Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
pfile	READ-TP.pvalues_0.1.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10199:4	Hotnet_nozzleReport_2013011600	READ-TP.subnetwork_sig_all.txt	significant subnetwork	Level_3	txt	gdac.broadinstitute.org_READ-TP.Hotnet_nozzleReport.Level_3.2013011600.0.0	yes
pfile	READ-TP.pvalues_0.1.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10199:4	Hotnet_nozzleReport_2013011600	nozzle.html	report	Level_3	html	gdac.broadinstitute.org_READ-TP.Hotnet_nozzleReport.Level_3.2013011600.0.0	yes
pfile	READ-TP.pvalues_0.1.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10199:4	Hotnet_nozzleReport_2013011600	nozzle.RData	report	Level_3	RData	gdac.broadinstitute.org_READ-TP.Hotnet_nozzleReport.Level_3.2013011600.0.0	yes
subfile	READ-TP.subnetworks_0.1.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10199:4	Hotnet_nozzleReport_2013011600	READ-TP.subnetwork_sig_all.txt	significant subnetwork	Level_3	txt	gdac.broadinstitute.org_READ-TP.Hotnet_nozzleReport.Level_3.2013011600.0.0	yes
subfile	READ-TP.subnetworks_0.1.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10199:4	Hotnet_nozzleReport_2013011600	nozzle.html	report	Level_3	html	gdac.broadinstitute.org_READ-TP.Hotnet_nozzleReport.Level_3.2013011600.0.0	yes
subfile	READ-TP.subnetworks_0.1.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10199:4	Hotnet_nozzleReport_2013011600	nozzle.RData	report	Level_3	RData	gdac.broadinstitute.org_READ-TP.Hotnet_nozzleReport.Level_3.2013011600.0.0	yes
