		Clinical Features	Time to Death		AGE		GENDER		PATHOLOGY.T		PATHOLOGY.N		TUMOR.STAGE		RADIATIONS.RADIATION.REGIMENINDICATION		NUMBERPACKYEARSSMOKED		STOPPEDSMOKINGYEAR		TOBACCOSMOKINGHISTORYINDICATOR		YEAROFTOBACCOSMOKINGONSET	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q	t-test_P	t-test_Q	Fisher's exact test_P	Fisher's exact test_Q	t-test_P	t-test_Q
1p gain	11 (4%)	298	0.77069	1	0.54123	1	0.075863	1	0.34274	1	0.74493	1	0.89142	1	1	1	0.41364	1	0.10609	1	0.017443	1	0.89173	1
1q gain	39 (13%)	270	0.98016	1	0.90835	1	0.56925	1	0.16894	1	0.013747	1	0.17318	1	0.23127	1	0.9382	1	0.21443	1	0.52966	1	0.63996	1
2p gain	30 (10%)	279	0.70429	1	0.9068	1	0.39734	1	0.87313	1	0.79347	1	0.57395	1	0.65848	1	0.017722	1	0.32089	1	0.14603	1	0.84608	1
2q gain	20 (6%)	289	0.7765	1	0.92488	1	0.60614	1	0.84579	1	0.86695	1	0.95295	1	1	1	0.080476	1	0.067336	1	0.056778	1	0.62376	1
3p gain	27 (9%)	282	0.16931	1	0.61322	1	0.36863	1	0.64873	1	0.57585	1	0.78199	1	0.49214	1	0.14653	1	0.17933	1	0.044127	1	0.44856	1
3q gain	102 (33%)	207	0.33386	1	0.37783	1	0.077454	1	0.8541	1	0.35448	1	0.20969	1	0.0030598	1	0.21259	1	0.43152	1	0.96081	1	0.9382	1
4p gain	13 (4%)	296	0.6485	1	0.11171	1	0.75513	1	0.82963	1	0.57016	1	0.39814	1	0.31968	1	0.56751	1	0.14006	1	0.81184	1	0.98306	1
4q gain	9 (3%)	300	0.56991	1	0.79213	1	1	1	0.23003	1	0.57778	1	0.37984	1	1	1	0.6247	1	0.13204	1	0.33301	1	0.50589	1
5p gain	77 (25%)	232	0.73254	1	0.23743	1	0.10337	1	0.97906	1	0.88004	1	0.561	1	0.22436	1	0.34774	1	0.4955	1	0.66478	1	0.28491	1
5q gain	27 (9%)	282	0.40182	1	0.93909	1	0.65448	1	0.68483	1	0.72706	1	0.08601	1	0.348	1	0.10749	1	0.7245	1	0.84643	1	0.62065	1
6p gain	26 (8%)	283	0.45452	1	0.10241	1	1	1	0.78192	1	0.41494	1	0.53986	1	0.03412	1	0.57105	1	0.4726	1	0.76736	1	0.55875	1
6q gain	19 (6%)	290	0.69052	1	0.40716	1	0.60593	1	0.31773	1	0.24094	1	0.14476	1	0.052071	1	0.78	1	0.9791	1	0.92005	1	0.37352	1
7p gain	70 (23%)	239	0.44633	1	0.058574	1	0.44515	1	0.93282	1	0.89219	1	0.8059	1	1	1	0.37696	1	0.17728	1	0.71991	1	0.54322	1
7q gain	44 (14%)	265	0.43981	1	0.79815	1	0.58401	1	0.4106	1	0.40982	1	0.30726	1	1	1	0.11659	1	0.083327	1	0.6959	1	0.64868	1
8p gain	48 (16%)	261	0.017597	1	0.7281	1	0.21573	1	0.22385	1	0.47723	1	0.50331	1	0.58739	1	0.81983	1	0.013345	1	0.033391	1	0.86127	1
8q gain	124 (40%)	185	0.074943	1	0.1324	1	0.89668	1	0.2699	1	0.22198	1	0.49583	1	1	1	0.75512	1	0.11031	1	0.20269	1	0.33673	1
9p gain	37 (12%)	272	0.29593	1	0.22233	1	0.16642	1	0.84327	1	0.21238	1	0.56545	1	0.83893	1	0.15581	1	0.67099	1	0.2246	1	0.71391	1
9q gain	44 (14%)	265	0.45736	1	0.086471	1	0.7162	1	0.31514	1	0.79827	1	0.58599	1	0.4502	1	0.48141	1	0.5474	1	0.15106	1	0.31022	1
