peak 10 - CN values	6p21.1  	chr6:43768831-43778390(probes 596142:596144)      	chr6:43770151-43777698(probes 596143:596143)        	chr6:43039089-44182757(probes 595792:596375)        	1.185e-07	 1.3282e-06		Actual Copy Change Given	-0.0053992	-0.00055444	-0.0045914	-0.038578	0.021183	0.99281	1.4415	-0.012609	0.037623	2.6528	0.89126	0.034113	0.03214	3.2205	0.14784	0.67159	2.0497	1.4259	-0.0018014	0	0.0063871	0.67318	-0.0023227	1.3164	-0.051721	0.013033	-0.14759	-0.0096806	0.47512	0.0095883	0.2958	0.33302	-0.006505	0.40127	0.92452	0.72159	-0.00073528	0.35561	2.3023	-0.17891	-0.0085766	0.72357	-0.0020784	-0.023703	0.73815	0.53995	0.68198	1.4304	-0.16955	-0.15412	0.0093098	0	-0.016429	-0.0023217	0.2664	0.43842	0.67382	-0.015054	0.0097276	-0.0026322	0.0063581	-0.0081112	1.6155	0.36904	0.59585	-0.048971	2.1957	-0.025483	1.3408	0	1.2542	-0.0037395	0.10969	0	-0.010094	1.0026	-0.0011087	-0.014027	0.44291	0.00041593	-0.015329	0.11228	
Amplification Peak 11 - CN values	6q12    	chr6:67148820-67995170(probes 606617:607262)      	chr6:67551233-67576136(probes 606906:606942)        	chr6:67551233-67578851(probes 606906:606945)        	0.15211	    0.16776		Actual Copy Change Given	-0.0053992	0.00083195	0.0016642	0.014888	-0.0037395	0.0054139	-0.016244	-0.012609	0.020483	0.063795	-0.0045695	0.0016642	0.03214	-0.012162	0.14618	0.67159	0.36821	0.74309	-0.010232	0	0.44206	0.018754	-0.082717	0.52923	-0.57802	0.013033	-0.27703	-0.0096806	0.56152	0.013213	-0.22773	0.10687	-0.006505	0.54506	0.92452	0.57202	-0.00073528	-0.39608	2.7949	-0.20087	-0.0085766	-0.0027707	-0.038306	-0.023703	-0.81252	0.53995	-0.31459	1.4304	-0.16955	-0.15796	0.021043	0	-0.016429	-0.0023217	-0.26119	0.43842	-0.77998	0.026935	-0.0033243	-0.0026322	1.5845	-0.0081112	1.0891	0.36904	0.4733	-0.048971	0.35806	-0.025483	-0.82484	-0.80766	-0.72933	-0.39941	0.10969	0	-0.010094	-0.40668	-0.0011087	-0.014027	-0.097232	0.00041593	-0.015329	0.11228	
Amplification Peak 12 - CN values	7p21.3  	chr7:1-34013580(probes 666850:685609)               	chr7:7786416-7809141(probes 669637:669650)            	chr7:7761046-7920637(probes 669617:669790)            	0.099658	   0.099658		Actual Copy Change Given	0.55213	0.0054139	0.73057	0.43564	0.0098669	-0.0083005	0.78685	0.011552	0.031577	0.025531	-0.0047079	0.072827	0.02756	0.0070826	0.14588	0.034959	0.015866	-0.0008316	-0.0049844	-0.62703	0.57113	-0.32559	0.0013868	0.039902	0.8507	0.35524	0.15636	0.010703	0.48066	0.41128	-0.0091286	0.841	0.024127	0.47084	-0.054016	1.3039	0.012473	0.7429	0.69839	0.28881	-0.0041546	0.73057	0.81709	0.00055459	0.7215	0.40361	0.055515	0.09856	0.086522	0.25122	0.017684	0.77887	0.65866	-0.0042593	-0.20224	0.45694	0.73549	0.021183	-0.0060904	0.70195	0.011789	-0.00091872	1.078	-0.3904	0.53473	0.52013	0.34697	0.099579	0.0036076	0.0055529	0.34206	0.35741	0	0.016565	-0.012576	0.085654	0.67864	0.07505	0.54864	0.00013863	1.3475	0.058734	
Amplification Peak 13 - CN values	7q21.2  	chr7:90450977-92715262(probes 712265:713796)      	chr7:92295511-92299745(probes 713413:713417)        	chr7:88141180-92716001(probes 712007:713798)        	0.0053008	  0.0053008		Actual Copy Change Given	3.6569	0.0043021	0.75509	0.41999	0.0098669	0.00083195	0.78093	-0.010909	0.031577	-0.86295	0.0038854	0.072827	0.02756	-0.011611	-0.81082	0.034959	-0.87494	0.00089201	0.038913	0.0019946	0.57113	-0.33738	0.019046	0.056655	1.09	0.0024567	0.16715	0.71415	0.46109	-0.0099956	-0.0091286	0.0069435	0.033127	0.47084	-0.051637	0.64849	-0.0069616	-0.0036855	0.68775	0.25527	-0.0041546	-0.010508	0.81709	0.00055459	0.71208	-0.13135	0.055515	0.09856	0.080745	0.25122	0.0072217	-0.73854	0.65866	-0.0016978	-0.19275	0.45694	0.73549	1.1705	-0.0060904	0.6926	0.0099772	0.83734	1.0186	-0.3904	0.53473	0.52013	0.35661	0.099579	0.0036076	1.5057	-0.30714	0.34783	0	0.11111	-0.012576	3.6569	0.011818	0.07505	0.5493	0.00013863	0.68759	0.058734	
Amplification Peak 14 - CN values	8q24.22 	chr8:122477740-135367259(probes 815529:824663)  	chr8:133832938-133843390(probes 823317:823317)    	chr8:93020819-146364022(probes 798547:829788)      	7.8625e-05	 7.8625e-05		Actual Copy Change Given	0.053379	0.036088	0	0.014159	2.1202	0.58811	0.78279	1.8072	0.026654	-0.039529	-0.0088526	0.0066653	0.035383	-0.011335	-0.76289	0.52785	-0.90183	-0.0094046	0.5935	1.7034	-0.021098	0.32552	0.40844	-0.011515	0.65853	0.52398	0.27822	2.1253	0.67623	0.57505	0	-0.038578	1.2924	0.42019	2.5077	0.61122	0	0.5763	-0.013264	1.9584	-0.012162	-0.00027724	0.41814	-0.0087146	1.3417	1.0258	1.4083	0.028481	2.4747	0.075855	0.0084743	0.99738	1.8642	0.0037802	1.8251	2.8264	0.66882	0.0072217	0.64231	-0.001719	1.557	0.001577	1.1466	0.3628	1.798	2.1451	1.4035	0.94568	-0.012851	0.0073609	0.078566	0.67882	0.82627	0.14607	0.38882	3.5144	0.0016642	0.46955	0.51839	-0.42626	0.69559	0.031718	
Amplification Peak 15 - CN values	10p15.1 	chr10:5008384-5043327(probes 900829:900848)        	chr10:5030268-5042663(probes 900843:900847)          	chr10:5009450-5046956(probes 900830:900850)          	0.099658	   0.099658		Actual Copy Change Given	-0.0013858	0.0038854	1.0992	2.029	0.021373	1.5544	0.013819	-0.71737	0.0322	-0.011293	-0.011887	0.0062481	-0.34171	0.010006	0.21586	0	0.011539	0.00013863	0.53538	0.0072217	0.037782	-0.091943	0.0012481	-0.028355	0.81103	-0.34036	-0.14541	0.7072	1.3275	0.31578	0.19558	0.0055529	0.020839	-0.0083005	-0.055903	-1.002	0.01974	-0.38089	0.0047419	0	0.0015255	0.0022193	-0.0063668	-0.00027724	-0.0013858	0.10672	-0.048797	0.058224	0.069095	-0.0069112	0.98245	1.4573	0	0.0051204	0.0097276	-0.70953	0.0020805	0.00055459	0.0077783	0.0013868	0.009226	0.0057435	0.54189	0.69989	0.0074091	0.054821	0.38122	-0.0012473	0.0097276	-0.00069303	0.034521	-0.0033243	0.014507	0.024829	0	2.4636	0.046417	-0.018015	-0.0094046	-0.0044312	-0.0047079	0.0029133	
