# Created: Wed Oct 24 14:39:06 EDT 2012 by cgaadm_deadline
# Job: 214479    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: MutSigPreprocess urn:lsid:broadinstitute.org:cancer.genome.analysis:00272:90
# Parameters: 
#    individual_set_id = COAD
#    maf1 = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/COAD/1910000/maf1.input.tsv
#    maf3 = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/COAD/1910000/maf3.input.tsv
#    maflabel1 = Broad
#    maflabel2 = WashU
#    maflabel3 = Baylor
#    wig1 = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/COAD/1910000/wig1.input.tsv
#    wig3 = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/COAD/1910000/wig3.input.tsv
#    build = hg18
#    context65_dir = /xchip/cga1/lawrence/db/context65
#    build_dir = /xchip/cga1/annotation/db/ucsc/hg18
#    num_categories = 4
#    target_list = /xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt
#    paramfile = /xchip/cga1/reference/mutsig_params/MutSig2.0.params.txt
