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"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-14-1455-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-14-1455-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-14-1455-01.wig.txt"
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"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-14-1823-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-14-1823-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-14-1823-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-14-1825-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-14-1825-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-14-1825-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-14-1827-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-14-1827-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-14-1827-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-14-1829-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-14-1829-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-14-1829-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-14-2554-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-14-2554-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-14-2554-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-14-3477-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-14-3477-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-14-3477-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-15-0742-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-15-0742-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-15-0742-01.wig.txt"
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"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-16-0846-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-16-0846-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-16-0846-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-16-0848-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-16-0848-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-16-0848-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-16-0849-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-16-0849-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-16-0849-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-16-0850-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-16-0850-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-16-0850-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-16-0861-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-16-0861-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-16-0861-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-16-1045-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-16-1045-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-16-1045-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-0957-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-0957-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-0957-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-1385-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-1385-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-1385-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-1386-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-1386-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-1386-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-1387-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-1387-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-1387-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-1388-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-1388-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-1388-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-1389-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-1389-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-1389-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-1390-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-1390-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-1390-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-1786-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-1786-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-1786-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-1787-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-1787-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-1787-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-1788-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-1788-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-1788-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-1789-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-1789-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-1789-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-1791-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-1791-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-1791-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-2619-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-2619-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-2619-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-2620-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-2620-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-2620-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-2621-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-2621-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-2621-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-2623-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-2623-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-2623-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-2624-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-2624-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-2624-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-2625-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-2625-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-2625-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-2629-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-2629-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-2629-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-5959-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-5959-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-5959-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-19-5960-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-19-5960-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-19-5960-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-26-1442-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-26-1442-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-26-1442-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-26-1799-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-26-1799-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-26-1799-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-26-5132-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-26-5132-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-26-5132-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-26-5133-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-26-5133-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-26-5133-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-26-5134-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-26-5134-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-26-5134-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-26-5135-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-26-5135-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-26-5135-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-26-5136-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-26-5136-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-26-5136-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-26-5139-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-26-5139-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-26-5139-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-27-1830-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-27-1830-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-27-1830-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-27-1831-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-27-1831-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-27-1831-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-27-1832-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-27-1832-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-27-1832-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-27-1833-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-27-1833-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-27-1833-01.wig.txt"
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"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-27-1835-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-27-1835-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-27-1835-01.wig.txt"
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"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-2499-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-2499-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-2499-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-2501-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-2501-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-2501-01.wig.txt"
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"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-2506-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-2506-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-2506-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-2509-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-2509-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-2509-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-2510-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-2510-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-2510-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-2513-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-2513-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-2513-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-2514-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-2514-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-2514-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-5204-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-5204-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-5204-01.wig.txt"
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"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-5208-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-5208-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-5208-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-5209-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-5209-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-5209-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-5213-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-5213-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-5213-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-5214-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-5214-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-5214-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-5215-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-5215-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-5215-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-5216-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-5216-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-5216-01.wig.txt"
"/xchip/cga1/lawrence/capture/RefSeq_exons_hg18_june2010_fix1.txt" "/xchip/cga1/lawrence/db/context65/all.fwb" 1 65 "GBM-28-5218-TP" "hg18" "/xchip/cga1/annotation/db/ucsc/hg18" "GBM-28-5218-TP.somatic_coverage.txt" "/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.1.4.0/TCGA-28-5218-01.wig.txt"
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