Amplification Peak 16 - CN values	11q13.3 	chr11:69261268-69434302(probes 1015102:1015206)  	chr11:69388908-69434271(probes 1015189:1015205)    	chr11:68696706-70327304(probes 1014777:1015658)    	7.8754e-08	 7.8754e-08		Actual Copy Change Given	-0.013677	0.53309	-0.39664	-0.049289	-0.27021	0.62661	0.067138	-0.002534	0	-0.044258	-0.036401	-0.00055444	-0.34194	-0.012851	-0.40111	-0.020687	0.097833	-0.0083005	0.50602	0.014749	0	-0.0086394	0.00097064	-0.081118	3.6569	-0.045807	3.6569	-0.029857	3.6569	-0.39419	0.01419	0.34258	-0.058866	-0.0028302	0.1496	0.16224	0.0018994	-0.0077482	-0.0030475	-0.18433	-0.0016629	0.80655	-0.0051227	-0.0026239	-0.0083005	-0.069332	0.023145	0	0.070449	-0.14463	-0.0049844	-0.054016	-0.012576	-0.00059753	-0.24618	0.47084	-0.0023553	0.53766	0.016006	-0.0027707	-0.004547	0.0026872	1.6894	-0.0078863	-0.13492	-0.041702	-0.036493	0.0013868	-0.010784	-0.012404	2.6741	-0.0094046	-0.006505	0.0015255	3.6569	-0.022964	0.027357	-0.01499	0.51159	-0.0027707	0.02539	-0.0045695	
Amplification Peak 17 - CN values	12p13.2 	chr12:12435873-12486704(probes 1062334:1062365)  	chr12:12443633-12454986(probes 1062348:1062352)    	chr12:12443633-12460070(probes 1062348:1062355)    	0.24941	    0.24941		Actual Copy Change Given	-0.00097017	0.0029133	-0.011198	-0.0096806	0.0094491	3.6569	-0.014731	0.017557	-0.0008316	-0.86617	-0.029448	-0.0047079	0.0077783	1.0382	-0.84093	-0.70997	-0.0038779	-0.79828	0.00069327	0.031859	-0.034631	-0.0046325	-0.0024938	-0.00013862	0.43598	-0.12256	-0.0017355	0.017684	0.0016642	0	0.042024	0.017264	-0.014364	0	-0.22724	-0.80546	-0.0090193	1.6223	0.013074	-0.010707	-0.0020784	-0.0060904	0.0083351	-0.0037395	0.0023581	0.17468	-0.27405	-0.15067	0.078871	-0.58607	0.0015255	-0.26841	-0.0047079	-0.00074396	-0.24423	-0.68833	-0.013815	0.0044411	-0.70298	0.001803	0.0035786	-0.0065247	-0.054599	0.074265	-0.29634	0.27852	-0.025072	-0.0080244	-0.84179	-0.0069195	-0.38539	0.33351	-0.0048461	-0.0076881	-0.005261	0.13347	-0.0011087	-0.74808	-0.015191	-0.013953	-0.0044312	-0.0034627	
Amplification Peak 18 - CN values	12q13.3 	chr12:1-133851895(probes 1056037:1130013)         	chr12:57402823-57418924(probes 1085356:1085360)    	chr12:57402823-57422933(probes 1085356:1085363)    	0.12586	    0.43128		Actual Copy Change Given	-0.0042929	-0.0033243	-0.011198	-0.069198	-0.0071032	1.1766	-0.02241	0	-0.0008316	1.2923	-0.011887	-0.0047079	0.0066765	-0.021235	-0.35889	0.53731	-0.019177	0.94201	0.00069327	0.012455	0.010146	0	-0.0024938	0.012516	0.43598	-0.12256	-0.0017355	-0.75806	0.0016642	0	0.042024	1.0565	-0.010922	0	-0.22724	0.090598	-0.0090193	0.00041593	-0.013242	-0.010707	-0.0020784	-0.0044312	0.0084743	-0.0037395	0.0023581	1.3919	-0.27405	-0.15067	0.072749	0.10907	-0.04726	-0.26841	-0.0047079	-0.0044692	-0.24423	-0.094724	-0.013815	-0.0038779	0.015308	0.001803	0.0035786	-0.0065247	0.9363	0.074265	-0.29634	0.27606	-0.027792	-0.0080244	-0.0008316	0.00083195	0.010196	0.33351	-0.0048461	-0.0076881	-0.0040162	0.084787	-0.0011087	0.02307	-0.015329	-0.013953	-0.0044312	-0.0034627	
Amplification Peak 19 - CN values	12q23.1 	chr12:90785550-133851895(probes 1105356:1130013)	chr12:97332518-97344374(probes 1109708:1109713)    	chr12:97332518-97352776(probes 1109708:1109716)    	0.15972	     0.2083		Actual Copy Change Given	-0.0042929	0.0012481	-0.011198	-0.054014	-0.0017652	0.60738	-0.02241	0	-0.0008316	-0.0019399	0.0034687	-0.0047079	0.0066765	-0.0008316	-0.32196	0.61498	-0.0091286	0.060508	0.00069327	0.012455	-0.0094046	0	-0.0024938	-0.75435	0.43598	-0.11447	-0.11312	-0.76501	0.0016642	0	0.045566	0.021183	-0.010922	0	0.53804	0.11104	0.0039819	0.008892	-0.013242	-0.010707	0.00069327	-0.0044312	0	-0.0037395	-0.0019984	0.16175	-0.2547	-0.15067	0.072749	0.10907	0.00097064	1.0214	-0.0047079	-0.0044692	-0.24423	0.51333	-0.013815	-0.027945	0.65314	-0.00041585	-0.0024029	-0.0065247	0.45326	0.074265	-0.29634	0.27606	-0.037005	-0.0080244	-0.0008316	-0.0043518	0.010196	0.33351	-0.0048461	-0.0076881	-0.0040162	3.1619	0.012677	0.02307	-0.015329	-0.00027724	-0.0044312	-0.0034627	
Amplification Peak 20 - CN values	13q32.3 	chr13:96213209-104617917(probes 1174609:1180314)	chr13:100680400-100745542(probes 1177366:1177367)	chr13:96213934-104618528(probes 1174610:1180316)  	0.0014838	  0.0014838		Actual Copy Change Given	-0.00097017	-0.0051227	-0.39842	-0.45297	0	-0.68149	-0.033358	3.3096	0.013288	0.012516	1.057	-0.055229	-0.029175	0.8481	-0.82556	2.3154	-0.39419	-0.0060904	-0.013127	0.30132	-0.55046	0.8984	-0.37459	0.64337	-0.59468	0.045808	-0.14425	0.74405	0.001803	0.32995	0.085076	-0.17297	-0.66383	-0.86066	-0.046448	0.18506	-0.0004581	0.38353	-0.020412	-0.029857	-0.0069195	-0.006505	-0.019177	0	0.01108	-0.20299	0.15741	-0.0091286	-0.42128	0.32932	0.013429	0.98638	-0.012162	-0.008405	0.7706	0.43564	-0.0038779	-0.5937	-0.0040162	0.0052749	-0.0080532	-0.00036438	0.93691	-0.0095426	0.069804	0.18192	-0.0078863	-0.022383	1.8413	-0.077611	-0.30253	-0.3885	0.028555	-0.005814	-0.016397	-0.42396	0.08161	-0.060149	-0.014327	0.0056919	-0.0015243	0.0029989	
