| GDAC_mergedClustering1 mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661176/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COADREAD-TP/2661173/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2662198/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661437/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mergedfile | COADREAD-TP |
| GDAC_mergedClustering1 PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661113/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2661117/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661114/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2661111/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661124/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| GDAC_mergedClustering1 miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2661125/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| Execution Times: | |
| Submitted: | 22:21:40 04-03-13 |
| Completed: | |
| Elapsed: | 00 hrs 00 mins 24 secs |
step 1. GDAC_mergedClustering [id: 335640] merge all clustering result
urn:lsid:broadinstitute.org:cancer.genome.analysis:00253:22
| mrnacnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661176/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| mrnahc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_ConsensusClusteringPipeline/COADREAD-TP/2661173/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| mirnacnmf | |
| mirnahc | |
| copynumber | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2662198/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| methlyationhc | |
| methlyationcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661437/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| mergedfile | COADREAD-TP |
| PredictionU133aTCGA | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661113/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| PredictionU133aPhilips | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2661117/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| PredictionUNCTCGA | |
| mRNAseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661114/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| mRNAseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2661111/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| miRseqcnmf | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CnmfIntegratedPipeline/COADREAD-TP/2661124/3.GDAC_CNMFselectcluster.Finished/COADREAD-TP.bestclus.txt |
| miRseqhc | file:/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_RNAseq_ConsensusClusteringPipeline/COADREAD-TP/2661125/3.GDAC_selectBestcluster.Finished/COADREAD-TP.bestclus.txt |
| Output Files: | |
| COADREAD-TP.transferedmergedcluster.txt | |
| COADREAD-TP.mergedcluster.txt | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 22:21:40 04-03-13 |
| Completed: | 22:21:48 04-03-13 |
| Elapsed: | 00 hrs 00 mins 08 secs |
step 2. GDAC_mergedReport [id: 335641]
urn:lsid:broadinstitute.org:cancer.genome.analysis:00254:3
| mergedcluster | COADREAD-TP.transferedmergedcluster.txt |
| Output Files: | |
| report.html | |
| .lsf.out | |
| stdout.txt | |
| Execution Times: | |
| Submitted: | 22:21:40 04-03-13 |
| Completed: | 22:22:03 04-03-13 |
| Elapsed: | 00 hrs 00 mins 23 secs |