# Created: Thu Nov 08 12:49:20 EST 2012 by cgaadm_deadline
# Job: 222217    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: mRNAseq_preprocessor urn:lsid:broadinstitute.org:cancer.genome.analysis:10090:23
# Parameters: 
#    hisequnc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergeDataFilesPipeline/COAD/1971040/2.GDAC_MergeDataFiles.Finished/COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data.data.txt
#    outputprefix = COAD
#    ga2unc = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergeDataFilesPipeline/COAD/1971040/2.GDAC_MergeDataFiles.Finished/COAD.rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data.data.txt
#    hisequnc2 = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergeDataFilesPipeline/COAD/1971044/2.GDAC_MergeDataFiles.Finished/COAD.rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data.data.txt
#    hisequnc2raw = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MergeDataFilesPipeline/COAD/1971033/2.GDAC_MergeDataFiles.Finished/COAD.rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data.data.txt