Amplification Peak 21 - CN values	15q21.3 	chr15:53689045-53797742(probes 1251820:1251908)  	chr15:53716226-53732048(probes 1251847:1251852)    	chr15:53690092-53766905(probes 1251821:1251873)    	0.10324	    0.15972		Actual Copy Change Given	0.011121	0.026233	0.36068	0.44139	0.0467	-0.00055444	0.016613	-0.69205	0.020203	1.5583	0.019783	0.0069435	-0.35664	0.87946	0.0031476	1.2335	1.8458	0.00083195	0.0098669	-0.27428	0.015917	-0.010709	0.0013868	-0.014228	-0.58853	-0.025249	0.22314	-0.76612	0.0062481	-0.33837	-0.2491	1.3033	0.016985	-0.0067813	-0.035312	-0.28531	0.035904	0.79258	0.015718	-0.1526	0.0022193	0.0040243	0.010146	-0.00055444	-0.007472	-0.059942	-0.025756	0.085799	-0.16993	-0.1378	-0.0053992	-0.74647	0.016425	0.0007747	-0.023429	-0.043331	0.11301	-0.024388	-0.6964	0.0084743	-0.0063957	0.0097794	0.54947	-0.38392	-0.013354	-0.022058	0.33189	0.0094491	0.019223	-0.029682	0	0.33545	0.0114	-0.00055444	0.013911	0.27789	0.0068044	-0.3015	-0.0015243	-0.0044312	0.010564	-0.0071958	
Amplification Peak 22 - CN values	15q26.3 	chr15:51701205-102531392(probes 1250541:1280707)	chr15:100779768-102531392(probes 1280160:1280707)	chr15:100147016-102531392(probes 1280022:1280707)	0.033697	    0.38609		Actual Copy Change Given	0.011121	0.023987	0.3561	-0.015054	0.0467	-0.0011087	0.0026729	0.035396	0.020203	0.71697	-0.0024938	0.0069435	-0.33987	-0.79394	0.71014	3.6569	-0.0011086	-0.0026322	0.0086135	-0.27512	0.021884	-0.010709	0.36362	0.66235	-0.58853	-0.025249	0.9146	-0.79024	-0.039655	-0.34962	-0.2491	-0.39697	0.0086135	-0.0067813	-0.035312	0.20129	0.029564	-0.40119	0.013032	-0.1526	0.0022193	-0.0033243	0	-0.00055444	-0.007472	-0.058596	-0.025756	0.075643	-0.16993	-0.58343	0.0012481	-0.74647	0.00070426	0.0007747	-0.023429	-0.043331	0.11301	-0.024388	0.02511	0.0084743	-0.0063957	0.0056045	0.49614	-0.3912	-0.0075622	-0.022058	0.33189	0.0094491	1.5215	-0.029682	0.011663	0.34529	0.0114	-0.00055444	0.013911	0.084498	0.53858	-0.3015	-0.0015243	-0.0044312	0.010564	-0.0071958	
Amplification Peak 23 - CN values	16q11.2 	chr16:31845698-47608671(probes 1294601:1295006)  	chr16:46708229-46850404(probes 1294655:1294713)    	chr16:46708229-47114320(probes 1294655:1294824)    	0.15211	    0.15211		Actual Copy Change Given	0.025041	0.0037465	-0.025483	-0.0060904	-0.33341	-0.0081624	0.023614	3.2799	0.0098669	0.75127	0.0019418	0.0015255	-1.0433	-0.76851	-0.35171	-0.052936	0.85633	0.015301	0.012097	-0.59721	-0.55226	-0.35378	-0.33745	-0.011887	0.45649	0.033605	0.04741	-0.10224	-0.24358	0.14533	-0.16967	-0.062495	-0.70298	-0.013402	-0.022469	-0.20902	-0.82007	0.042732	0.025671	0.01447	0.012376	0.0054139	-0.0012473	-0.0024938	-0.0036011	-0.21973	0.023426	-0.81524	-0.42243	0.19254	-0.013953	0.1038	0.016146	0.017578	0.44579	-0.03095	-0.72818	-0.044957	0.018803	0.010564	-0.0012762	0.0099187	-0.010094	-0.5719	-0.0067334	0.11536	-0.41366	0.023554	-0.81344	-0.025483	1.8458	0.13658	-0.8772	0.00083195	0.024548	-0.30979	-0.67582	-0.013063	0.0098669	-0.011887	0.022164	-0.00027724	
Amplification Peak 24 - CN values	17q23.1 	chr17:57648506-58857125(probes 1346749:1347280)  	chr17:58011836-58167484(probes 1346905:1346962)    	chr17:57393467-59154017(probes 1346606:1347426)    	0.0049879	   0.050489		Actual Copy Change Given	0.52048	-0.0056757	0.32979	-0.46355	0.058081	0.003093	0.83046	0.71887	-0.0084385	2.3085	0.88586	0.011679	0.61595	0.0041632	1.2949	-0.050911	0.049682	0.048546	0.022725	0.066372	0.24156	0.37307	0.007826	0.66604	0.29294	0.022824	-0.051586	-0.016979	-0.023989	0.088113	0.35448	0.67641	0.033127	-0.012713	0.1783	0.7592	0.017641	-0.3078	0.028341	0.02525	0.69774	0.70382	0.0022193	0.0013868	-0.0087146	-0.050911	-0.33052	0.037641	0.11858	1.2112	-0.0038779	0.097979	0.020763	0.005995	0.0076392	0.5403	0.024127	-0.023977	0.049966	0.0055529	0.0014965	0.0026872	1.6683	0.30409	0.84837	-0.0045695	0.64066	0.020343	1.3104	0.68943	1.1125	0.60557	0.82157	0.011958	0.42755	0.33577	0.019783	0.66481	0.0056919	-0.0096806	0.69559	0.4932	
Amplification Peak 25 - CN values	17q25.3 	chr17:80079436-80527577(probes 1358171:1358288)  	chr17:80295545-80325643(probes 1358200:1358204)    	chr17:64120133-81195210(probes 1349919:1358525)    	1.1647e-05	 0.00040873		Actual Copy Change Given	0.52048	-0.033132	0.32979	-0.50453	0.058081	1.0136	0.82294	0.79733	-0.0084385	0.78427	0.75166	-0.001796	2.6219	-0.087718	2.969	-0.050911	0.07484	0.048546	0.022725	0.095944	0.2653	0.37307	0.007826	0.66604	0.29294	0.022824	-0.051586	-0.016979	0.438	0.088113	0.42301	0.58166	0.70757	-0.01849	0.1783	0.7592	0.017641	0.39479	0.028341	0.048404	0.70588	1.4517	0.0022193	0.0013868	-0.0087146	-0.050911	-0.33052	0.037641	0.11858	0.27538	-0.0020784	0.097979	0.020763	0.005995	0.0076392	0.5403	0.024127	0.97626	1.4214	0.0055529	0.0014965	-0.0099755	-0.095384	0.30409	0.84837	-0.0045695	0.64066	0.020343	0.025671	0.61389	2.6783	0.010564	0.82157	0.011958	1.2943	0.33577	0.05025	0.66481	0.0056919	-0.0096806	0.69559	0.4866	
Amplification Peak 26 - CN values	19q13.11	chr19:33711641-33762256(probes 1414095:1414114)  	chr19:33713870-33750313(probes 1414098:1414110)    	chr19:33711687-33763120(probes 1414096:1414116)    	0.10324	    0.10324		Actual Copy Change Given	0.037782	-0.0023553	0.29565	0.36019	0.067232	0.93162	-0.014456	0.092473	0.026092	1.0804	0.85442	0.00028057	0.25496	0.016006	0.97042	-0.11155	2.3397	-0.0031859	0.060651	-0.21404	-0.54623	0.27214	0.0097276	-0.78361	-0.092874	-0.17115	0.19029	0.010285	-0.038714	0.58166	0.09159	-0.10211	-0.0073339	0.39512	0.17392	-0.25956	0.0017607	-0.0084385	0.045849	0.21072	0.013911	0.021884	0.41881	-0.0066432	-0.010094	0.45598	0.17385	-0.055499	0.19267	-0.13948	-0.020001	0.10264	0.63826	0.017018	-0.22034	0.0055529	0.029747	-0.076278	-0.69902	0.0055529	0.0039953	-0.0021197	0.98369	0.32157	0.11032	0.14043	0.54947	0.037216	0.024689	-0.06424	0.050234	0.20121	-0.020961	0.007073	0.03031	1.0587	-0.09446	-0.070341	0.027919	-0.017529	0.016006	-0.02057	
