Ovarian Serous Cystadenocarcinoma: Clustering of RPPA data: consensus hierarchical
Maintained by TCGA GDAC Team
(Broad Institute/Dana-Farber Cancer Institute/Harvard Medical School)
Overview
Introduction
Summary
The 150 most variable proteins were selected. Consensus average linkage hierarchical clustering of 412 samples and 150 proteins identified 4 subtypes with the stability of the clustering increasing for k = 2 to k = 8 and the average silhouette width calculation for selecting the robust clusters.
Results
Protein expression patterns of molecular subtypes
Consensus and correlation matrix
Silhouette widths
Samples assignment with silhouette width
Marker proteins of each subtype
Methods & Data
Copyright © 2012
Broad Institute TCGA GDAC as part of the TCGA Research Network.
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