
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

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> source("/xchip/tcga/gdac_prod/applications/tcga-gdac-genepattern/gp-3.2.4-9272/Tomcat/../../taskLib/GDAC_MutSig_Report.36.3965/Mutsig_Report.R")
> result <- main("-L/xchip/tcga/Tools/Nozzle/v1.current", "-dLGG-TP", "-b", "-r", "-c", "-o", "-s/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSig_S2N/LGG-TP/2374596/LGG-TP.sig_genes.txt", "-m", "-t", "-i", "-u", "-g", "-e", "-x", "-v/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSig_S2N/LGG-TP/2374596/LGG-TP.MutSig_version.txt", "-a", "-f", "-h/xchip/cga/gdac-prod/tcga-gdac/jobResults/GenerateStickFigures/LGG-TP/2377139/0.GenerateStickFigures.Finished/generatedStickFigurePaths.txt", "-j/xchip/cga/gdac-prod/tcga-gdac/jobResults/MutSig_S2N/LGG-TP/2374596/LGG-TP.final_analysis_set.maf", "-k", "-n")
> q(save="no")