10p gain	12 (4%)	297	0.99699	1	0.69062	1	0.52349	1	0.63234	1	0.40729	1	1	1	0.49785	1	0.36866	1	0.27088	1	0.31373	1	0.16326	1
10q gain	6 (2%)	303	0.07362	1	0.47701	1	1	1	0.41741	1	1	1	0.76962	1	0.034046	1	0.50082	1	NA	NA	1	1	0.20058	1
11p gain	16 (5%)	293	0.65435	1	0.16857	1	1	1	0.16958	1	0.45719	1	0.31417	1	0.55353	1	0.97313	1	0.032753	1	0.39964	1	0.72806	1
11q gain	16 (5%)	293	0.75207	1	0.21371	1	0.3878	1	0.66548	1	0.93099	1	0.49264	1	0.55353	1	0.91927	1	0.0081031	1	0.035588	1	0.87065	1
12p gain	60 (19%)	249	0.17777	1	0.35178	1	0.19678	1	0.53382	1	0.64314	1	0.90055	1	0.40698	1	0.29014	1	0.23193	1	0.41039	1	0.71887	1
12q gain	25 (8%)	284	0.25865	1	0.95273	1	0.099542	1	0.87466	1	0.75169	1	0.7368	1	0.34474	1	0.21873	1	0.62396	1	0.080973	1	0.26673	1
13q gain	17 (6%)	292	0.68655	1	0.94076	1	0.78495	1	0.46616	1	0.065428	1	0.25788	1	1	1	0.53748	1	0.56467	1	0.75808	1	0.81123	1
14q gain	51 (17%)	258	0.84281	1	0.89322	1	0.3029	1	1	1	0.3286	1	0.62702	1	0.28508	1	0.16957	1	0.0071561	1	0.38646	1	0.6294	1
15q gain	13 (4%)	296	0.8553	1	0.79462	1	0.75513	1	0.057724	1	0.69068	1	0.27146	1	0.19859	1	0.19551	1	0.31667	1	0.55262	1	0.12713	1
16p gain	20 (6%)	289	0.82773	1	0.0021764	1	1	1	1	1	0.017764	1	0.2878	1	0.79092	1	0.74183	1	0.66534	1	0.65747	1	0.14941	1
16q gain	26 (8%)	283	0.85138	1	0.12793	1	1	1	0.71146	1	0.09773	1	0.53224	1	1	1	0.42189	1	0.68051	1	0.68021	1	0.8354	1
17p gain	18 (6%)	291	0.69211	1	0.7728	1	0.17078	1	0.24369	1	0.81408	1	0.31583	1	0.77914	1	0.8666	1	0.14045	1	0.54877	1	0.27117	1
17q gain	20 (6%)	289	0.99588	1	0.7789	1	0.29914	1	0.0099638	1	0.11921	1	0.088785	1	1	1	0.33698	1	0.76936	1	0.023454	1	0.6918	1
18p gain	50 (16%)	259	0.29478	1	0.41401	1	0.00044829	0.386	0.011648	1	0.60343	1	0.028728	1	0.28406	1	0.18721	1	0.25951	1	0.30721	1	0.7636	1
18q gain	20 (6%)	289	0.042233	1	0.72664	1	0.11551	1	0.68879	1	0.71426	1	0.85805	1	1	1	0.36277	1	0.50659	1	0.22401	1	0.46508	1
19p gain	11 (4%)	298	0.033003	1	0.16539	1	1	1	0.42288	1	0.6393	1	0.46972	1	0.73505	1	0.83726	1	0.88467	1	0.61611	1	0.56442	1
19q gain	21 (7%)	288	0.21996	1	0.65469	1	0.80536	1	0.1089	1	0.23798	1	0.33213	1	0.793	1	0.7493	1	0.10187	1	0.26248	1	0.83064	1
20p gain	64 (21%)	245	0.11496	1	0.17263	1	0.52903	1	0.45554	1	0.19003	1	0.24914	1	0.0091965	1	0.24259	1	0.12567	1	0.33326	1	0.96095	1
20q gain	69 (22%)	240	0.51464	1	0.022693	1	0.16811	1	0.45709	1	0.40017	1	0.54828	1	0.006612	1	0.4696	1	0.12379	1	0.22699	1	0.48107	1
21q gain	9 (3%)	300	0.91175	1	0.11554	1	1	1	0.91288	1	0.86335	1	0.48104	1	1	1	0.93369	1	0.99373	1	0.015063	1	0.44374	1
