# Created: Fri Jan 11 00:51:23 EST 2013 by cgaadm_deadline
# Job: 286628    server:  http://tcga-gdac-genepattern.broadinstitute.org:8090/gp/
# Module: ProcessCoverageForMutSig urn:lsid:broadinstitute.org:cancer.genome.analysis:00188:77
# Parameters: 
#    coverage_prepare_file = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/PRAD-TP/2284055/0.MutSigPreprocess.Finished/PRAD-TP.coverage.prepare.txt
#    patient_list = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/PRAD-TP/2284055/0.MutSigPreprocess.Finished/PRAD-TP.patients.txt
#    mutation_list = file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSigPreprocess/PRAD-TP/2284055/0.MutSigPreprocess.Finished/PRAD-TP.maf
