Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	table.1.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D22V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D11V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D62V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D12V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D43V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D42V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D12V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D62V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D14V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D61V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D37V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D52V7.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D63V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D59V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D43V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D25V7.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D64V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D64V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D64V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D63V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D13V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D63V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D33V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D59V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D33V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D65V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D42V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D45V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D14V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D13V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D59V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D24V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D33V7.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D23V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
cnv2cluster1.sample.gene.table.file	all_lesions.conf_99.txt	gdac.broadinstitute.org_COAD.CopyNumber_Gistic2.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	table.1.txt	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	txt	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D22V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D11V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D62V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D12V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D43V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D42V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D12V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D62V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D14V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D61V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D37V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D52V7.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D63V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D59V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D43V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D25V7.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D64V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D64V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D64V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D63V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D13V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D63V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D33V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D59V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D33V1.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D65V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D42V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D45V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D14V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D13V8.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D59V6.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D24V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D33V7.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	D23V4.png	Correlation-Clinical_Genes_SignificantlyMutated	Level_4	png	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
Correlate_Clinical_Cnvs_onlysig2.clinical.info.file	COAD.clin.merged.picked.txt	gdac.broadinstitute.org_COAD.Clinical_Pick_Tier1.Level_4.2012102400.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00496:12	Correlate_Clinical_vs_CopyNumber_Focal_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_COAD.Correlate_Clinical_vs_CopyNumber_Focal.Level_4.2012102400.0.0	yes