Amplification Peak 27 - CN values	20q13.2 	chr20:47874006-63025520(probes 1452927:1462473)  	chr20:52523620-52539526(probes 1455809:1455821)    	chr20:52523620-52540605(probes 1455809:1455824)    	0.18314	    0.18314		Actual Copy Change Given	0.56223	0.010077	0.35512	0.37216	0.044148	0.078871	0.012703	0.042604	-0.0020784	0.78119	1.0559	0.0055529	0.0098927	0.054945	0.20239	0.53292	0.038771	0.72527	0.0040243	0.065656	0.025812	0.89739	0.0036028	-0.049019	0.4215	0.067763	0.50585	0.0080567	0.45038	2.4729	-0.059673	0.71584	0.027357	0.41162	0.17091	0.28525	0.81956	1.3757	0.021463	0.015727	0.0063871	0.018523	-0.00066362	0.0027745	-0.02151	0.43868	0.25496	0.18707	0.080024	0.29089	-0.0077482	0.099579	0.67011	0.0082297	0	-0.042652	0.019083	-0.016017	0.016944	0.004719	-0.013568	0.012149	0.55071	0.3561	0.058131	0.51664	0.65763	0.014609	0.77174	0.041741	0.35151	-0.011795	0.018943	0.0056919	0.44223	0.077385	-0.087579	0.03291	0.01419	-0.0060904	0.019223	0.023706	
Deletion Peak  1 - CN values	1p36.32 	chr1:1-48649489(probes 1:24052)                      	chr1:1-3218922(probes 1:1)                            	chr1:1-34785218(probes 1:16582)                      	4.1878e-11	 4.8485e-10		Actual Copy Change Given	0.0114	-0.0059522	-0.43279	0.016705	-0.29863	-0.67985	0.21965	-0.69096	-0.028765	-0.9443	-0.023429	0.0078436	0.032563	0.85977	-0.41315	-0.018678	0.038065	0.0020805	-0.50038	0.45088	-0.54411	-0.38755	-0.36352	-0.90137	0.0069435	-0.036849	0.086233	-0.77549	-0.44512	-0.37954	0.091597	-0.05496	-0.70988	-0.47258	-0.16472	-0.31359	-0.83368	-0.81802	-0.87919	-0.20473	0.011539	-0.8065	0.001803	0.00055459	-0.026441	-0.33399	-0.11835	-0.81655	-0.058596	-0.55906	0.0049969	0.00069327	0.017124	0.0093436	-0.45511	0.88226	-0.74525	-0.71274	-0.70639	0.001803	-0.0016918	-0.0031345	0.46365	-0.56107	-0.28675	0	-0.40595	0	-0.81285	-0.90683	-0.40773	0	0.016565	-0.26817	-0.46067	-0.36578	-0.68661	-0.030067	-0.012024	-0.0092666	0.00055459	-0.0081624	
Deletion Peak  2 - CN values	1p35.2  	chr1:1-48465382(probes 1:23911)                      	chr1:31647935-31713851(probes 14910:14948)          	chr1:1-34785218(probes 1:16582)                      	0.00010901	    0.20048		Actual Copy Change Given	0.0114	0.001803	-0.41399	-0.0085766	-0.34881	-0.67958	0.21965	-0.66697	-0.028765	-0.076391	-0.029857	0.0078436	-0.74655	-0.013677	0.056896	-0.018678	0.057368	0.0033618	-0.50038	-0.27953	-0.54411	-0.3539	0.003191	-0.046989	0.0069435	-0.036849	0.086233	-0.77549	-0.49566	-0.38347	0.1014	-0.051316	-0.69604	-0.47258	-0.16472	-0.31289	-0.83368	-0.0092666	0.048061	-0.20473	0.011539	0.023426	0.001803	0.00055459	-0.005814	0.037924	-0.11835	-0.81655	-0.058596	-0.10131	-0.0023553	0.00069327	-0.67196	0.0093436	-0.45511	0.83949	0.035242	-0.051451	-0.67352	0.001803	-0.0016918	-0.0031345	-0.082535	-0.56107	-0.28675	0	-0.40595	0	-0.81285	-0.013917	-0.36116	0	0.016565	0.0052368	-0.41388	-0.087788	-0.3071	-0.030067	-0.012024	-0.0092666	0.00055459	-0.0081624	
Deletion Peak  3 - CN values	2p15    	chr2:1-243199373(probes 129197:260550)               	chr2:63813459-63838260(probes 166081:166089)        	chr2:63809747-63911153(probes 166078:166127)        	0.22938	    0.23682		Actual Copy Change Given	0.45905	-0.55387	0.29736	0.24078	0.00027728	0.50724	0.0082437	-0.0038651	-0.00041585	-0.20714	-0.88689	-0.0077482	0.013213	-0.79327	-0.018396	0.05637	-0.025483	-0.0069195	-0.0027707	-0.00097017	0.00055459	0.020839	-0.0051227	-0.0084385	-0.55867	0.014988	0.24272	0.0075	0	0.23892	-0.047395	0.060508	-0.0092666	-0.0049844	0	0.93539	-0.01055	-0.81203	-0.0040433	0.13302	0.00083195	0.014066	0	0.0044411	0.0041632	0.047978	0.13155	0.023706	-0.00045984	0.11624	-0.026988	0.68663	0.00013863	-0.019693	0.1167	-0.081188	-0.0051227	-0.012576	-0.00027724	0	0	0	-0.036946	-0.0029091	0	-0.016429	0.32125	0.0016642	-0.021784	-0.80733	-0.19668	0.31787	-0.0038779	-0.00097017	0.36756	0.043599	-0.026068	0.43994	-0.011618	-0.00041585	-0.0037395	0.0055529	
Deletion Peak  4 - CN values	2q22.1  	chr2:139655617-143637838(probes 201408:203837)    	chr2:140976294-142894275(probes 202130:203400)    	chr2:142042799-142047443(probes 202766:202767)    	0.019568	   0.082089		Actual Copy Change Given	0.45905	-0.010689	0.31578	-0.46493	-0.011064	-0.021373	-0.0047986	-0.0038651	0.00027728	-0.19375	-0.0053992	-0.0077482	0.013213	-0.01106	0.0032865	-0.68077	0.0024969	-0.0083005	-0.01568	-0.034359	0.00055459	-0.026229	-0.0051227	0.0033299	-0.55867	0.025069	-0.075745	-0.01037	0	0.23892	-0.043059	-1.1073	-0.0049633	0.0076198	0	0.11675	-0.01055	0.35741	-0.012713	0.13302	0.00083195	-0.0020784	0	0.0044411	0.0041632	0.041211	0.13155	0.023706	-0.00045984	0.12138	-0.0031859	-0.13574	-0.77405	-0.019693	0.12402	0.0081959	-0.0051227	0.011121	-0.46344	0	0.0010599	0	0.040468	-0.0029091	0	-0.016429	0.33189	0.0016642	-0.021784	0.022444	0.12961	0.31787	-0.0038779	-0.00097017	0.35768	0.05862	-0.026068	0.45487	-0.020123	-0.00041585	-0.0037395	0.0030522	