22q gain	38 (12%)	271	0.42282	1	0.19115	1	0.43914	1	0.94604	1	0.20655	1	0.80449	1	1	1	0.060352	1	0.10006	1	0.46227	1	0.31485	1
Xq gain	21 (7%)	288	0.052796	1	0.44314	1	0.45716	1	0.39752	1	0.098991	1	0.9219	1	0.793	1	0.14979	1	0.041432	1	0.8435	1	0.70708	1
1p loss	16 (5%)	293	0.23603	1	0.10413	1	0.57083	1	0.013463	1	0.38481	1	0.30288	1	0.23644	1	0.0055164	1	0.011123	1	0.058253	1	0.51434	1
2p loss	5 (2%)	304	0.28176	1	0.97474	1	0.6157	1	0.52209	1	0.60097	1	0.37612	1	0.59978	1	0.57143	1	0.082545	1	0.50579	1	0.85315	1
2q loss	9 (3%)	300	0.2386	1	0.68792	1	0.70796	1	0.095443	1	0.29625	1	0.11886	1	0.46139	1	0.13487	1	NA	NA	0.24603	1	0.83608	1
3p loss	120 (39%)	189	0.0063024	1	0.88346	1	0.0024862	1	0.38417	1	0.053031	1	0.48133	1	1	1	0.024707	1	0.51119	1	0.12739	1	0.050385	1
3q loss	21 (7%)	288	0.28155	1	0.38783	1	0.21007	1	0.35396	1	0.14702	1	0.29125	1	0.6095	1	0.70183	1	0.046473	1	0.38964	1	0.22186	1
4p loss	76 (25%)	233	0.12927	1	0.4382	1	0.18389	1	0.18882	1	0.53511	1	0.10919	1	0.87924	1	0.084903	1	0.0019579	1	0.0012827	1	0.60164	1
4q loss	50 (16%)	259	0.92161	1	0.66436	1	1	1	0.27063	1	0.61112	1	0.44698	1	0.59097	1	0.19256	1	0.058841	1	0.37205	1	0.61337	1
5p loss	10 (3%)	299	0.42362	1	0.20659	1	0.46864	1	0.61211	1	0.71471	1	0.24713	1	0.1268	1	0.81973	1	0.56178	1	0.31633	1	0.59848	1
5q loss	61 (20%)	248	0.33645	1	0.20085	1	0.52062	1	0.30186	1	0.57882	1	0.28757	1	0.86843	1	0.005207	1	0.97898	1	0.043557	1	0.82503	1
6p loss	19 (6%)	290	0.3466	1	0.66652	1	0.29959	1	0.0014404	1	0.61125	1	0.11668	1	0.42464	1	0.22921	1	0.29996	1	0.12402	1	0.94322	1
6q loss	21 (7%)	288	0.77821	1	0.16358	1	0.45716	1	0.016764	1	0.56355	1	0.2164	1	1	1	0.84046	1	0.46344	1	0.65144	1	0.77266	1
7p loss	5 (2%)	304	0.77182	1	0.49846	1	1	1	0.71409	1	1	1	1	1	1	1	0.25599	1	0.15557	1	0.033912	1	0.82745	1
7q loss	9 (3%)	300	0.85107	1	0.80122	1	0.70796	1	0.26858	1	0.57778	1	0.73037	1	0.46139	1	0.46051	1	0.54458	1	0.83052	1	0.93816	1
8p loss	65 (21%)	244	0.037449	1	0.90283	1	1	1	0.01018	1	0.95069	1	0.16806	1	0.74744	1	0.073931	1	0.70046	1	0.78201	1	0.74377	1
8q loss	6 (2%)	303	0.065598	1	0.74123	1	0.19496	1	0.91288	1	0.29625	1	0.48104	1	0.63822	1	0.21652	1	NA	NA	0.60525	1	0.65278	1
9p loss	84 (27%)	225	0.35606	1	0.30089	1	0.31542	1	0.80578	1	0.93443	1	0.48638	1	1	1	0.0071636	1	0.014533	1	0.0096164	1	0.87713	1
9q loss	29 (9%)	280	0.41055	1	0.30503	1	1	1	0.8862	1	0.80222	1	0.30937	1	0.65662	1	0.081085	1	0.74489	1	0.19779	1	0.5981	1
10p loss	45 (15%)	264	0.22654	1	0.31878	1	0.28031	1	0.03332	1	0.65162	1	0.40758	1	0.71104	1	0.08441	1	0.29018	1	0.41239	1	0.78123	1
10q loss	25 (8%)	284	0.39882	1	0.58323	1	0.099542	1	0.29494	1	0.80223	1	0.36271	1	0.63567	1	0.53636	1	0.43622	1	0.23776	1	0.17238	1
