Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
bar_plot	STAD.bargraphs.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
breakdown_table	STAD.mutation_breakdown.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
categories_table	STAD.mutation_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coverage.png	STAD.covplot.png	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
sig_table	STAD.sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table	STAD.cosmic_sig_genes.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_table2	STAD.cosmic_sig_genes2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cosmic_muts_table	STAD.cosmic_mutations.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
cluster_table	STAD.clustered_muts.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
geneset_table	STAD.sig_genesets.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
genset_table2	STAD.sig_genesets_2.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
patients_c_and_r	STAD.patients.counts_and_rates.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mutsig_version	STAD.MutSig_version.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_png	STAD_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
coMut_plot_pdf	STAD_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_STAD.GenerateStickFigures2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_STAD.GenerateStickFigures2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_STAD.GenerateStickFigures2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_STAD.GenerateStickFigures2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_STAD.GenerateStickFigures2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_STAD.GenerateStickFigures2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
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maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
maf_path	STAD.final_analysis_set.maf	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_pre_rep_path	STAD.mutation_preprocessing_report.txt	gdac.broadinstitute.org_STAD.MutSigPreprocess2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	STAD.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ACVR2A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TRIM48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RPL22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAP1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	DNAJC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF48.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	EFNA2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	NSF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HPGDS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	INO80E.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	FGF22.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	OR8H3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	ZNF804B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	TUSC3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	PRRT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	C17orf63.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	HLA-A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	UPF3A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	CCDC43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
mut_filt_rep_path	STAD.mutation_filtering_report.txt	gdac.broadinstitute.org_STAD.MutSigRun2.0.Level_4.2012102400.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012102400	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD.MutSigNozzleReport2.0.Level_4.2012102400.0.0	yes