Deletion Peak  5 - CN values	2q23.1  	chr2:136870324-166062106(probes 199978:216504)    	chr2:148775624-149272575(probes 206572:206787)    	chr2:148631536-149151357(probes 206517:206733)    	0.021412	    0.22062		Actual Copy Change Given	0.45905	-0.0036554	0.31578	0.41028	-0.011064	-0.021373	-0.0047986	-0.0038651	0.00027728	-0.19375	-0.0053992	-0.010646	0.013213	-0.01106	0.011078	-0.68077	-0.018216	-0.0083005	-0.01568	-0.034359	0.00055459	-0.026229	-0.0051227	-0.72976	-0.55867	0.025069	-0.075745	-0.01037	0	0.23892	-0.043059	-1.1073	-0.0049633	0.0076198	0	-0.43349	-0.84061	-0.41201	-0.012713	0.13302	-0.0030475	0.0029133	0	0.0044411	0.0041632	0.039877	0.011157	0.023706	-0.00045984	0.12138	-0.0031859	-0.13574	-0.012576	-0.019693	0.12402	-0.10213	-0.0051227	0.011121	-0.0062286	0	0.0042731	0	-0.016841	-0.0029091	0	-0.016429	0.33189	0.0016642	-0.021784	-0.79496	0.12961	0.31787	-0.0038779	-0.00097017	0.35768	0.039669	-0.026068	0.45487	-0.58559	-0.00041585	-0.0037395	0.0030522	
Deletion Peak  6 - CN values	2q37.3  	chr2:207636660-243199373(probes 239477:260550)    	chr2:242253996-242298809(probes 260428:260444)    	chr2:237653540-243199373(probes 257756:260550)    	0.044235	    0.18016		Actual Copy Change Given	0.45905	-0.56425	0.2958	0.38138	0.041883	-0.028901	-0.0047986	-0.015041	-0.0017432	-0.23826	-0.015054	-0.010646	0.009776	-0.83389	-0.057427	-0.68761	0.047978	-0.0070576	0.0023581	0.010285	0.015308	-0.026229	-0.0051227	-0.034768	-0.55867	0.025069	-0.4519	0.69391	0	-0.90578	-0.043059	-0.35852	0.018523	-0.027261	0	-0.50408	-0.017708	-0.41981	0.026514	0.2153	-0.0023553	-0.79349	0	0.0037764	0.0041632	0.045424	0.045566	0.023706	-0.00045984	0.12138	-0.02288	-0.36895	-0.0056757	0.77353	0.12402	-0.044144	-0.77082	0.0030522	0.020497	0	0.0042731	-0.007835	-0.086784	-0.0081624	0.024737	-0.022189	0.2506	-0.0016629	-0.021784	0.010424	0.12887	0.31787	-0.0038779	-0.00097017	0.35768	-0.033405	-0.049424	0.44062	-0.0013858	-0.00041585	-0.0037395	0.0030522	
Deletion Peak  7 - CN values	3p13    	chr3:17195937-93784545(probes 269767:311502)        	chr3:70999879-71635142(probes 301223:301608)        	chr3:71136682-71145428(probes 301318:301319)        	0.1833	    0.18016		Actual Copy Change Given	0.0033299	-0.011344	-0.40672	-0.15066	0.012376	0.010285	-0.0032768	-0.020221	-0.0063668	0.039478	-0.0048461	-0.0094163	-0.33098	0.010982	-0.83674	0.056798	-0.0123	-0.0032624	-0.0033243	0.016146	-0.5425	0.067023	0	-0.78361	0	0.025826	0.36575	-0.77218	-0.49632	-0.34779	0.10672	0.033972	0.013632	0.0079175	0.05153	-1.2929	0.0092673	0.32044	-0.024798	-0.18923	-0.0020784	0.0076392	-0.010922	0.0029133	0	0.48975	0	-0.091552	0.078727	0.44478	0.004719	0.063939	-0.0073339	-0.0012137	0.013632	0.43361	0	0.018943	-0.0076101	-0.0033674	0.0012191	-0.0082492	-0.6214	0	-0.0011992	-0.034086	0.34502	-0.020412	0.0030522	0.001803	0.038897	-0.39219	0.065513	-0.00055444	-0.011887	-0.16332	0.0024969	0.044356	-0.015329	0	-0.013127	-0.0016629	
Deletion Peak  8 - CN values	4q24    	chr4:77232044-115601010(probes 408648:430613)      	chr4:104509758-104641919(probes 424234:424296)    	chr4:76511747-115889391(probes 408200:430764)      	0.00051487	   0.014118		Actual Copy Change Given	-1.0363	-0.019863	0.004926	0.37775	-0.012333	-0.62808	-0.83621	-0.037525	-0.0040157	-0.86578	-0.94678	-0.015592	-0.33306	-0.022881	-0.27216	-0.68375	-0.05752	-0.0059522	-0.015466	-0.68469	-0.020549	-0.33184	-0.0062286	-0.73854	-0.57348	-0.046622	-0.10092	0.0069435	-0.49381	-0.42418	-0.21664	0.043157	-0.68697	0.0064566	-0.22625	-0.78424	-0.83731	-0.81104	-0.0273	-0.028901	-0.0051227	-0.78623	0.39861	-0.00097017	0.006109	-0.093535	-0.38705	-0.62598	-0.40562	-0.15131	0.0058309	-0.73888	-0.018216	0.00072692	-0.21676	-0.72868	-0.0056757	-0.64593	-0.0080244	-0.0066432	0.0063581	-0.0090061	0.0083351	-0.56952	-0.20792	-0.051856	-0.0064761	-0.023977	-0.014916	0.024689	-0.7149	-0.00027724	-0.01037	-0.019589	-0.021235	-0.4108	-0.64931	-0.73271	0.2456	0.0093098	-0.0123	-0.0012473	
Deletion Peak  9 - CN values	4q35.1  	chr4:176920228-191154276(probes 463973:469764)    	chr4:185509761-185721423(probes 468218:468249)    	chr4:164509165-191154276(probes 457421:469764)    	6.2475e-08	 1.0642e-06		Actual Copy Change Given	-0.057385	-0.011335	0.0069435	-0.48039	-0.012333	-0.62808	-0.0079769	-0.73063	-0.0040157	0.91501	-0.97395	0	-0.32182	-0.0063668	-0.26748	-0.73127	-0.43344	-0.0059522	0.0020805	-0.68615	-0.012162	-0.33184	-0.0062286	-0.012576	-0.58235	-0.36955	-0.12921	-0.78074	-0.50328	-0.41212	-0.21664	0.04159	-0.68697	0.42987	-0.22625	-0.76693	-0.83731	1.4044	-0.0042929	-0.028901	-0.008221	-0.015054	0.39861	-0.00097017	0.006109	-0.083997	-0.38705	-0.62598	-0.67655	-1.2929	-0.026441	-0.75046	-0.018216	-0.90277	-0.21676	-0.13199	-0.0056757	-0.64593	-0.011611	-0.77731	0.0027455	-0.0090061	-0.041974	-0.56952	-0.20792	-0.051856	0	-0.036265	-0.014916	-0.82944	-0.74084	-0.00027724	-0.0019399	-0.019589	-0.017803	-0.79411	-0.602	-0.73271	0.25137	0.00597	-0.0123	0.0034687	
Deletion Peak 10 - CN values	6q16.3  	chr6:72593884-125149024(probes 609810:639199)      	chr6:101844516-102521593(probes 625986:626405)    	chr6:102179838-102186783(probes 626196:626197)    	0.058402	    0.13487		Actual Copy Change Given	-0.0053992	-0.0076101	-0.8154	-0.89932	-0.0037395	0.0054139	-0.04247	-0.012609	0.020483	0.032704	-0.0045695	-0.037601	0.03214	-0.012162	0.092705	-0.70638	0.36821	0.74309	-0.049289	0	-0.55236	0.018754	-0.082717	0.52923	0.49701	0.013033	-0.26474	-0.77388	-0.0030475	-0.7826	-0.22773	-0.73864	-0.006505	-0.43083	-0.42331	-0.2772	-0.00073528	-0.40517	0.05873	-0.20087	-0.0085766	-0.0037395	-0.43431	-0.023703	-0.81252	-0.53652	-0.31459	-0.8126	-0.16955	-0.15796	-0.76621	0	-0.020396	-0.0080881	-0.51209	0.43842	-0.77998	0.026935	-0.71515	-0.0026322	-0.85144	-0.0081112	0.023566	0.36904	0.4733	-0.048971	-0.40418	-0.025483	-0.82484	-0.80766	-0.72933	-0.39941	0.10969	0	-0.014753	-0.37831	-0.0011087	-0.014027	-0.097232	0.00041593	-0.015329	0.11228	