11p loss	39 (13%)	270	0.38406	1	0.88513	1	0.441	1	0.65529	1	0.040971	1	0.088835	1	0.55604	1	0.38803	1	0.020454	1	0.096893	1	0.54607	1
11q loss	60 (19%)	249	0.79228	1	0.38681	1	0.022825	1	0.97506	1	0.27665	1	0.36058	1	0.045087	1	0.739	1	0.81791	1	0.74422	1	0.20302	1
12p loss	12 (4%)	297	0.13104	1	0.012897	1	0.1911	1	0.055363	1	0.039676	1	0.24791	1	0.078612	1	0.1371	1	0.6304	1	0.64931	1	0.0070016	1
12q loss	8 (3%)	301	0.64049	1	0.40257	1	0.6878	1	1	1	0.25432	1	1	1	0.41167	1	0.61559	1	NA	NA	0.45189	1	0.43225	1
13q loss	61 (20%)	248	0.59724	1	0.40615	1	0.078861	1	0.70105	1	0.72955	1	0.37299	1	0.61904	1	0.11582	1	0.3726	1	0.070338	1	0.33604	1
14q loss	15 (5%)	294	0.72752	1	0.97623	1	0.37085	1	0.1735	1	0.57016	1	0.36829	1	0.53768	1	0.65515	1	0.61066	1	0.83987	1	0.61407	1
15q loss	23 (7%)	286	0.57596	1	0.61035	1	1	1	0.84342	1	0.46955	1	0.65706	1	0.80589	1	0.83784	1	0.0011849	1	0.48512	1	0.77551	1
16p loss	11 (4%)	298	0.27774	1	0.53938	1	0.73325	1	0.29519	1	0.32492	1	0.62968	1	1	1	0.39035	1	0.33631	1	0.17852	1	0.13334	1
16q loss	25 (8%)	284	0.23112	1	0.80273	1	0.099542	1	0.69209	1	0.94076	1	0.59985	1	0.46659	1	0.82449	1	0.73564	1	0.49156	1	0.29581	1
17p loss	43 (14%)	266	0.56732	1	0.051082	1	0.097237	1	0.17467	1	0.77324	1	0.099619	1	0.44504	1	0.27673	1	0.31342	1	0.27408	1	0.33776	1
17q loss	4 (1%)	305	0.60308	1	0.7077	1	0.57762	1	NA	NA	NA	NA	NA	NA	0.047414	1	0.34235	1	0.0022615	1	0.24576	1	0.66955	1
18p loss	29 (9%)	280	0.87831	1	0.40489	1	0.38237	1	0.79611	1	0.29763	1	0.92889	1	0.65662	1	0.70658	1	0.18758	1	0.66896	1	0.32408	1
18q loss	86 (28%)	223	0.057828	1	0.050827	1	0.25414	1	0.83171	1	0.46536	1	0.74283	1	0.88291	1	0.16507	1	0.00082916	0.714	0.040173	1	0.19072	1
19p loss	26 (8%)	283	0.010846	1	0.73313	1	0.019934	1	0.17791	1	0.10582	1	0.073294	1	0.63742	1	0.14157	1	0.41257	1	0.32758	1	0.10863	1
19q loss	19 (6%)	290	0.059707	1	0.4797	1	0.11316	1	0.0082822	1	0.12838	1	0.020936	1	0.78947	1	0.15991	1	0.0013936	1	0.029906	1	0.56336	1
20p loss	20 (6%)	289	0.76122	1	0.17495	1	0.29914	1	0.62699	1	0.42376	1	0.58436	1	0.79092	1	0.48597	1	0.29209	1	0.32341	1	0.2852	1
20q loss	9 (3%)	300	0.18946	1	0.76054	1	0.12013	1	0.51865	1	1	1	0.85152	1	1	1	0.3541	1	0.97695	1	0.73856	1	0.29753	1
21q loss	53 (17%)	256	0.77561	1	0.076955	1	0.088824	1	0.35463	1	0.0097428	1	1	1	1	1	0.088784	1	0.17292	1	0.90706	1	0.67299	1
22q loss	24 (8%)	285	0.17671	1	0.96787	1	0.33876	1	0.48713	1	0.16289	1	0.25357	1	0.80725	1	0.33432	1	0.7263	1	0.64211	1	0.49814	1
Xq loss	8 (3%)	301	0.53055	1	0.73964	1	0.21972	1	0.62287	1	0.24474	1	0.1644	1	1	1	0.2207	1	0.30869	1	0.60308	1	0.31884	1
