Analysis Overview for 21 December 2012
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)

This is the analysis overview for Firehose run "21 December 2012".


Note: These results are offered to the community as an additional reference point, enabling a wide range of cancer biologists, clinical investigators, and genome and computational scientists to easily incorporate TCGA into the backdrop of ongoing research. While every effort is made to ensure that Firehose input data and algorithms are of the highest possible quality, these analyses have not been reviewed by domain experts.

A total of 551 reports are available for analysis run "21 December 2012".

Cancer Types

Table 1.  Click "Browse" to view reports for a cancer type of interest. If you prefer to view reports on your own computer, you may download a ZIP archive containing all reports for a cancer type by clicking "Download".

Cancer Type Abbreviation Reports HTML ZIP
Bladder Urothelial Carcinoma BLCA 23 Browse Download
Breast Invasive Carcinoma BRCA 30 Browse Download
Cervical Squamous Cell Carcinoma CESC 20 Browse Download
Colon Adenocarcinoma COAD 30 Browse Download
Colon/Rectal Adenocarcinoma COADREAD 30 Browse Download
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma DLBC 1 Browse Download
Glioblastoma Multiforme GBM 32 Browse Download
Head and Neck Squamous Cell Carcinoma HNSC 23 Browse Download
Kidney Chromophobe KICH 9 Browse Download
Kidney Renal Clear Cell Carcinoma KIRC 30 Browse Download
Kidney Renal Papillary Cell Carcinoma KIRP 27 Browse Download
Acute Myeloid Leukemia LAML 3 Browse Download
Brain Lower Grade Glioma LGG 26 Browse Download
Liver Hepatocellular Carcinoma LIHC 9 Browse Download
Lung Adenocarcinoma LUAD 30 Browse Download
Lung Squamous Cell Carcinoma LUSC 30 Browse Download
Ovarian Serous Cystadenocarcinoma OV 35 Browse Download
Pancreatic Adenocarcinoma PAAD 7 Browse Download
PANCANCER cohort with 12 disease types PANCAN12 4 Browse Download
PANCANCER cohort with 18 disease types PANCAN18 3 Browse Download
Prostate Adenocarcinoma PRAD 20 Browse Download
Rectum Adenocarcinoma READ 30 Browse Download
Sarcoma SARC 5 Browse Download
Skin Cutaneous Melanoma SKCM 23 Browse Download
Stomach Adenocarcinoma STAD 18 Browse Download
Thyroid Adenocarcinoma THCA 23 Browse Download
Uterine Corpus Endometrioid Carcinoma UCEC 30 Browse Download

An archive containing all reports for the 21 December 2012 run is available for download. Links to archives with reports for individual cancer types are included in Table 1.

Methods & Data
  • Run Prefix = analyses__2012_12_21

  • Summary Report Date = Fri Jan 25 11:13:18 2013

  • Protection = FALSE