Deletion Peak 11 - CN values	6q26    	chr6:126802823-171115067(probes 640229:666849)    	chr6:163833536-164001491(probes 663589:663671)    	chr6:163832492-164159742(probes 663588:663774)    	0.049474	   0.095221		Actual Copy Change Given	-0.0013858	0.0073609	-0.8154	-0.01106	-0.0037395	0.0012481	-0.04247	0.013366	0.020483	0.014749	0.050944	-0.037601	0.021603	0.0013868	-0.066428	-0.70638	0.42083	0.74309	-0.10962	0.017404	-0.55236	0.017767	-0.082717	-0.8405	0.49355	-0.30795	-0.25842	-0.77388	-0.023359	-0.36374	-0.23153	-0.7692	-0.006505	-0.4534	-0.42331	-1.1704	0.015405	-0.40815	0.079015	-0.20087	-0.013815	0.01433	-0.0096806	-0.023703	-0.84916	0.53819	-0.33699	-0.8126	-0.16955	-0.16076	-0.77447	0	-0.010094	-0.0080881	-0.52063	0.45173	-0.80129	-0.67251	-0.74003	-0.0026322	-0.85144	-0.0081112	-0.0056757	0.36904	0.48188	-0.048971	-0.40418	-0.025483	-0.84681	-0.80766	-0.7686	-0.39941	0.10969	0	-0.016704	-0.36873	-0.49486	-0.026788	-0.097232	0.00041593	-0.015329	0.11228	
Deletion Peak 12 - CN values	8p23.2  	chr8:1953486-6262191(probes 748871:750801)            	chr8:2784419-4854274(probes 748997:750422)            	chr8:1-9189970(probes 748210:751910)                   	3.1932e-05	 3.1932e-05		Actual Copy Change Given	-0.60352	0.010564	0.010285	-0.47003	-0.75543	-0.69133	-0.83083	-0.011185	0.026654	0.00089726	0.016154	-0.070992	-1.1078	-0.82056	-1.2929	-0.74421	-0.88827	-0.0018014	-0.027535	-0.29343	-0.016704	-0.72998	-0.36855	-0.79403	0.041458	-0.46677	-0.14807	0.0054139	0.1057	-0.88835	0	-0.78555	-0.69794	-0.89742	-1.0491	0.36731	0.064181	-0.81622	-0.013264	-0.11665	0.0098669	0.0068044	0.41011	-0.0087146	-0.80866	-0.62893	-0.55046	0.028481	-0.42145	-0.83655	-0.77218	-0.73258	-0.728	-0.000181	-0.46368	-0.67609	-0.77174	-0.68077	0.66715	0.010982	-0.8602	-0.94818	-0.60274	0.3628	-0.709	-0.119	-0.8112	-0.53056	-0.012851	-0.82676	-1.2168	-0.005814	-0.0084385	-0.17588	-0.43246	-0.41794	-0.66187	0.46955	-0.6146	0.0016642	-0.78824	0.037217	
Deletion Peak 13 - CN values	9p21.3  	chr9:21410163-26068229(probes 842953:845815)        	chr9:21959052-21997722(probes 843281:843294)        	chr9:21620607-24087240(probes 843110:844681)        	0.013742	   0.014118		Actual Copy Change Given	-0.5985	-0.49882	-0.14451	-0.44217	-0.66467	0.0034687	-0.80672	0.028916	0.00013863	0	0.010703	-0.00027724	-0.32913	0.0051359	0.1849	-0.70397	-0.0033243	0.00055459	-0.0062286	-0.63784	0.011539	-0.0024184	0	-0.16612	0.4844	-0.12294	-0.16472	-0.012576	-0.5036	-0.39112	0.0029133	-0.34538	-1.2929	-0.032178	-0.2368	-0.33935	-0.82189	-0.3764	-0.0052055	0.0066653	0	-0.0096806	-0.0044312	0.0015255	-0.0041546	-0.087181	-0.20311	-0.096704	-0.24387	-0.13922	0.073546	-0.74786	-0.008922	0.0022326	-0.233	-0.068797	0.011958	-0.65631	0.0068044	-0.0022194	-0.0072545	0.00060609	-0.55015	-1.2929	-0.12605	-0.030813	-0.017903	-0.0031446	-0.81491	-0.0027707	-0.75961	-0.38133	0.80792	-0.013402	0.0064121	-0.032877	-0.047587	-0.013889	-0.014641	-0.0034627	-0.77456	-0.0011087	
Deletion Peak 14 - CN values	10p15.3 	chr10:1-7746594(probes 897845:902833)                 	chr10:1-742144(probes 897845:897932)                   	chr10:467406-484158(probes 897883:897891)              	0.15506	    0.15474		Actual Copy Change Given	-0.0013858	0.0038854	1.0992	2.034	0.021373	0.0011093	0.013819	0.034408	0.0322	-0.011293	-0.011887	0.0062481	-0.34171	0.078582	0.72332	0	0.011539	0.00013863	0.0038854	0.0072217	0.037782	-0.091943	0.0012481	-0.028355	0.81103	0.059039	0.3832	0.7072	1.3275	0.31578	0.1848	0.0055529	0.020839	-0.0083005	-0.055903	-1.002	0.01974	0.035806	0.013074	0	0.0015255	0.0022193	-0.0063668	-0.045821	-0.0013858	0.10672	-0.048797	0.058224	0.069095	-0.0069112	-0.0098185	-0.77515	0	0.071713	0.0097276	-0.087049	0.0020805	0.00055459	0.0077783	0.0013868	0.009226	-0.95207	-0.0073339	0.69989	0.0074091	0.054821	0.38122	-0.0012473	0.0097276	-0.00069303	0.034521	-0.0033243	0.049682	0.024829	0	0.15352	0.046417	-0.018015	-0.0094046	-0.0044312	-0.0047079	0.0029133	
Deletion Peak 15 - CN values	10q23.31	chr10:89604733-90034038(probes 950045:950480)      	chr10:89617402-89735596(probes 950052:950239)      	chr10:88474625-94063222(probes 949622:952998)      	4.2453e-06	 4.9315e-05		Actual Copy Change Given	-0.0013858	-0.52716	-0.413	-0.45447	0.026373	-0.01106	0.013819	-0.70372	0.0322	-1.2929	-0.021784	0.0062481	-0.016979	-1.0326	-0.36344	0	-0.67251	-0.58863	0.0045758	0.023005	-0.56256	-0.057122	0.0012481	-0.75299	-0.18379	-0.3117	0.32589	-0.76158	-0.49284	0.26037	-0.2396	-0.73284	0.016006	-0.43493	-0.070823	-0.28744	0.01974	-0.37741	0.00060276	0	0.0015255	-0.00013862	-0.0063668	-0.00027724	-0.0013858	-0.060614	-0.26697	0.058224	0.064797	0.0058852	-0.0078863	-0.33168	0.00013863	0.0051204	0.0097276	-0.072808	0.64818	-0.6726	-0.0015243	0.0013868	0.00080299	0.0021801	-0.010094	0.69989	0.0074091	0.057796	0.38122	-0.0033243	0.0086972	-0.81152	0.027548	-0.38432	-0.89938	0.024829	0	-0.39341	0.046417	-0.025967	-0.0053889	-0.0030475	0.0029133	0.0029133	
