Analysis Overview for 13 September 2012
Maintained by TCGA GDAC Team (Broad Institute/Dana-Farber Cancer Institute/Harvard Medical School)

This is the analysis overview for Firehose run "13 September 2012".


Note: These results are offered to the community as an additional reference point, enabling a wide range of cancer biologists, clinical investigators, and genome and computational scientists to easily incorporate TCGA into the backdrop of ongoing research. While every effort is made to ensure that Firehose input data and algorithms are of the highest possible quality, these analyses have not been reviewed by domain experts.

A total of 472 reports are available for analysis run "13 September 2012".

Cancer Types

Table 1.  Click "Browse" to view reports for a cancer type of interest. If you prefer to view reports on your own computer, you may download a ZIP archive containing all reports for a cancer type by clicking "Download".

Cancer Type Abbreviation Reports HTML ZIP
Bladder Urothelial Carcinoma BLCA 21 Browse Download
Breast Invasive Carcinoma BRCA 28 Browse Download
Cervical Squamous Cell Carcinoma CESC 10 Browse Download
Colon Adenocarcinoma COAD 22 Browse Download
Colon/Rectal Adenocarcinoma COADREAD 28 Browse Download
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma DLBC 1 Browse Download
Glioblastoma Multiforme GBM 26 Browse Download
Head and Neck Squamous Cell Carcinoma HNSC 18 Browse Download
Kidney Renal Clear Cell Carcinoma KIRC 28 Browse Download
Kidney Renal Papillary Cell Carcinoma KIRP 21 Browse Download
Acute Myeloid Leukemia LAML 13 Browse Download
Brain Lower Grade Glioma LGG 21 Browse Download
Liver Hepatocellular Carcinoma LIHC 8 Browse Download
Lung Adenocarcinoma LUAD 28 Browse Download
Lung Squamous Cell Carcinoma LUSC 28 Browse Download
Ovarian Serous Cystadenocarcinoma OV 33 Browse Download
Pancreatic Adenocarcinoma PAAD 3 Browse Download
PANCANCER subset with 8 initial disease types PANCAN8 8 Browse Download
Prostate Adenocarcinoma PRAD 18 Browse Download
Rectum Adenocarcinoma READ 28 Browse Download
Sarcoma SARC 1 Browse Download
Skin Cutaneous Melanoma SKCM 18 Browse Download
Stomach Adenocarcinoma STAD 16 Browse Download
Thyroid Adenocarcinoma THCA 18 Browse Download
Uterine Corpus Endometrioid Carcinoma UCEC 28 Browse Download

An archive containing all reports for the 13 September 2012 run is available for download. Links to archives with reports for individual cancer types are included in Table 1.

Methods & Data
  • Run Prefix = analyses__2012_09_13

  • Summary Report Date = Mon Oct 29 22:52:05 2012

  • Protection = FALSE