Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
bar_plot	THCA-TP.bargraphs.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
breakdown_table	THCA-TP.mutation_breakdown.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
categories_table	THCA-TP.mutation_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coverage.png	THCA-TP.covplot.png	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
sig_table	THCA-TP.sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table	THCA-TP.cosmic_sig_genes.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_table2	THCA-TP.cosmic_sig_genes2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cosmic_muts_table	THCA-TP.cosmic_mutations.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
cluster_table	THCA-TP.clustered_muts.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
geneset_table	THCA-TP.sig_genesets.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
genset_table2	THCA-TP.sig_genesets_2.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
patients_c_and_r	THCA-TP.patients.counts_and_rates.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mutsig_version	THCA-TP.MutSig_version.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_png	THCA-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
coMut_plot_pdf	THCA-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
stick_figures_path	generatedStickFigurePaths.txt	gdac.broadinstitute.org_THCA-TP.GenerateStickFigures2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
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maf_path	THCA-TP.final_analysis_set.maf	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
maf_path	THCA-TP.final_analysis_set.maf	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
maf_path	THCA-TP.final_analysis_set.maf	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
maf_path	THCA-TP.final_analysis_set.maf	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_pre_rep_path	THCA-TP.mutation_preprocessing_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigPreprocess2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_breakdown.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.mutation_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.clustered_muts.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.sig_genesets_2.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.cosmic_mutations.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	THCA-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	BRAF.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	NRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	HRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PTTG1IP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ACRC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EMG1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	RPTN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	EIF1AX.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF845.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	IL32.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPTC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CCDC15.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	LYPD3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TMCO2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF878.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TG.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SYNPO2L.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	R3HDM2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF479.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC5A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SCUBE2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MUC7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ZNF799.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PPM1D.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	ATAD2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SF3B2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	TROAP.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	SLC26A11.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	MAP3K3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	PRG4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	CHEK2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
mut_filt_rep_path	THCA-TP.mutation_filtering_report.txt	gdac.broadinstitute.org_THCA-TP.MutSigRun2.0.Level_4.2012122100.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:00413:36	MutSigNozzleReport2.0_2012122100	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_THCA-TP.MutSigNozzleReport2.0.Level_4.2012122100.0.0	yes