Deletion Peak 16 - CN values	10q26.13	chr10:77160683-135534747(probes 941908:978749)    	chr10:123501958-123690148(probes 971811:971920)  	chr10:110403376-135534747(probes 962645:978749)  	0.0027295	    0.12017		Actual Copy Change Given	-0.0013858	-0.53044	-0.413	-0.46515	0.026373	-0.012851	0.013819	-0.70372	0.032563	-0.89962	-0.014803	0.0062481	-0.31295	0.027357	-0.35628	0	-0.87205	-0.01106	0.011958	0.023005	-0.56256	-0.092141	0.0012481	-0.051181	-0.18379	-0.3117	-0.1467	-0.78302	-0.0027707	0.26037	-0.2396	-0.77863	0.016006	0.00097064	-0.070823	-0.79907	0.01974	-0.37178	0.00060276	0	0.0015255	-0.10749	-0.0063668	-0.00027724	-0.0013858	0.3161	-0.26697	0.058224	0.064797	0.015595	0.0019418	-0.33668	0.00013863	0.0051204	0.0097276	-0.072808	0.64818	-0.6715	-0.0015243	0.0013868	0.00080299	0.0021801	0.46793	0.69989	0.0074091	0.057796	0.38039	0.020343	0.0030618	-0.81876	0.027548	-0.39517	-0.90777	0.024829	-0.00065609	-0.39341	-0.51383	-0.042047	-0.00027724	-0.0030475	0.0029133	0.0029133	
Deletion Peak 17 - CN values	11q14.1 	chr11:77811864-102719729(probes 1019575:1035204)  	chr11:83165646-85348794(probes 1023162:1024340)    	chr11:84185248-84189168(probes 1023752:1023753)    	0.091209	   0.088525		Actual Copy Change Given	-0.013677	-0.53368	-0.39664	0.012376	-0.27021	0.0069435	0.067138	-0.002534	0	-0.025213	0.00097064	0.0056919	-0.34194	-0.011198	-0.29583	-0.71274	0.0015255	-0.0095426	-0.0069195	0.014749	0	-0.0086394	0.00097064	-0.76407	-0.59224	-0.045807	-0.27786	-0.072541	-0.038173	-0.39419	0.01419	0.39828	-0.058866	-0.0028302	0.1496	-0.88924	0.0018994	-0.00069303	-0.0030475	-0.18433	-0.0016629	0.0044411	-0.0051227	-0.0026239	-0.0083005	-0.069332	0.023145	0	0.070449	-0.14463	-0.0062286	-0.054016	-0.012576	-0.00059753	-0.24618	0.43817	-0.0023553	0.53766	-0.017116	-0.0027707	-0.004547	0.0026872	-0.0055375	-0.0078863	-0.13492	-0.041702	-0.020687	-0.0098185	-0.010784	-0.012404	-0.6675	-0.0094046	0.017404	0.0015255	-0.011335	-0.082668	0.027357	-0.01499	0.51159	-0.0027707	-0.0020784	-0.0045695	
Deletion Peak 18 - CN values	12p12.1 	chr12:1-68058246(probes 1056037:1091825)             	chr12:23674573-24103478(probes 1069240:1069549)    	chr12:23865212-23869082(probes 1069395:1069396)    	0.1416	    0.13487		Actual Copy Change Given	-0.00097017	-0.56206	-0.011198	0.93061	-0.0014836	-0.0034627	-0.014731	0.017557	-0.0008316	-0.86554	0.0070826	-0.0047079	0.0077783	-0.009499	-0.84093	-0.70997	-0.011611	-0.79828	0.00069327	0.012455	-0.034631	-0.0046325	-0.0024938	-0.00013862	0.43598	-0.12256	-0.0017355	-0.76492	0.0016642	0	0.042024	0.029044	0	0	-0.22724	0.21369	-0.0090193	0.0030522	-0.013242	-0.010707	-0.0020784	-0.0060904	-0.005814	-0.0037395	0.0023581	0.17468	-0.27405	-0.15067	0.078871	-0.58607	0.0015255	-0.26841	-0.0047079	-0.00074396	-0.24423	-0.68833	-0.013815	0.0044411	-0.70298	0.001803	0.0035786	-0.0065247	0.019503	0.074265	-0.29634	0.27606	-0.025072	-0.0080244	-0.0008316	0.00083195	-0.67362	0.33351	-0.0048461	-0.0076881	-0.0040162	0.11638	-0.0011087	-0.72053	-0.015191	-0.013953	-0.0044312	-0.0034627	
Deletion Peak 19 - CN values	12q24.33	chr12:109528819-133851895(probes 1117644:1130013)	chr12:129276642-131078424(probes 1128729:1129147)	chr12:120680830-133851895(probes 1124270:1130013)	0.0080999	  0.0081101		Actual Copy Change Given	-0.0042929	0.0095883	-0.011198	-0.062764	0.032422	-0.0083005	-0.019542	0.06338	-0.0008316	-0.031086	-0.012989	-0.0047079	0.0029133	0.021183	-0.84806	-0.048613	0.068043	0.060936	0.00069327	0.012455	-0.34308	-0.013327	-0.0024938	-0.047936	0.43598	-0.11447	-0.057789	-0.76501	0.0016642	0	0.045566	-0.03885	-0.0019399	-0.02845	0.56632	0.11104	0.0039819	0.020063	-0.75651	0.019923	0.00069327	0.010982	0	-0.0037395	-0.0019984	0.18328	-0.24782	-0.15067	0.072749	0.10907	-0.0095426	-0.74708	-0.0047079	-0.0044692	-0.24423	0.51333	-0.73857	-0.68323	0.68291	-0.00041585	-0.0024029	0.001577	-0.046854	0.074265	-0.29634	0.27606	-0.023509	-0.0080244	-0.0008316	-0.0043518	-0.024129	0.33351	-0.0048461	-0.0012473	0.0076392	0.083432	-0.50712	0.0075643	-0.015329	-0.00027724	0.015587	-0.0034627	
Deletion Peak 20 - CN values	13q14.2 	chr13:48833767-49281290(probes 1148608:1149014)    	chr13:48875753-49060837(probes 1148631:1148857)    	chr13:35079118-92268054(probes 1139700:1171907)    	4.675e-08	 4.5598e-08		Actual Copy Change Given	-0.00097017	-0.01037	-0.39842	-0.43645	0	-0.6537	-0.033358	-0.72887	0.013288	-0.87466	-1.2929	-0.055229	-0.33837	-0.0095426	-1.2929	-0.69776	-1.2838	-0.0060904	-0.013127	-0.30932	-0.55046	-0.95771	-0.37178	-0.76843	-0.59423	-0.2724	-0.4034	-0.75288	-0.00072778	-0.3543	-0.24375	-0.94423	-0.69586	-0.86066	-0.046448	-0.32503	-0.0004581	-0.41201	-0.020412	-0.029857	-0.0069195	-0.010094	-0.019177	0	0.015028	-0.18395	0.15741	-0.021098	-0.4209	0.14623	-0.75754	0.023145	-0.012162	-0.0032908	-0.76962	-0.69974	-0.0038779	-0.5937	0	0.0052749	-0.0080532	-0.0025808	-0.029038	-0.0095426	0.071663	0.18192	-0.02012	-0.019314	-0.037218	-0.077611	-0.65828	-0.3885	0.00046522	-0.0016629	-0.023703	-0.44326	-0.46759	-0.060149	-0.014327	0.0056919	-0.0015243	0.0054139	
Deletion Peak 21 - CN values	14q23.3 	chr14:37121924-90515109(probes 1195706:1226946)    	chr14:66970921-67652098(probes 1212463:1212673)    	chr14:67346354-67581075(probes 1212561:1212642)    	0.067778	   0.068575		Actual Copy Change Given	0.0026357	-0.64227	-0.40174	-0.042652	0.01642	0.0034687	-0.064417	0.013645	-0.019715	0.0041632	-0.91296	-0.0025191	-0.34217	-0.48102	0.087634	-0.67391	-0.88349	0.73113	0	-0.63481	-0.19087	-0.3452	0.0023581	-0.00041585	-0.5793	-0.30819	0.4738	-0.76107	-0.51486	-0.44178	0.10599	-0.19437	0.019533	-0.42243	0.16775	-1.2336	0.018201	-0.53815	0	-0.34916	-0.0056805	0.74727	-0.0026322	0.00041593	0.00055459	-0.040616	-0.27033	0.042449	-0.42865	-0.41541	-0.0030475	-0.73749	-3.9124e-05	0.0018367	-0.2474	-0.071472	0.0056919	-0.0084385	-0.70729	0.003191	-0.85235	-0.00050298	-0.06048	-0.56843	-0.058415	0.10022	0.32818	-0.0077482	0.0072217	-0.026304	-0.68379	-0.0037395	0.0049616	-0.0091286	0.0033299	-0.24873	-0.0053992	-0.0004904	0.13672	0.0035377	0.0032433	-0.0060904	
Deletion Peak 22 - CN values	15q21.1 	chr15:1-57219891(probes 1236159:1254046)           	chr15:48694212-48939180(probes 1248736:1248921)    	chr15:48821049-48824014(probes 1248829:1248830)    	0.17341	    0.16633		Actual Copy Change Given	0.011121	0.0051359	0.36068	-0.014916	0.032269	0.017544	0.016613	-0.69205	0.020203	0.74689	0.0083351	0.0069435	-0.35664	0.0063871	-0.47102	-0.018628	0.36526	0.00083195	0.0098669	-0.27428	0.015917	-0.010709	0.0013868	-0.014228	-0.57979	-0.025249	0.22314	-0.76612	0.0062481	-0.33837	-0.2491	-0.74812	0.016985	-0.0067813	-0.035312	-0.28531	0.035904	0.004719	0.015718	-0.1526	0.0022193	0.0040243	0.010146	-0.00055444	-0.007472	-0.059942	-0.025756	0.085799	-0.16993	-0.1378	-0.0053992	-0.74647	0.016425	0.0007747	-0.023429	-0.043331	0.11301	-0.024388	-0.6964	0.0084743	-0.0063957	0.0019161	-0.0066432	-0.38392	-0.013354	-0.022058	0.33189	0.0094491	0.019223	-0.029682	0	0.33545	0.0114	-0.00055444	0.013911	0.23874	0.0068044	-0.3015	-0.0015243	-0.0044312	0.010564	-0.0071958	
Deletion Peak 23 - CN values	16q23.1 	chr16:59786347-90354753(probes 1303299:1321522)    	chr16:77819475-78015441(probes 1313680:1313882)    	chr16:77874858-77979107(probes 1313737:1313844)    	0.022201	   0.022201		Actual Copy Change Given	0.022725	0.0065262	-0.025483	-0.45083	-0.33341	0.00597	0.023614	-0.67902	-1.1212	-0.14554	-0.94335	0.0015255	0.034536	-0.7911	-0.41227	-0.052936	-0.85998	0.0036076	0.013632	-0.6138	-0.56495	-0.35378	0.017824	-0.81285	-0.59048	0.033605	-0.45993	-0.10224	-0.32321	-0.61508	-0.16967	-0.062495	-0.70298	-0.013402	-0.022469	-0.75508	-0.82007	0.028481	0.025671	0.01447	0.012376	-0.0039189	-0.0012473	-0.0024938	-0.0022168	-0.22675	0.023426	-0.81524	-0.43801	-0.58018	0.0070826	0.095944	0.016146	0.017578	0.016425	-0.03095	-0.74734	-0.0094046	0.020063	-0.0026094	-0.0012762	0.0099187	0.53573	-0.5719	-0.0067334	0.11536	-0.40263	0.023554	-0.86688	-0.025483	-0.6435	0.13658	-0.91635	0.00083195	0.027357	-0.43691	-0.67582	-0.78273	0.0098669	-0.011887	0.027638	-0.00027724	
Deletion Peak 24 - CN values	17p12   	chr17:15891757-16121163(probes 1329088:1329184)    	chr17:15892442-15936104(probes 1329089:1329106)    	chr17:15557741-16032764(probes 1328992:1329147)    	0.0070653	   0.006758		Actual Copy Change Given	-0.56256	-0.54261	0.32979	-0.49642	0.058081	-0.66615	-0.81175	0.077132	-0.0084385	-0.91241	-0.95645	-0.12404	-0.73459	0.027638	-0.88026	-0.78959	-0.87322	-0.79703	0.027778	-0.57704	1.3003	-0.37645	-0.35874	-0.79436	0.29294	-0.29459	0.58238	-0.75763	-0.53459	0.09333	-0.25588	-0.79386	-1.2929	-0.43756	-0.60419	0.25145	0.017641	-0.79411	-0.73486	0.02525	-0.74255	-0.80044	0.0043021	0.0013868	-0.0087146	-0.033814	-0.33052	0.037641	-0.40827	-0.55579	-0.76252	-0.74116	0.020763	0.012968	0.0076392	-0.64856	0.024127	-0.05496	0.047836	0.0055529	0.0014965	0.0026872	-0.06585	0.30409	-0.72638	-0.0045695	-0.81647	0.020343	-0.77863	-0.82911	-0.46207	0.0037465	-0.91093	-0.15907	-0.40595	0	-0.67665	-0.72407	-0.59058	-0.0096806	0.0091705	-0.012024	
Deletion Peak 25 - CN values	19p13.3 	chr19:1-59128983(probes 1401212:1425172)             	chr19:3352449-3481613(probes 1401935:1401968)        	chr19:3412058-3418988(probes 1401952:1401953)        	0.10016	    0.10644		Actual Copy Change Given	0.037782	-0.00027724	0.29565	0.38023	0.067232	-0.031496	-0.053484	-0.60631	0.026092	-0.049695	-0.061689	0.00028057	-0.46865	-0.038034	-0.094501	-0.11155	0.010146	-0.0031859	0.060651	-0.53966	-0.01106	0.27214	0.0097276	-0.10893	-0.092874	-0.15263	0	0.010285	-0.038714	-0.46589	0.09159	-0.10211	-0.0073339	-0.51311	0.17392	-0.22668	0.0017607	0.0076392	0.045849	0.21376	0.013911	0.049824	0.41865	-0.0066432	-0.010094	0.45598	-0.22539	-0.055499	-0.38022	-0.13948	-0.020001	-0.70962	0.62093	0.017018	-0.46812	0.026514	0.029747	-0.076278	0.081755	0.0055529	0.75811	-0.0018884	1.2375	0.30729	0.11482	0.14043	0.54947	0.037216	0.79316	-0.084709	-0.50844	0.20121	-0.020961	-0.001862	0.03031	-0.39885	-0.09446	-0.070341	0.027919	-0.017529	0.016006	-0.055769	
Deletion Peak 26 - CN values	22q13.31	chr22:42474454-51304566(probes 1495301:1500002)    	chr22:47006513-47078527(probes 1498162:1498188)    	chr22:42498950-51304566(probes 1495313:1500002)    	0.0052457	  0.0052217		Actual Copy Change Given	0.031155	-0.0071958	-0.42735	0.77186	0.088692	-0.68876	0.0028159	0.11097	0.047268	-0.68013	-0.028901	-0.0071958	0.3395	-0.59779	-1.2929	-0.1088	-0.81587	0.001803	0.039619	0.11756	-0.38493	0.26444	0.010703	-0.093799	-0.60642	-0.28374	-0.054555	0.008892	0.90251	-0.72101	-0.25239	-0.20995	-0.034223	0.38952	0.072109	0.30051	0.047509	0.12314	0.76217	0.060794	0.019783	-0.80426	-0.0020784	-0.005261	-0.0048461	0.0056919	0.01433	0.060651	0.098851	0.65113	-0.012851	0.081177	0.027497	0.020937	-0.23018	0	0.034677	-0.078144	0.053237	0.0065262	-0.0069483	0.016337	-0.046854	-0.39419	-0.013079	0.046842	0.65167	0.027638	0.033267	-0.8668	-0.35306	-0.37898	-0.020549	0.0034687	0.03637	0.16091	0.60792	-0.029794	0.25777	-0.0073339	-0.78058	-0.0069195	
